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Overview

ID MAG00335
Name CMS1_bin.15
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Pseudomonadales
Family Balneatricaceae
Genus Amphritea
Species Amphritea sp018223185
Assembly information
Completeness (%) 100.0
Contamination (%) 3.48
GC content (%) 51.0
N50 (bp) 8,113
Genome size (bp) 3,652,281

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3618

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_100003_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 8.463e-230 713.0
CMS1_k127_100003_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 424.0
CMS1_k127_101804_0 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1154.0
CMS1_k127_101804_1 malate quinone oxidoreductase K00116 - 1.1.5.4 2.516e-289 892.0
CMS1_k127_101804_10 Protein of unknown function (DUF3301) - - - 0.00000000000000000000000000000000000000000000000001068 182.0
CMS1_k127_101804_11 Rhodanese Homology Domain - - - 0.00000000000000000000001094 102.0
CMS1_k127_101804_2 methyl-accepting chemotaxis protein K03406 - - 2.097e-233 733.0
CMS1_k127_101804_3 alcohol dehydrogenase K19954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 608.0
CMS1_k127_101804_4 S-adenosylmethionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 565.0
CMS1_k127_101804_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 451.0
CMS1_k127_101804_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 414.0
CMS1_k127_101804_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000365 287.0
CMS1_k127_101804_8 Chemoreceptor zinc-binding domain K13069 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000002926 259.0
CMS1_k127_101804_9 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000000000000000000000000000000004883 213.0
CMS1_k127_1018539_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 6.481e-306 943.0
CMS1_k127_1018539_1 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 498.0
CMS1_k127_1018539_2 PFAM binding-protein-dependent transport systems inner membrane component K17316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 476.0
CMS1_k127_1018539_3 PFAM binding-protein-dependent transport systems inner membrane component K17317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 465.0
CMS1_k127_1018539_4 Porin-like glycoporin RafY - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 353.0
CMS1_k127_1018539_5 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 332.0
CMS1_k127_1018539_6 Sugar ABC transporter substrate-binding protein K17315 - - 0.000000000000000000000000000009006 119.0
CMS1_k127_1018539_7 Belongs to the ABC transporter superfamily K10112 - - 0.000008183 49.0
CMS1_k127_1039956_0 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 501.0
CMS1_k127_1039956_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 303.0
CMS1_k127_1039956_2 pilus assembly protein, PilZ - - - 0.00000000000000000000000000000000000000000000000000000206 194.0
CMS1_k127_1039956_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000002103 174.0
CMS1_k127_1039956_4 - - - - 0.000000000000000000000000000000000007434 137.0
CMS1_k127_10509_0 General secretion pathway protein D K02453 - - 1.199e-248 786.0
CMS1_k127_10509_1 - K02463 - - 0.000000000000004525 83.0
CMS1_k127_10509_2 general secretion pathway protein K02462 - - 0.0000000002685 64.0
CMS1_k127_1053968_0 COG0729 Outer membrane protein K07278 - - 3.493e-196 626.0
CMS1_k127_1053968_1 Belongs to the RimK family K05844 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 355.0
CMS1_k127_1053968_2 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000000000000000228 203.0
CMS1_k127_1054660_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 5.355e-235 728.0
CMS1_k127_1054660_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 551.0
CMS1_k127_1054660_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000006246 258.0
CMS1_k127_1054660_3 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000000000000000083 216.0
CMS1_k127_1054660_4 Iron-sulphur cluster assembly - - - 0.000000000000000000000000000000000005688 137.0
CMS1_k127_1054660_5 Tetratricopeptide repeat K02656 - - 0.0000000000000000000000001181 107.0
CMS1_k127_1054796_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 2.156e-276 855.0
CMS1_k127_1054796_1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 403.0
CMS1_k127_1054796_2 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000002248 163.0
CMS1_k127_1065766_0 Belongs to the thiolase family - - - 6.653e-224 696.0
CMS1_k127_1065766_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 617.0
CMS1_k127_1065766_2 Sodium Bile acid symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 475.0
CMS1_k127_1069781_0 Domain of unknown function (DUF4118) K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 431.0
CMS1_k127_1069781_1 response regulator K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 364.0
CMS1_k127_1150707_0 Glutathione S-transferase K07393 - 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 577.0
CMS1_k127_1150707_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000002639 162.0
CMS1_k127_1150707_2 DoxX K15977 - - 0.00000000000000000000000000000000000003386 147.0
CMS1_k127_1160925_0 Carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 472.0
CMS1_k127_1160925_1 Major facilitator superfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 389.0
CMS1_k127_1160925_2 Cys/Met metabolism PLP-dependent enzyme K14287 - 2.6.1.88 0.0000000000000000000000000000000000000000000000001285 179.0
CMS1_k127_1160925_3 - - - - 0.00000000000000000000000000000000000004228 145.0
CMS1_k127_118165_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1032.0
CMS1_k127_118165_1 Domain of unknown function (DUF3524) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 608.0
CMS1_k127_118165_2 Nitrilase K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 582.0
CMS1_k127_118165_3 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 518.0
CMS1_k127_118165_4 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 427.0
CMS1_k127_118165_5 Transcriptional K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 307.0
CMS1_k127_118165_6 Oxygen tolerance - - - 0.0009165 42.0
CMS1_k127_1185200_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 482.0
CMS1_k127_1185200_1 DUF1338 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 370.0
CMS1_k127_1185200_2 C4-dicarboxylate ABC transporter permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007527 267.0
CMS1_k127_1185200_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000003724 160.0
CMS1_k127_1185200_4 PFAM beta-lactamase domain protein K06167 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016787,GO:0016788,GO:0019634,GO:0019637,GO:0019700,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046434,GO:0046872,GO:0046914,GO:0071704,GO:1901575 3.1.4.55 0.0004828 44.0
CMS1_k127_1212107_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 1.871e-261 807.0
CMS1_k127_1212107_1 - - - - 0.000000000000001496 78.0
CMS1_k127_1212107_2 Peptidase M23 - - - 0.0000000004122 62.0
CMS1_k127_125079_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 3.055e-228 723.0
CMS1_k127_125079_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 4.398e-198 619.0
CMS1_k127_125079_2 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001546 216.0
CMS1_k127_125079_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000001553 213.0
CMS1_k127_125079_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000005785 183.0
CMS1_k127_125079_5 Protein of unknown function (DUF2937) - - - 0.000000000000000000000000005588 113.0
CMS1_k127_1269666_0 Dehydrogenase K15371 - 1.4.1.2 0.0 1369.0
CMS1_k127_1273337_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 1.872e-257 801.0
CMS1_k127_1273337_1 Rieske 2Fe-2S K00479 - - 2.656e-240 743.0
CMS1_k127_1273337_2 Ferredoxin K21832 - - 3.212e-227 706.0
CMS1_k127_1307134_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 1.042e-290 894.0
CMS1_k127_1307134_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 595.0
CMS1_k127_1307134_2 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 567.0
CMS1_k127_1307134_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005349 415.0
CMS1_k127_1307134_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000006297 153.0
CMS1_k127_1329941_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 1.34e-212 662.0
CMS1_k127_1329941_1 Major Facilitator Superfamily - - - 6.496e-202 634.0
CMS1_k127_1329941_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 433.0
CMS1_k127_1329941_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 359.0
CMS1_k127_1329941_5 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 282.0
CMS1_k127_1329941_6 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000004063 172.0
CMS1_k127_1329941_7 - - - - 0.0000000000000000000000000000000000009139 142.0
CMS1_k127_1329941_8 Belongs to the ompA family K03640 - - 0.0000000000000000000000000002939 115.0
CMS1_k127_1337663_0 GAF domain K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 423.0
CMS1_k127_1337663_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008046 378.0
CMS1_k127_1342736_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 481.0
CMS1_k127_1342736_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 409.0
CMS1_k127_1354385_0 ABC transporter ATP-binding protein K06158 - - 0.0 1109.0
CMS1_k127_1354385_1 signal transduction protein - - - 3.934e-216 677.0
CMS1_k127_1354385_2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 415.0
CMS1_k127_1354385_3 Amino acid ABC transporter substrate-binding protein K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001477 268.0
CMS1_k127_1354385_4 Protein of unknown function (DUF2390) - - - 0.0000000000000000000000000000000000000000000000002916 181.0
CMS1_k127_1363650_0 ABC transporter permease K02037 - - 0.0 1386.0
CMS1_k127_1363650_1 Phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 596.0
CMS1_k127_1363650_2 Phosphate transport system permease protein K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 521.0
CMS1_k127_1363650_3 membrane protein, required for spore maturation in B.subtilis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 417.0
CMS1_k127_1363650_4 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000314 250.0
CMS1_k127_1376362_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 2.531e-275 848.0
CMS1_k127_1376362_1 alanine symporter K03310 - - 4.576e-258 799.0
CMS1_k127_1376362_10 Choline/ethanolamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 470.0
CMS1_k127_1376362_11 Domain of unknown function (DUF1989) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 463.0
CMS1_k127_1376362_12 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 440.0
CMS1_k127_1376362_13 Carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 395.0
CMS1_k127_1376362_14 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 380.0
CMS1_k127_1376362_15 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 329.0
CMS1_k127_1376362_16 XRE family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 328.0
CMS1_k127_1376362_17 AsnC family transcriptional regulator K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 312.0
CMS1_k127_1376362_18 endoribonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000002142 236.0
CMS1_k127_1376362_19 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.000000000000000000000000000000000000002986 147.0
CMS1_k127_1376362_2 D-amino acid dehydrogenase K00285 - 1.4.5.1 1.087e-256 793.0
CMS1_k127_1376362_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.336e-238 741.0
CMS1_k127_1376362_4 Belongs to the serine threonine dehydratase family. DsdA subfamily K01753 - 4.3.1.18 1.088e-218 685.0
CMS1_k127_1376362_5 transcriptional regulator K21826 - - 4.101e-201 628.0
CMS1_k127_1376362_6 Bacterial extracellular solute-binding protein, family 7 - - - 8.136e-195 610.0
CMS1_k127_1376362_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 607.0
CMS1_k127_1376362_8 transcriptional regulator K21699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 589.0
CMS1_k127_1376362_9 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006593 519.0
CMS1_k127_1378386_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 541.0
CMS1_k127_1378386_1 catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 346.0
CMS1_k127_1378386_2 Smr domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 318.0
CMS1_k127_1378386_3 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
CMS1_k127_1378386_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000003075 52.0
CMS1_k127_1378884_0 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 9.29e-238 736.0
CMS1_k127_1378884_1 response regulator K02282,K07692,K07782 - - 0.00000000000000000000000000000000000005482 151.0
CMS1_k127_1378884_2 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.00000000002602 65.0
CMS1_k127_1379303_0 diguanylate cyclase - - - 5.503e-196 619.0
CMS1_k127_1379303_1 Phosphotransferase enzyme family K00899 - 2.7.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 610.0
CMS1_k127_1379303_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 494.0
CMS1_k127_1379303_3 Yip1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 348.0
CMS1_k127_1379303_4 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 302.0
CMS1_k127_1379303_5 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964,K22130 - 4.1.1.104,4.2.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 286.0
CMS1_k127_1379303_6 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000003179 231.0
CMS1_k127_1379303_7 aspartate racemase K01779 - 5.1.1.13 0.00000000000000000000000001069 109.0
CMS1_k127_1391087_0 acetylornithine aminotransferase K00821,K00840 - 2.6.1.11,2.6.1.17,2.6.1.81 5.32e-210 659.0
CMS1_k127_1391087_1 Acetylornithine deacetylase K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 601.0
CMS1_k127_1391087_2 arginine N-succinyltransferase K00673 - 2.3.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 311.0
CMS1_k127_1391087_3 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 280.0
CMS1_k127_1391087_4 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.0000000000000000000000000000000000000000000000000000000000000251 216.0
CMS1_k127_1401216_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.719e-239 745.0
CMS1_k127_1401216_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 367.0
CMS1_k127_1401216_2 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 353.0
CMS1_k127_1401216_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009648 265.0
CMS1_k127_1401216_4 Universal stress protein K06149 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001655 243.0
CMS1_k127_1401216_5 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000003448 169.0
CMS1_k127_1401216_6 protein conserved in bacteria - - - 0.000000000000000000000000007338 111.0
CMS1_k127_1402642_0 UPF0313 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 602.0
CMS1_k127_1402642_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 546.0
CMS1_k127_1402642_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005446 274.0
CMS1_k127_1402642_3 Oxidoreductase-like protein, N-terminal - - - 0.00000000000000004671 82.0
CMS1_k127_1409644_0 helicase superfamily c-terminal domain - - - 4.317e-241 749.0
CMS1_k127_1409644_1 Nucleoside-specific channel-forming protein, Tsx - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 395.0
CMS1_k127_1409644_2 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 377.0
CMS1_k127_1409644_3 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 303.0
CMS1_k127_1409644_4 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 287.0
CMS1_k127_1409644_5 Transcriptional regulator - GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004274 267.0
CMS1_k127_1409644_6 transposase activity K07483 - - 0.0000000000000000000000000000000000000006177 154.0
CMS1_k127_1409644_7 - - - - 0.000000000000000000000000000000006326 128.0
CMS1_k127_1409644_8 COG0402 Cytosine deaminase and related metal-dependent hydrolases K18456 - 3.5.4.32 0.00000000000000000000000000009055 115.0
CMS1_k127_1409644_9 urea transporter K08717 - - 0.00000000000000000000000004043 120.0
CMS1_k127_1417148_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 8.792e-271 836.0
CMS1_k127_1417148_1 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 1.32e-233 725.0
CMS1_k127_1417148_10 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 385.0
CMS1_k127_1417148_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000000000000001446 237.0
CMS1_k127_1417148_12 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002491 237.0
CMS1_k127_1417148_13 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000000000000000000000109 224.0
CMS1_k127_1417148_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
CMS1_k127_1417148_15 Nitrogen regulatory protein P-II - - - 0.0000000000000000000000000000000000000000000000000000000001721 204.0
CMS1_k127_1417148_16 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000003523 168.0
CMS1_k127_1417148_2 Protein of unknown function (DUF3549) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 601.0
CMS1_k127_1417148_3 transcriptional regulator K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 593.0
CMS1_k127_1417148_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 - 2.1.3.3,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 559.0
CMS1_k127_1417148_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 484.0
CMS1_k127_1417148_6 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 463.0
CMS1_k127_1417148_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 441.0
CMS1_k127_1417148_8 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 409.0
CMS1_k127_1417148_9 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 396.0
CMS1_k127_1423219_0 DNA helicase K03654 - 3.6.4.12 0.0 1339.0
CMS1_k127_1423219_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 406.0
CMS1_k127_1423219_2 Uncharacterised protein family (UPF0149) K07039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007209 357.0
CMS1_k127_1423219_3 Glycine zipper 2TM domain K06077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003787 257.0
CMS1_k127_1423219_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000001062 160.0
CMS1_k127_1428111_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1145.0
CMS1_k127_144219_0 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 456.0
CMS1_k127_144219_1 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 342.0
CMS1_k127_144219_2 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 296.0
CMS1_k127_144219_3 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000005546 136.0
CMS1_k127_144918_0 His Kinase A (phosphoacceptor) domain - - - 0.0 2838.0
CMS1_k127_14538_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 9e-256 795.0
CMS1_k127_14538_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 496.0
CMS1_k127_14538_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000002322 182.0
CMS1_k127_14538_3 type III effector - - - 0.0000000000000000000000000000000000000000000000001059 179.0
CMS1_k127_1463295_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 5.815e-208 655.0
CMS1_k127_1463295_1 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 358.0
CMS1_k127_1468904_0 Belongs to the UPF0324 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 491.0
CMS1_k127_1468904_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 440.0
CMS1_k127_1468904_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 286.0
CMS1_k127_1468904_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007458 238.0
CMS1_k127_1468904_4 - - - - 0.000000000000000000000000000000000000000000000000000007281 192.0
CMS1_k127_1468904_5 rRNA (Guanine-N1-)-methyltransferase K00563 - 2.1.1.187 0.00000000000000000000000000000000000000000007564 160.0
CMS1_k127_1468904_6 - - - - 0.000000000000000000000000000000001184 132.0
CMS1_k127_148439_0 Cytochrome c-type biogenesis protein K02198 - - 0.0 1215.0
CMS1_k127_148439_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1146.0
CMS1_k127_148439_10 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.00000000000000001131 83.0
CMS1_k127_148439_2 Cytochrome c-type biogenesis protein K02200 - - 5.477e-203 638.0
CMS1_k127_148439_3 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 525.0
CMS1_k127_148439_4 Thiol disulfide interchange protein K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 332.0
CMS1_k127_148439_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 308.0
CMS1_k127_148439_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 293.0
CMS1_k127_148439_7 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001231 271.0
CMS1_k127_148439_8 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002959 258.0
CMS1_k127_148439_9 Belongs to the UPF0270 family K09898 - - 0.00000000000000000000003226 100.0
CMS1_k127_1523918_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001963 262.0
CMS1_k127_1523918_1 lysine biosynthetic process via aminoadipic acid K00997,K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006520,GO:0006553,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0019878,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.8.7 0.000000000000000000000000000000000005087 145.0
CMS1_k127_152570_0 Cache_2 - - - 4.407e-214 672.0
CMS1_k127_152570_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 358.0
CMS1_k127_153232_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 2.037e-316 971.0
CMS1_k127_153232_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 4.302e-292 898.0
CMS1_k127_153232_10 Nitrate nitrite transporter K02575 - - 0.000000000000000000000832 98.0
CMS1_k127_153232_2 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 1.868e-252 786.0
CMS1_k127_153232_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 1.251e-233 728.0
CMS1_k127_153232_4 belongs to the aldehyde dehydrogenase family - - - 7.345e-208 655.0
CMS1_k127_153232_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 8.17e-196 619.0
CMS1_k127_153232_6 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 557.0
CMS1_k127_153232_7 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 521.0
CMS1_k127_153232_8 belongs to the aldehyde dehydrogenase family K00146 - 1.2.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 483.0
CMS1_k127_153232_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 316.0
CMS1_k127_155321_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1559.0
CMS1_k127_1582715_0 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 351.0
CMS1_k127_1582715_1 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000004865 226.0
CMS1_k127_1582715_2 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000004684 163.0
CMS1_k127_1583999_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 489.0
CMS1_k127_1583999_1 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 432.0
CMS1_k127_1583999_2 Peptidase M22 K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 381.0
CMS1_k127_1583999_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 372.0
CMS1_k127_1583999_4 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000001543 140.0
CMS1_k127_159647_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1423.0
CMS1_k127_159647_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.695e-309 949.0
CMS1_k127_159647_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 1.547e-195 612.0
CMS1_k127_159647_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 569.0
CMS1_k127_159647_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 379.0
CMS1_k127_159647_5 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000007887 246.0
CMS1_k127_159647_6 - - - - 0.0000000000000000000000008777 106.0
CMS1_k127_1602887_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1542.0
CMS1_k127_1602887_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 4.294e-249 771.0
CMS1_k127_1602887_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 445.0
CMS1_k127_1602887_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 327.0
CMS1_k127_1602887_4 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000188 205.0
CMS1_k127_1602887_5 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000000000000000002502 114.0
CMS1_k127_1602887_7 - - - - 0.000001582 49.0
CMS1_k127_1602887_8 - - - - 0.00003359 47.0
CMS1_k127_1606562_0 Flagellar hook protein flgE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 432.0
CMS1_k127_1606562_1 MCP methyltransferase K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 421.0
CMS1_k127_1606562_2 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 302.0
CMS1_k127_1606562_3 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002076 260.0
CMS1_k127_1606562_4 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000000000000000000000000000000000000000002181 236.0
CMS1_k127_1620142_0 Ammonium transporter K03320 - - 3.056e-234 728.0
CMS1_k127_1620142_1 Proteasome subunit K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 351.0
CMS1_k127_1620142_2 Nitrogen regulatory protein P-II K04751,K04752 - - 0.00000000000000000000000000000000000000002704 156.0
CMS1_k127_1620142_3 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000009271 72.0
CMS1_k127_1639491_0 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 8.539e-199 623.0
CMS1_k127_1639491_1 catechol K00446 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 540.0
CMS1_k127_1655136_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1513.0
CMS1_k127_1655136_1 Peptidase family U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 475.0
CMS1_k127_1655136_2 RNA polymerase sigma factor RpoS K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 317.0
CMS1_k127_1657954_0 DnaJ C terminal domain K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 509.0
CMS1_k127_1657954_1 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 378.0
CMS1_k127_1657954_2 TIGRFAM ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 363.0
CMS1_k127_1657954_3 glyoxalase bleomycin resistance protein dioxygenase K20431 - 5.1.3.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 284.0
CMS1_k127_1657954_4 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000395 283.0
CMS1_k127_1657954_5 cobalamin-transporting ATPase activity - - - 0.0000000000000000000000000000000000000001369 166.0
CMS1_k127_1657954_6 MerR HTH family regulatory protein K18997 - - 0.00000000000000000000000000000000000001675 145.0
CMS1_k127_1657954_7 40-residue YVTN family beta-propeller - - - 0.0000000000000000000002882 96.0
CMS1_k127_1669093_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1834.0
CMS1_k127_1669093_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0 1031.0
CMS1_k127_1669093_10 Peroxiredoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 282.0
CMS1_k127_1669093_12 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000000000001363 138.0
CMS1_k127_1669093_2 GHKL domain - - - 2.191e-309 950.0
CMS1_k127_1669093_3 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 6.504e-232 725.0
CMS1_k127_1669093_4 (Lipo)protein K07287 - - 2.782e-198 624.0
CMS1_k127_1669093_5 Permease K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 575.0
CMS1_k127_1669093_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 538.0
CMS1_k127_1669093_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 515.0
CMS1_k127_1669093_8 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 383.0
CMS1_k127_1669093_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 358.0
CMS1_k127_1689213_0 Rhs element Vgr protein K11904 - - 1.371e-312 964.0
CMS1_k127_1689798_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 3.752e-254 791.0
CMS1_k127_1689798_1 Na H antiporter NhaD and related arsenite - - - 1.3e-218 683.0
CMS1_k127_1689798_2 Cytochrome P450 - - - 3.077e-194 611.0
CMS1_k127_1689798_3 Reductase C-terminal K00529,K21738 - 1.18.1.1,1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 462.0
CMS1_k127_1689798_4 Transcriptional regulator K18954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 381.0
CMS1_k127_1689798_5 Ca2 -binding protein (EF-Hand superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001252 252.0
CMS1_k127_1689798_6 Ferredoxin K04755 - - 0.000000000000000000000000000000000000000000006443 167.0
CMS1_k127_1689798_7 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000001496 168.0
CMS1_k127_1689798_8 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0000008455 51.0
CMS1_k127_1691791_0 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 1.34e-216 682.0
CMS1_k127_1691791_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 597.0
CMS1_k127_1691791_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 440.0
CMS1_k127_1718918_0 chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 432.0
CMS1_k127_1718918_1 Chemotaxis protein histidine kinase and related - - - 0.00000000000000000000000000000000006871 135.0
CMS1_k127_1735334_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0 1326.0
CMS1_k127_1735334_1 von Willebrand factor (vWF) type A domain K02448 - - 1.376e-313 969.0
CMS1_k127_1735334_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002519 280.0
CMS1_k127_1735334_11 Cytochrome c oxidase subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 275.0
CMS1_k127_1735334_12 Cytochrome c K02305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006018 272.0
CMS1_k127_1735334_13 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006052 255.0
CMS1_k127_1735334_14 - - - - 0.000000000000000000000000000000000002143 141.0
CMS1_k127_1735334_15 COG1278 Cold shock proteins K03704 - - 0.0000000000000000000000000000000001005 134.0
CMS1_k127_1735334_2 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 1.091e-290 894.0
CMS1_k127_1735334_3 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 605.0
CMS1_k127_1735334_4 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 592.0
CMS1_k127_1735334_5 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 523.0
CMS1_k127_1735334_6 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 503.0
CMS1_k127_1735334_7 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 361.0
CMS1_k127_1735334_8 Crp-like helix-turn-helix domain K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 355.0
CMS1_k127_1735334_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 295.0
CMS1_k127_176244_0 Diguanylate cyclase - - - 5.447e-211 668.0
CMS1_k127_1766976_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 7.332e-244 759.0
CMS1_k127_1766976_1 Peptidase dimerisation domain K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 533.0
CMS1_k127_1766976_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 517.0
CMS1_k127_1766976_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000002123 223.0
CMS1_k127_1766976_4 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000004659 153.0
CMS1_k127_1766976_5 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000001947 88.0
CMS1_k127_1776455_0 haemagglutination activity domain - - - 1.378e-216 680.0
CMS1_k127_1776455_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 1.313e-214 672.0
CMS1_k127_1776817_0 Chemoreceptor zinc-binding domain K13069 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 553.0
CMS1_k127_1776817_1 ferrous iron transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 519.0
CMS1_k127_1776817_2 Aminotransferase class I and II K12252,K14287 - 2.6.1.84,2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 503.0
CMS1_k127_1776817_3 D-alanyl-D-alanine carboxypeptidase K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 481.0
CMS1_k127_1776817_4 aspartate racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 365.0
CMS1_k127_1791954_0 Prolyl oligopeptidase family - - - 3.897e-291 908.0
CMS1_k127_1791954_1 Zn-ribbon-containing protein involved in phosphonate metabolism K06193 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 374.0
CMS1_k127_1791954_2 Iron-sulfur cluster-binding domain K06139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 352.0
CMS1_k127_1791954_3 Belongs to the 'phage' integrase family - - - 0.00000000000000004951 84.0
CMS1_k127_1796502_0 acyl-CoA dehydrogenase K16047 - 1.14.14.12 3.319e-217 679.0
CMS1_k127_1796502_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101,K05713 - 1.13.11.16,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 482.0
CMS1_k127_1796502_2 Serine aminopeptidase, S33 K05714 - 3.7.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 460.0
CMS1_k127_1796502_3 transcriptional regulator K05818 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 342.0
CMS1_k127_1796502_4 hydratase K02554 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0008150,GO:0008152,GO:0008684,GO:0009056,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0046872,GO:0046914 4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 306.0
CMS1_k127_1796502_5 Flavin reductase like domain K00484 - 1.5.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 299.0
CMS1_k127_1799989_0 Glycolate oxidase subunit GlcD K00104 - 1.1.3.15 1.581e-278 860.0
CMS1_k127_1799989_1 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 6.132e-235 734.0
CMS1_k127_1799989_2 4Fe-4S binding domain - - - 1.016e-211 662.0
CMS1_k127_1799989_3 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 504.0
CMS1_k127_1799989_4 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000001408 231.0
CMS1_k127_1799989_5 Universal stress protein - - - 0.000000001915 61.0
CMS1_k127_1812864_0 ABC transporter ATP-binding protein - - - 0.0 1056.0
CMS1_k127_1812864_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000001598 173.0
CMS1_k127_1812864_2 PilZ domain - - - 0.00008226 45.0
CMS1_k127_1818847_0 MarR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003327 273.0
CMS1_k127_1818847_1 pilus assembly protein, PilZ - - - 0.00000000000000000000000000000000000000000000000000000556 193.0
CMS1_k127_1818847_2 - - - - 0.000000000000000000000000000000000007434 137.0
CMS1_k127_1821088_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 9.562e-240 742.0
CMS1_k127_1821088_1 twitching motility protein K02670 - - 1.183e-237 736.0
CMS1_k127_1821088_10 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000002591 120.0
CMS1_k127_1821088_2 twitching motility protein K02669 - - 2.052e-210 655.0
CMS1_k127_1821088_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 460.0
CMS1_k127_1821088_4 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 396.0
CMS1_k127_1821088_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 337.0
CMS1_k127_1821088_6 Dihydroorotase multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 305.0
CMS1_k127_1821088_7 Integral membrane protein K02221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 286.0
CMS1_k127_1821088_8 Domain of unknown function (DUF4426) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001181 243.0
CMS1_k127_1821088_9 DUF167 K09131 - - 0.0000000000000000000000000000000000000000005426 165.0
CMS1_k127_1823944_0 exporters of the RND superfamily K07003 - - 0.0 1013.0
CMS1_k127_1823944_1 - - - - 4.698e-211 661.0
CMS1_k127_1823944_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 447.0
CMS1_k127_1823944_3 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) K00988 - 2.7.7.53 0.00003149 46.0
CMS1_k127_1832595_0 DNA polymerase K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 498.0
CMS1_k127_1832595_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 428.0
CMS1_k127_1832595_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000008912 261.0
CMS1_k127_1837426_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 2012.0
CMS1_k127_1837426_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 7.128e-270 835.0
CMS1_k127_1846533_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1139.0
CMS1_k127_1846533_1 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.0 1043.0
CMS1_k127_1846533_2 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 481.0
CMS1_k127_1846533_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 344.0
CMS1_k127_1846533_4 Membrane-anchoring subunit of succinate dehydrogenase (SDH) K00242 - - 0.0000000000000000000000000000000000000000000000000000000000000000003413 230.0
CMS1_k127_1846533_5 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0008177,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016635,GO:0017004,GO:0020037,GO:0022607,GO:0022900,GO:0034622,GO:0043933,GO:0044085,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0048038,GO:0048039,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0097159,GO:1901363 - 0.000000000000000000000000009453 113.0
CMS1_k127_1848258_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1847.0
CMS1_k127_1848258_1 TonB dependent receptor K02014 - - 0.0 1170.0
CMS1_k127_1848258_11 YnbE-like lipoprotein - - - 0.000000000000000000000000002222 112.0
CMS1_k127_1848258_12 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000002325 93.0
CMS1_k127_1848258_2 Dicarboxylate transport - - - 5.271e-265 837.0
CMS1_k127_1848258_3 protein conserved in bacteria K09760 - - 1.187e-247 772.0
CMS1_k127_1848258_4 Uncharacterized protein conserved in bacteria (DUF2219) - - - 1.194e-205 643.0
CMS1_k127_1848258_5 PFAM O-methyltransferase, family 3 K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 419.0
CMS1_k127_1848258_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 346.0
CMS1_k127_1848258_7 - - - - 0.00000000000000000000000000000000000000000000000000000206 194.0
CMS1_k127_1848258_8 protein conserved in bacteria K09978 - - 0.00000000000000000000000000000000000000000000000131 175.0
CMS1_k127_1848258_9 - - - - 0.00000000000000000000000000000000000000000000008354 170.0
CMS1_k127_1853252_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 2.046e-248 775.0
CMS1_k127_1853252_1 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 541.0
CMS1_k127_1853252_2 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000003579 200.0
CMS1_k127_1867989_0 Ring hydroxylating alpha subunit (catalytic domain) K05599,K22443 - 1.14.12.1,1.14.13.239 6.571e-283 872.0
CMS1_k127_1867989_1 Ring hydroxylating beta subunit K05600 - 1.14.12.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 286.0
CMS1_k127_1867989_2 Oxidoreductase FAD-binding domain K11311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003327 242.0
CMS1_k127_1867989_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000005951 223.0
CMS1_k127_1868425_0 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 375.0
CMS1_k127_1868425_1 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 362.0
CMS1_k127_1868425_2 AraC-like ligand binding domain - - - 0.00000000000000000000000000000007551 128.0
CMS1_k127_1871809_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 489.0
CMS1_k127_1871809_1 C4-dicarboxylate transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 458.0
CMS1_k127_1871809_2 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009215 255.0
CMS1_k127_1871809_3 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666,K18365 - 4.1.3.39,4.1.3.43 0.000000000000000000000000000000000000000000000000000000000000000000000102 240.0
CMS1_k127_1879578_0 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates K01141 - 3.1.11.1 5.248e-281 867.0
CMS1_k127_1879578_1 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 452.0
CMS1_k127_1879578_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002108 263.0
CMS1_k127_1879578_3 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000000000000000000000000000002026 228.0
CMS1_k127_1879578_4 - - - - 0.0004985 49.0
CMS1_k127_1881114_0 Peptidase M23 K19304 - - 1.707e-211 666.0
CMS1_k127_1881114_1 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 578.0
CMS1_k127_1881114_2 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 519.0
CMS1_k127_1881114_3 COG2202 FOG PAS PAC domain K03406,K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 346.0
CMS1_k127_1881114_4 Transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004578 244.0
CMS1_k127_1881114_5 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0002896 45.0
CMS1_k127_1885023_0 Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes K00138 - - 1e-323 992.0
CMS1_k127_1885023_1 FOG PAS PAC domain - - - 3.404e-213 673.0
CMS1_k127_1885023_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 430.0
CMS1_k127_1898672_0 Belongs to the peptidase S16 family - - - 1.053e-272 841.0
CMS1_k127_1903640_0 Putative diguanylate phosphodiesterase K21025 - - 0.0 1045.0
CMS1_k127_1903640_1 COG0457 FOG TPR repeat - - - 1.541e-254 798.0
CMS1_k127_1903640_10 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 325.0
CMS1_k127_1903640_11 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
CMS1_k127_1903640_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001618 256.0
CMS1_k127_1903640_13 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002392 239.0
CMS1_k127_1903640_14 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000002596 226.0
CMS1_k127_1903640_15 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000002326 127.0
CMS1_k127_1903640_16 - - - - 0.00000000000000000004278 89.0
CMS1_k127_1903640_17 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000005216 82.0
CMS1_k127_1903640_18 - - - - 0.000000001291 61.0
CMS1_k127_1903640_19 - - - - 0.0000001111 55.0
CMS1_k127_1903640_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 1.641e-239 744.0
CMS1_k127_1903640_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 9.008e-216 672.0
CMS1_k127_1903640_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 1.37e-207 648.0
CMS1_k127_1903640_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 3.621e-196 614.0
CMS1_k127_1903640_6 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 441.0
CMS1_k127_1903640_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 437.0
CMS1_k127_1903640_8 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 408.0
CMS1_k127_1903640_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 384.0
CMS1_k127_1909300_0 DNA-binding protein VF530 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 289.0
CMS1_k127_1909300_1 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001037 258.0
CMS1_k127_1909300_2 Catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate K07589 - 5.1.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000003898 238.0
CMS1_k127_1909300_3 cation transporter - - - 0.00000004911 59.0
CMS1_k127_1918115_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1410.0
CMS1_k127_1918115_1 Flagellar assembly protein T, middle domain - - - 8.698e-225 700.0
CMS1_k127_1918115_2 Multicopper oxidase K06324 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 524.0
CMS1_k127_1918115_3 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 370.0
CMS1_k127_1918115_4 LPP20 lipoprotein K09860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003574 266.0
CMS1_k127_1918115_5 deoxycytidine triphosphate deaminase K09948 - - 0.000000000000000000000000000000000000000000000000003692 182.0
CMS1_k127_1919841_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1738.0
CMS1_k127_1919841_1 Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate K14267 - 2.6.1.17 9.428e-240 744.0
CMS1_k127_1919841_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 3.921e-234 726.0
CMS1_k127_1919841_3 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 1.347e-207 647.0
CMS1_k127_1919841_4 rRNA (Guanine-N1-)-methyltransferase K00563 - 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 471.0
CMS1_k127_1919841_5 Belongs to the ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000001586 196.0
CMS1_k127_1919841_6 PilZ domain - - - 0.0000000000000000000000000000000000000000181 155.0
CMS1_k127_1926877_0 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 2.546e-216 682.0
CMS1_k127_1926877_1 Required for the activity of the bacterial periplasmic transport system of putrescine K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 480.0
CMS1_k127_1926877_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000001811 145.0
CMS1_k127_1929039_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 0.0 1011.0
CMS1_k127_1929039_1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000003977 143.0
CMS1_k127_1930673_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1196.0
CMS1_k127_1930673_1 of the RND superfamily K07003 - - 0.0 1169.0
CMS1_k127_1930673_10 Sulfatase - - - 1.006e-210 666.0
CMS1_k127_1930673_11 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00626 - 2.3.1.9 6.492e-207 648.0
CMS1_k127_1930673_12 Tripartite ATP-independent periplasmic transporter, DctM component - - - 6.772e-205 656.0
CMS1_k127_1930673_13 GMC oxidoreductase K00108 - 1.1.99.1 1.664e-202 643.0
CMS1_k127_1930673_14 COG2610 H gluconate symporter and related permeases - - - 5.082e-198 627.0
CMS1_k127_1930673_15 TRAP-type C4-dicarboxylate transport system, large permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 612.0
CMS1_k127_1930673_16 Belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 606.0
CMS1_k127_1930673_17 PAS fold K10715,K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 596.0
CMS1_k127_1930673_18 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 569.0
CMS1_k127_1930673_19 Peptidase dimerisation domain K01451 - 3.5.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 524.0
CMS1_k127_1930673_2 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.9 1.229e-282 879.0
CMS1_k127_1930673_20 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 498.0
CMS1_k127_1930673_21 FAD linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 493.0
CMS1_k127_1930673_22 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 484.0
CMS1_k127_1930673_23 von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 478.0
CMS1_k127_1930673_24 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 441.0
CMS1_k127_1930673_25 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 446.0
CMS1_k127_1930673_26 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K05921 - 4.1.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 404.0
CMS1_k127_1930673_27 Iron-containing alcohol dehydrogenase K00005,K00096,K08317 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006066,GO:0006071,GO:0006081,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008888,GO:0009056,GO:0009438,GO:0009987,GO:0015980,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019147,GO:0019400,GO:0019405,GO:0019563,GO:0019588,GO:0019662,GO:0019751,GO:0042180,GO:0042182,GO:0042802,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046185,GO:0051596,GO:0055114,GO:0071704,GO:1901575,GO:1901615,GO:1901616 1.1.1.261,1.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 406.0
CMS1_k127_1930673_28 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 400.0
CMS1_k127_1930673_29 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 374.0
CMS1_k127_1930673_3 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 7.018e-274 846.0
CMS1_k127_1930673_30 Regulatory protein K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 335.0
CMS1_k127_1930673_31 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00032,K00050,K00090 - 1.1.1.215,1.1.1.43,1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 329.0
CMS1_k127_1930673_32 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 328.0
CMS1_k127_1930673_33 hydratase K02509 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 316.0
CMS1_k127_1930673_34 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002307 269.0
CMS1_k127_1930673_35 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000129 269.0
CMS1_k127_1930673_36 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002169 264.0
CMS1_k127_1930673_37 COG2303 Choline dehydrogenase and related flavoproteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001199 260.0
CMS1_k127_1930673_38 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001865 236.0
CMS1_k127_1930673_39 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000007923 241.0
CMS1_k127_1930673_4 Arylsulfatase K01130 - 3.1.6.1 2.521e-269 837.0
CMS1_k127_1930673_40 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003066 240.0
CMS1_k127_1930673_41 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000002227 204.0
CMS1_k127_1930673_42 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000002714 204.0
CMS1_k127_1930673_43 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000186 195.0
CMS1_k127_1930673_44 Universal stress protein family K14055 - - 0.000000000000000000000000000000000000000000000000006979 190.0
CMS1_k127_1930673_45 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000004111 177.0
CMS1_k127_1930673_46 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000000000001072 172.0
CMS1_k127_1930673_47 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000001462 168.0
CMS1_k127_1930673_48 oxygen carrier activity - - - 0.000000000000000000000000000000000007713 154.0
CMS1_k127_1930673_49 transcriptional regulator K16137 - - 0.00000000000000000000000004498 115.0
CMS1_k127_1930673_5 Iron-sulfur cluster-binding domain K06871 - - 1.596e-240 748.0
CMS1_k127_1930673_50 Domain of unknown function (DUF4381) - - - 0.0000000000000000000000005188 111.0
CMS1_k127_1930673_51 cheY-homologous receiver domain - - - 0.000000000000000000002043 107.0
CMS1_k127_1930673_52 NMT1-like family K07080 - - 0.00000000000000000003223 91.0
CMS1_k127_1930673_54 Oxidoreductase - - - 0.00006473 53.0
CMS1_k127_1930673_6 Long-chain fatty acid--CoA ligase K00666 - - 4.828e-233 733.0
CMS1_k127_1930673_7 Protein of unknown function (DUF3604) - - - 8.169e-227 717.0
CMS1_k127_1930673_8 Protein of unknown function (DUF3604) - - - 1.41e-226 717.0
CMS1_k127_1930673_9 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 3.148e-220 696.0
CMS1_k127_1938788_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1241.0
CMS1_k127_1938788_1 Peptidase family M48 - - - 3.534e-219 685.0
CMS1_k127_1938788_2 FAD binding domain K03380 - 1.14.13.7 4.843e-212 661.0
CMS1_k127_1938788_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 561.0
CMS1_k127_1938788_4 transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 364.0
CMS1_k127_1938788_5 Protein of unknown function (DUF501) K09009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 293.0
CMS1_k127_1938788_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005908 277.0
CMS1_k127_1938788_7 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000004849 178.0
CMS1_k127_1939854_0 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 1.269e-235 733.0
CMS1_k127_1939854_1 Histidine kinase K02480 - 2.7.13.3 9.092e-206 648.0
CMS1_k127_1939854_2 chemotaxis, protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 521.0
CMS1_k127_1939854_3 response regulator K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 304.0
CMS1_k127_1939854_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 295.0
CMS1_k127_1962912_0 ABC transporter ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007785 546.0
CMS1_k127_1962912_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 330.0
CMS1_k127_1962912_2 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 284.0
CMS1_k127_1962912_3 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000002385 167.0
CMS1_k127_1970279_0 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 1.156e-226 710.0
CMS1_k127_1970279_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 514.0
CMS1_k127_1970279_2 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 340.0
CMS1_k127_1970279_3 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 336.0
CMS1_k127_1970279_4 glycosyl transferase family - - - 0.0000001731 55.0
CMS1_k127_1974779_0 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 317.0
CMS1_k127_1974779_1 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009014 271.0
CMS1_k127_1974779_2 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000002407 71.0
CMS1_k127_1974779_3 Ceramidase - - - 0.00004913 47.0
CMS1_k127_2013747_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 2.969e-195 610.0
CMS1_k127_2013747_1 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 410.0
CMS1_k127_2013747_2 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 392.0
CMS1_k127_2013747_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 361.0
CMS1_k127_2013747_4 Flagellar hook-length control protein FliK K02414 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002368 265.0
CMS1_k127_2013747_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000000000000000000000000000000002216 237.0
CMS1_k127_2013747_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000008892 238.0
CMS1_k127_2013747_7 Flagellar biosynthesis protein, FliO - - - 0.0000000000000000000000000000000000000000005517 162.0
CMS1_k127_2013747_8 Flagellar biosynthetic protein FliQ K02420 - - 0.000000000000000000000000000000000000000002008 157.0
CMS1_k127_2026143_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 7.38e-281 874.0
CMS1_k127_2026143_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.827e-200 633.0
CMS1_k127_2026143_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 534.0
CMS1_k127_2026143_3 Histidine kinase K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 492.0
CMS1_k127_2026143_4 Sugar ABC transporter substrate-binding protein K17315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 438.0
CMS1_k127_2026143_5 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 379.0
CMS1_k127_2026143_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 286.0
CMS1_k127_2028645_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 9.038e-285 876.0
CMS1_k127_2028645_1 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 2.421e-255 789.0
CMS1_k127_2028645_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 501.0
CMS1_k127_2028645_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 417.0
CMS1_k127_2031427_0 Allantoicase repeat K01477 GO:0003674,GO:0003824,GO:0004037,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.3.4 5.643e-198 618.0
CMS1_k127_2031427_1 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 436.0
CMS1_k127_2031427_2 Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source K01483 - 4.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001569 277.0
CMS1_k127_2043178_0 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0 1597.0
CMS1_k127_2043178_1 AAA domain K03112 - - 0.00000000000000000000000000000000000000000000003498 175.0
CMS1_k127_2044310_0 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95 C K02336 - 2.7.7.7 0.0 1366.0
CMS1_k127_2044310_1 COG4774 Outer membrane receptor for monomeric catechols K16090 - - 7.341e-271 854.0
CMS1_k127_2044310_10 TonB C terminal K03832 - - 0.000000000000000000000004646 111.0
CMS1_k127_2044310_11 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000003184 72.0
CMS1_k127_2044310_12 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000003292 60.0
CMS1_k127_2044310_13 Haloacid dehalogenase-like hydrolase K05306 GO:0003674,GO:0003824 3.11.1.1 0.0000001465 53.0
CMS1_k127_2044310_2 GHMP kinases C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 429.0
CMS1_k127_2044310_3 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 411.0
CMS1_k127_2044310_4 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 297.0
CMS1_k127_2044310_5 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000003229 252.0
CMS1_k127_2044310_6 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000008569 235.0
CMS1_k127_2044310_7 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000001129 228.0
CMS1_k127_2044310_8 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000002972 198.0
CMS1_k127_2044310_9 GHMP kinases N terminal domain - - - 0.00000000000000000000000000001064 119.0
CMS1_k127_2046374_0 belongs to the aldehyde dehydrogenase family K00130,K00151,K10217 - 1.2.1.32,1.2.1.60,1.2.1.8,1.2.1.85 2.17e-319 979.0
CMS1_k127_2046374_1 - - - - 1.894e-215 676.0
CMS1_k127_2046374_2 hydratase K02509 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 514.0
CMS1_k127_2046374_3 Fumarylacetoacetate (FAA) hydrolase family K05921 - 4.1.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 504.0
CMS1_k127_2046374_4 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 498.0
CMS1_k127_2046374_5 Fumarylacetoacetate (FAA) hydrolase family K05921 - 4.1.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 346.0
CMS1_k127_2046374_6 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000007749 246.0
CMS1_k127_2046374_7 ANTAR - - - 0.0000000000002775 76.0
CMS1_k127_2051027_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 478.0
CMS1_k127_2051027_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 439.0
CMS1_k127_2053083_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 322.0
CMS1_k127_2053083_1 Desulfoferrodoxin - - - 0.000000000000000000000000000000000000000000005641 167.0
CMS1_k127_2053083_2 Protein of unknown function (DUF3465) - - - 0.0000000000000000000000000000002089 128.0
CMS1_k127_2061285_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1085.0
CMS1_k127_2061285_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 5.095e-196 621.0
CMS1_k127_2061285_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 441.0
CMS1_k127_2061285_3 MucB/RseB C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 317.0
CMS1_k127_2061285_4 Positive regulator of K03803 - - 0.0000000000000000000000000000000000000000000000000000000000000001172 223.0
CMS1_k127_2070926_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 6.248e-272 840.0
CMS1_k127_2070926_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 551.0
CMS1_k127_2070926_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 491.0
CMS1_k127_2070926_3 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006259 268.0
CMS1_k127_2070926_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000001589 189.0
CMS1_k127_2073601_0 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0 1730.0
CMS1_k127_2078579_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.305e-264 818.0
CMS1_k127_2078579_1 protein conserved in bacteria K09989 - - 6.298e-246 762.0
CMS1_k127_2078579_10 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000001403 149.0
CMS1_k127_2078579_11 - - - - 0.000000000000000000000002434 109.0
CMS1_k127_2078579_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 1.663e-196 614.0
CMS1_k127_2078579_3 ATPase, AAA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 547.0
CMS1_k127_2078579_4 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 488.0
CMS1_k127_2078579_5 protein conserved in bacteria K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 423.0
CMS1_k127_2078579_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 402.0
CMS1_k127_2078579_7 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 351.0
CMS1_k127_2078579_8 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 322.0
CMS1_k127_2078579_9 Protein of unknown function (DUF2956) - - - 0.000000000000000000000000000000000000000009552 156.0
CMS1_k127_2081112_0 to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 549.0
CMS1_k127_2081112_1 universal stress protein - - - 0.00000000000000000000000000000000000000000000000008488 182.0
CMS1_k127_208342_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2525.0
CMS1_k127_208342_1 one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high K00371 - 1.7.5.1 0.0 1068.0
CMS1_k127_208342_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 602.0
CMS1_k127_208342_3 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 440.0
CMS1_k127_208342_4 one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 420.0
CMS1_k127_208342_5 Nitrate reductase delta subunit K00373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 413.0
CMS1_k127_208342_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 370.0
CMS1_k127_208342_7 helix_turn_helix, cAMP Regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 357.0
CMS1_k127_208342_8 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000001555 186.0
CMS1_k127_208342_9 DGC domain - - - 0.00000000000000000000000000000000000001992 150.0
CMS1_k127_208647_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 1.086e-208 655.0
CMS1_k127_208647_1 Luciferase-like monooxygenase - - - 9.345e-201 627.0
CMS1_k127_208647_10 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 402.0
CMS1_k127_208647_11 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 372.0
CMS1_k127_208647_12 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 345.0
CMS1_k127_208647_13 YcdC-like protein, C-terminal region K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 332.0
CMS1_k127_208647_14 cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 326.0
CMS1_k127_208647_15 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000002065 223.0
CMS1_k127_208647_16 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.0000000000000000000000000000000000000000000000000000000000005165 218.0
CMS1_k127_208647_17 membrane - - - 0.000000000000000000000000000000000000000000000000000000001027 202.0
CMS1_k127_208647_18 ThiS family K03154 - - 0.00000000000000000000000001349 109.0
CMS1_k127_208647_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 566.0
CMS1_k127_208647_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 550.0
CMS1_k127_208647_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 516.0
CMS1_k127_208647_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 502.0
CMS1_k127_208647_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 474.0
CMS1_k127_208647_7 Peptidase dimerisation domain K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 456.0
CMS1_k127_208647_8 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 451.0
CMS1_k127_208647_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 437.0
CMS1_k127_2086671_0 Mo-co oxidoreductase dimerisation domain - - - 7.456e-208 653.0
CMS1_k127_2086671_1 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000001059 164.0
CMS1_k127_2089795_0 PFAM Extracellular solute-binding protein, family 3 - - - 2.053e-257 804.0
CMS1_k127_2089795_1 Catalyzes the formation of fumarate from aspartate K01744 - 4.3.1.1 9.388e-242 752.0
CMS1_k127_2089795_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 8.543e-228 713.0
CMS1_k127_2089795_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000006203 130.0
CMS1_k127_2094906_0 xanthine K03458,K16345,K16346 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823 - 3.416e-244 760.0
CMS1_k127_2094906_1 COG0402 Cytosine deaminase and related metal-dependent hydrolases K18456 - 3.5.4.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 376.0
CMS1_k127_2094906_2 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 315.0
CMS1_k127_2094906_3 Radical SAM superfamily K04070 - 1.97.1.4 0.0000000000000000000000000000000186 128.0
CMS1_k127_2094936_0 Oxaloacetate K01960 - 6.4.1.1 3.23e-295 910.0
CMS1_k127_2094936_1 Catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate K01959 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 496.0
CMS1_k127_2099762_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 525.0
CMS1_k127_2099762_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 509.0
CMS1_k127_2099762_2 2OG-Fe dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 411.0
CMS1_k127_2099762_3 Iron-sulfur cluster-binding domain K06139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 354.0
CMS1_k127_2099762_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000001458 211.0
CMS1_k127_2099762_5 response regulator - - - 0.00000000000000000000000000000000000000000000000007061 188.0
CMS1_k127_2105418_0 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 0.0 1704.0
CMS1_k127_2105418_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1381.0
CMS1_k127_2105418_2 FMN_bind K19339 - - 0.0 1297.0
CMS1_k127_2105418_3 Belongs to the DEAD box helicase family K05590 - 3.6.4.13 5.129e-251 778.0
CMS1_k127_2105418_4 Belongs to the DEAD box helicase family - - - 2.539e-242 753.0
CMS1_k127_2105418_5 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 548.0
CMS1_k127_2105418_6 cytochrome K08738 - - 0.00000000000000000000000000000000000000000001834 163.0
CMS1_k127_2110523_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 5.862e-211 662.0
CMS1_k127_2110523_1 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 524.0
CMS1_k127_2110523_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 463.0
CMS1_k127_2110523_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000003895 177.0
CMS1_k127_2110523_4 - - - - 0.0000000000000000000000000000000000000000000004195 168.0
CMS1_k127_2110523_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000189 149.0
CMS1_k127_2110523_6 Belongs to the enoyl-CoA hydratase isomerase family K20036 - 4.2.1.155 0.00002662 48.0
CMS1_k127_2119972_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 382.0
CMS1_k127_2119972_1 Belongs to the enoyl-CoA hydratase isomerase family K20036 - 4.2.1.155 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 379.0
CMS1_k127_2119972_2 acyl-CoA dehydrogenase K20035 - - 0.0000000000000000000000000000000000000000000000000000000000000000001162 234.0
CMS1_k127_2154857_0 Ribonuclease R winged-helix domain K12573 - - 0.0 1383.0
CMS1_k127_2154857_1 Alpha amylase, catalytic domain K00690 - 2.4.1.7 8.009e-283 878.0
CMS1_k127_2154857_2 Glycosyl transferase K13693 - 2.4.1.266 4.137e-233 724.0
CMS1_k127_2154857_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 602.0
CMS1_k127_2154857_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 286.0
CMS1_k127_2154857_5 hydrolase (HAD superfamily) K07026,K15918 - 2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008073 281.0
CMS1_k127_2154857_6 Diguanylate cyclase K20956,K21023 - 2.7.7.65 0.000000000000000000000000000000000000000000000000003397 186.0
CMS1_k127_215899_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1002.0
CMS1_k127_21709_0 UPF0313 protein - - - 1.584e-279 862.0
CMS1_k127_21709_1 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 499.0
CMS1_k127_21709_2 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 421.0
CMS1_k127_21709_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 250.0
CMS1_k127_21709_4 Signal transduction protein - - - 0.000000000000000000000000002108 113.0
CMS1_k127_2171348_0 Histidine kinase - - - 2.678e-313 972.0
CMS1_k127_2171348_1 Bacterial regulatory protein, Fis family K10126 - - 9.988e-218 678.0
CMS1_k127_2171348_2 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 541.0
CMS1_k127_2171348_3 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 437.0
CMS1_k127_2171348_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 312.0
CMS1_k127_2171348_5 General glycosylation pathway protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 304.0
CMS1_k127_2176135_0 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 346.0
CMS1_k127_2176135_1 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 343.0
CMS1_k127_2176135_2 protein conserved in bacteria K09929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 327.0
CMS1_k127_2176135_3 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 308.0
CMS1_k127_2182775_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.601e-259 807.0
CMS1_k127_2182775_1 PFAM H transporting two-sector ATPase gamma subunit K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 404.0
CMS1_k127_2182775_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000289 232.0
CMS1_k127_2182775_3 TIGRFAM channel protein, hemolysin III family K11068 - - 0.000000000000000000000000000000000000000000000000000000000000002671 220.0
CMS1_k127_2182775_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000005144 188.0
CMS1_k127_2182775_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000002691 150.0
CMS1_k127_2198683_0 Amino acid ABC transporter substrate-binding protein K09969 - - 5.332e-210 654.0
CMS1_k127_2198683_1 alanine symporter K03310 - - 0.00000000002586 66.0
CMS1_k127_220031_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 5.066e-319 980.0
CMS1_k127_220031_1 Diguanylate cyclase K13590 - 2.7.7.65 3.769e-214 676.0
CMS1_k127_220031_2 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 333.0
CMS1_k127_220031_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000003294 250.0
CMS1_k127_2212717_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - - 0.0 2182.0
CMS1_k127_2212717_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.749e-287 888.0
CMS1_k127_2212717_2 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 1.59e-225 700.0
CMS1_k127_2212717_3 Iron-storage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 288.0
CMS1_k127_2212717_4 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003544 254.0
CMS1_k127_2212717_5 - - - - 0.000002515 51.0
CMS1_k127_22169_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 460.0
CMS1_k127_2228778_0 involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 541.0
CMS1_k127_2228778_1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 332.0
CMS1_k127_2228778_2 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 325.0
CMS1_k127_2228778_3 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000114 47.0
CMS1_k127_2246329_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K00455 - 1.13.11.15 1.113e-194 608.0
CMS1_k127_2246329_1 Divalent cation transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 491.0
CMS1_k127_2246329_2 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 364.0
CMS1_k127_2246329_3 Helix-turn-helix - - - 0.0000000000000000000000000000000000001642 143.0
CMS1_k127_2246329_4 Pfam:HipA_N K07154 - 2.7.11.1 0.00000000000136 70.0
CMS1_k127_2254861_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 4.423e-320 998.0
CMS1_k127_2254861_1 FAD-NAD(P)-binding K18277 - 1.14.13.148 2.146e-269 832.0
CMS1_k127_2254861_2 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001265 276.0
CMS1_k127_2254861_3 Ammonium transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000006837 227.0
CMS1_k127_2254861_4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005424 228.0
CMS1_k127_2254861_5 COG3850 Signal transduction histidine kinase, nitrate nitrite-specific K07673 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000009782 234.0
CMS1_k127_2254861_6 Protein of unknown function (DUF861) K06995 - - 0.0000000000000000000000000000000000000000000003007 169.0
CMS1_k127_2254861_7 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000005268 69.0
CMS1_k127_2291574_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 360.0
CMS1_k127_2291574_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003347 246.0
CMS1_k127_2308661_0 redox protein, regulator of disulfide bond formation - - - 3.034e-288 893.0
CMS1_k127_2308661_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 508.0
CMS1_k127_2308661_2 - - - - 0.000000000000000000000000000000000000000000000000005029 182.0
CMS1_k127_2308661_3 Alpha/beta hydrolase family K06889 - - 0.000000001039 59.0
CMS1_k127_2324230_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.0 1834.0
CMS1_k127_2324230_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03169 - 5.99.1.2 0.0 1105.0
CMS1_k127_2324230_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 6.551e-292 907.0
CMS1_k127_2324230_3 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 290.0
CMS1_k127_2324230_4 Bacterial SH3 domain homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001381 282.0
CMS1_k127_2324230_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001012 273.0
CMS1_k127_2324230_6 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000001002 241.0
CMS1_k127_2324230_7 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000001531 224.0
CMS1_k127_2324230_8 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000000000000000001486 211.0
CMS1_k127_2324230_9 Glutaredoxin K03674 - - 0.0000000000000000000000000000000000000000000005811 166.0
CMS1_k127_232787_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1265.0
CMS1_k127_232787_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000002399 141.0
CMS1_k127_233776_0 Histidine kinase - - - 0.0 1566.0
CMS1_k127_233776_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 446.0
CMS1_k127_233776_2 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000215 280.0
CMS1_k127_233776_3 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000005094 224.0
CMS1_k127_233776_4 regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000003232 221.0
CMS1_k127_233776_5 - - - - 0.000000126 56.0
CMS1_k127_2338101_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01469,K01473,K10855 - 3.5.2.14,3.5.2.9,6.4.1.6 0.0 1244.0
CMS1_k127_2338101_1 Hydantoinase B/oxoprolinase K01474,K10854 - 3.5.2.14,6.4.1.6 0.0 1024.0
CMS1_k127_2338101_10 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000001505 123.0
CMS1_k127_2338101_2 allantoin - - - 1.153e-249 775.0
CMS1_k127_2338101_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.078e-241 752.0
CMS1_k127_2338101_4 Bacterial extracellular solute-binding protein, family 7 - - - 3.468e-201 629.0
CMS1_k127_2338101_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 501.0
CMS1_k127_2338101_6 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 436.0
CMS1_k127_2338101_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 348.0
CMS1_k127_2338101_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 319.0
CMS1_k127_2370078_0 protein conserved in bacteria K09800 - - 7.411e-315 1007.0
CMS1_k127_2370078_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 596.0
CMS1_k127_2370078_10 COG0729 Outer membrane protein K07278 - - 0.000000000000000000000000002267 111.0
CMS1_k127_2370078_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 469.0
CMS1_k127_2370078_3 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 443.0
CMS1_k127_2370078_4 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 443.0
CMS1_k127_2370078_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 366.0
CMS1_k127_2370078_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 287.0
CMS1_k127_2370078_7 transcriptional regulator K11475 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003361 263.0
CMS1_k127_2370078_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003711 234.0
CMS1_k127_2370078_9 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002225 226.0
CMS1_k127_23767_0 Acyltransferase - - - 3.293e-202 634.0
CMS1_k127_23767_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 548.0
CMS1_k127_23767_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106 520.0
CMS1_k127_23767_3 YcdC-like protein, C-terminal region K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 293.0
CMS1_k127_23767_4 Invasion gene expression up-regulator - - - 0.000000000000000000000000000000000000000007688 156.0
CMS1_k127_23767_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000002635 55.0
CMS1_k127_2383910_0 divalent heavy-metal cations transporter K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 357.0
CMS1_k127_2383910_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 321.0
CMS1_k127_2383910_2 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000003736 224.0
CMS1_k127_2402675_0 branched-chain amino acid K11959 - - 2.098e-269 831.0
CMS1_k127_2402675_1 Belongs to the binding-protein-dependent transport system permease family K11960 - - 3.496e-223 699.0
CMS1_k127_2402675_2 Diguanylate cyclase - - - 0.00003428 49.0
CMS1_k127_2405022_0 TrkA-N domain - - - 2.081e-319 982.0
CMS1_k127_2405022_1 Belongs to the peptidase M16 family - - - 2.906e-274 850.0
CMS1_k127_2405022_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001773 240.0
CMS1_k127_2405022_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000386 223.0
CMS1_k127_2405022_13 - - - - 0.0000000000000000000000000000002382 123.0
CMS1_k127_2405022_14 Protein of unknown function (DUF2789) - - - 0.0000000000000000000000005058 106.0
CMS1_k127_2405022_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.343e-239 743.0
CMS1_k127_2405022_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 531.0
CMS1_k127_2405022_4 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 491.0
CMS1_k127_2405022_5 Peroxidase K07223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 480.0
CMS1_k127_2405022_6 Belongs to the UPF0246 family K09861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 452.0
CMS1_k127_2405022_7 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 442.0
CMS1_k127_2405022_8 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 386.0
CMS1_k127_2405022_9 Sel1-like repeats. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002214 252.0
CMS1_k127_242877_0 transcriptional regulator K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 559.0
CMS1_k127_242877_1 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 454.0
CMS1_k127_242877_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 426.0
CMS1_k127_242877_3 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 430.0
CMS1_k127_242877_4 Protein of unknown function (DUF3530) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 341.0
CMS1_k127_242877_5 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 317.0
CMS1_k127_242877_6 Nucleotidyl transferase K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000375 270.0
CMS1_k127_242877_7 phosphotransferase related to Ser Thr protein K07102 - 2.7.1.221 0.0000000000000000000000000002379 114.0
CMS1_k127_2439227_0 Belongs to the GcvT family K00302 - 1.5.3.1 4.153e-312 960.0
CMS1_k127_2439227_1 Sarcosine oxidase, subunit beta K00303 - 1.5.3.1 2.13e-272 839.0
CMS1_k127_2439227_2 Sarcosine oxidase, delta subunit K00304 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000004147 210.0
CMS1_k127_2439227_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000004788 193.0
CMS1_k127_2443762_0 C4-dicarboxylate transport system - - - 1.065e-250 778.0
CMS1_k127_2443762_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 404.0
CMS1_k127_2443762_2 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009069 274.0
CMS1_k127_2443762_3 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000000000000000000000003727 162.0
CMS1_k127_2454763_0 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 426.0
CMS1_k127_2454763_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 376.0
CMS1_k127_2454763_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 317.0
CMS1_k127_2457179_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 391.0
CMS1_k127_2457179_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 336.0
CMS1_k127_2457179_2 Dihaem cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 281.0
CMS1_k127_2457179_3 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000000000000001478 171.0
CMS1_k127_2457179_4 PFAM Propeptide, PepSY amd peptidase M4 - - - 0.0000000000003313 75.0
CMS1_k127_2464040_0 Tfp pilus assembly protein K08086 - - 1.272e-221 697.0
CMS1_k127_2464040_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.485e-197 616.0
CMS1_k127_246677_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.763e-207 645.0
CMS1_k127_246677_1 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 410.0
CMS1_k127_246677_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 357.0
CMS1_k127_246677_3 TonB C terminal K03646 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 316.0
CMS1_k127_246677_4 Biopolymer transport protein K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001233 240.0
CMS1_k127_246677_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000208 236.0
CMS1_k127_246677_6 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000007254 217.0
CMS1_k127_246677_7 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000000001014 162.0
CMS1_k127_2483730_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1592.0
CMS1_k127_2483730_1 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.0 1411.0
CMS1_k127_2483730_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 565.0
CMS1_k127_2483730_3 membrane protein, required for spore maturation in B.subtilis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 399.0
CMS1_k127_2483730_4 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 370.0
CMS1_k127_2483730_5 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 343.0
CMS1_k127_2483730_6 Protein of unknown function (DUF2782) - - - 0.000000000000000000000000000000000000000003076 159.0
CMS1_k127_2484143_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.265e-281 872.0
CMS1_k127_2484143_1 COG0583 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 444.0
CMS1_k127_2484143_2 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 337.0
CMS1_k127_2484143_3 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 281.0
CMS1_k127_2484143_4 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000000000000000008674 222.0
CMS1_k127_2490341_0 With GlrK is part of a two-component signal transduction system regulating glmY K07715 - - 3.413e-276 852.0
CMS1_k127_2490341_1 His Kinase A (phosphoacceptor) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 406.0
CMS1_k127_2490341_2 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006803 250.0
CMS1_k127_2502778_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.914e-267 844.0
CMS1_k127_2502778_1 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 536.0
CMS1_k127_2502778_2 Branched-chain amino acid transport - - - 0.00000000000000000000000000000000000005706 143.0
CMS1_k127_2502778_3 HupF/HypC family K04653 - - 0.000000000000000000000000000007594 119.0
CMS1_k127_250982_0 LapD/MoxY periplasmic domain - - - 2.016e-197 620.0
CMS1_k127_250982_1 MATE efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 595.0
CMS1_k127_250982_2 Protein of unknown function (DUF3080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 457.0
CMS1_k127_250982_3 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 347.0
CMS1_k127_250982_4 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.000000000000000000000000000000000000000000000000000003859 190.0
CMS1_k127_252360_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 511.0
CMS1_k127_252360_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 436.0
CMS1_k127_252360_2 transcriptional regulator K19337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 424.0
CMS1_k127_2527215_0 UPF0210 protein K09157 - - 5.142e-201 632.0
CMS1_k127_2527215_1 COG0421 Spermidine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 411.0
CMS1_k127_2527215_2 Tautomerase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000006079 235.0
CMS1_k127_2527215_3 Protein of unknown function (DUF861) K06995 - - 0.00000000000000000000000000000000000000000000000000000000007866 203.0
CMS1_k127_2527215_4 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000001318 71.0
CMS1_k127_2529017_0 Paraquat-inducible protein B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 586.0
CMS1_k127_2529017_1 Protein of unknown function (DUF2959) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 348.0
CMS1_k127_2529017_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 322.0
CMS1_k127_2529017_3 COG4240 Predicted kinase K15918 - 2.7.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000002283 260.0
CMS1_k127_255572_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 2053.0
CMS1_k127_255572_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 3.568e-285 878.0
CMS1_k127_255572_2 peptidase K04774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 609.0
CMS1_k127_255572_3 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 593.0
CMS1_k127_255572_4 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 516.0
CMS1_k127_255572_5 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 336.0
CMS1_k127_255572_6 Peptidoglycan-binding protein, CsiV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 307.0
CMS1_k127_255572_7 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004677 269.0
CMS1_k127_255572_8 Protein of unknown function (DUF2750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003619 248.0
CMS1_k127_2561032_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1071.0
CMS1_k127_2561032_1 Protein of unknown function (DUF2797) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 486.0
CMS1_k127_2561032_2 membrane protein (homolog of Drosophila rhomboid) K02441 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 338.0
CMS1_k127_2561032_3 protein conserved in bacteria K09916 - - 0.0000000000000000000000000000000000000000004465 158.0
CMS1_k127_2578971_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.184e-288 887.0
CMS1_k127_2578971_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.863e-213 662.0
CMS1_k127_2578971_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 548.0
CMS1_k127_2578971_3 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 320.0
CMS1_k127_2578971_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005167 265.0
CMS1_k127_2583493_0 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 1.674e-216 678.0
CMS1_k127_2583493_1 COG2199 FOG GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 460.0
CMS1_k127_2583493_2 Putative exonuclease SbcCD, C subunit K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 316.0
CMS1_k127_2583493_3 membrane - - - 0.00000000000000000000000002725 108.0
CMS1_k127_2606701_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1483.0
CMS1_k127_2606701_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 511.0
CMS1_k127_2606701_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 319.0
CMS1_k127_2606701_3 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000001224 216.0
CMS1_k127_2606701_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000006164 95.0
CMS1_k127_2611349_0 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 344.0
CMS1_k127_2611349_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000005947 237.0
CMS1_k127_2615824_0 COG3385 FOG Transposase and inactivated derivatives - - - 2.838e-210 658.0
CMS1_k127_2615824_1 small GTP-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 449.0
CMS1_k127_2615824_2 Putative 2OG-Fe(II) oxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009913 434.0
CMS1_k127_2615824_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 348.0
CMS1_k127_2615824_4 Disulfide bond formation protein DsbB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009813 240.0
CMS1_k127_2615824_5 Pfam:Pyridox_oxidase K07226 - - 0.0000000000000000000000000000000000000000000000000000000003849 207.0
CMS1_k127_2615824_6 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000009283 142.0
CMS1_k127_2615824_7 Protein of unknown function (DUF2788) - - - 0.0000000000000000000000000009203 113.0
CMS1_k127_2638530_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1773.0
CMS1_k127_2638530_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 3.161e-278 862.0
CMS1_k127_2638530_10 COG4966 Tfp pilus assembly protein PilW K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000174 266.0
CMS1_k127_2638530_11 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001403 255.0
CMS1_k127_2638530_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000000000000000000000000000000005365 235.0
CMS1_k127_2638530_13 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 GO:0003674,GO:0003824,GO:0008119,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008757,GO:0010035,GO:0010038,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0046690,GO:0050896 2.1.1.67 0.000000000000000000000000000000000000000000000000000002236 198.0
CMS1_k127_2638530_14 Pilus assembly protein PilX K02673 - - 0.000000000000000000000000000000000000000000002421 171.0
CMS1_k127_2638530_15 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000002346 161.0
CMS1_k127_2638530_16 COG4967 Tfp pilus assembly protein PilV - - - 0.000000000000000000000000000000000000000004182 160.0
CMS1_k127_2638530_17 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000000000481 143.0
CMS1_k127_2638530_18 COG3385 FOG Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000002862 139.0
CMS1_k127_2638530_2 catalyzes a condensation reaction in fatty acid biosynthesis addition of an acyl acceptor of two carbons from malonyl-ACP K00647 - 2.3.1.41 9.716e-251 775.0
CMS1_k127_2638530_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 7.623e-231 718.0
CMS1_k127_2638530_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 2.097e-212 664.0
CMS1_k127_2638530_5 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 589.0
CMS1_k127_2638530_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 570.0
CMS1_k127_2638530_7 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 382.0
CMS1_k127_2638530_8 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 356.0
CMS1_k127_2638530_9 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 294.0
CMS1_k127_2643010_0 Zinc transport protein zntB K16074 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015562,GO:0016020,GO:0016021,GO:0022857,GO:0022883,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046583,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 359.0
CMS1_k127_2643010_1 COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D K01424 GO:0003674,GO:0003824,GO:0004067,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006530,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032787,GO:0033345,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:0072329,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 303.0
CMS1_k127_2643010_2 cheY-homologous receiver domain - - - 0.0000000000000006751 89.0
CMS1_k127_2643010_3 Protein of unknown function (DUF3135) - - - 0.0000000000002715 74.0
CMS1_k127_2643010_4 Protein of unknown function (DUF3095) - - - 0.000000000001133 69.0
CMS1_k127_2643549_0 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0 1260.0
CMS1_k127_26572_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 8.872e-208 649.0
CMS1_k127_26572_1 diguanylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 491.0
CMS1_k127_2681824_0 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 6.535e-237 740.0
CMS1_k127_2681824_1 Diaminopimelate epimerase K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 604.0
CMS1_k127_2681824_2 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 479.0
CMS1_k127_2681824_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 323.0
CMS1_k127_2681824_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 307.0
CMS1_k127_2681824_5 SMART AAA ATPase K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000001822 184.0
CMS1_k127_2698364_0 AMP-binding enzyme C-terminal domain K00666 - - 9.227e-262 809.0
CMS1_k127_2698364_1 Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 555.0
CMS1_k127_2698364_2 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 343.0
CMS1_k127_2723789_0 Oxidoreductase K09471 - - 7.143e-263 812.0
CMS1_k127_2723789_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.512e-227 707.0
CMS1_k127_2723789_2 Bacterial extracellular solute-binding protein, family 7 - - - 3.034e-202 631.0
CMS1_k127_2723789_3 transcriptional regulator K21699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 505.0
CMS1_k127_2723789_4 sodium proton antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 411.0
CMS1_k127_2723789_5 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 284.0
CMS1_k127_2724723_0 AAA domain K07028 - - 3.225e-238 743.0
CMS1_k127_2724723_1 Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 337.0
CMS1_k127_2724723_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000002265 64.0
CMS1_k127_2729579_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 547.0
CMS1_k127_2729579_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 405.0
CMS1_k127_2729579_2 NAD synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000481 228.0
CMS1_k127_2737121_0 GTP-binding protein TypA K06207 - - 0.0 1099.0
CMS1_k127_2737121_1 Ribosomal protein S1-like RNA-binding domain - - - 1.861e-307 947.0
CMS1_k127_2737121_10 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000000000000000000000000000000000000000003411 159.0
CMS1_k127_2737121_11 Competence protein ComEA K02237 - - 0.0000000000000000000000001097 109.0
CMS1_k127_2737121_12 Histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000001856 106.0
CMS1_k127_2737121_2 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 4.053e-302 927.0
CMS1_k127_2737121_3 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 9.296e-202 633.0
CMS1_k127_2737121_4 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 570.0
CMS1_k127_2737121_5 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 522.0
CMS1_k127_2737121_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 411.0
CMS1_k127_2737121_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 389.0
CMS1_k127_2737121_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006112 250.0
CMS1_k127_2737121_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000000000000002846 195.0
CMS1_k127_2748951_0 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 357.0
CMS1_k127_2748951_1 Diguanylate cyclase K21021 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000005532 225.0
CMS1_k127_2748951_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000007507 72.0
CMS1_k127_2771851_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 2.8e-209 652.0
CMS1_k127_2771851_1 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 529.0
CMS1_k127_2771851_2 PFAM Asparaginase glutaminase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 517.0
CMS1_k127_2771851_3 Hsp20/alpha crystallin family - - - 0.00000000000000000000000000000000000000000000000000000468 197.0
CMS1_k127_2771851_4 Alpha beta hydrolase K01055 - 3.1.1.24 0.000000000000000000000000000386 115.0
CMS1_k127_2771851_5 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000004866 115.0
CMS1_k127_2774525_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0 1249.0
CMS1_k127_2774525_1 Amino Acid K16263 - - 4.081e-215 674.0
CMS1_k127_2774525_2 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 545.0
CMS1_k127_2774525_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 328.0
CMS1_k127_2774525_4 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009427 241.0
CMS1_k127_2774525_5 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000004432 221.0
CMS1_k127_2774525_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001398 212.0
CMS1_k127_2774525_7 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000001451 153.0
CMS1_k127_2774525_8 MAPEG family - - - 0.00000000000000000000000000000000002056 138.0
CMS1_k127_2774525_9 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000000000000000004687 138.0
CMS1_k127_2777801_0 FOG PAS PAC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 544.0
CMS1_k127_2777801_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001246 265.0
CMS1_k127_2783783_0 Nickel-dependent hydrogenase K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 2.009e-274 848.0
CMS1_k127_2783783_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 339.0
CMS1_k127_2783783_2 Protein of unknown function (DUF3833) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 314.0
CMS1_k127_2783783_3 Protein of unknown function (DUF2878) - - - 0.00000000000000000000000000000000000000000000000000000000002464 211.0
CMS1_k127_2783783_4 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.0000000000000000000000000000000000000000000000000000000003409 207.0
CMS1_k127_2783783_5 Chalcone isomerase-like - - - 0.00000000000000000000000000000000000000000000000000003783 192.0
CMS1_k127_2783783_6 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000005337 96.0
CMS1_k127_2785281_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 8.076e-232 721.0
CMS1_k127_2785281_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007505 273.0
CMS1_k127_2785281_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000001014 172.0
CMS1_k127_2785281_3 - - - - 0.00000000001938 64.0
CMS1_k127_2800762_0 Putative diguanylate phosphodiesterase - - - 3.482e-308 954.0
CMS1_k127_2800762_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 5.452e-260 807.0
CMS1_k127_2800762_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 2.427e-215 671.0
CMS1_k127_2800762_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 3.715e-206 642.0
CMS1_k127_2800762_4 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 362.0
CMS1_k127_2800762_5 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 335.0
CMS1_k127_2800762_6 ATPase or kinase K06925 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003 275.0
CMS1_k127_2800762_7 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000953 256.0
CMS1_k127_2812906_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.535e-295 910.0
CMS1_k127_2812906_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.631e-221 692.0
CMS1_k127_2812906_10 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000005077 123.0
CMS1_k127_2812906_2 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 539.0
CMS1_k127_2812906_3 Response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 477.0
CMS1_k127_2812906_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 431.0
CMS1_k127_2812906_5 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 410.0
CMS1_k127_2812906_6 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 282.0
CMS1_k127_2812906_7 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001559 279.0
CMS1_k127_2812906_8 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006981 261.0
CMS1_k127_2812906_9 Sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000659 233.0
CMS1_k127_2815274_0 Methane/Phenol/Toluene Hydroxylase - - - 0.0 1046.0
CMS1_k127_2815274_1 iron ABC transporter permease K02011 - - 3.732e-318 980.0
CMS1_k127_2815274_10 Negative regulator of beta-lactamase expression K03806 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000002306 246.0
CMS1_k127_2815274_11 Phenol hydroxylase conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000001535 222.0
CMS1_k127_2815274_12 Phenol hydroxylase subunit - - - 0.000000000000000000000000000000000000000002888 156.0
CMS1_k127_2815274_13 MmoB/DmpM family K16244 - - 0.0000000000000000001766 91.0
CMS1_k127_2815274_2 Activator of aromatic catabolism - - - 5.507e-298 921.0
CMS1_k127_2815274_3 Oxidoreductase FAD-binding domain - - - 4.719e-218 677.0
CMS1_k127_2815274_4 Methane/Phenol/Toluene Hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 614.0
CMS1_k127_2815274_5 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 599.0
CMS1_k127_2815274_6 Iron deficiency-induced protein A K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 584.0
CMS1_k127_2815274_7 - K02227,K03807 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 394.0
CMS1_k127_2815274_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 385.0
CMS1_k127_2815274_9 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001837 246.0
CMS1_k127_2815567_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 1.509e-239 754.0
CMS1_k127_2815567_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 546.0
CMS1_k127_2819101_0 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.228e-230 714.0
CMS1_k127_2819101_1 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 1.177e-212 662.0
CMS1_k127_2820780_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 3.801e-288 890.0
CMS1_k127_2820780_1 protein conserved in bacteria K09788 - - 3.53e-236 733.0
CMS1_k127_2820780_2 glyoxalase K06996 - - 0.0000000000000000000000000000000000000000000000000002021 187.0
CMS1_k127_2820780_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000007855 97.0
CMS1_k127_2823131_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 4.583e-247 767.0
CMS1_k127_2823131_1 His Kinase A (phosphoacceptor) domain K07637 - 2.7.13.3 1.473e-241 751.0
CMS1_k127_2823131_2 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 461.0
CMS1_k127_2823131_3 transcriptional regulator K02483,K07660,K07666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 450.0
CMS1_k127_2823131_4 Peptidase propeptide and YPEB domain - - - 0.000000000000000000009119 92.0
CMS1_k127_2840302_0 Oligopeptidase K01414 - 3.4.24.70 0.0 1202.0
CMS1_k127_2840302_1 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 355.0
CMS1_k127_2840302_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 345.0
CMS1_k127_2840302_3 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005132 232.0
CMS1_k127_2840302_4 nucleic-acid-binding protein containing a Zn-ribbon domain K07070 - - 0.000000000000000000000000000000000000000000001866 164.0
CMS1_k127_2846400_0 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 558.0
CMS1_k127_2846400_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 415.0
CMS1_k127_2846400_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 329.0
CMS1_k127_2846400_3 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073,K18366 - 1.2.1.10,1.2.1.87 0.000000000001275 67.0
CMS1_k127_2858087_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 4.388e-269 831.0
CMS1_k127_2858087_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 3.475e-196 612.0
CMS1_k127_2858087_10 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000002112 150.0
CMS1_k127_2858087_11 - K01179 - 3.2.1.4 0.00000000000000002034 85.0
CMS1_k127_2858087_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 560.0
CMS1_k127_2858087_3 Voltage-dependent anion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 509.0
CMS1_k127_2858087_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 474.0
CMS1_k127_2858087_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 406.0
CMS1_k127_2858087_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 386.0
CMS1_k127_2858087_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000001029 239.0
CMS1_k127_2858087_8 Domain of unknown function (DUF4845) - - - 0.000000000000000000000000000000000000000000000000003127 183.0
CMS1_k127_2858087_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000001163 166.0
CMS1_k127_2862180_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 441.0
CMS1_k127_2862180_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 377.0
CMS1_k127_2862180_2 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002057 251.0
CMS1_k127_2862180_3 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001203 230.0
CMS1_k127_2865799_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 540.0
CMS1_k127_2865799_1 transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 515.0
CMS1_k127_2865799_2 Ribonucleotide reductase subunit alpha - - - 0.000000000000000000000000000000000000000000000000000000000000001426 219.0
CMS1_k127_2865799_3 protein conserved in bacteria K09947 - - 0.000000000000000000000000000002083 121.0
CMS1_k127_2865799_5 Protein of unknown function (DUF3179) - - - 0.000000003542 58.0
CMS1_k127_2868152_0 Major facilitator superfamily - - - 1.382e-225 703.0
CMS1_k127_2868152_1 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009439,GO:0009440,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901565,GO:1901575 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 401.0
CMS1_k127_2868152_2 Oxaloacetate K01960 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000005708 206.0
CMS1_k127_2871526_0 COG1994 Zn-dependent proteases - - - 3.253e-218 679.0
CMS1_k127_2871526_1 Fumarylacetoacetase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 363.0
CMS1_k127_2871526_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07772 GO:0000156,GO:0000160,GO:0003674,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000101 278.0
CMS1_k127_2871526_3 Histidine kinase - - - 0.000000000000000000000116 100.0
CMS1_k127_2871526_4 - - - - 0.00000000000000000008993 90.0
CMS1_k127_2885531_0 COG0591 Na proline symporter - - - 0.0 2322.0
CMS1_k127_2885531_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1104.0
CMS1_k127_2885531_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0 1068.0
CMS1_k127_2885531_3 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 391.0
CMS1_k127_2885531_4 membrane - - - 0.0000000000000000000000000000000000000000698 153.0
CMS1_k127_2885531_5 Belongs to the peptidase S1B family K04775 - - 0.0000000000001022 73.0
CMS1_k127_2904185_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.196e-308 946.0
CMS1_k127_2904185_1 Tripartite tricarboxylate transporter TctA K07793 - - 1.873e-285 882.0
CMS1_k127_2904185_2 ATPases associated with a variety of cellular activities K05776 - - 2.127e-282 871.0
CMS1_k127_2904185_3 Histidine kinase K02476 - 2.7.13.3 1.276e-256 800.0
CMS1_k127_2904185_4 C4-dicarboxylate ABC transporter substrate-binding protein K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 568.0
CMS1_k127_2904185_5 Transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 314.0
CMS1_k127_2904185_6 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 317.0
CMS1_k127_2904185_7 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000000000000000000000000000000000000002967 227.0
CMS1_k127_2904185_8 Protein of unknown function (DUF2937) - - - 0.000000000000000000000000000000000000000000000000000005965 194.0
CMS1_k127_2904185_9 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000004721 101.0
CMS1_k127_2915686_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 496.0
CMS1_k127_2915686_1 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 391.0
CMS1_k127_2922043_0 Flagellar hook-length control protein FliK - - - 3.458e-217 685.0
CMS1_k127_2922043_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 413.0
CMS1_k127_2922043_2 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 397.0
CMS1_k127_2922043_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001805 274.0
CMS1_k127_2922043_4 Protein of unknown function (DUF2802) - - - 0.000000000000000000000000000000000000000000000000000000000000000003703 227.0
CMS1_k127_2922043_5 CheW-like domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000003073 221.0
CMS1_k127_2922043_6 the cytoplasmic domain of flagellar protein K04061 - - 0.00000000000000000000000000000000000000000004116 161.0
CMS1_k127_2934551_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0 1082.0
CMS1_k127_2934551_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0 1065.0
CMS1_k127_2934551_2 acyl-CoA dehydrogenase K20035 - - 0.0 1064.0
CMS1_k127_2934551_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 6.767e-195 610.0
CMS1_k127_2934551_4 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 558.0
CMS1_k127_2934551_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 455.0
CMS1_k127_2934551_6 Cache_2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 333.0
CMS1_k127_2934551_7 electron transfer activity K03521 - - 0.000000000000000000000000000000000003044 144.0
CMS1_k127_2947131_0 membrane - - - 0.0 1718.0
CMS1_k127_2947131_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 8.119e-264 819.0
CMS1_k127_2947131_10 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 306.0
CMS1_k127_2947131_11 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 304.0
CMS1_k127_2947131_12 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001471 263.0
CMS1_k127_2947131_13 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002001 262.0
CMS1_k127_2947131_14 PTS fructose transporter subunit IIA K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000004904 237.0
CMS1_k127_2947131_15 Organic solvent ABC transporter substrate-binding protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000003382 234.0
CMS1_k127_2947131_16 seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing K05808 - - 0.0000000000000000000000000000000000000000000000000003488 184.0
CMS1_k127_2947131_17 Phosphocarrier protein HPr K08485,K11189 - - 0.000000000000000000000000000000000000000001746 156.0
CMS1_k127_2947131_18 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000000006344 156.0
CMS1_k127_2947131_19 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.0000000000000000000000000000002227 123.0
CMS1_k127_2947131_2 Acts as a magnesium transporter K06213 - - 4.515e-255 791.0
CMS1_k127_2947131_20 STAS domain - - - 0.00000000000000000005475 92.0
CMS1_k127_2947131_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.61e-251 779.0
CMS1_k127_2947131_4 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 568.0
CMS1_k127_2947131_5 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391 515.0
CMS1_k127_2947131_6 antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 503.0
CMS1_k127_2947131_7 ABC transporter maintaining outer membrane lipid asymmetry K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 480.0
CMS1_k127_2947131_8 ABC transporter ATP-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 449.0
CMS1_k127_2947131_9 (ABC) transporter, permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 446.0
CMS1_k127_2948683_0 FAD binding domain - - - 1.842e-238 740.0
CMS1_k127_2948683_1 transcriptional regulator K02521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 533.0
CMS1_k127_2948683_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 466.0
CMS1_k127_2948683_3 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 426.0
CMS1_k127_2948683_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 396.0
CMS1_k127_2948683_5 Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) K05774 - 2.7.4.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 353.0
CMS1_k127_2948683_6 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001311 241.0
CMS1_k127_2967824_0 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 288.0
CMS1_k127_2967824_1 FlgN protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006488 238.0
CMS1_k127_2967824_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000003584 145.0
CMS1_k127_2967824_4 Diguanylate cyclase K21085 - 2.7.7.65 0.00000000000000000000001433 102.0
CMS1_k127_2967824_5 diguanylate cyclase - - - 0.00000000000000002917 83.0
CMS1_k127_2967824_6 Pfam:AmoA K07120 - - 0.000000002674 60.0
CMS1_k127_2967824_7 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.000000007412 60.0
CMS1_k127_2971738_0 transcriptional regulator K07506,K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 407.0
CMS1_k127_2971738_1 Integrase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003713 277.0
CMS1_k127_2971738_2 COG0517 FOG CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000149 209.0
CMS1_k127_2971738_3 Phospholipase Carboxylesterase K06999 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.00000000000000000000000000000000002387 142.0
CMS1_k127_2971738_4 Protein of unknown function (DUF1097) - - - 0.000000000001429 68.0
CMS1_k127_2974356_0 Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3- hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI) K05712 - 1.14.13.127 8.733e-238 745.0
CMS1_k127_2974356_1 Catalyzes the formation of succinate from succinate semialdehyde K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 603.0
CMS1_k127_2974356_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003985 216.0
CMS1_k127_2974356_11 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000003464 186.0
CMS1_k127_2974356_12 hydratase K02554 - 4.2.1.80 0.000000000000000000000000000000000000000001819 165.0
CMS1_k127_2974356_13 universal stress protein - - - 0.0000000000000000000000000000000000000000378 156.0
CMS1_k127_2974356_14 - - - - 0.000000000000000000000000000000000732 138.0
CMS1_k127_2974356_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 565.0
CMS1_k127_2974356_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 452.0
CMS1_k127_2974356_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 437.0
CMS1_k127_2974356_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 413.0
CMS1_k127_2974356_6 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 356.0
CMS1_k127_2974356_7 Amino acid synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 332.0
CMS1_k127_2974356_8 Sodium Bile acid symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 293.0
CMS1_k127_2974356_9 Belongs to the aldehyde dehydrogenase family K00146 - 1.2.1.39 0.00000000000000000000000000000000000000000000000000000000000001805 215.0
CMS1_k127_2977520_0 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 327.0
CMS1_k127_2977520_1 Hemerythrin K07216 - - 0.000000000000000000000000002816 111.0
CMS1_k127_2978892_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 1.166e-291 902.0
CMS1_k127_2978892_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484 - 2.7.13.3 2.061e-196 620.0
CMS1_k127_2978892_2 transcriptional regulator K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 384.0
CMS1_k127_2978892_3 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 374.0
CMS1_k127_2978892_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001659 260.0
CMS1_k127_2978892_5 Protein of unknown function (DUF2799) - - - 0.00000000000000000000000000000000000000000000000000000000000000008126 227.0
CMS1_k127_2978892_6 LTXXQ motif family protein - - - 0.000000000000000000000000000000000000000000000000000002033 196.0
CMS1_k127_2978892_7 electron transfer activity K15536 - - 0.000000000000000000000000000000000000000000000002764 177.0
CMS1_k127_2978892_8 - - - - 0.000000000000000000000000000000000000000000001094 165.0
CMS1_k127_2978892_9 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000002166 149.0
CMS1_k127_297973_0 Virulence factor membrane-bound polymerase, C-terminal K13009 - - 9.475e-255 799.0
CMS1_k127_297973_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 1.304e-242 755.0
CMS1_k127_297973_2 Belongs to the UPF0061 (SELO) family - - - 1.695e-232 726.0
CMS1_k127_297973_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 589.0
CMS1_k127_297973_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 417.0
CMS1_k127_297973_5 Domain of unknown function (DUF4892) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 397.0
CMS1_k127_297973_6 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000000000000000000000005623 204.0
CMS1_k127_297973_7 - - - - 0.000000000000000000000000004166 112.0
CMS1_k127_2985126_0 transporter antisigma-factor antagonist STAS K03321 - - 1.591e-286 887.0
CMS1_k127_2985126_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.992e-280 865.0
CMS1_k127_2985126_10 Diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000002119 216.0
CMS1_k127_2985126_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 1.446e-195 615.0
CMS1_k127_2985126_3 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 553.0
CMS1_k127_2985126_4 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 430.0
CMS1_k127_2985126_5 Na -dependent transporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 386.0
CMS1_k127_2985126_6 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 360.0
CMS1_k127_2985126_7 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 320.0
CMS1_k127_2985126_8 Uncharacterized protein family UPF0029 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 289.0
CMS1_k127_2985126_9 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000009469 235.0
CMS1_k127_2987305_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.424e-281 868.0
CMS1_k127_2987305_1 Transcription factor K18850 - 1.14.11.47 3.496e-245 758.0
CMS1_k127_2987305_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 4.86e-226 704.0
CMS1_k127_2987305_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 455.0
CMS1_k127_2987305_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 446.0
CMS1_k127_2987305_5 High frequency lysogenization protein HflD homolog K07153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 379.0
CMS1_k127_2987305_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 293.0
CMS1_k127_2987305_7 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000001721 204.0
CMS1_k127_2987305_8 Isocitrate lyase K01637 - 4.1.3.1 0.000000000000000000000000000000001363 130.0
CMS1_k127_300036_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 1.804e-229 715.0
CMS1_k127_300036_1 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 3.002e-194 606.0
CMS1_k127_300036_2 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 600.0
CMS1_k127_300036_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 533.0
CMS1_k127_300036_4 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 531.0
CMS1_k127_300036_5 found to be peripherally associated with the inner membrane in Escherichia coli K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 382.0
CMS1_k127_300036_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 341.0
CMS1_k127_300036_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 307.0
CMS1_k127_300036_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 304.0
CMS1_k127_300036_9 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000672 268.0
CMS1_k127_3016084_0 Oxidoreductase - - - 0.0 1016.0
CMS1_k127_3016084_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000002599 262.0
CMS1_k127_3016084_2 Lipoate-protein ligase - - - 0.0000000000000000000000000000000000000000000000000000000000001542 220.0
CMS1_k127_3016084_3 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000002353 196.0
CMS1_k127_3016084_4 Biotin-requiring enzyme - - - 0.00000000000000000000000000003981 117.0
CMS1_k127_3016084_5 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.000000000004609 66.0
CMS1_k127_3039486_0 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000001326 109.0
CMS1_k127_3039486_1 - - - - 0.00000000001485 65.0
CMS1_k127_3043094_0 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 4.852e-195 610.0
CMS1_k127_3043094_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 615.0
CMS1_k127_3043094_2 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000138 227.0
CMS1_k127_3043094_3 chain release factor K15034 - - 0.000000000000000000000000000000000000000000000000000000000000002597 219.0
CMS1_k127_3043094_4 Protein of unknown function (DUF3012) - - - 0.00000000000000000000001679 100.0
CMS1_k127_3051144_0 COG0471 Di- and tricarboxylate transporters - - - 4.145e-275 850.0
CMS1_k127_3051144_1 nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 472.0
CMS1_k127_3051144_2 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 382.0
CMS1_k127_3061865_0 M18 family aminopeptidase K01267 - 3.4.11.21 2.327e-238 741.0
CMS1_k127_3061865_1 COG0840 Methyl-accepting chemotaxis protein K02660 - - 4.996e-201 638.0
CMS1_k127_3061865_10 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000001728 231.0
CMS1_k127_3061865_11 cytidylyltransferase K00980 - 2.7.7.39 0.000000000000000000000000000000000000000000000000000000000000000257 223.0
CMS1_k127_3061865_12 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000001157 227.0
CMS1_k127_3061865_13 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000000004243 203.0
CMS1_k127_3061865_14 Dodecin K09165 - - 0.0000000000000000000000000000000004994 131.0
CMS1_k127_3061865_15 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000003459 121.0
CMS1_k127_3061865_16 - - - - 0.0000000000000000000009342 97.0
CMS1_k127_3061865_17 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000005306 96.0
CMS1_k127_3061865_18 - - - - 0.000000000000000144 81.0
CMS1_k127_3061865_2 protein involved in benzoate metabolism K05782 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 548.0
CMS1_k127_3061865_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 482.0
CMS1_k127_3061865_4 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 480.0
CMS1_k127_3061865_5 Putative amidoligase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 449.0
CMS1_k127_3061865_6 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 378.0
CMS1_k127_3061865_7 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 327.0
CMS1_k127_3061865_8 glutamine amidotransferases K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000914 280.0
CMS1_k127_3061865_9 Helix-turn-helix XRE-family like proteins - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003377 251.0
CMS1_k127_308462_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0 1015.0
CMS1_k127_308462_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.343e-292 900.0
CMS1_k127_308462_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 2.278e-219 690.0
CMS1_k127_308462_3 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002428 265.0
CMS1_k127_3089341_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1379.0
CMS1_k127_3089341_1 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.729e-258 798.0
CMS1_k127_3089341_2 L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 2.322e-228 711.0
CMS1_k127_3089341_3 membrane K09790 - - 0.00000000000000000000000000000000000000000000000002775 181.0
CMS1_k127_3089341_4 Domain of unknown function (DUF4336) - - - 0.0000000000000000000000000000000000000000004445 160.0
CMS1_k127_3103634_0 protein conserved in bacteria K16514 - 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 593.0
CMS1_k127_3103634_1 Amidohydrolase K10221 - 3.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 554.0
CMS1_k127_3103634_10 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000002531 157.0
CMS1_k127_3103634_11 Protocatechuate 4,5-dioxygenase K04100 - 1.13.11.8 0.0000000000000000000000000000000002932 135.0
CMS1_k127_3103634_12 Polysaccharide biosynthesis protein - - - 0.00000000000000000008286 94.0
CMS1_k127_3103634_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 454.0
CMS1_k127_3103634_3 PFAM Succinylglutamate desuccinylase Aspartoacylase K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 403.0
CMS1_k127_3103634_4 helix_turn_helix, arabinose operon control protein K18954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 396.0
CMS1_k127_3103634_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 378.0
CMS1_k127_3103634_6 Belongs to the RimK family K05844 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 322.0
CMS1_k127_3103634_7 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000001682 226.0
CMS1_k127_3103634_8 Dopa 45-dioxygenase K10253 - - 0.00000000000000000000000000000000000000000000000000000000002043 207.0
CMS1_k127_3103634_9 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000006627 206.0
CMS1_k127_3107318_0 C4-dicarboxylate ABC transporter permease - - - 4.038e-229 714.0
CMS1_k127_3107318_1 PFAM Amidohydrolase 2 K10220 - 4.2.1.83 3.679e-221 689.0
CMS1_k127_3107318_2 transcriptional regulator - - - 4.699e-206 646.0
CMS1_k127_3107318_3 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 603.0
CMS1_k127_3107318_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 581.0
CMS1_k127_3107318_5 Aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 509.0
CMS1_k127_3107318_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005802 252.0
CMS1_k127_3107318_7 Hemerythrin K07216 - - 0.0000000000000000000000000000000000000000000000000000000000000145 217.0
CMS1_k127_3107318_8 Aldolase/RraA K10218 - 4.1.3.17 0.00000000000000000000000000000000000003635 145.0
CMS1_k127_3110768_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 544.0
CMS1_k127_3110768_1 Phosphate transport system permease protein K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 529.0
CMS1_k127_3110768_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 446.0
CMS1_k127_3110768_3 protein conserved in bacteria K09941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 335.0
CMS1_k127_3110768_4 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000181 282.0
CMS1_k127_3113724_0 Heat shock 70 kDa protein K04043 - - 0.0 1152.0
CMS1_k127_3113724_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008308 555.0
CMS1_k127_3113724_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 451.0
CMS1_k127_3113724_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009898 280.0
CMS1_k127_3113724_4 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000002431 258.0
CMS1_k127_3131319_0 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 6.658e-195 612.0
CMS1_k127_3131319_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 408.0
CMS1_k127_3131319_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000549 89.0
CMS1_k127_3131319_3 - - - - 0.00000221 49.0
CMS1_k127_3132147_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1627.0
CMS1_k127_3132147_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00210,K00800 - 1.3.1.12,2.5.1.19 0.0 1286.0
CMS1_k127_3132147_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 4.964e-214 668.0
CMS1_k127_3132147_3 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 2.187e-196 617.0
CMS1_k127_3132147_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 576.0
CMS1_k127_3132147_5 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 455.0
CMS1_k127_3132147_6 haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.0000000000000008113 77.0
CMS1_k127_3139380_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K20455 - 4.2.1.117 0.0 1668.0
CMS1_k127_3139380_1 Belongs to the citrate synthase family K01659 - 2.3.3.5 5.383e-240 743.0
CMS1_k127_3148741_0 Aldehyde dehydrogenase family K22187 - - 4.193e-298 916.0
CMS1_k127_3148741_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 574.0
CMS1_k127_3148741_2 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 550.0
CMS1_k127_3148741_3 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 503.0
CMS1_k127_317765_0 xylanase chitin deacetylase K01452,K16842,K22278 - 3.5.1.104,3.5.1.41,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 586.0
CMS1_k127_317765_1 OHCU decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003948 264.0
CMS1_k127_317765_2 HIUase/Transthyretin family K07127 - 3.5.2.17 0.00000000000000000000000000000000000000000000000000000000000004438 214.0
CMS1_k127_317765_3 Allantoicase repeat K01477 GO:0003674,GO:0003824,GO:0004037,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.3.4 0.0000000000000000002572 87.0
CMS1_k127_3192331_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 476.0
CMS1_k127_3192331_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 377.0
CMS1_k127_3192331_2 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 289.0
CMS1_k127_3192331_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 284.0
CMS1_k127_3214115_0 belongs to the CobB CobQ family K13788 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006566,GO:0006567,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008959,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016053,GO:0016054,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017000,GO:0017001,GO:0017144,GO:0018130,GO:0019413,GO:0019427,GO:0019438,GO:0019541,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070689,GO:0071616,GO:0071704,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 2.3.1.8 3.565e-294 918.0
CMS1_k127_3214115_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 505.0
CMS1_k127_3214115_2 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 452.0
CMS1_k127_322247_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1053.0
CMS1_k127_322247_1 protein conserved in bacteria K09919 - - 1.697e-198 623.0
CMS1_k127_322247_10 - - - - 0.00000000000000000000000000000000000000003236 153.0
CMS1_k127_322247_11 FmdB family transcriptional regulator - - - 0.00000000000000000000000000000000002832 136.0
CMS1_k127_322247_2 Protein of unknown function, DUF484 - - - 2.415e-197 620.0
CMS1_k127_322247_3 aminopeptidase N K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 565.0
CMS1_k127_322247_4 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 445.0
CMS1_k127_322247_5 Pfam Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 308.0
CMS1_k127_322247_6 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 289.0
CMS1_k127_322247_7 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002586 274.0
CMS1_k127_322247_8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003879 266.0
CMS1_k127_322247_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000005289 218.0
CMS1_k127_3241120_0 Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 337.0
CMS1_k127_3241120_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 334.0
CMS1_k127_3241120_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 313.0
CMS1_k127_3241120_3 beta-lactamase activity K07126 - - 0.00000000000000000000000000000179 132.0
CMS1_k127_3241344_0 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 480.0
CMS1_k127_3241344_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 390.0
CMS1_k127_3241344_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000003777 216.0
CMS1_k127_3241344_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000007056 184.0
CMS1_k127_3241344_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0002031 44.0
CMS1_k127_3244027_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.509e-255 792.0
CMS1_k127_3244027_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 461.0
CMS1_k127_3244027_2 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 397.0
CMS1_k127_324660_0 Trk system potassium uptake protein K03498 - - 3.809e-286 882.0
CMS1_k127_324660_1 found to be peripherally associated with the inner membrane in Escherichia coli K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 470.0
CMS1_k127_324660_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000315 72.0
CMS1_k127_3267614_0 MATE efflux family protein - - - 3.319e-217 679.0
CMS1_k127_3267614_1 Domain of Unknown Function (DUF349) - - - 1.899e-212 672.0
CMS1_k127_3267614_2 reductase K00023 - 1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 481.0
CMS1_k127_3281536_0 PFAM transposase, IS4 family protein K07481 GO:0000271,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006351,GO:0006355,GO:0006629,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009279,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016051,GO:0016070,GO:0016740,GO:0016757,GO:0016758,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019867,GO:0030312,GO:0030313,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031975,GO:0032196,GO:0032774,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044424,GO:0044444,GO:0044462,GO:0044464,GO:0045226,GO:0045893,GO:0045935,GO:0046379,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1903509,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 570.0
CMS1_k127_3281536_1 COG0477 Permeases of the major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 559.0
CMS1_k127_3281536_2 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K21053 - 3.5.4.2,3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 466.0
CMS1_k127_3281536_3 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 433.0
CMS1_k127_3281536_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 436.0
CMS1_k127_3281536_5 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004113 274.0
CMS1_k127_3281536_6 Transposase - - - 0.00000000000785 66.0
CMS1_k127_3312323_0 PAS fold - - - 0.0 1458.0
CMS1_k127_3312323_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 1.475e-283 877.0
CMS1_k127_3312323_10 beta-lactamase activity K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 339.0
CMS1_k127_3312323_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002097 269.0
CMS1_k127_3312323_12 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000004661 240.0
CMS1_k127_3312323_13 Copper-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000236 207.0
CMS1_k127_3312323_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.301e-280 878.0
CMS1_k127_3312323_3 Periplasmic binding protein - - - 4.454e-216 674.0
CMS1_k127_3312323_4 Gram-negative porin - - - 1.058e-206 647.0
CMS1_k127_3312323_5 FIST N domain - - - 1.649e-205 644.0
CMS1_k127_3312323_6 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 567.0
CMS1_k127_3312323_7 Bacterial extracellular solute-binding proteins, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 515.0
CMS1_k127_3312323_8 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 409.0
CMS1_k127_3312323_9 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 390.0
CMS1_k127_3338770_0 DNA replication and repair protein RecF - - - 0.0 1927.0
CMS1_k127_3338770_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 397.0
CMS1_k127_3338770_2 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000001971 88.0
CMS1_k127_3372543_0 V4R - - - 1.103e-205 653.0
CMS1_k127_3372543_1 ABC transporter K16012 - - 0.000000000000000000000005787 106.0
CMS1_k127_338817_0 Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain K03578 - 3.6.4.13 0.0 1154.0
CMS1_k127_338817_1 Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain K03578 - 3.6.4.13 9.753e-271 837.0
CMS1_k127_338817_2 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 524.0
CMS1_k127_338817_3 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000000000000001106 220.0
CMS1_k127_3407286_0 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 8.638e-200 626.0
CMS1_k127_3407286_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 571.0
CMS1_k127_3407286_2 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 515.0
CMS1_k127_3407286_3 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 513.0
CMS1_k127_3407286_4 Diphthamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 337.0
CMS1_k127_3407286_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 311.0
CMS1_k127_3407286_6 rRNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001096 280.0
CMS1_k127_3407286_7 Involved in chromosome partitioning - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003921 274.0
CMS1_k127_3407286_8 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000002179 188.0
CMS1_k127_3407286_9 EamA-like transporter family - - - 0.000000000000000000001995 94.0
CMS1_k127_3435984_0 Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 465.0
CMS1_k127_3435984_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 384.0
CMS1_k127_3439000_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01782,K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 2.201e-291 910.0
CMS1_k127_3439000_1 DNA polymerase K03502 - - 6.123e-235 731.0
CMS1_k127_3439000_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.436e-209 657.0
CMS1_k127_3439000_3 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00626 - 2.3.1.9 1.297e-203 638.0
CMS1_k127_3439000_4 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 369.0
CMS1_k127_3439000_5 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 302.0
CMS1_k127_3439000_6 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000339 270.0
CMS1_k127_3439000_7 Belongs to the peptidase S24 family K03503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001972 243.0
CMS1_k127_3439000_8 Required for resistance to the phenazine antibiotic - - - 0.0000000000000000000000000000000000000007331 151.0
CMS1_k127_3439000_9 Belongs to the UPF0310 family - - - 0.000000000000000000000001816 104.0
CMS1_k127_3439812_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 2355.0
CMS1_k127_3439812_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 8.092e-259 804.0
CMS1_k127_3439812_10 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000009755 174.0
CMS1_k127_3439812_11 H-NS histone family - - - 0.0000000000000000000000000000000000001507 142.0
CMS1_k127_3439812_12 Domain of unknown function (DUF1840) - - - 0.0000000000000000000000000000001798 126.0
CMS1_k127_3439812_13 Belongs to the ompA family K03286 - - 0.0009726 42.0
CMS1_k127_3439812_2 metal-dependent phosphoesterases (PHP family) K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 474.0
CMS1_k127_3439812_3 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 393.0
CMS1_k127_3439812_4 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 363.0
CMS1_k127_3439812_5 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 340.0
CMS1_k127_3439812_6 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 332.0
CMS1_k127_3439812_7 TIGRFAM channel protein, hemolysin III family K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008064 279.0
CMS1_k127_3439812_8 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000001831 260.0
CMS1_k127_3439812_9 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.000000000000000000000000000000000000000000000000002548 183.0
CMS1_k127_3463742_0 Serine threonine protein - - - 4.185e-258 807.0
CMS1_k127_3463742_1 reductase K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 295.0
CMS1_k127_3463742_2 Nitrate nitrite transporter K02575 - - 0.0000000000000000000000000212 108.0
CMS1_k127_346843_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1371.0
CMS1_k127_346843_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 613.0
CMS1_k127_346843_2 belongs to the bacterial solute-binding protein 3 family K02030,K10014,K10022 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 484.0
CMS1_k127_346843_3 ATP-binding protein K02028,K10025 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 469.0
CMS1_k127_346843_4 transporter, permease K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 457.0
CMS1_k127_346843_5 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 458.0
CMS1_k127_346843_6 (ABC) transporter K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 406.0
CMS1_k127_346843_7 transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 287.0
CMS1_k127_3472761_0 in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor K14260 - 2.6.1.2,2.6.1.66 9.874e-239 739.0
CMS1_k127_3472761_1 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 412.0
CMS1_k127_3472761_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000602 214.0
CMS1_k127_3485520_0 Belongs to the glutamate synthase family - - - 1.832e-272 841.0
CMS1_k127_3485520_1 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001184 293.0
CMS1_k127_3503592_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1214.0
CMS1_k127_3503592_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.295e-261 806.0
CMS1_k127_3503592_2 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000057 272.0
CMS1_k127_3524713_0 Histidine kinase-like ATPases - - - 1.081e-246 767.0
CMS1_k127_3524713_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 6.108e-218 679.0
CMS1_k127_3524713_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 529.0
CMS1_k127_3524713_3 PFAM response regulator receiver, transcriptional regulator domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 424.0
CMS1_k127_3524713_4 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 419.0
CMS1_k127_3524713_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 302.0
CMS1_k127_3524713_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 294.0
CMS1_k127_3524713_7 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007309 291.0
CMS1_k127_3524713_8 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000002519 249.0
CMS1_k127_3524713_9 - - - - 0.0000000000000000000000000000002232 128.0
CMS1_k127_352717_0 Belongs to the UPF0176 family K07146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 581.0
CMS1_k127_352717_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 531.0
CMS1_k127_352717_2 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 495.0
CMS1_k127_352717_3 Ethylbenzene dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 364.0
CMS1_k127_3551608_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 502.0
CMS1_k127_3551608_1 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 388.0
CMS1_k127_3553571_0 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 2.895e-252 782.0
CMS1_k127_3553571_1 FAD dependent oxidoreductase K09471 - - 3.905e-220 688.0
CMS1_k127_3553571_2 diguanylate cyclase - - - 6.277e-216 679.0
CMS1_k127_3553571_3 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 509.0
CMS1_k127_3553571_4 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 458.0
CMS1_k127_3553571_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 321.0
CMS1_k127_3553571_6 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
CMS1_k127_3553571_7 formate dehydrogenase K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000007668 196.0
CMS1_k127_3553571_8 cold-shock protein K03704 - - 0.00000000000000000000000000000000000006691 142.0
CMS1_k127_3553571_9 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.000000000000000000000000000000004363 128.0
CMS1_k127_3574024_0 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 488.0
CMS1_k127_3574024_1 Iron-sulphur cluster biosynthesis K13628 - - 0.0000000000000000000000000000000000000000000002301 170.0
CMS1_k127_3574024_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000001974 59.0
CMS1_k127_3580116_0 Domain of unknown function (DUF4336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 351.0
CMS1_k127_3580116_1 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.000000000000000000000000000000006041 131.0
CMS1_k127_3580116_2 Putative diguanylate phosphodiesterase - - - 0.000000000000001809 79.0
CMS1_k127_358967_0 (Lipo)protein K07121 - - 3.418e-292 906.0
CMS1_k127_358967_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 512.0
CMS1_k127_358967_10 - - - - 0.00000000001328 65.0
CMS1_k127_358967_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 382.0
CMS1_k127_358967_3 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 314.0
CMS1_k127_358967_4 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000003087 135.0
CMS1_k127_358967_5 ggdef domain - - - 0.00000000000000000000000003018 112.0
CMS1_k127_358967_6 Phage integrase family - - - 0.00000000000000000000002285 102.0
CMS1_k127_358967_7 - - - - 0.0000000000001705 71.0
CMS1_k127_358967_8 - - - - 0.0000000000004662 70.0
CMS1_k127_358967_9 Phage integrase family - - - 0.000000000006074 68.0
CMS1_k127_3594313_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.779e-276 854.0
CMS1_k127_3594313_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 2.747e-216 677.0
CMS1_k127_3594313_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 395.0
CMS1_k127_360114_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.0 1164.0
CMS1_k127_360114_1 Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate K15736 - - 2.412e-256 792.0
CMS1_k127_360114_2 diguanylate cyclase - - - 1.029e-209 671.0
CMS1_k127_360114_3 CsiD K15737 - - 8.856e-197 615.0
CMS1_k127_360114_4 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 385.0
CMS1_k127_360114_5 transcriptional regulator K15735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 369.0
CMS1_k127_360114_6 NnrU protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 318.0
CMS1_k127_360114_7 - - - - 0.00000000000000000000000000000000000000001304 160.0
CMS1_k127_3603219_0 ABC transporter transmembrane region - - - 4.327e-235 739.0
CMS1_k127_3603219_1 Histidine kinase-like ATPases - - - 2.484e-220 690.0
CMS1_k127_3603219_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 450.0
CMS1_k127_3603219_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 464.0
CMS1_k127_3603219_4 regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 364.0
CMS1_k127_3603219_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 311.0
CMS1_k127_3603219_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001486 262.0
CMS1_k127_3603219_7 - - - - 0.00000000000000000000000000000000000000000000000000000000006894 206.0
CMS1_k127_3603219_8 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000001254 175.0
CMS1_k127_3603219_9 peptidase - - - 0.0000000000000000000000000000000001884 135.0
CMS1_k127_3614410_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 571.0
CMS1_k127_3614410_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 535.0
CMS1_k127_3614410_2 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 451.0
CMS1_k127_3614410_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 369.0
CMS1_k127_3614410_4 Maf-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 306.0
CMS1_k127_3614410_5 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 285.0
CMS1_k127_3614410_6 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000001346 182.0
CMS1_k127_3614410_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000000001047 142.0
CMS1_k127_3614410_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000003009 117.0
CMS1_k127_3614410_9 transcriptional regulator - - - 0.000000000000000003183 87.0
CMS1_k127_3616888_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1034.0
CMS1_k127_3616888_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 7.373e-248 766.0
CMS1_k127_3616888_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 2.946e-210 655.0
CMS1_k127_3616888_3 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000000000000000000000000000001639 215.0
CMS1_k127_3616888_4 - - - - 0.000000000000000000000000000000000000000000000000000000000002005 210.0
CMS1_k127_3619135_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 431.0
CMS1_k127_3619135_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 421.0
CMS1_k127_3619135_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 347.0
CMS1_k127_3619135_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001592 261.0
CMS1_k127_3625427_0 chemotaxis, protein - - - 0.0000000000000000000000000000000000000000000000003161 184.0
CMS1_k127_3626635_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 4.417e-222 691.0
CMS1_k127_3626635_1 Histidine kinase K15011 - 2.7.13.3 7.074e-221 691.0
CMS1_k127_3626635_2 Cobalt uptake substrate-specific transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 398.0
CMS1_k127_3626635_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 303.0
CMS1_k127_3626635_5 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000000000000000000000000000000000000000000000000000000000000077 232.0
CMS1_k127_3626635_6 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008999,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017189,GO:0018193,GO:0018194,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.0000000000000000000000000000442 123.0
CMS1_k127_363353_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1298.0
CMS1_k127_363353_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1111.0
CMS1_k127_363353_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 329.0
CMS1_k127_363353_11 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 305.0
CMS1_k127_363353_12 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 286.0
CMS1_k127_363353_13 CreA protein K05805 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002043 247.0
CMS1_k127_363353_14 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000373 235.0
CMS1_k127_363353_16 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000000000000000000000000000003245 180.0
CMS1_k127_363353_17 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000000004381 173.0
CMS1_k127_363353_2 Participates in both transcription termination and antitermination K02600 - - 1.315e-287 887.0
CMS1_k127_363353_3 Belongs to the thiolase family K00626 - 2.3.1.9 2.883e-234 727.0
CMS1_k127_363353_4 Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle K00564 - 2.1.1.172 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 571.0
CMS1_k127_363353_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 547.0
CMS1_k127_363353_6 COG0720 6-pyruvoyl-tetrahydropterin synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 512.0
CMS1_k127_363353_7 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 464.0
CMS1_k127_363353_8 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 398.0
CMS1_k127_363353_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 396.0
CMS1_k127_3633615_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2700.0
CMS1_k127_3633615_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2606.0
CMS1_k127_3633615_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1302.0
CMS1_k127_3633615_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 298.0
CMS1_k127_3633615_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001889 250.0
CMS1_k127_3633615_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000003605 195.0
CMS1_k127_3633615_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000001136 85.0
CMS1_k127_3635582_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.002e-262 811.0
CMS1_k127_3635582_1 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 595.0
CMS1_k127_3635582_2 membrane K08974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 493.0
CMS1_k127_3635582_3 RNA polymerase sigma factor RpoS K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 482.0
CMS1_k127_3635582_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 439.0
CMS1_k127_3635582_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 409.0
CMS1_k127_3635582_6 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 357.0
CMS1_k127_3635582_7 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006759 338.0
CMS1_k127_3635582_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000000000000001078 169.0
CMS1_k127_3639268_0 The M ring may be actively involved in energy transduction K02409 - - 3.666e-266 824.0
CMS1_k127_3639268_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 467.0
CMS1_k127_3639268_2 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 302.0
CMS1_k127_3643292_0 Histidine kinase K07678,K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 423.0
CMS1_k127_3643292_1 Protein of unknown function (DUF2489) - - - 0.00000000000000000000000000000000000000000000000000000001482 202.0
CMS1_k127_3643292_2 - - - - 0.00000000000000000000000000000000000000000000000005125 180.0
CMS1_k127_3648595_0 Methionine synthase K00548 - 2.1.1.13 0.0 1233.0
CMS1_k127_3648595_1 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 423.0
CMS1_k127_3648595_2 Cupredoxin-like domain - - - 0.00000000000000000000000000000000000006257 142.0
CMS1_k127_3657971_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 4.731e-280 864.0
CMS1_k127_3657971_1 Permease K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 552.0
CMS1_k127_3667215_0 cheY-homologous receiver domain - - - 3.298e-287 888.0
CMS1_k127_3667215_1 deacetylase - - - 8.796e-198 617.0
CMS1_k127_3667215_2 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 366.0
CMS1_k127_3667215_3 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001607 273.0
CMS1_k127_3668664_0 COG0845 Membrane-fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 600.0
CMS1_k127_3668664_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 376.0
CMS1_k127_3668664_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000003267 173.0
CMS1_k127_3668858_0 Belongs to the binding-protein-dependent transport system permease family K11961 - - 7.256e-226 703.0
CMS1_k127_3668858_1 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 386.0
CMS1_k127_3668858_2 ABC transporter, ATP-binding protein K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 357.0
CMS1_k127_3671825_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.0 1016.0
CMS1_k127_3671825_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 508.0
CMS1_k127_3671825_2 hydrolase K20881 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 399.0
CMS1_k127_3671825_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K08312 - - 0.000000000000000000000000000000000000000000000000000000000000000000001103 241.0
CMS1_k127_3671825_4 Belongs to the HSP15 family K04762 - - 0.0000000000000000000000000000000000000000000000000000000000087 209.0
CMS1_k127_3671825_5 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000003074 96.0
CMS1_k127_3675582_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1319.0
CMS1_k127_3675582_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.536e-301 934.0
CMS1_k127_3675582_10 Phenylacetic acid degradation protein PaaY K02617,K08279 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 322.0
CMS1_k127_3675582_11 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
CMS1_k127_3675582_12 NmrA-like family K07118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002535 273.0
CMS1_k127_3675582_14 PilZ domain - - - 0.0000000000000001416 85.0
CMS1_k127_3675582_2 NADH dehydrogenase K03885 - 1.6.99.3 3.707e-240 746.0
CMS1_k127_3675582_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 6.902e-220 683.0
CMS1_k127_3675582_4 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 600.0
CMS1_k127_3675582_5 transcriptional regulator K17737 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 525.0
CMS1_k127_3675582_6 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 524.0
CMS1_k127_3675582_7 transferase K01027,K01028 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 456.0
CMS1_k127_3675582_8 transferase K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 419.0
CMS1_k127_3675582_9 COG1335 Amidases related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007205 324.0
CMS1_k127_3675617_0 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 517.0
CMS1_k127_3675617_1 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 377.0
CMS1_k127_3675617_2 IMP dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 368.0
CMS1_k127_3678701_0 argininosuccinate lyase K01755 - 4.3.2.1 1.868e-290 893.0
CMS1_k127_3678701_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 2.526e-247 767.0
CMS1_k127_3678701_10 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 457.0
CMS1_k127_3678701_11 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 434.0
CMS1_k127_3678701_12 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 415.0
CMS1_k127_3678701_13 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 384.0
CMS1_k127_3678701_14 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 346.0
CMS1_k127_3678701_15 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 340.0
CMS1_k127_3678701_16 ACT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004459 253.0
CMS1_k127_3678701_17 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001923 244.0
CMS1_k127_3678701_18 COG1587 Uroporphyrinogen-III synthase K01719 GO:0003674,GO:0003824,GO:0004852,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000004803 242.0
CMS1_k127_3678701_19 COG0517 FOG CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001549 226.0
CMS1_k127_3678701_2 SAM-dependent K06969 - 2.1.1.191 1.293e-242 751.0
CMS1_k127_3678701_20 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000006041 124.0
CMS1_k127_3678701_21 phosphoserine phosphatase - - - 0.0000000000000000000006164 95.0
CMS1_k127_3678701_23 - - - - 0.000000000000101 71.0
CMS1_k127_3678701_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 4.098e-230 718.0
CMS1_k127_3678701_4 biosynthesis protein HemY K02498 - - 1.614e-222 694.0
CMS1_k127_3678701_5 hydroxylase K18800 - - 2.298e-221 692.0
CMS1_k127_3678701_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 3.687e-217 676.0
CMS1_k127_3678701_7 Aldo keto reductase - - - 1.903e-198 621.0
CMS1_k127_3678701_8 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 575.0
CMS1_k127_3678701_9 enzyme of heme biosynthesis K02496 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 572.0
CMS1_k127_3680902_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta K01969 - 6.4.1.4 0.0 1032.0
CMS1_k127_3680902_1 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 1.799e-312 959.0
CMS1_k127_3680902_2 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 1.733e-242 752.0
CMS1_k127_3680902_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 3.039e-228 711.0
CMS1_k127_3680902_4 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 498.0
CMS1_k127_3680902_5 enoyl-CoA hydratase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 467.0
CMS1_k127_3680902_6 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 439.0
CMS1_k127_3680902_7 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000101 203.0
CMS1_k127_3680902_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000001132 60.0
CMS1_k127_36884_0 Creatinase/Prolidase N-terminal domain K08688 - 3.5.3.3 1.141e-234 730.0
CMS1_k127_36884_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 1.37e-209 658.0
CMS1_k127_36884_2 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 415.0
CMS1_k127_36884_3 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 413.0
CMS1_k127_36884_4 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 349.0
CMS1_k127_36884_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000001589 206.0
CMS1_k127_36884_6 branched-chain amino acid - - - 0.0000000000000000000000001319 109.0
CMS1_k127_36884_7 Branched-chain amino acid permease - - - 0.00000000006293 64.0
CMS1_k127_36884_8 COG2716 Glycine cleavage system regulatory protein - - - 0.00003742 53.0
CMS1_k127_3696151_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002109 270.0
CMS1_k127_3696151_1 Protein of unknown function (DUF3095) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001609 244.0
CMS1_k127_3699394_0 Acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.0 2002.0
CMS1_k127_3699394_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 2.838e-256 793.0
CMS1_k127_3699394_2 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 523.0
CMS1_k127_3699394_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 464.0
CMS1_k127_3699394_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 403.0
CMS1_k127_3699394_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 404.0
CMS1_k127_3699394_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000922 391.0
CMS1_k127_3699394_7 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002013 270.0
CMS1_k127_3699394_8 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.000000000000000000000000000000000000000000000000000000000000007235 220.0
CMS1_k127_3699394_9 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000003184 211.0
CMS1_k127_3700651_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1319.0
CMS1_k127_3700651_1 response regulator K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 593.0
CMS1_k127_3700651_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 413.0
CMS1_k127_3700651_3 Belongs to the peptidase S1B family K04775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002673 248.0
CMS1_k127_3702204_0 Sulfatase-modifying factor enzyme 1 - - - 0.0 1074.0
CMS1_k127_3702204_1 Domain of unknown function (DUF4139) - - - 4.877e-221 693.0
CMS1_k127_3702204_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 298.0
CMS1_k127_3702298_0 Catalyzes the oxidation of dihydrolipoamide to lipoamide K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 318.0
CMS1_k127_3702298_1 auxin efflux carrier K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 305.0
CMS1_k127_3702298_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000002891 180.0
CMS1_k127_3707668_0 phospholipid glycerol acyltransferase - - - 0.0 1023.0
CMS1_k127_3707668_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 546.0
CMS1_k127_3707668_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 463.0
CMS1_k127_3707668_3 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 384.0
CMS1_k127_3707668_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 385.0
CMS1_k127_3707668_5 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 312.0
CMS1_k127_3707668_6 His Kinase A (phosphoacceptor) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 299.0
CMS1_k127_3707668_7 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000514 176.0
CMS1_k127_3707668_9 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000000000000000000001374 115.0
CMS1_k127_3708663_0 Diguanylate cyclase - - - 0.0 1525.0
CMS1_k127_3708663_1 cation transport ATPase - - - 0.0 1389.0
CMS1_k127_3708663_10 Lysine methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000756 284.0
CMS1_k127_3708663_11 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K13694,K13695 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000007544 219.0
CMS1_k127_3708663_12 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000000000000000000168 213.0
CMS1_k127_3708663_13 - - - - 0.000000000000000000000000000000000000000000000000004032 183.0
CMS1_k127_3708663_14 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000001418 73.0
CMS1_k127_3708663_2 ABC transporter K18893 - - 0.0 1086.0
CMS1_k127_3708663_3 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 499.0
CMS1_k127_3708663_4 Response regulator receiver K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 439.0
CMS1_k127_3708663_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 424.0
CMS1_k127_3708663_6 endonuclease I K01150 - 3.1.21.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 394.0
CMS1_k127_3708663_7 Uncharacterised protein family (UPF0014) K02069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 391.0
CMS1_k127_3708663_8 Threonine transporter RhtB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 318.0
CMS1_k127_3708663_9 Protein of unknown function (DUF2947) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 293.0
CMS1_k127_3733904_0 GGDEF domain - - - 1.42e-260 818.0
CMS1_k127_3733904_1 YcjX-like family, DUF463 K06918 - - 9.217e-250 775.0
CMS1_k127_3733904_2 STAS domain K03321 - - 1.204e-207 661.0
CMS1_k127_3733904_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 416.0
CMS1_k127_3733904_4 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006275 244.0
CMS1_k127_3733904_5 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000000000000006867 218.0
CMS1_k127_3733904_6 Domain of unknown function (DUF697) K08990 - - 0.0000000000000000000000000000000002297 145.0
CMS1_k127_3736307_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.0 1054.0
CMS1_k127_3736307_1 Na+/H+ antiporter 1 - - - 1.559e-223 700.0
CMS1_k127_3736307_10 Methyltransferase K07443 - - 0.00000000000000000000000000000000000000000005726 162.0
CMS1_k127_3736307_11 YfcL protein - - - 0.0000000000000000000000000002332 116.0
CMS1_k127_3736307_12 - - - - 0.00000000000000000004592 94.0
CMS1_k127_3736307_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 4.029e-212 661.0
CMS1_k127_3736307_3 protein conserved in bacteria K09938 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 514.0
CMS1_k127_3736307_4 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 423.0
CMS1_k127_3736307_5 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 383.0
CMS1_k127_3736307_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 373.0
CMS1_k127_3736307_7 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 310.0
CMS1_k127_3736307_8 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004066 254.0
CMS1_k127_3736307_9 Immunity protein 22 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006195 249.0
CMS1_k127_374712_0 Belongs to the glutamate synthase family K22083 - 2.1.1.21 3.982e-284 878.0
CMS1_k127_374712_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 419.0
CMS1_k127_374712_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 388.0
CMS1_k127_374712_3 Haloacid dehalogenase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 356.0
CMS1_k127_374712_4 Belongs to the pirin family K06911 - - 0.00000000000000000000004013 99.0
CMS1_k127_3750617_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 0.0 1033.0
CMS1_k127_3750617_1 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 599.0
CMS1_k127_3750617_2 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 495.0
CMS1_k127_3750617_3 Belongs to the enoyl-CoA hydratase isomerase family K08299 - 4.2.1.149 0.0000000000000000003025 86.0
CMS1_k127_376414_0 LapD/MoxY periplasmic domain - - - 4.66e-239 746.0
CMS1_k127_376414_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 2.241e-213 664.0
CMS1_k127_376414_2 RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities K03607 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002188 252.0
CMS1_k127_376414_3 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000000001478 171.0
CMS1_k127_376414_4 Sulfur carrier protein TusA K04085 - - 0.000000000000000000000000000000000000009839 145.0
CMS1_k127_376414_5 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000002266 64.0
CMS1_k127_3766595_0 Involved in the processing of the 5'end of 16S rRNA K08301 - - 1.339e-292 900.0
CMS1_k127_3766595_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.62e-245 760.0
CMS1_k127_3766595_2 Rod shape-determining protein K03569 - - 7.896e-215 668.0
CMS1_k127_3766595_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 478.0
CMS1_k127_3766595_4 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 290.0
CMS1_k127_3766595_5 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000156 273.0
CMS1_k127_3766595_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000008237 170.0
CMS1_k127_3806405_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.0 1192.0
CMS1_k127_3806405_1 Domain of Unknown Function (DUF748) - - - 0.0 1085.0
CMS1_k127_3806405_10 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component K11689 - - 0.00000000000004705 73.0
CMS1_k127_3806405_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 3.983e-295 909.0
CMS1_k127_3806405_3 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 2.352e-263 815.0
CMS1_k127_3806405_4 Histidine kinase K07675,K20263 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 4.402e-199 627.0
CMS1_k127_3806405_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 411.0
CMS1_k127_3806405_6 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 393.0
CMS1_k127_3806405_7 COG2755 Lysophospholipase L1 and related esterases K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001325 286.0
CMS1_k127_3806405_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003368 278.0
CMS1_k127_3811026_0 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 454.0
CMS1_k127_3811026_1 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 379.0
CMS1_k127_3811026_2 Alpha beta hydrolase K01175 - - 0.000000000000000000000000000000000000000000000000000000000002665 210.0
CMS1_k127_3811026_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000001653 124.0
CMS1_k127_3824764_0 3-methyladenine DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 397.0
CMS1_k127_3824764_1 Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function K15723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 310.0
CMS1_k127_3824764_2 Uncharacterized lipoprotein K07286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002845 278.0
CMS1_k127_3828174_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 1.153e-220 689.0
CMS1_k127_3828174_1 COG2771 DNA-binding HTH domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 365.0
CMS1_k127_3828174_2 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000000000000009769 171.0
CMS1_k127_3828174_3 COG0421 Spermidine synthase - - - 0.0000000000000000000001397 97.0
CMS1_k127_3840629_0 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 589.0
CMS1_k127_3840629_1 ornithine cyclodeaminase K01750,K19742 - 1.5.1.49,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 539.0
CMS1_k127_3840629_2 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 431.0
CMS1_k127_3840629_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 308.0
CMS1_k127_3840629_4 exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000004198 188.0
CMS1_k127_3840629_5 - - - - 0.00000000002157 64.0
CMS1_k127_3843982_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1175.0
CMS1_k127_3843982_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 5.47e-265 822.0
CMS1_k127_3843982_2 Bacterial extracellular solute-binding protein, family 7 - - - 9.414e-204 638.0
CMS1_k127_3843982_3 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 431.0
CMS1_k127_3843982_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 380.0
CMS1_k127_3843982_5 FCD K11474 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 360.0
CMS1_k127_3843982_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000216 123.0
CMS1_k127_3853709_0 His Kinase A (phosphoacceptor) domain - - - 2.067e-306 962.0
CMS1_k127_3853709_1 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 6.638e-290 898.0
CMS1_k127_3853709_2 Branched-chain amino acid transport system / permease component K02057,K10553,K17203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 488.0
CMS1_k127_3853709_3 ATPases associated with a variety of cellular activities K02056,K10441,K10545 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 439.0
CMS1_k127_3853709_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 391.0
CMS1_k127_3853709_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 355.0
CMS1_k127_3853709_6 PFAM Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 326.0
CMS1_k127_3853709_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000007241 161.0
CMS1_k127_3853709_8 PQ loop repeat K15383 - - 0.0000000000000000007023 90.0
CMS1_k127_3854624_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1336.0
CMS1_k127_3854624_1 P-type ATPase K17686 - 3.6.3.54 6.31e-289 894.0
CMS1_k127_3854624_2 Rieske [2Fe-2S] domain K22325 - 1.14.15.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 407.0
CMS1_k127_3854624_3 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 340.0
CMS1_k127_3854624_4 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 319.0
CMS1_k127_3854624_5 metal-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005075 265.0
CMS1_k127_3854624_6 Activator of copper-responsive regulon genes K08365 - - 0.0000000000000000000000000000000000000000000000000000000000000000001842 231.0
CMS1_k127_3854624_7 Cytochrome c - - - 0.00000000000000000000000000000000000000000003746 164.0
CMS1_k127_3855013_0 Sulfite reductase - - - 0.0 1062.0
CMS1_k127_3855013_1 Part of a membrane complex involved in electron transport K03615 - - 0.0 1016.0
CMS1_k127_3855013_10 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000000000000002137 183.0
CMS1_k127_3855013_11 - - - - 0.000000000000000000000000000000000000000000003853 169.0
CMS1_k127_3855013_12 protein conserved in bacteria - - - 0.0000000000000000000000000000007606 131.0
CMS1_k127_3855013_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 4.228e-317 977.0
CMS1_k127_3855013_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 2.883e-279 863.0
CMS1_k127_3855013_4 Sulfate adenylyltransferase subunit 2 K00957 - 2.7.7.4 1.078e-195 611.0
CMS1_k127_3855013_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 471.0
CMS1_k127_3855013_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 471.0
CMS1_k127_3855013_7 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 401.0
CMS1_k127_3855013_8 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 389.0
CMS1_k127_3855013_9 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 345.0
CMS1_k127_3871518_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1733.0
CMS1_k127_3871518_1 Circularly permuted ATP-grasp type 2 - - - 6.991e-311 974.0
CMS1_k127_3871518_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 496.0
CMS1_k127_3871518_3 COG1305 Transglutaminase-like enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 405.0
CMS1_k127_3871518_4 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009014 243.0
CMS1_k127_3871518_5 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000000000000000002733 185.0
CMS1_k127_3895110_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 604.0
CMS1_k127_3895110_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 495.0
CMS1_k127_3895110_2 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 361.0
CMS1_k127_3906059_0 P-type ATPase K01533 - 3.6.3.4 0.0 1170.0
CMS1_k127_3906059_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 2.73e-308 945.0
CMS1_k127_3906059_2 COG0348 Polyferredoxin - - - 1.311e-262 814.0
CMS1_k127_3906059_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 529.0
CMS1_k127_3906059_4 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 390.0
CMS1_k127_3906059_5 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006998 322.0
CMS1_k127_3906059_6 protein conserved in bacteria K09926 - - 0.0000000000000000000000000000000000000000000000000000000000000001963 225.0
CMS1_k127_3906059_7 Cytochrome oxidase maturation protein - - - 0.0000000000000000000000002159 106.0
CMS1_k127_3906059_8 Cbb3-type cytochrome oxidase component FixQ - - - 0.00000000000000000009651 89.0
CMS1_k127_3906059_9 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000001224 77.0
CMS1_k127_3907252_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 490.0
CMS1_k127_3907252_1 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 415.0
CMS1_k127_3907252_2 sodium proton antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 353.0
CMS1_k127_3907252_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000254 214.0
CMS1_k127_3911144_0 COG0147 Anthranilate para-aminobenzoate synthases component I K01665 - 2.6.1.85 6.778e-231 721.0
CMS1_k127_3911144_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 569.0
CMS1_k127_3911144_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 531.0
CMS1_k127_3911144_3 GntR family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 424.0
CMS1_k127_3911144_4 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.00000174 51.0
CMS1_k127_3913708_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0 1234.0
CMS1_k127_3913708_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000001274 230.0
CMS1_k127_3918811_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 3.493e-220 686.0
CMS1_k127_3918811_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 570.0
CMS1_k127_3918811_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 560.0
CMS1_k127_3918811_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 299.0
CMS1_k127_3918811_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000005609 77.0
CMS1_k127_3931974_0 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 387.0
CMS1_k127_3931974_1 Paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 344.0
CMS1_k127_3931974_2 paraquat-inducible protein A - - - 0.0000000000000000000000000000000005567 136.0
CMS1_k127_3937750_0 ATPase components of ABC transporters with duplicated ATPase domains - - - 2.482e-316 972.0
CMS1_k127_3937750_1 OsmC-like protein K06889,K07397 - - 6.11e-220 687.0
CMS1_k127_3937750_2 diguanylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 349.0
CMS1_k127_3937750_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 319.0
CMS1_k127_3937750_4 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 310.0
CMS1_k127_3937750_5 Elongation factor - - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
CMS1_k127_3937750_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000002165 198.0
CMS1_k127_3937750_7 Ion transport protein - - - 0.00000000000000000000000000001067 119.0
CMS1_k127_3937750_8 - - - - 0.000000000622 63.0
CMS1_k127_3949433_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1497.0
CMS1_k127_3949433_1 forms a homodimer and then a multimeric complex with NrdA K00526 - 1.17.4.1 1.16e-231 718.0
CMS1_k127_3949433_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 442.0
CMS1_k127_3949433_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 415.0
CMS1_k127_3949433_4 2Fe-2S iron-sulfur cluster binding domain K11107 - - 0.0000000000000000000000000000000000000000000000000345 179.0
CMS1_k127_3949433_5 - - - - 0.00000000000000000000000000000000000000004682 154.0
CMS1_k127_3949433_6 DNA-binding protein VF530 - - - 0.0000000000000000000000000000000001803 133.0
CMS1_k127_3949433_7 - - - - 0.00000000000000000000000000000002057 128.0
CMS1_k127_3949433_8 - - - - 0.000000000000003944 76.0
CMS1_k127_3949433_9 Protein of unknown function (DUF2986) - - - 0.0000000005207 62.0
CMS1_k127_3960792_0 AMP-binding enzyme C-terminal domain K00666 - - 8.109e-306 942.0
CMS1_k127_3960792_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 2.355e-272 842.0
CMS1_k127_3960792_10 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 437.0
CMS1_k127_3960792_11 KR domain K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 433.0
CMS1_k127_3960792_12 protein conserved in bacteria K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 400.0
CMS1_k127_3960792_13 Aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 359.0
CMS1_k127_3960792_14 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 355.0
CMS1_k127_3960792_15 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 333.0
CMS1_k127_3960792_16 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 324.0
CMS1_k127_3960792_17 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 323.0
CMS1_k127_3960792_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005169 263.0
CMS1_k127_3960792_19 dehydratase K17865 - 4.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000001809 254.0
CMS1_k127_3960792_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 6.295e-257 794.0
CMS1_k127_3960792_20 Belongs to the frataxin family K06202 - - 0.000000000000000000000000000000000000000000000000008455 182.0
CMS1_k127_3960792_21 hydrolase K20862 - 3.1.3.102,3.1.3.104 0.000000000000000000000000000000000000001275 157.0
CMS1_k127_3960792_22 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000001256 80.0
CMS1_k127_3960792_3 COG2202 FOG PAS PAC domain - - - 2.99e-248 776.0
CMS1_k127_3960792_4 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 1.231e-214 675.0
CMS1_k127_3960792_5 COG0578 Glycerol-3-phosphate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 607.0
CMS1_k127_3960792_6 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 600.0
CMS1_k127_3960792_7 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 544.0
CMS1_k127_3960792_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 527.0
CMS1_k127_3960792_9 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 512.0
CMS1_k127_3967447_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.192e-195 612.0
CMS1_k127_3967447_1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 516.0
CMS1_k127_3967447_2 Domain of unknown function (DUF1853) K09977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 415.0
CMS1_k127_3967447_3 - - - - 0.000000000000000000000000000000000000000002427 157.0
CMS1_k127_3967447_4 - - - - 0.0000000000004479 70.0
CMS1_k127_3967670_0 permease - - - 0.0 1257.0
CMS1_k127_3967670_1 C4-dicarboxylate ABC transporter substrate-binding protein K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 606.0
CMS1_k127_3967670_2 Bacterial regulatory protein, Fis family K10126 - - 0.0000000000000000000000000000000000005094 141.0
CMS1_k127_397598_0 Part of a membrane complex involved in electron transport K03614 - - 2.034e-208 649.0
CMS1_k127_397598_1 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 413.0
CMS1_k127_397598_2 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 352.0
CMS1_k127_397598_3 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 329.0
CMS1_k127_3985052_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1291.0
CMS1_k127_3985052_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0 1134.0
CMS1_k127_3985052_10 Protein of unknown function (DUF2835) - - - 0.000000000000000000000000000009669 119.0
CMS1_k127_3985052_11 During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) K03812 - - 0.000000000000000000000000000122 115.0
CMS1_k127_3985052_12 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000415 68.0
CMS1_k127_3985052_13 - - - - 0.000002452 55.0
CMS1_k127_3985052_2 Ammonium transporter K03320 - - 4.172e-244 757.0
CMS1_k127_3985052_3 Oxygen tolerance - - - 3.637e-220 696.0
CMS1_k127_3985052_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 601.0
CMS1_k127_3985052_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 520.0
CMS1_k127_3985052_6 nucleoside-diphosphate sugar epimerase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 467.0
CMS1_k127_3985052_7 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 362.0
CMS1_k127_3985052_8 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 344.0
CMS1_k127_3985052_9 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000002538 224.0
CMS1_k127_3987508_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1359.0
CMS1_k127_3987508_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1311.0
CMS1_k127_3987508_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 286.0
CMS1_k127_3987508_11 pilus assembly protein PilP K02665 - - 0.00000000000000000000000000000000000000000000000000000007475 200.0
CMS1_k127_3987508_12 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000004408 141.0
CMS1_k127_3987508_2 Type II and III secretion system protein K02507,K02666 - - 0.0 1146.0
CMS1_k127_3987508_3 Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01887 - 6.1.1.19 0.0 1067.0
CMS1_k127_3987508_4 Malate dehydrogenase K00027,K00029 - 1.1.1.38,1.1.1.40 1.513e-252 781.0
CMS1_k127_3987508_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 7.239e-201 629.0
CMS1_k127_3987508_6 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 578.0
CMS1_k127_3987508_7 AAA domain K03112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 434.0
CMS1_k127_3987508_8 Pilus assembly protein PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 349.0
CMS1_k127_3987508_9 pilus assembly protein PilN K02663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 300.0
CMS1_k127_3991625_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.77e-282 871.0
CMS1_k127_3991625_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 4.353e-250 774.0
CMS1_k127_3991625_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 5.258e-199 624.0
CMS1_k127_3991625_3 protein conserved in bacteria K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 346.0
CMS1_k127_3991625_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 338.0
CMS1_k127_3991625_5 Tetratricopeptide repeat K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004898 274.0
CMS1_k127_3999481_0 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 466.0
CMS1_k127_3999481_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000004337 244.0
CMS1_k127_3999481_2 MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001945 244.0
CMS1_k127_3999481_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000000000000008605 137.0
CMS1_k127_4002725_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 4.019e-209 651.0
CMS1_k127_4002725_1 Chloride channel - - - 1.288e-198 623.0
CMS1_k127_4002725_2 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916 - 1.14.12.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 488.0
CMS1_k127_4002725_3 iron-sulfur cluster insertion protein erpA K15724 - - 0.00000000000000000000000000000000000000000000000000000000000004747 214.0
CMS1_k127_4002725_4 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000004005 179.0
CMS1_k127_4002725_5 Transcriptional regulator K13771 - - 0.000000000000000000000000000000000000000000000171 172.0
CMS1_k127_4002725_6 hemerythrin HHE cation binding domain - - - 0.0000000000000002549 83.0
CMS1_k127_4002725_7 - - - - 0.00000000000001215 76.0
CMS1_k127_4010240_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.0 1253.0
CMS1_k127_4010240_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004593 276.0
CMS1_k127_4010240_2 phospholipase C K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000002358 237.0
CMS1_k127_4010240_3 Cupredoxin-like domain - - - 0.0000000000000000000000000000000000000000000008542 167.0
CMS1_k127_4010240_5 - - - - 0.00000000000006527 74.0
CMS1_k127_4010240_6 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.000002832 49.0
CMS1_k127_4019078_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 571.0
CMS1_k127_4019078_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 541.0
CMS1_k127_4019078_11 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000000004937 154.0
CMS1_k127_4019078_2 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 509.0
CMS1_k127_4019078_3 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 450.0
CMS1_k127_4019078_4 Oxidoreductase FAD-binding domain K11311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 410.0
CMS1_k127_4019078_5 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007515 368.0
CMS1_k127_4019078_6 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 298.0
CMS1_k127_4019078_7 redox protein, regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001817 269.0
CMS1_k127_4019078_8 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003397 253.0
CMS1_k127_4019078_9 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006023 248.0
CMS1_k127_4027617_0 SRP54-type protein, GTPase domain K02404 - - 3.189e-238 745.0
CMS1_k127_4027617_1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 490.0
CMS1_k127_4027617_2 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000003412 212.0
CMS1_k127_4027617_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000002985 57.0
CMS1_k127_4028428_0 binding-protein-dependent transport systems inner membrane component K11075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 559.0
CMS1_k127_4028428_1 ABC transporter permease K11070,K11074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 458.0
CMS1_k127_4028428_2 transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 445.0
CMS1_k127_4028428_3 glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 385.0
CMS1_k127_4028428_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 375.0
CMS1_k127_4028428_5 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 288.0
CMS1_k127_4028441_0 MMPL family K07003 - - 0.0 1459.0
CMS1_k127_4028441_1 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K18365 - 4.1.3.39,4.1.3.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 601.0
CMS1_k127_4028441_10 protein 4-oxalocrotonate tautomerase homolog - - - 0.0000000000000000000000000000000003646 135.0
CMS1_k127_4028441_11 protein 4-oxalocrotonate tautomerase homolog K01821 - 5.3.2.6 0.0000000000009902 70.0
CMS1_k127_4028441_2 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K18366 - 1.2.1.10,1.2.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 545.0
CMS1_k127_4028441_3 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 459.0
CMS1_k127_4028441_4 COG3971 2-keto-4-pentenoate hydratase K01617 - 4.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 442.0
CMS1_k127_4028441_5 hydratase K18364 - 4.2.1.132,4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 396.0
CMS1_k127_4028441_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 396.0
CMS1_k127_4028441_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 351.0
CMS1_k127_4028441_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 332.0
CMS1_k127_4028441_9 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000002047 136.0
CMS1_k127_404080_0 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.0 1526.0
CMS1_k127_404080_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.163e-249 772.0
CMS1_k127_404080_2 Major facilitator K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 595.0
CMS1_k127_404080_3 COG2267 Lysophospholipase K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 548.0
CMS1_k127_404080_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 467.0
CMS1_k127_404080_5 Acyl-ACP thioesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004947 238.0
CMS1_k127_404080_6 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000278 179.0
CMS1_k127_404080_7 membrane - - - 0.0000000000000000000000000000000392 126.0
CMS1_k127_4050561_0 zinc metalloprotease K11749 - - 2.629e-221 692.0
CMS1_k127_4050561_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 568.0
CMS1_k127_4050561_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 495.0
CMS1_k127_4050561_3 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 488.0
CMS1_k127_4050561_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 482.0
CMS1_k127_4050561_5 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 476.0
CMS1_k127_4050561_6 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 475.0
CMS1_k127_4050561_7 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001247 267.0
CMS1_k127_4050561_8 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001207 254.0
CMS1_k127_4050561_9 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000001649 235.0
CMS1_k127_4066853_0 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 301.0
CMS1_k127_4066853_1 protein conserved in bacteria K09912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 299.0
CMS1_k127_4066853_2 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004114 272.0
CMS1_k127_4066853_3 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000005439 228.0
CMS1_k127_4066853_4 hydrolase K10806 - - 0.0000000000000000000000000000000000000000000000000000000000000003841 222.0
CMS1_k127_4066853_5 HD phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000344 206.0
CMS1_k127_4066853_6 Cold shock K03704 - - 0.00000000000000000000000000000000001606 140.0
CMS1_k127_407176_0 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 355.0
CMS1_k127_407176_1 TOBE domain K02019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 347.0
CMS1_k127_407176_2 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106 308.0
CMS1_k127_4087107_0 FAD binding domain K03380 - 1.14.13.7 0.0 1197.0
CMS1_k127_4087107_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 1.786e-269 832.0
CMS1_k127_4087107_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 283.0
CMS1_k127_4087107_3 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 281.0
CMS1_k127_4087107_4 Cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003022 265.0
CMS1_k127_4087107_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000000000000000000000000000000002061 213.0
CMS1_k127_4087107_6 Protein with unknown function (DUF469) - - - 0.0000000000000000000000000000000000000000000000000000004779 194.0
CMS1_k127_4087107_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000009012 175.0
CMS1_k127_4087107_8 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000000000000000000004935 164.0
CMS1_k127_4087107_9 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000002129 70.0
CMS1_k127_40899_0 Peptidase, M50 family K16922 - - 2.352e-224 716.0
CMS1_k127_40899_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 514.0
CMS1_k127_40899_10 COG3547 Transposase and inactivated derivatives K07486 - - 0.0000000000000000000000000013 113.0
CMS1_k127_40899_11 COG3547 Transposase and inactivated derivatives K07486 - - 0.00000000000000008566 81.0
CMS1_k127_40899_12 Transposase domain (DUF772) - - - 0.00000000000000308 79.0
CMS1_k127_40899_13 Product type h extrachromosomal origin - - - 0.000000000002147 69.0
CMS1_k127_40899_14 COG3547 Transposase and inactivated derivatives K07486 - - 0.000000000007473 67.0
CMS1_k127_40899_15 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.0000000001254 70.0
CMS1_k127_40899_16 pathogenesis K15531 - 3.2.1.156 0.0000001155 66.0
CMS1_k127_40899_17 COG3547 Transposase and inactivated derivatives K07486 - - 0.0000008019 51.0
CMS1_k127_40899_18 COG3547 Transposase and inactivated derivatives K07486 - - 0.000006107 49.0
CMS1_k127_40899_19 Transposase (IS116 IS110 IS902 family) K07486 - - 0.0006911 42.0
CMS1_k127_40899_2 GAF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 501.0
CMS1_k127_40899_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 507.0
CMS1_k127_40899_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003517 260.0
CMS1_k127_40899_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000008618 187.0
CMS1_k127_40899_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000002251 168.0
CMS1_k127_40899_7 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000002987 170.0
CMS1_k127_40899_8 Integrase core domain K07482 - - 0.00000000000000000000000000000004243 128.0
CMS1_k127_40899_9 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000003674 121.0
CMS1_k127_4101826_0 diguanylate cyclase - - - 0.0 1206.0
CMS1_k127_4101826_1 AIG2-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 388.0
CMS1_k127_4101826_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 365.0
CMS1_k127_4126811_0 Sodium hydrogen antiporter - - - 1.154e-215 674.0
CMS1_k127_4126811_1 glycosyl transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 579.0
CMS1_k127_4126811_2 Na -driven multidrug efflux pump - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 471.0
CMS1_k127_4126811_3 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 366.0
CMS1_k127_4127466_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1065.0
CMS1_k127_4127466_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 5.016e-298 922.0
CMS1_k127_4127466_10 Protein of unknown function (DUF3087) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 288.0
CMS1_k127_4127466_11 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000000000000000000000000000000003729 199.0
CMS1_k127_4127466_12 arsenate reductase K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000009415 194.0
CMS1_k127_4127466_13 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000000000005357 179.0
CMS1_k127_4127466_14 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000004104 169.0
CMS1_k127_4127466_15 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000000000000000000000007966 152.0
CMS1_k127_4127466_16 - - - - 0.00000000000000000000000000000000377 130.0
CMS1_k127_4127466_2 membrane K07058 - - 6.934e-214 670.0
CMS1_k127_4127466_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 9.241e-207 650.0
CMS1_k127_4127466_4 - - - - 4.21e-196 623.0
CMS1_k127_4127466_5 UBA THIF-type NAD FAD binding K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 479.0
CMS1_k127_4127466_6 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000768 379.0
CMS1_k127_4127466_7 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 345.0
CMS1_k127_4127466_8 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 323.0
CMS1_k127_4127466_9 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 326.0
CMS1_k127_4138570_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1329.0
CMS1_k127_4138570_1 HDOD domain - - - 1.639e-209 658.0
CMS1_k127_4138570_2 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 9.175e-205 639.0
CMS1_k127_4138570_3 Methylenetetrahydrofolate reductase - - - 7.156e-197 616.0
CMS1_k127_4138570_4 protein conserved in bacteria K09986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 310.0
CMS1_k127_4138570_5 protein conserved in bacteria K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002319 258.0
CMS1_k127_4138570_6 Translation initiation factor K03113 - - 0.0000000000000000000000000000000000000000000000000000000000000000008651 228.0
CMS1_k127_4138570_7 gag-polyprotein putative aspartyl protease - - - 0.0000000000000000000000000000000000000000000000000000000000000006628 228.0
CMS1_k127_4138570_8 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 0.000000000000000000000000000000002876 128.0
CMS1_k127_4138570_9 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000001548 97.0
CMS1_k127_416433_0 efflux pump K18138 - - 0.0 1705.0
CMS1_k127_416433_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1184.0
CMS1_k127_416433_10 transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 306.0
CMS1_k127_416433_11 phosphate ion binding K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001259 259.0
CMS1_k127_416433_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000001535 195.0
CMS1_k127_416433_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 7.618e-253 787.0
CMS1_k127_416433_3 Aminotransferase K00812 - 2.6.1.1 9.292e-240 743.0
CMS1_k127_416433_4 COG1538 Outer membrane protein K12340 - - 3.832e-223 702.0
CMS1_k127_416433_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 3.042e-209 654.0
CMS1_k127_416433_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 480.0
CMS1_k127_416433_7 belongs to the bacterial solute-binding protein 3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 407.0
CMS1_k127_416433_8 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 354.0
CMS1_k127_416433_9 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 329.0
CMS1_k127_418340_0 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 2.419e-210 656.0
CMS1_k127_418340_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 315.0
CMS1_k127_418340_2 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 0.000000000000000000000000000002122 120.0
CMS1_k127_4221661_0 Paraquat-inducible protein B - - - 2.466e-317 977.0
CMS1_k127_4221661_1 paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 351.0
CMS1_k127_4230807_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 0.0 1352.0
CMS1_k127_4230807_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 6.931e-271 835.0
CMS1_k127_4230807_2 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 3.246e-266 822.0
CMS1_k127_4230807_3 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent K03184 - - 7.506e-218 681.0
CMS1_k127_4230807_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 597.0
CMS1_k127_4230807_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 331.0
CMS1_k127_4230807_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000002427 242.0
CMS1_k127_4230807_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000007188 99.0
CMS1_k127_4233139_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.289e-203 641.0
CMS1_k127_4233139_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000008883 205.0
CMS1_k127_4233139_2 Universal stress protein family - - - 0.000000000000000000000000000000000000003115 151.0
CMS1_k127_4233139_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000005895 151.0
CMS1_k127_4233139_4 Trap-type c4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000007749 97.0
CMS1_k127_4236301_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 5.48e-196 612.0
CMS1_k127_4236301_1 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 462.0
CMS1_k127_4236301_2 Extradiol ring-cleavage dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 310.0
CMS1_k127_4236301_3 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000002946 171.0
CMS1_k127_4241447_0 Belongs to the peptidase M16 family K06972 - - 0.0 1594.0
CMS1_k127_4241447_1 Methionine synthase K00548 - 2.1.1.13 0.0 1098.0
CMS1_k127_4241447_2 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 522.0
CMS1_k127_4241447_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 488.0
CMS1_k127_4241447_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 372.0
CMS1_k127_4241447_5 Phasin protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004715 231.0
CMS1_k127_4259114_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 2027.0
CMS1_k127_4259114_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1182.0
CMS1_k127_4259114_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 6.931e-249 772.0
CMS1_k127_4259114_3 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 1.397e-231 718.0
CMS1_k127_4259114_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 398.0
CMS1_k127_4259114_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 391.0
CMS1_k127_4259114_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001814 273.0
CMS1_k127_4259114_7 chemotaxis, protein - - - 0.0000000000000000000000000000000000000000000000000000000321 212.0
CMS1_k127_4259114_8 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.000000000000000000000000000000000000000000000000002548 183.0
CMS1_k127_4269131_0 COG4303 Ethanolamine ammonia-lyase, large subunit K03735 - 4.3.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 374.0
CMS1_k127_4269131_1 Belongs to the EutC family K03736 - 4.3.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 299.0
CMS1_k127_4273142_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.66e-263 813.0
CMS1_k127_4273142_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 2.111e-258 799.0
CMS1_k127_4273142_10 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 394.0
CMS1_k127_4273142_11 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 310.0
CMS1_k127_4273142_12 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 283.0
CMS1_k127_4273142_13 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005837 243.0
CMS1_k127_4273142_14 Belongs to the HesB IscA family K05997,K13628 - - 0.0000000000000000000000000000000000000000000000000000000001949 203.0
CMS1_k127_4273142_15 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000000001953 154.0
CMS1_k127_4273142_16 protein conserved in bacteria K09937 - - 0.00000000000000000000000000000149 123.0
CMS1_k127_4273142_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 4.958e-246 761.0
CMS1_k127_4273142_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 1.893e-221 690.0
CMS1_k127_4273142_4 HflC and HflK could encode or regulate a protease K04088 - - 7.237e-204 640.0
CMS1_k127_4273142_5 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.038e-200 628.0
CMS1_k127_4273142_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 536.0
CMS1_k127_4273142_7 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 525.0
CMS1_k127_4273142_8 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 507.0
CMS1_k127_4273142_9 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 407.0
CMS1_k127_4313612_0 Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate K06447 - 1.2.1.71 8.359e-253 786.0
CMS1_k127_4313612_1 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 1.204e-199 631.0
CMS1_k127_4313612_2 arginine N-succinyltransferase K00673 - 2.3.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 444.0
CMS1_k127_4313612_3 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000000000000009777 87.0
CMS1_k127_4354292_0 AMP-binding enzyme - - - 1.684e-204 651.0
CMS1_k127_4354292_1 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000001055 231.0
CMS1_k127_4354292_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000003447 135.0
CMS1_k127_4354292_3 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000001353 91.0
CMS1_k127_435523_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.083e-311 956.0
CMS1_k127_435523_1 Aminotransferase K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 575.0
CMS1_k127_435523_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001502 230.0
CMS1_k127_4375012_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 2.68e-268 827.0
CMS1_k127_4375012_1 Cytochrome c1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 445.0
CMS1_k127_4375012_2 Stringent starvation protein A K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
CMS1_k127_4375012_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 366.0
CMS1_k127_4375012_4 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001795 243.0
CMS1_k127_439733_0 Bacterial regulatory helix-turn-helix protein, lysR family K19338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 495.0
CMS1_k127_439733_1 Class II aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 474.0
CMS1_k127_439733_2 Trap-type c4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 410.0
CMS1_k127_439733_3 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008733 393.0
CMS1_k127_439733_4 Belongs to the UPF0311 family - - - 0.0000000000000000000001447 99.0
CMS1_k127_4412294_0 GGDEF domain - - - 1.407e-297 932.0
CMS1_k127_4412294_1 Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA K11391 - 2.1.1.174 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 554.0
CMS1_k127_4412294_2 threonine efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 325.0
CMS1_k127_441746_0 Thiol oxidoreductase - - - 2.598e-268 830.0
CMS1_k127_441746_1 Imelysin K07231 - - 1.289e-212 666.0
CMS1_k127_441746_2 protein conserved in bacteria K09947 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 554.0
CMS1_k127_441746_3 Peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 462.0
CMS1_k127_441746_4 Imelysin K07338 - - 0.0000000000000000000000000009846 126.0
CMS1_k127_4431670_0 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 6.875e-259 801.0
CMS1_k127_4431670_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 5.127e-224 696.0
CMS1_k127_4431670_2 transcriptional regulator K19337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 287.0
CMS1_k127_4431919_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381 - 1.8.1.2 3.661e-307 947.0
CMS1_k127_4431919_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 1.08e-251 781.0
CMS1_k127_4431919_2 protein conserved in bacteria - - - 0.0000000000000000000000566 101.0
CMS1_k127_4439124_0 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 5.086e-234 731.0
CMS1_k127_4439124_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 6.818e-194 608.0
CMS1_k127_4439124_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 GO:0003674,GO:0003824,GO:0003991,GO:0004042,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0033554,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 450.0
CMS1_k127_4439124_3 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 349.0
CMS1_k127_4439124_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000002814 71.0
CMS1_k127_44444_0 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 432.0
CMS1_k127_44444_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002032 239.0
CMS1_k127_4456987_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1133.0
CMS1_k127_4456987_1 PFAM CBS domain containing protein K06213 - - 0.000000000000000000000000000000000001192 141.0
CMS1_k127_4463202_0 type VI secretion protein K11900 - - 3.295e-312 957.0
CMS1_k127_4463202_1 Gene 25-like lysozyme K11905 - - 0.00000000000000007842 80.0
CMS1_k127_4463202_2 Type VI secretion system, VipA, VC_A0107 or Hcp2 - - - 0.000000001261 58.0
CMS1_k127_4466018_0 - - - - 2.589e-240 744.0
CMS1_k127_4466018_1 Domain of unknown function (DUF4194) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 386.0
CMS1_k127_4466018_2 DNA replication and repair protein RecF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 280.0
CMS1_k127_4477955_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 561.0
CMS1_k127_4477955_1 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 476.0
CMS1_k127_4489049_0 Fatty acid cis/trans isomerase (CTI) - - - 5.25e-297 931.0
CMS1_k127_4489049_1 PFAM Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 1.027e-207 651.0
CMS1_k127_4489049_2 homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 427.0
CMS1_k127_4489049_3 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 422.0
CMS1_k127_4489049_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 322.0
CMS1_k127_4489049_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009532 246.0
CMS1_k127_4489049_6 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000002878 196.0
CMS1_k127_4489049_7 - - - - 0.00000000000000000000000000001498 120.0
CMS1_k127_4489049_8 - - - - 0.00000000000001418 73.0
CMS1_k127_4498119_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 584.0
CMS1_k127_4498119_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 558.0
CMS1_k127_4498119_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 395.0
CMS1_k127_4502339_0 Binding-protein-dependent transport system inner membrane component K02054 - - 2.878e-231 721.0
CMS1_k127_4502339_1 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 516.0
CMS1_k127_4502339_2 NAD(P)-dependent K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 512.0
CMS1_k127_4502339_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 483.0
CMS1_k127_4502339_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 426.0
CMS1_k127_4502339_5 ThiJ PfpI - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 368.0
CMS1_k127_4502339_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 293.0
CMS1_k127_4502339_7 HupE / UreJ protein K03192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 291.0
CMS1_k127_4502339_8 ABC transporter substrate-binding protein K02055 - - 0.000000000000000000000000000000000000000000000103 168.0
CMS1_k127_4502339_9 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000001602 61.0
CMS1_k127_4504177_0 Diguanylate cyclase - - - 0.0 1067.0
CMS1_k127_4504177_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 525.0
CMS1_k127_4504177_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 490.0
CMS1_k127_4504177_3 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001094 276.0
CMS1_k127_4504177_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005118 256.0
CMS1_k127_4504177_5 Uncharacterised protein family (UPF0231) K09910 - - 0.000000000000000000000000000000000000000000000000000000000004017 209.0
CMS1_k127_4504177_6 - - - - 0.000000000000001743 79.0
CMS1_k127_4506170_0 RimK-like ATPgrasp N-terminal domain - - - 4.119e-218 685.0
CMS1_k127_4506170_1 Aminotransferase class-III - - - 8.976e-218 680.0
CMS1_k127_4506170_2 Cytochrome c K18030 - 1.17.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 473.0
CMS1_k127_4506170_3 Domain of unknown function (DUF3883) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 470.0
CMS1_k127_4506170_4 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 462.0
CMS1_k127_4506170_5 Cytochrome C' - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 284.0
CMS1_k127_4506170_6 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000781 273.0
CMS1_k127_4506170_7 haemagglutination activity domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002403 258.0
CMS1_k127_4531027_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.194e-209 653.0
CMS1_k127_4531027_1 cation transport ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 457.0
CMS1_k127_4531027_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 323.0
CMS1_k127_4531027_3 - - - - 0.0000000007718 63.0
CMS1_k127_4534376_0 Specifically methylates the adenine in position 1618 of 23S rRNA K06970 - 2.1.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 458.0
CMS1_k127_4534376_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007353 278.0
CMS1_k127_4550649_0 Product type K16922 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 586.0
CMS1_k127_4550649_1 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 357.0
CMS1_k127_4550649_2 domain protein K00989,K01077,K01406,K02428,K20276,K21430 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56,3.1.3.1,3.4.24.40,3.6.1.66 0.00000000000000000000000000000000000003041 162.0
CMS1_k127_4550649_3 Transcriptional activator HlyU - - - 0.00000000000000000000153 96.0
CMS1_k127_4550649_4 6-phosphogluconolactonase activity - - - 0.000000000006213 78.0
CMS1_k127_4550649_5 - - - - 0.0001892 51.0
CMS1_k127_4552712_0 Tetratricopeptide repeat - - - 1.711e-275 854.0
CMS1_k127_4552712_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.12e-256 790.0
CMS1_k127_4552712_2 Hydroxymethylglutaryl-coenzyme A reductase - - - 1.803e-210 658.0
CMS1_k127_4552712_3 Belongs to the ompA family K21218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 486.0
CMS1_k127_4552712_4 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 425.0
CMS1_k127_4552712_5 tryptophan synthase subunit beta - - - 0.00000000000000000000000000000000000000000199 158.0
CMS1_k127_4552712_6 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.0002356 43.0
CMS1_k127_4563285_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1365.0
CMS1_k127_4563285_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 4.517e-287 889.0
CMS1_k127_4563285_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 5.731e-278 857.0
CMS1_k127_4563285_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 8.369e-245 764.0
CMS1_k127_4563285_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 7.369e-226 701.0
CMS1_k127_4563285_5 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 1.006e-206 646.0
CMS1_k127_4563285_6 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009715 264.0
CMS1_k127_4563285_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000000000000000000000000000000001122 208.0
CMS1_k127_4563285_8 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000001889 81.0
CMS1_k127_456886_0 belongs to the aldehyde dehydrogenase family - - - 1.837e-242 752.0
CMS1_k127_456886_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 2.768e-203 642.0
CMS1_k127_456886_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 422.0
CMS1_k127_456886_3 PFAM flavin reductase domain protein FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 387.0
CMS1_k127_456886_4 TIGRFAM Drug resistance transporter Bcr CflA subfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 382.0
CMS1_k127_456886_5 COG2346 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000001205 153.0
CMS1_k127_456886_6 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000000000758 90.0
CMS1_k127_4583989_0 DNA helicase K03654 - 3.6.4.12 0.0 999.0
CMS1_k127_4583989_1 cAMP phosphodiesterases class-II - - - 0.000000000000000000000000000000000000003382 147.0
CMS1_k127_4583989_2 Protein of unknown function (DUF1289) K06938 - - 0.00000000000002892 75.0
CMS1_k127_4607234_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1123.0
CMS1_k127_4607234_1 PFAM glycosyl transferase family 39 - - - 5.9e-287 887.0
CMS1_k127_4607234_10 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 448.0
CMS1_k127_4607234_11 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 432.0
CMS1_k127_4607234_12 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 367.0
CMS1_k127_4607234_13 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 319.0
CMS1_k127_4607234_14 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 294.0
CMS1_k127_4607234_15 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003776 262.0
CMS1_k127_4607234_16 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000000000000002698 209.0
CMS1_k127_4607234_17 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000002111 162.0
CMS1_k127_4607234_18 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000000000004957 147.0
CMS1_k127_4607234_19 - - - - 0.0000000000000000000006961 96.0
CMS1_k127_4607234_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 4.447e-239 744.0
CMS1_k127_4607234_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 3.776e-220 685.0
CMS1_k127_4607234_4 Belongs to the peptidase S11 family K07258 - 3.4.16.4 4.432e-216 674.0
CMS1_k127_4607234_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 8.677e-203 633.0
CMS1_k127_4607234_6 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 603.0
CMS1_k127_4607234_7 Lytic murein transglycosylase B K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 548.0
CMS1_k127_4607234_8 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 498.0
CMS1_k127_4607234_9 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 479.0
CMS1_k127_4613203_0 Protein of unknown function (DUF1302) - - - 1.488e-271 847.0
CMS1_k127_4613203_1 Protein of unknown function (DUF1329) - - - 7.622e-265 818.0
CMS1_k127_4613203_3 Spermidine synthase - - - 0.0000000000000000605 80.0
CMS1_k127_4613203_4 AraC family transcriptional regulator - - - 0.000408 43.0
CMS1_k127_4617952_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.836e-285 880.0
CMS1_k127_4617952_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15785 GO:0003674,GO:0003824,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0032787,GO:0042399,GO:0042400,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045303,GO:0046395,GO:0046483,GO:0046700,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 2.6.1.76 7.842e-283 871.0
CMS1_k127_4617952_2 DNA helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000002168 135.0
CMS1_k127_4619895_0 Spermidine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 406.0
CMS1_k127_4619895_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000009315 141.0
CMS1_k127_462223_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1787.0
CMS1_k127_462223_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000001759 73.0
CMS1_k127_4622850_0 Succinyl-CoA ligase like flavodoxin domain K09181 - - 0.0 1634.0
CMS1_k127_4622850_1 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 8.846e-296 914.0
CMS1_k127_4622850_2 ATP-NAD kinase - - - 7.015e-208 649.0
CMS1_k127_4622850_3 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 565.0
CMS1_k127_4622850_4 Flagellar protein YcgR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 379.0
CMS1_k127_4622850_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine - - - 0.00000000000000000000000000000000000000000000000000000000000000002152 224.0
CMS1_k127_4622850_6 Transcriptional K22042 - - 0.000000000000000000000000000000000000000000000000000001294 192.0
CMS1_k127_4622850_7 - - - - 0.0000000000000000000000000000000000000000000000322 170.0
CMS1_k127_4622850_8 - - - - 0.00000000000000000000000000000000004043 136.0
CMS1_k127_4622850_9 - - - - 0.0001614 44.0
CMS1_k127_4631905_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 491.0
CMS1_k127_4631905_1 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 390.0
CMS1_k127_4631905_2 PFAM porin Gram-negative type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 391.0
CMS1_k127_4631905_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 353.0
CMS1_k127_4631905_4 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002243 264.0
CMS1_k127_4631905_5 ABC transporter K15555 - - 0.000000000000000000000000000000000000000000000000414 185.0
CMS1_k127_4631905_6 TIGRFAM ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system - - - 0.0006689 46.0
CMS1_k127_4645186_0 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 466.0
CMS1_k127_4645186_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 465.0
CMS1_k127_4645186_2 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 428.0
CMS1_k127_4645186_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 328.0
CMS1_k127_4645186_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 285.0
CMS1_k127_4645186_5 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 286.0
CMS1_k127_4645186_6 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 277.0
CMS1_k127_4645186_7 PFAM lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000005665 199.0
CMS1_k127_4645906_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1297.0
CMS1_k127_4645906_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 8.371e-251 775.0
CMS1_k127_4645906_10 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 304.0
CMS1_k127_4645906_11 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 287.0
CMS1_k127_4645906_12 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000000001528 178.0
CMS1_k127_4645906_13 Dihydroorotase multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000006155 123.0
CMS1_k127_4645906_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.309e-218 681.0
CMS1_k127_4645906_3 catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis K01624 - 4.1.2.13 3.323e-212 661.0
CMS1_k127_4645906_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 1.74e-200 626.0
CMS1_k127_4645906_5 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 4.89e-197 615.0
CMS1_k127_4645906_6 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 2.94e-196 615.0
CMS1_k127_4645906_7 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 473.0
CMS1_k127_4645906_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 400.0
CMS1_k127_4645906_9 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 304.0
CMS1_k127_4654917_0 DNA polymerase K02337 - 2.7.7.7 0.0 1756.0
CMS1_k127_4659110_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1351.0
CMS1_k127_4659110_1 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 596.0
CMS1_k127_4659110_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 529.0
CMS1_k127_4659110_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 347.0
CMS1_k127_4668001_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 576.0
CMS1_k127_4668001_1 Ser threonine protein phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 500.0
CMS1_k127_4668001_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 462.0
CMS1_k127_4668001_3 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002552 273.0
CMS1_k127_4668001_4 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000001697 82.0
CMS1_k127_4674865_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 5.772e-273 843.0
CMS1_k127_4674865_1 Mg2 and Co2 transporter CorB - - - 3.789e-241 750.0
CMS1_k127_4674865_11 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000339 119.0
CMS1_k127_4674865_12 Fe-S protein K06938 - - 0.0000000000000000001326 89.0
CMS1_k127_4674865_13 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000002998 49.0
CMS1_k127_4674865_2 recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 566.0
CMS1_k127_4674865_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 482.0
CMS1_k127_4674865_4 cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007805 418.0
CMS1_k127_4674865_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 325.0
CMS1_k127_4674865_6 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 303.0
CMS1_k127_4674865_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000000000000002501 221.0
CMS1_k127_4674865_8 Thiamine-binding protein - - - 0.0000000000000000000000000000000000000000000000000008708 184.0
CMS1_k127_4674865_9 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000008215 148.0
CMS1_k127_4685295_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1016.0
CMS1_k127_4685295_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.244e-247 772.0
CMS1_k127_4685295_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 585.0
CMS1_k127_4685295_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 542.0
CMS1_k127_4685295_4 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 282.0
CMS1_k127_4685295_5 Cache domain - - - 0.000000000000000000000000000000000000000000000001149 190.0
CMS1_k127_4685295_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000008401 96.0
CMS1_k127_4685295_7 - - - - 0.0000000001631 65.0
CMS1_k127_4696187_0 Major Facilitator Superfamily - - - 5.318e-220 687.0
CMS1_k127_4696187_1 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 623.0
CMS1_k127_4696187_10 membrane - - - 0.0000000000000000000000000000000000001274 142.0
CMS1_k127_4696187_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 562.0
CMS1_k127_4696187_3 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 497.0
CMS1_k127_4696187_4 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 346.0
CMS1_k127_4696187_5 D-isomer specific 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
CMS1_k127_4696187_6 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 322.0
CMS1_k127_4696187_7 Protein of unknown function (DUF1456) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 319.0
CMS1_k127_4696187_8 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 287.0
CMS1_k127_4696579_0 protease K08303 - - 1.271e-289 890.0
CMS1_k127_4696579_1 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 340.0
CMS1_k127_4696579_2 enzyme of heme biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 338.0
CMS1_k127_4696579_3 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 308.0
CMS1_k127_4696579_4 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.000000000000000000000000000000000003927 138.0
CMS1_k127_4723006_0 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates K21636 - 1.1.98.6 0.0 1117.0
CMS1_k127_4723006_1 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.0 1066.0
CMS1_k127_4723006_2 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 409.0
CMS1_k127_4723006_3 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000001705 192.0
CMS1_k127_4723006_4 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000009011 173.0
CMS1_k127_4723006_5 Anaerobic ribonucleoside-triphosphate reductase - - - 0.00000000000000000006836 92.0
CMS1_k127_4726729_0 Belongs to the GcvT family K00302 - 1.5.3.1 7.05e-321 983.0
CMS1_k127_4726729_1 Serine dehydratase beta chain K01752 - 4.3.1.17 1.236e-272 842.0
CMS1_k127_4726729_2 transcriptional regulator K21826 - - 6.612e-194 610.0
CMS1_k127_4726729_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 561.0
CMS1_k127_4726729_4 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 290.0
CMS1_k127_4744891_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 540.0
CMS1_k127_4744891_1 Phasin protein - - - 0.00000000000000000000000000000000000000000003279 164.0
CMS1_k127_4747537_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 556.0
CMS1_k127_4747537_1 Glycosyltransferase family 92 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009855 526.0
CMS1_k127_4747537_2 Nucleotide-diphospho-sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 308.0
CMS1_k127_4747537_3 COG0859 ADP-heptose LPS heptosyltransferase K02841 - - 0.00000000000000000000000000000000000000009687 151.0
CMS1_k127_4747881_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal - - - 6.044e-239 740.0
CMS1_k127_4747881_1 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 507.0
CMS1_k127_4747881_2 GHMP kinases N terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008719 407.0
CMS1_k127_4751637_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1547.0
CMS1_k127_4751637_1 phosphate transporter K03306 - - 1.511e-241 749.0
CMS1_k127_4751637_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 416.0
CMS1_k127_4751637_3 COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 415.0
CMS1_k127_4751637_4 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 403.0
CMS1_k127_4757114_0 of the RND superfamily K07003 - - 0.0 1328.0
CMS1_k127_4757114_1 acyl-CoA dehydrogenase - - - 0.0 1131.0
CMS1_k127_4757114_10 Universal stress protein family K14055 - - 0.00000000000000000000000000000000000000000000000005375 188.0
CMS1_k127_4757114_11 sterol carrier protein - - - 0.000000000000000000000000000000000000000002854 158.0
CMS1_k127_4757114_12 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 0.000000001353 59.0
CMS1_k127_4757114_2 Bacterial regulatory protein, Fis family - - - 5.939e-236 735.0
CMS1_k127_4757114_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 2.197e-221 692.0
CMS1_k127_4757114_4 With LivFGHM is involved in the high affinity leucine transport K01999 - - 1.509e-218 680.0
CMS1_k127_4757114_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 533.0
CMS1_k127_4757114_6 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 491.0
CMS1_k127_4757114_7 involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 492.0
CMS1_k127_4757114_8 Branched-chain amino acid transport K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 391.0
CMS1_k127_4757114_9 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006541 272.0
CMS1_k127_4766571_0 transcriptional regulator K21405 - - 0.0 1187.0
CMS1_k127_4766571_1 ABC transporter transmembrane region - - - 0.0 1026.0
CMS1_k127_4766571_10 Tryptophan halogenase - - - 2.164e-249 774.0
CMS1_k127_4766571_11 His Kinase A (phosphoacceptor) domain - - - 9.051e-233 726.0
CMS1_k127_4766571_12 Quinohemoprotein amine dehydrogenase - - - 1.853e-232 721.0
CMS1_k127_4766571_13 ABC transporter K02000 - 3.6.3.32 6.966e-195 614.0
CMS1_k127_4766571_14 Quinohemoprotein amine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 572.0
CMS1_k127_4766571_15 Glycine betaine K02002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 519.0
CMS1_k127_4766571_16 PFAM binding-protein-dependent transport systems inner membrane component K02001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 489.0
CMS1_k127_4766571_17 COG1292 Choline-glycine betaine transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 469.0
CMS1_k127_4766571_18 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 419.0
CMS1_k127_4766571_19 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 396.0
CMS1_k127_4766571_2 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0 1009.0
CMS1_k127_4766571_20 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 366.0
CMS1_k127_4766571_21 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 361.0
CMS1_k127_4766571_22 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 351.0
CMS1_k127_4766571_23 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 344.0
CMS1_k127_4766571_24 Repressor involved in choline regulation of the bet genes K02167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 305.0
CMS1_k127_4766571_25 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001816 266.0
CMS1_k127_4766571_26 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000005452 235.0
CMS1_k127_4766571_27 protein conserved in bacteria K09935 - - 0.00000000000000000000000000000000000000000000000000000000000000000003432 235.0
CMS1_k127_4766571_28 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000004702 231.0
CMS1_k127_4766571_29 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000000000000000000000208 219.0
CMS1_k127_4766571_3 Quinohemoprotein amine dehydrogenase - - - 2.639e-314 963.0
CMS1_k127_4766571_30 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000000000000002218 187.0
CMS1_k127_4766571_31 - - - - 0.0000000000000000000000000000000000000000000000001457 187.0
CMS1_k127_4766571_32 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000001327 153.0
CMS1_k127_4766571_4 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 3.646e-312 958.0
CMS1_k127_4766571_5 Radical SAM superfamily - - - 1.25e-311 955.0
CMS1_k127_4766571_6 Quinohemoprotein amine dehydrogenase, alpha subunit domain II - - - 1.083e-308 950.0
CMS1_k127_4766571_7 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid K00130 - 1.2.1.8 5.392e-290 893.0
CMS1_k127_4766571_8 Quinohemoprotein amine dehydrogenase, alpha subunit domain II - - - 4.676e-263 818.0
CMS1_k127_4766571_9 Alginate export - - - 1.789e-258 800.0
CMS1_k127_4767991_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.253e-260 805.0
CMS1_k127_4767991_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 1.762e-202 635.0
CMS1_k127_4767991_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 308.0
CMS1_k127_4767991_3 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000003015 224.0
CMS1_k127_4767991_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000005302 159.0
CMS1_k127_4768804_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01473,K10855 - 3.5.2.14,6.4.1.6 0.0 1174.0
CMS1_k127_4768804_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0 1049.0
CMS1_k127_4768804_2 Sigma-54 interaction domain K21405 - - 7.897e-289 902.0
CMS1_k127_4768804_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.515e-249 775.0
CMS1_k127_4768804_4 Transcriptional regulator, TrmB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002016 273.0
CMS1_k127_4778412_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 473.0
CMS1_k127_4778412_1 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 324.0
CMS1_k127_4778412_2 Belongs to the UPF0325 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006288 233.0
CMS1_k127_4778412_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000002639 180.0
CMS1_k127_4778412_4 ADP-ribose pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000001723 177.0
CMS1_k127_4778412_5 Proteolipid membrane potential modulator - - - 0.00000000000000006554 81.0
CMS1_k127_4778412_6 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000001179 70.0
CMS1_k127_4786227_0 MATE efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 561.0
CMS1_k127_4786227_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 394.0
CMS1_k127_4786227_2 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 321.0
CMS1_k127_4812227_0 Signal transduction histidine kinase K10125 - 2.7.13.3 0.0 1225.0
CMS1_k127_4812227_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 3.108e-281 870.0
CMS1_k127_4812227_2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 2.717e-259 803.0
CMS1_k127_4812227_3 TIGRFAM TRAP dicarboxylate transporter, DctP subunit K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 569.0
CMS1_k127_4812227_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 499.0
CMS1_k127_4812227_5 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component K11689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 301.0
CMS1_k127_4821875_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1234.0
CMS1_k127_4821875_1 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 4.241e-217 688.0
CMS1_k127_4821875_10 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 291.0
CMS1_k127_4821875_11 Nucleoside 2-deoxyribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001583 278.0
CMS1_k127_4821875_12 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003096 274.0
CMS1_k127_4821875_13 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000678 215.0
CMS1_k127_4821875_14 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000000005904 163.0
CMS1_k127_4821875_16 fumarate reductase, iron-sulfur protein K00245 - 1.3.5.4 0.000000000000000000000000000000694 122.0
CMS1_k127_4821875_2 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 604.0
CMS1_k127_4821875_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 589.0
CMS1_k127_4821875_4 AFG1-like ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 554.0
CMS1_k127_4821875_5 C4-dicarboxylate ABC transporter substrate-binding protein K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 486.0
CMS1_k127_4821875_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 406.0
CMS1_k127_4821875_7 phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 392.0
CMS1_k127_4821875_8 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 376.0
CMS1_k127_4821875_9 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 340.0
CMS1_k127_4823139_0 Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) K00209 - 1.3.1.44,1.3.1.9 5.744e-242 749.0
CMS1_k127_4823139_1 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 505.0
CMS1_k127_4823139_2 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 415.0
CMS1_k127_4823139_3 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 0.000000000000000000000000000004205 119.0
CMS1_k127_4832050_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1073.0
CMS1_k127_4832050_1 phosphoserine phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 370.0
CMS1_k127_4832050_2 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 345.0
CMS1_k127_4840221_0 auxin efflux carrier K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 467.0
CMS1_k127_4840221_1 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008898 274.0
CMS1_k127_4840221_2 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 0.000000000000000000000000000000000000000000000000000000000000008358 217.0
CMS1_k127_4840221_3 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000003177 183.0
CMS1_k127_484449_0 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 368.0
CMS1_k127_484449_1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 360.0
CMS1_k127_484449_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 299.0
CMS1_k127_484449_3 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000007778 230.0
CMS1_k127_4847049_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1454.0
CMS1_k127_4847049_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 475.0
CMS1_k127_4847049_2 S4 RNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 369.0
CMS1_k127_4847049_3 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001307 269.0
CMS1_k127_4847049_4 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000002749 184.0
CMS1_k127_4847049_5 Sugar (and other) transporter - - - 0.00000001617 55.0
CMS1_k127_4848707_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K05549 - 1.14.12.10 2.636e-251 779.0
CMS1_k127_4848707_1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K05784,K14581,K16161 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.25,1.18.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 466.0
CMS1_k127_4848707_2 Fumarylacetoacetate (FAA) hydrolase family K02509 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 345.0
CMS1_k127_4848707_3 Ring hydroxylating beta subunit K05550 - 1.14.12.10 0.0000000000000000000000000000000000000000000000000000000000000000000000004196 249.0
CMS1_k127_4848707_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K05783 - 1.3.1.25 0.000000000000000000000000000000000000000000000000000001146 196.0
CMS1_k127_4849516_0 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 4.313e-221 692.0
CMS1_k127_4849516_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 582.0
CMS1_k127_4849516_2 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 533.0
CMS1_k127_4849516_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 469.0
CMS1_k127_4849516_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 354.0
CMS1_k127_4849516_5 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000000000000000000000000003367 227.0
CMS1_k127_4849516_6 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide K02439 - 2.8.1.1 0.00000000000000000000000000000000000000000000000000000001077 198.0
CMS1_k127_4849516_7 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000001971 144.0
CMS1_k127_4851488_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 546.0
CMS1_k127_4851488_1 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 471.0
CMS1_k127_4851488_2 COG1061 DNA or RNA helicases of superfamily II K19789 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051301,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.00000000000000002864 83.0
CMS1_k127_485357_0 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 604.0
CMS1_k127_485357_1 - - - - 0.0000000000000000000000000000007775 127.0
CMS1_k127_485357_2 - - - - 0.00008419 48.0
CMS1_k127_4859530_0 Dienelactone hydrolase family K01061 - 3.1.1.45 2.901e-227 709.0
CMS1_k127_4859530_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K14481 - 1.14.14.11 6.398e-220 689.0
CMS1_k127_4859530_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 409.0
CMS1_k127_4859530_3 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 384.0
CMS1_k127_4859530_4 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000004354 193.0
CMS1_k127_4859530_5 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000001294 134.0
CMS1_k127_4859530_6 Catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate K07589 - 5.1.99.7 0.000000000000000000001524 93.0
CMS1_k127_4863487_0 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 4.015e-290 902.0
CMS1_k127_4863487_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 566.0
CMS1_k127_4863487_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 471.0
CMS1_k127_4863487_3 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 391.0
CMS1_k127_4863487_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000944 234.0
CMS1_k127_4863487_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000000907 148.0
CMS1_k127_4863487_6 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.0000000000000000000000006678 104.0
CMS1_k127_4891619_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 2.834e-257 795.0
CMS1_k127_4891619_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.014e-244 762.0
CMS1_k127_4891619_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 459.0
CMS1_k127_4891619_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 456.0
CMS1_k127_4891619_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 407.0
CMS1_k127_4891619_7 - - - - 0.0002035 46.0
CMS1_k127_4895632_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.334e-301 925.0
CMS1_k127_4895632_1 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000002871 102.0
CMS1_k127_4915378_0 molybdopterin K03750 - 2.10.1.1 4.745e-207 650.0
CMS1_k127_4915378_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 437.0
CMS1_k127_4915378_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 322.0
CMS1_k127_4915378_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 295.0
CMS1_k127_4915378_4 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000007732 243.0
CMS1_k127_4915378_5 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000007104 123.0
CMS1_k127_4915378_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000004089 80.0
CMS1_k127_4915378_7 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0000000000001414 73.0
CMS1_k127_4916638_0 Integral membrane sensor signal transduction histidine kinase K08475,K10125 - 2.7.13.3 1.483e-293 912.0
CMS1_k127_4916638_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 534.0
CMS1_k127_4916638_2 Bacterial regulatory protein, Fis family K10126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 386.0
CMS1_k127_4921591_0 Sulfate permease and related transporters (MFS superfamily) K03321 - - 2.002e-282 874.0
CMS1_k127_4921591_1 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 439.0
CMS1_k127_4921591_2 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000000000000000000000000002696 130.0
CMS1_k127_4941410_0 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 359.0
CMS1_k127_4941410_1 COG0471 Di- and tricarboxylate transporters - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 325.0
CMS1_k127_49515_0 FAD-linked oxidase - - - 0.0 1832.0
CMS1_k127_49515_1 Sugar (and other) transporter - - - 0.0 1157.0
CMS1_k127_49515_10 hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 388.0
CMS1_k127_49515_11 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 387.0
CMS1_k127_49515_12 COG4221 Short-chain alcohol dehydrogenase of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 373.0
CMS1_k127_49515_13 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 369.0
CMS1_k127_49515_14 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 339.0
CMS1_k127_49515_15 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 340.0
CMS1_k127_49515_16 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 300.0
CMS1_k127_49515_17 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000009347 232.0
CMS1_k127_49515_18 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000138 227.0
CMS1_k127_49515_19 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006436 226.0
CMS1_k127_49515_2 Aldehyde dehydrogenase family - - - 2.978e-273 849.0
CMS1_k127_49515_20 phenylacetic acid degradation protein K02614 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.00000000000000000000000000000000000000000000000000000000000000002679 226.0
CMS1_k127_49515_21 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000001412 212.0
CMS1_k127_49515_22 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000001641 192.0
CMS1_k127_49515_23 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001229 185.0
CMS1_k127_49515_24 - - - - 0.000000000000000000000000000001403 122.0
CMS1_k127_49515_25 Sodium:sulfate symporter transmembrane region - - - 0.00000000000000000000005067 98.0
CMS1_k127_49515_26 Metal-dependent hydrolase K07043 - - 0.000000000000003944 76.0
CMS1_k127_49515_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 GO:0003674,GO:0003824,GO:0003857,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0008691,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 1.1.1.157 3.756e-232 727.0
CMS1_k127_49515_4 peptidase K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 574.0
CMS1_k127_49515_5 LysR substrate binding domain K17737 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 513.0
CMS1_k127_49515_6 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 482.0
CMS1_k127_49515_7 COG1024 Enoyl-CoA hydratase carnithine racemase K15866 GO:0003674,GO:0003824,GO:0004300,GO:0005488,GO:0005515,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 438.0
CMS1_k127_49515_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 418.0
CMS1_k127_49515_9 Belongs to the enoyl-CoA hydratase isomerase family K01692,K16880 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 401.0
CMS1_k127_4966214_0 Diguanylate cyclase K21021 - 2.7.7.65 1.832e-221 693.0
CMS1_k127_4966214_1 diguanylate cyclase - - - 6.004e-213 667.0
CMS1_k127_4966214_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 383.0
CMS1_k127_4966214_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 385.0
CMS1_k127_4966214_4 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 293.0
CMS1_k127_4980698_0 Oxaloacetate decarboxylase K01571 - 4.1.1.3 0.0 1112.0
CMS1_k127_4980698_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 3.52e-272 841.0
CMS1_k127_4980698_2 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 484.0
CMS1_k127_4980698_3 Lyase and sodium transporter K01573 - 4.1.1.3 0.00000000000000000000000000003358 117.0
CMS1_k127_5025013_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.0 1286.0
CMS1_k127_5025013_1 Na+/Pi-cotransporter K03324 - - 2.217e-293 909.0
CMS1_k127_5025013_10 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 303.0
CMS1_k127_5025013_11 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003235 250.0
CMS1_k127_5025013_12 Competence protein - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000006783 232.0
CMS1_k127_5025013_13 EF hand - - - 0.0000000000000000000000000000000000002109 148.0
CMS1_k127_5025013_14 - - - - 0.000000000000000000000000000000000002095 138.0
CMS1_k127_5025013_15 - - - - 0.00000000000000003855 91.0
CMS1_k127_5025013_16 response regulator K02483 - - 0.00000000001935 68.0
CMS1_k127_5025013_17 Uncharacterised protein family UPF0066 - - - 0.00000000002032 64.0
CMS1_k127_5025013_2 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 2.898e-261 809.0
CMS1_k127_5025013_3 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 1.804e-227 707.0
CMS1_k127_5025013_4 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 2.905e-213 664.0
CMS1_k127_5025013_5 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 6.681e-203 634.0
CMS1_k127_5025013_6 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 440.0
CMS1_k127_5025013_7 SprA-related family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 385.0
CMS1_k127_5025013_8 Alpha beta hydrolase K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 344.0
CMS1_k127_5025013_9 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 316.0
CMS1_k127_5025841_0 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 1.454e-241 763.0
CMS1_k127_5025841_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 7.831e-232 724.0
CMS1_k127_5025841_10 - K02651 - - 0.000000001022 61.0
CMS1_k127_5025841_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 413.0
CMS1_k127_5025841_3 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 394.0
CMS1_k127_5025841_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 365.0
CMS1_k127_5025841_5 Glutathione S-transferase, C-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 362.0
CMS1_k127_5025841_6 Molybdenum cofactor sulfurase K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 355.0
CMS1_k127_5025841_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 338.0
CMS1_k127_5025841_8 regulator - - - 0.0000000000000000000000000000000000000000000000000000008031 202.0
CMS1_k127_5025841_9 Glycerophosphoryl diester phosphodiesterase family - - - 0.00000000000000000000000000000000000002142 154.0
CMS1_k127_5046156_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 2.769e-205 639.0
CMS1_k127_5046156_1 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 541.0
CMS1_k127_5046156_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 501.0
CMS1_k127_5046156_3 protein required for cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 426.0
CMS1_k127_5046156_4 Yip1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 366.0
CMS1_k127_5046156_5 SURF1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 291.0
CMS1_k127_5046156_6 oxidase assembly K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003095 274.0
CMS1_k127_5046156_7 signal sequence binding - - - 0.000000000000000000000000000000000000000000000000000000000002402 213.0
CMS1_k127_5055758_0 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 5.619e-290 891.0
CMS1_k127_5055758_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 456.0
CMS1_k127_5056057_0 Protein of unknown function (DUF3726) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 439.0
CMS1_k127_5056057_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 416.0
CMS1_k127_5056057_2 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001815 280.0
CMS1_k127_5056057_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000005272 236.0
CMS1_k127_5086799_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.88e-274 847.0
CMS1_k127_5086799_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 1.247e-200 628.0
CMS1_k127_5086799_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 576.0
CMS1_k127_5095287_0 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 4.472e-263 816.0
CMS1_k127_5095287_1 NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 491.0
CMS1_k127_5095287_2 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001178 250.0
CMS1_k127_5095287_3 accelerates isomerization of the peptidyl prolyl bond K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000002648 179.0
CMS1_k127_5095287_4 - - - - 0.000000000000000000000000004188 111.0
CMS1_k127_5104109_0 O-acetylhomoserine K01740 - 2.5.1.49 7.782e-259 800.0
CMS1_k127_5104109_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 7.611e-219 681.0
CMS1_k127_5114481_0 transcriptional regulator K21699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 554.0
CMS1_k127_5114481_1 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 300.0
CMS1_k127_5117175_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 349.0
CMS1_k127_5117175_1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 344.0
CMS1_k127_5117175_2 Protein of unknown function (DUF1249) K09920 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 287.0
CMS1_k127_5119833_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 2.067e-222 703.0
CMS1_k127_5119833_1 COG1404 Subtilisin-like serine proteases K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 529.0
CMS1_k127_5119833_2 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 434.0
CMS1_k127_5119833_3 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000002728 203.0
CMS1_k127_5119833_4 protein transport across the cell outer membrane K02246,K02457,K02459,K02672,K08084 - - 0.000000001171 66.0
CMS1_k127_5119833_5 Circularly permuted ATP-grasp type 2 - - - 0.0000008514 52.0
CMS1_k127_5125665_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 3.769e-241 747.0
CMS1_k127_5125665_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 500.0
CMS1_k127_5125665_2 transcriptional regulator - - - 0.0000000000000000000000007918 104.0
CMS1_k127_5129859_0 NADH flavin oxidoreductase NADH oxidase K21833 - - 0.0 1378.0
CMS1_k127_5129859_1 Domain of unknown function (DUF3483) K21834 - - 0.0 1215.0
CMS1_k127_5129859_10 - - - - 0.000000000000000000000000000000000000000000000009614 181.0
CMS1_k127_5129859_11 - - - - 0.00000000000000000001689 93.0
CMS1_k127_5129859_12 Transposase IS116/IS110/IS902 family K07486 - - 0.00002795 50.0
CMS1_k127_5129859_2 diguanylate cyclase - - - 0.0 1213.0
CMS1_k127_5129859_3 Belongs to the BCCT transporter (TC 2.A.15) family K03451 - - 1.792e-304 938.0
CMS1_k127_5129859_4 Electron transfer flavoprotein, alpha subunit K03522 - - 3.632e-217 679.0
CMS1_k127_5129859_5 Peptidase M19 K01273 - 3.4.13.19 5.764e-208 647.0
CMS1_k127_5129859_6 Pyrroline-5-carboxylate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 373.0
CMS1_k127_5129859_7 V4R - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 364.0
CMS1_k127_5129859_8 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 349.0
CMS1_k127_5129859_9 Rieske 2Fe-2S K00479 - - 0.0000000000000000000000000000000000000000000000000006712 183.0
CMS1_k127_5165709_0 Signal transduction histidine kinase - - - 0.0 1122.0
CMS1_k127_5165709_1 LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 550.0
CMS1_k127_5165709_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000131 127.0
CMS1_k127_5179984_0 protein involved in response to NO K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 605.0
CMS1_k127_5179984_1 alcohol dehydrogenase K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 593.0
CMS1_k127_5179984_2 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 455.0
CMS1_k127_5179984_3 metal-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 434.0
CMS1_k127_5179984_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 380.0
CMS1_k127_5179984_5 protein conserved in bacteria K09908 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 260.0
CMS1_k127_5179984_6 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000002258 145.0
CMS1_k127_5179984_7 Protein of unknown function (DUF2778) - - - 0.0000000000000000000000000007558 116.0
CMS1_k127_5179984_8 - - - - 0.0000000000000000005712 86.0
CMS1_k127_5184359_0 Putative diguanylate phosphodiesterase - - - 5.65e-203 649.0
CMS1_k127_5184359_1 outer membrane autotransporter barrel domain K12678 - - 0.0005579 50.0
CMS1_k127_5184425_0 C4-dicarboxylate transport system - - - 1.165e-246 765.0
CMS1_k127_5184425_1 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 571.0
CMS1_k127_5184425_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 293.0
CMS1_k127_5184425_3 Dehydrogenase K15371 - 1.4.1.2 0.000000000000000000000000000001967 123.0
CMS1_k127_5189280_0 Belongs to the beta-ketoacyl-ACP synthases family K18473 - 2.3.1.180 0.0 1093.0
CMS1_k127_5189280_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 424.0
CMS1_k127_5189280_2 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 370.0
CMS1_k127_5189280_3 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 360.0
CMS1_k127_5189280_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001775 248.0
CMS1_k127_5189280_5 - - - - 0.000000000000000000000000000000000000003688 151.0
CMS1_k127_5189280_6 Multicopper oxidase K06324 - 1.16.3.3 0.000000000000000000002405 101.0
CMS1_k127_5189280_7 Flagellar assembly protein T, middle domain - - - 0.000000000000001885 76.0
CMS1_k127_5196331_0 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 7.674e-219 681.0
CMS1_k127_5196331_1 effector of murein hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 419.0
CMS1_k127_5196331_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 295.0
CMS1_k127_5196331_3 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003771 241.0
CMS1_k127_5196331_4 LrgA family - - - 0.000000000000000000000000000000000000000000000000002529 184.0
CMS1_k127_5196331_5 membrane - - - 0.00000000000000000000000000000000000000000000000006558 185.0
CMS1_k127_5196331_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000009891 98.0
CMS1_k127_5216548_0 COG1228 Imidazolonepropionase and related amidohydrolases K01468 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.2.7 1.429e-194 613.0
CMS1_k127_5216548_1 histidine utilization repressor K05836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 356.0
CMS1_k127_5216548_2 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000005833 158.0
CMS1_k127_5216548_3 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479,K01480 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016813,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.3.11,3.5.3.8 0.0003987 44.0
CMS1_k127_5223240_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1067.0
CMS1_k127_5223240_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.42e-309 963.0
CMS1_k127_5223240_2 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 8.529e-219 682.0
CMS1_k127_5223240_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 363.0
CMS1_k127_5223240_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 355.0
CMS1_k127_5223240_5 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 281.0
CMS1_k127_5223240_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000000007468 191.0
CMS1_k127_5223240_7 YcgL domain-containing protein K09902 - - 0.00000000000000000000000000000000000000002439 154.0
CMS1_k127_5310043_0 Hydantoinase B/oxoprolinase K01474,K10854 - 3.5.2.14,6.4.1.6 0.0 1152.0
CMS1_k127_5310043_1 Acetone carboxylase gamma subunit K10856 - 6.4.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 298.0
CMS1_k127_5310043_2 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 - 0.00000000000000000000000000000000000000000000007296 174.0
CMS1_k127_5334635_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 8.104e-287 888.0
CMS1_k127_5334635_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 565.0
CMS1_k127_5334635_2 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 486.0
CMS1_k127_5334635_3 nitroreductase K10678 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 430.0
CMS1_k127_5334635_4 COG0517 FOG CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003355 250.0
CMS1_k127_5334635_5 DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000000000002679 220.0
CMS1_k127_5334635_6 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000001501 171.0
CMS1_k127_5334635_7 - - - - 0.0000000000182 64.0
CMS1_k127_535055_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 589.0
CMS1_k127_535055_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 385.0
CMS1_k127_535055_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 320.0
CMS1_k127_535055_3 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000003577 107.0
CMS1_k127_535055_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000001759 73.0
CMS1_k127_5369583_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 7.853e-206 643.0
CMS1_k127_5369583_1 catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 317.0
CMS1_k127_5369583_2 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 310.0
CMS1_k127_5369583_3 Phosphopantetheine attachment site - - - 0.0000000000000003253 81.0
CMS1_k127_5393708_0 MacB-like periplasmic core domain K02004 - - 1.272e-309 955.0
CMS1_k127_5393708_1 TonB dependent receptor K02014,K16089 - - 1.127e-267 839.0
CMS1_k127_5393708_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides - - - 8.698e-218 678.0
CMS1_k127_5393708_3 Oxidoreductase FAD-binding domain - - - 2.824e-196 615.0
CMS1_k127_5393708_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 519.0
CMS1_k127_5393708_5 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 394.0
CMS1_k127_5393708_6 Domain of unknown function (DUF4154) - - - 0.00001194 55.0
CMS1_k127_5398586_0 Putative serine dehydratase domain K18425,K19967 - 4.1.2.42,4.1.3.41 2.31e-230 715.0
CMS1_k127_5398586_1 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 576.0
CMS1_k127_5398586_2 Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate K01003 GO:0003674,GO:0003824,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008807,GO:0009058,GO:0009987,GO:0015980,GO:0016740,GO:0016772,GO:0016780,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249,GO:0055114 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 321.0
CMS1_k127_5400774_0 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 539.0
CMS1_k127_5400774_1 protein conserved in bacteria K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 512.0
CMS1_k127_5400774_2 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 290.0
CMS1_k127_5409072_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 583.0
CMS1_k127_5409072_1 transcriptional regulator K21711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 497.0
CMS1_k127_5409072_2 Biotin carboxylase K01959 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 494.0
CMS1_k127_5414575_0 Belongs to the GcvT family K00302 - 1.5.3.1 0.0 1143.0
CMS1_k127_5414575_1 FMN-dependent dehydrogenase K00265,K22083 - 1.4.1.13,1.4.1.14,2.1.1.21 2.607e-274 847.0
CMS1_k127_5414575_2 Sarcosine oxidase, subunit beta K00303 - 1.5.3.1 1.739e-248 769.0
CMS1_k127_5414575_3 Glutamine synthetase, catalytic domain K01915,K09470 - 6.3.1.11,6.3.1.2 3.231e-248 771.0
CMS1_k127_5414575_4 glutamine amidotransferase K22081 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 488.0
CMS1_k127_5414575_5 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 432.0
CMS1_k127_5414575_6 Glutamate synthase K22082 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 415.0
CMS1_k127_5414575_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 392.0
CMS1_k127_5414575_8 Sarcosine oxidase, delta subunit K00304 - 1.5.3.1 0.00000000000000000000000000000000000000000004706 163.0
CMS1_k127_5416969_0 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis K01923 - 6.3.2.6 1.205e-235 730.0
CMS1_k127_5416969_1 Sugar (and other) transporter - - - 1.939e-233 730.0
CMS1_k127_5416969_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 338.0
CMS1_k127_5416969_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000002622 242.0
CMS1_k127_5416969_4 LITAF-like zinc ribbon domain containing protein - - - 0.00000000000000000000000000305 111.0
CMS1_k127_5430954_0 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 409.0
CMS1_k127_5430954_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001304 273.0
CMS1_k127_5430954_2 Nitrilase K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000004037 191.0
CMS1_k127_5430954_3 Belongs to the DEAD box helicase family K05590 - 3.6.4.13 0.00007463 45.0
CMS1_k127_5432382_0 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B K13482 - 1.17.1.4 0.0 1401.0
CMS1_k127_5432382_1 COG0402 Cytosine deaminase and related metal-dependent hydrolases K01487 - 3.5.4.3 9.114e-244 757.0
CMS1_k127_5432382_2 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 543.0
CMS1_k127_5432382_3 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 439.0
CMS1_k127_5432382_4 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 372.0
CMS1_k127_5440549_0 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.0 1170.0
CMS1_k127_5440549_1 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 9.769e-293 900.0
CMS1_k127_5440549_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 4.211e-239 740.0
CMS1_k127_5440549_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 565.0
CMS1_k127_5440549_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 556.0
CMS1_k127_5440549_5 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 276.0
CMS1_k127_5440549_6 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001894 204.0
CMS1_k127_5440549_7 activator HlyU - - - 0.00000000000000000000000000000000000000000001029 163.0
CMS1_k127_5441908_0 ATPase, AAA K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 582.0
CMS1_k127_5441908_1 Domain of unknown function (DUF4350) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 485.0
CMS1_k127_5441908_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 396.0
CMS1_k127_5441908_3 - - - - 0.0000000000000000000000000000000000000000000000000003538 186.0
CMS1_k127_5443212_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 475.0
CMS1_k127_5443212_1 Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 448.0
CMS1_k127_5443212_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 408.0
CMS1_k127_5446343_0 Chemotaxis protein histidine kinase and related - - - 1.701e-319 1011.0
CMS1_k127_5446343_1 Histidine kinase K07636 - 2.7.13.3 6.203e-231 721.0
CMS1_k127_5446343_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 509.0
CMS1_k127_5446343_3 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 438.0
CMS1_k127_5446343_4 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 344.0
CMS1_k127_5446343_5 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.0000000000000000000000000000000000000000000000000005105 194.0
CMS1_k127_544795_0 nucleoid-associated protein K06899 - - 2.97e-196 616.0
CMS1_k127_544795_1 CobW/HypB/UreG, nucleotide-binding domain K04652 GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0010467,GO:0016151,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 447.0
CMS1_k127_544795_2 oxygen carrier activity K07216 - - 0.000000000000000000000000000000000000000000000000003505 185.0
CMS1_k127_544795_3 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009898,GO:0010467,GO:0016020,GO:0016151,GO:0019538,GO:0019897,GO:0019898,GO:0031234,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:1901564 - 0.00000000000000000000000000000000000000000000001236 172.0
CMS1_k127_544795_4 - - - - 0.0000000000000000000000000000000000000000006161 160.0
CMS1_k127_544795_5 - - - - 0.000000000000000000000000000000000000009116 147.0
CMS1_k127_544795_6 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000000000000001352 139.0
CMS1_k127_544795_7 YaeQ - - - 0.0000000000000004295 78.0
CMS1_k127_5449732_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1433.0
CMS1_k127_5449732_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1260.0
CMS1_k127_5449732_10 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001084 278.0
CMS1_k127_5449732_11 Transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005241 237.0
CMS1_k127_5449732_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000000001987 215.0
CMS1_k127_5449732_13 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000133 157.0
CMS1_k127_5449732_14 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000003271 111.0
CMS1_k127_5449732_15 hydrolase K01048 - 3.1.1.5 0.00001595 48.0
CMS1_k127_5449732_16 viral genome integration into host DNA - - - 0.00006319 49.0
CMS1_k127_5449732_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1064.0
CMS1_k127_5449732_3 Domain of unknown function (DUF3390) K18929 - - 1.488e-302 930.0
CMS1_k127_5449732_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 5.746e-207 644.0
CMS1_k127_5449732_5 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 520.0
CMS1_k127_5449732_6 Cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 441.0
CMS1_k127_5449732_7 LUD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 377.0
CMS1_k127_5449732_8 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 380.0
CMS1_k127_5449732_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001006 280.0
CMS1_k127_5452782_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.062e-292 900.0
CMS1_k127_5452782_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 477.0
CMS1_k127_5452782_2 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 394.0
CMS1_k127_5452782_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000006627 71.0
CMS1_k127_5459010_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.978e-306 940.0
CMS1_k127_5459010_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 2.331e-216 674.0
CMS1_k127_5459010_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 280.0
CMS1_k127_5459010_2 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 516.0
CMS1_k127_5459010_3 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 508.0
CMS1_k127_5459010_4 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 490.0
CMS1_k127_5459010_5 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 454.0
CMS1_k127_5459010_6 Sodium proton antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 402.0
CMS1_k127_5459010_7 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 391.0
CMS1_k127_5459010_8 Elongation factor P K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 351.0
CMS1_k127_5482401_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 3.011e-260 806.0
CMS1_k127_5482401_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 6.72e-248 767.0
CMS1_k127_5488913_0 Histidine kinase K07673 - 2.7.13.3 3.15e-310 959.0
CMS1_k127_5488913_1 Nitrate nitrite transporter K02575 - - 9.109e-300 924.0
CMS1_k127_5488913_2 nitrate nitrite transporter K02575 - - 4.507e-266 822.0
CMS1_k127_5488913_3 Major Facilitator Superfamily K02575 - - 6.611e-256 791.0
CMS1_k127_5488913_4 response regulator K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 387.0
CMS1_k127_5491545_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 2.107e-271 848.0
CMS1_k127_5491545_1 Tripartite tricarboxylate transporter TctA family K07793 - - 3.986e-229 713.0
CMS1_k127_5491545_10 4-hydroxyphenylpyruvate dioxygenase - - - 0.0000000000000000000000000000000000000000006458 167.0
CMS1_k127_5491545_11 Xylose isomerase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000001239 161.0
CMS1_k127_5491545_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 544.0
CMS1_k127_5491545_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 539.0
CMS1_k127_5491545_4 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 436.0
CMS1_k127_5491545_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 399.0
CMS1_k127_5491545_6 Transcriptional K15735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007341 266.0
CMS1_k127_5491545_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000002527 239.0
CMS1_k127_5491545_8 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000009864 216.0
CMS1_k127_5491545_9 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000000000000000000000006677 199.0
CMS1_k127_5511929_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1346.0
CMS1_k127_5511929_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 326.0
CMS1_k127_5511929_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000003532 137.0
CMS1_k127_5511929_3 membrane K02451,K03832 - - 0.0000000000000000301 90.0
CMS1_k127_5526711_0 Belongs to the GPI family K01810 - 5.3.1.9 5.697e-317 974.0
CMS1_k127_5526711_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 2.612e-278 860.0
CMS1_k127_5526711_2 protein involved in exopolysaccharide biosynthesis K16554 - - 3.277e-249 782.0
CMS1_k127_5526711_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 5.096e-220 689.0
CMS1_k127_5526711_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 502.0
CMS1_k127_5526711_5 capsular polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009884 333.0
CMS1_k127_5526711_6 - - - - 0.0000000000000000000000000000000000000000000000000000000009211 203.0
CMS1_k127_5526711_7 - - - - 0.000000000000000000000000000000000001374 147.0
CMS1_k127_553498_0 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 551.0
CMS1_k127_553498_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 536.0
CMS1_k127_553498_10 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000000001122 190.0
CMS1_k127_553498_11 Uncharacterized conserved protein (DUF2164) - - - 0.00000000000000000000000000000001275 128.0
CMS1_k127_553498_12 - - - - 0.000000000000000000000000031 111.0
CMS1_k127_553498_2 membrane protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 371.0
CMS1_k127_553498_3 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 300.0
CMS1_k127_553498_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 289.0
CMS1_k127_553498_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001371 282.0
CMS1_k127_553498_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001333 242.0
CMS1_k127_553498_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003801 228.0
CMS1_k127_553498_8 AIG2-like family - - - 0.000000000000000000000000000000000000000000000000000000000000001366 222.0
CMS1_k127_553498_9 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000005245 195.0
CMS1_k127_5544573_0 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1155.0
CMS1_k127_5544573_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 9.122e-248 771.0
CMS1_k127_5544573_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 5.217e-199 623.0
CMS1_k127_5544573_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 400.0
CMS1_k127_5544573_4 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 336.0
CMS1_k127_5544573_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000496 274.0
CMS1_k127_5549812_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 6.424e-235 732.0
CMS1_k127_5549812_1 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 466.0
CMS1_k127_5549812_2 Glycosyltransferase family 92 - - - 0.000000000000000001626 85.0
CMS1_k127_5551778_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1163.0
CMS1_k127_5551778_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 3.919e-277 859.0
CMS1_k127_5551778_10 - - - - 0.00000000000000000000002162 101.0
CMS1_k127_5551778_2 HDOD domain - - - 9.294e-217 677.0
CMS1_k127_5551778_3 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 412.0
CMS1_k127_5551778_4 PAP2 superfamily K12978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 358.0
CMS1_k127_5551778_5 helix_turn_helix, cAMP Regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 354.0
CMS1_k127_5551778_6 Outer membrane lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 292.0
CMS1_k127_5551778_7 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000005365 160.0
CMS1_k127_5551778_8 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000001044 137.0
CMS1_k127_5551778_9 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000000000513 119.0
CMS1_k127_5556478_0 ABC transporter K02029,K10037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 498.0
CMS1_k127_5556478_1 PFAM Extracellular solute-binding protein, family 3 K02030,K10036 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 452.0
CMS1_k127_5556478_2 ABC transporter K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 375.0
CMS1_k127_5556478_3 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 346.0
CMS1_k127_5556478_4 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01760 - 2.5.1.48,4.4.1.8 0.000000000000000000000000000001625 121.0
CMS1_k127_5559293_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 4.141e-318 977.0
CMS1_k127_5559293_1 acyl-CoA dehydrogenase - - - 1.168e-221 692.0
CMS1_k127_5559293_2 carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 570.0
CMS1_k127_5559293_3 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 474.0
CMS1_k127_5559293_4 Protein of unknown function (DUF523) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 296.0
CMS1_k127_5559293_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000002808 163.0
CMS1_k127_556235_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.125e-258 798.0
CMS1_k127_556235_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 1.695e-199 629.0
CMS1_k127_556235_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 8.674e-197 616.0
CMS1_k127_5567288_0 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.0 1067.0
CMS1_k127_5567288_1 Belongs to the ABC transporter superfamily K10823,K13896,K15583 - - 4.194e-294 907.0
CMS1_k127_5567288_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 1.197e-266 828.0
CMS1_k127_5567288_3 With YejAEF is involved in resistance to microcin C K13894 - - 6.588e-212 661.0
CMS1_k127_5567288_4 transport system, permease component K13895 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 569.0
CMS1_k127_5567288_5 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 296.0
CMS1_k127_5567288_6 - - - - 0.000000000000000000000000000419 115.0
CMS1_k127_5567841_0 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 439.0
CMS1_k127_5567841_1 Sodium proton antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 412.0
CMS1_k127_5567841_2 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 287.0
CMS1_k127_5567841_3 RDD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004639 252.0
CMS1_k127_5567841_4 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000006139 226.0
CMS1_k127_5567841_5 Phasin protein - - - 0.000000000000000000000000000000000000000000001219 168.0
CMS1_k127_5571279_0 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 480.0
CMS1_k127_5571279_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 334.0
CMS1_k127_5571279_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000003955 213.0
CMS1_k127_5571279_3 Belongs to the UPF0434 family K09791 - - 0.0000000000000000000000000000003113 123.0
CMS1_k127_5575732_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.219e-252 782.0
CMS1_k127_5575732_1 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 519.0
CMS1_k127_5575732_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 362.0
CMS1_k127_5615999_0 stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 493.0
CMS1_k127_5615999_1 competence protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 478.0
CMS1_k127_5615999_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 444.0
CMS1_k127_5615999_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 334.0
CMS1_k127_5615999_4 Nitrate and nitrite sensing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004648 277.0
CMS1_k127_5615999_5 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001385 280.0
CMS1_k127_5615999_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004237 252.0
CMS1_k127_5626724_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.141e-204 644.0
CMS1_k127_5626724_1 Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 568.0
CMS1_k127_5626724_2 Nitrogen regulatory protein P-II - - - 0.000000000000000000000000000000000000000000000000000000000001267 210.0
CMS1_k127_5626724_3 long-chain fatty acid transporting porin activity K09806 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000002352 104.0
CMS1_k127_5657261_0 flagellar hook-associated protein K02396 - - 2.783e-234 743.0
CMS1_k127_5657261_1 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 327.0
CMS1_k127_5657261_2 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000000000000000000000000000000000008875 215.0
CMS1_k127_5657261_3 Rod binding protein K02395 - - 0.0000000000000000000000000000000000000000001038 160.0
CMS1_k127_5657261_4 flagellar protein FliS K02422 - - 0.00000000000000000000000000009189 115.0
CMS1_k127_5671721_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 372.0
CMS1_k127_5671721_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303,K02304 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 293.0
CMS1_k127_5671721_2 ANTAR - - - 0.0000000000000000000000000000000000000000000003287 178.0
CMS1_k127_5679047_0 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 428.0
CMS1_k127_5679047_1 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 364.0
CMS1_k127_5679047_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000003833 228.0
CMS1_k127_5679047_3 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000005625 230.0
CMS1_k127_5681091_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.273e-304 933.0
CMS1_k127_5681091_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 320.0
CMS1_k127_5681091_2 - - - - 0.0000000002459 62.0
CMS1_k127_568529_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1564.0
CMS1_k127_568529_1 PFAM Acyl-CoA dehydrogenase, type 2 - - - 5.213e-243 752.0
CMS1_k127_568529_2 AraC-like ligand binding domain K02508 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 518.0
CMS1_k127_568529_3 COG1718 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 515.0
CMS1_k127_568529_4 PFAM flavin reductase domain protein FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 503.0
CMS1_k127_5690458_0 Chemotaxis sensory transducer family protein - - - 1.257e-264 824.0
CMS1_k127_5690458_1 COG3806 Anti-sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 325.0
CMS1_k127_5690458_2 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000000000000000000000000000000000000000000002437 218.0
CMS1_k127_5690458_3 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000002411 162.0
CMS1_k127_5690458_4 - - - - 0.00000001408 56.0
CMS1_k127_5698124_0 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.0 994.0
CMS1_k127_5698124_1 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 2.147e-253 786.0
CMS1_k127_5698124_2 ATPases associated with a variety of cellular activities K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 488.0
CMS1_k127_5698124_3 ABC-2 family transporter protein K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 473.0
CMS1_k127_5698124_4 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 463.0
CMS1_k127_5698124_5 NosL K19342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000107 268.0
CMS1_k127_5698124_6 - - - - 0.0000000000000000000000000000000000001274 142.0
CMS1_k127_5706529_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5e-324 994.0
CMS1_k127_5706529_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 3.808e-279 860.0
CMS1_k127_5706529_2 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 560.0
CMS1_k127_5706529_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 549.0
CMS1_k127_5706529_4 MJ0042 family finger-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 310.0
CMS1_k127_5706529_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001529 269.0
CMS1_k127_5706529_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000008692 224.0
CMS1_k127_5706529_7 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.000000000000000000000000000000000000000001825 157.0
CMS1_k127_5706529_8 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000001125 103.0
CMS1_k127_5707535_0 Amino acid kinase family K00928 - 2.7.2.4 2.955e-243 758.0
CMS1_k127_5707535_1 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 481.0
CMS1_k127_5707535_2 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000007475 252.0
CMS1_k127_5707535_3 PFAM CBS domain containing protein K06213 - - 0.0000000000000000000002012 101.0
CMS1_k127_5707535_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000000000000000005013 83.0
CMS1_k127_5715888_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.068e-254 787.0
CMS1_k127_5715888_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 479.0
CMS1_k127_5715888_2 Fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 392.0
CMS1_k127_5715888_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 327.0
CMS1_k127_5715888_4 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 299.0
CMS1_k127_5715888_5 membrane K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004501 259.0
CMS1_k127_5715888_6 SCP-2 sterol transfer family K03690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001456 261.0
CMS1_k127_5715888_7 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009559 241.0
CMS1_k127_5715888_8 Major facilitator K08224 - - 0.0000000000000000000000000004962 113.0
CMS1_k127_5720699_0 Circularly permuted ATP-grasp type 2 - - - 3.949e-268 850.0
CMS1_k127_5720699_1 Circularly permuted ATP-grasp type 2 - - - 4.045e-257 799.0
CMS1_k127_5720699_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 335.0
CMS1_k127_5720699_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000029 123.0
CMS1_k127_5720699_4 COG1404 Subtilisin-like serine proteases K14645 - - 0.00000005396 57.0
CMS1_k127_5723416_0 Ion transporter K08714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 386.0
CMS1_k127_5731436_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 1.123e-315 975.0
CMS1_k127_5731436_1 alanine symporter K03310 - - 1.748e-282 874.0
CMS1_k127_5731436_2 Alkylphosphonate utilization operon protein PhnA - - - 0.000000000000000000000000000000000000000000000000000000000000000002743 228.0
CMS1_k127_5731436_3 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.000000000000000000003043 98.0
CMS1_k127_5734_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1000.0
CMS1_k127_5734_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 538.0
CMS1_k127_5734_2 Chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 492.0
CMS1_k127_5734_3 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 487.0
CMS1_k127_5734_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 414.0
CMS1_k127_5734_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 374.0
CMS1_k127_5734_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 317.0
CMS1_k127_5734_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001435 259.0
CMS1_k127_5734_8 ATP synthase I chain - - - 0.000000000000000000000000000000000000000000000000000000000000000005667 227.0
CMS1_k127_5734_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000005158 137.0
CMS1_k127_5737273_0 containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 3.001e-263 813.0
CMS1_k127_5743794_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 1.287e-225 708.0
CMS1_k127_5743794_1 PEP-utilising enzyme, N-terminal K08483,K08484 GO:0003674,GO:0003824,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008965,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0016775,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0071704,GO:1901564,GO:1901698 2.7.3.9 1.213e-202 655.0
CMS1_k127_5743794_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 536.0
CMS1_k127_5743794_3 DUF1704 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 444.0
CMS1_k127_5743794_4 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 354.0
CMS1_k127_5743794_5 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 333.0
CMS1_k127_5743794_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 312.0
CMS1_k127_5743794_7 Flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000102 201.0
CMS1_k127_5743794_8 MgtC family K07507 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000000000000000155 193.0
CMS1_k127_5743794_9 COG3245 Cytochrome c5 - - - 0.00000000000000000000000000000000000000000000000000004635 187.0
CMS1_k127_5752759_0 Xanthine uracil K02824 - - 2.595e-245 761.0
CMS1_k127_5752759_1 protein conserved in bacteria - - - 1.184e-199 625.0
CMS1_k127_5752759_2 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 476.0
CMS1_k127_5752759_3 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009368 406.0
CMS1_k127_5755210_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 9.4e-323 991.0
CMS1_k127_5755210_1 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 319.0
CMS1_k127_5755210_2 Nitric oxide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003447 257.0
CMS1_k127_5755210_3 Cytochrome c K08738 - - 0.00000000000000000000000000000000000000000000000000000000000001623 216.0
CMS1_k127_5755210_4 pilin assembly protein - - - 0.000000000000000000000000000000000000000000000001762 176.0
CMS1_k127_5755210_5 inhibitor of MCP methylation, homolog of CheC K03409 - - 0.0000000000000000000000000000000000000000000004495 170.0
CMS1_k127_5775519_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.498e-296 913.0
CMS1_k127_5775519_1 Aminotransferase class-III - - - 5.592e-244 759.0
CMS1_k127_5775519_10 UPF0060 membrane protein K09771 - - 0.000000000000000000000000000000000000000000000000000007281 192.0
CMS1_k127_5775519_11 Protein of unknown function (DUF1272) K09984 - - 0.000000000000000000000000000000000000002239 149.0
CMS1_k127_5775519_12 ferric reductase - - - 0.000000000000000000000000001464 113.0
CMS1_k127_5775519_13 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000006439 107.0
CMS1_k127_5775519_14 KR domain K00059 - 1.1.1.100 0.0000000000000002521 80.0
CMS1_k127_5775519_2 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 7.08e-230 721.0
CMS1_k127_5775519_3 7TMR-DISM extracellular 2 - - - 3.829e-199 636.0
CMS1_k127_5775519_4 HDOD domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 2.669e-195 617.0
CMS1_k127_5775519_5 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 606.0
CMS1_k127_5775519_6 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 361.0
CMS1_k127_5775519_7 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 309.0
CMS1_k127_5775519_8 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
CMS1_k127_5775519_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.00000000000000000000000000000000000000000000000000000000000002566 216.0
CMS1_k127_5787719_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.0 1339.0
CMS1_k127_5787719_1 - - - - 0.00000000000000000000001014 103.0
CMS1_k127_5788215_0 alanine symporter K03310 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 1.431e-243 760.0
CMS1_k127_5788215_1 Fumarase C C-terminus K01744 - 4.3.1.1 4.117e-240 748.0
CMS1_k127_5788215_2 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003251 261.0
CMS1_k127_5791185_0 Dehydrogenase - - - 0.0 1171.0
CMS1_k127_5791185_1 transcriptional regulator K05596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 469.0
CMS1_k127_5791185_2 Ribosomal RNA large subunit methyltransferase D, RlmJ K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 397.0
CMS1_k127_5791185_3 Lysine exporter protein (LYSE YGGA) K06895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 296.0
CMS1_k127_5791185_4 PFAM cytochrome B561 - - - 0.000000000000000005836 88.0
CMS1_k127_58058_0 NAD FAD-binding protein K06954 - - 4.786e-256 795.0
CMS1_k127_58058_1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases - - - 1.159e-197 626.0
CMS1_k127_58058_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 378.0
CMS1_k127_58058_3 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 366.0
CMS1_k127_58058_4 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 279.0
CMS1_k127_58058_5 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004821 280.0
CMS1_k127_58058_6 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001166 261.0
CMS1_k127_58058_7 Tryptophan-rich protein (DUF2389) - - - 0.0000000000000000000000000000001169 125.0
CMS1_k127_58058_8 SnoaL-like domain - - - 0.000000000000000000000000000001172 126.0
CMS1_k127_58058_9 Sugar efflux transporter for intercellular exchange K15383 - - 0.00000000000000000000000001873 110.0
CMS1_k127_5811354_0 diguanylate cyclase - - - 6.719e-197 621.0
CMS1_k127_5811354_1 Universal stress protein UspA and related nucleotide-binding K14055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 544.0
CMS1_k127_5811354_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 251.0
CMS1_k127_5811354_3 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000000000000000000000000000000000000000000007866 224.0
CMS1_k127_5811354_4 Receptor - - - 0.000000000000000000001105 94.0
CMS1_k127_5814526_0 Amino-transferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 563.0
CMS1_k127_5814526_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 514.0
CMS1_k127_5814526_2 transcriptional regulator K05800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007553 259.0
CMS1_k127_5814526_3 ATPase kinase involved in NAD metabolism - - - 0.0000000000000000000000000000000000000000000000002887 178.0
CMS1_k127_5814526_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000006709 125.0
CMS1_k127_5818698_0 COG1305 Transglutaminase-like enzymes K22452 - 2.3.2.13 9.374e-292 908.0
CMS1_k127_5818698_1 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 494.0
CMS1_k127_5818698_2 ATPase, AAA K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000009137 223.0
CMS1_k127_5818698_3 Metal-dependent hydrolase K07043 - - 0.0000000001483 63.0
CMS1_k127_5827460_0 Tripartite tricarboxylate transporter TctA family - - - 2.278e-286 887.0
CMS1_k127_5827460_1 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 2.061e-196 620.0
CMS1_k127_5827460_2 Trap-type c4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 397.0
CMS1_k127_5827460_3 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 323.0
CMS1_k127_5827460_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000001644 141.0
CMS1_k127_5827460_5 Universal stress protein family - - - 0.00000000000000000000000000000673 124.0
CMS1_k127_5827460_6 Integrase core domain K07497 - - 0.0000355 46.0
CMS1_k127_5843873_0 Allophanate hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 591.0
CMS1_k127_5843873_1 Belongs to the D-glutamate cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007205 537.0
CMS1_k127_5843873_2 Domain of unknown function (DUF4392) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 530.0
CMS1_k127_5843873_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 450.0
CMS1_k127_5843873_4 Allophanate hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 421.0
CMS1_k127_5848153_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 353.0
CMS1_k127_5848153_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 334.0
CMS1_k127_5848153_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000002746 142.0
CMS1_k127_5848153_3 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.0000000000000000000000000001049 118.0
CMS1_k127_5856803_0 general secretion pathway protein K02461 - - 0.0000000000000000000000000000000000000000000000000000009739 206.0
CMS1_k127_5856803_1 Type II secretion system protein K K02460 - - 0.00000000000000000000000000000000000000000000000000003982 199.0
CMS1_k127_5856803_2 general secretion pathway protein K02462 - - 0.00000000000000001283 87.0
CMS1_k127_5856803_3 general secretion pathway protein K02457 - - 0.000000000000001429 81.0
CMS1_k127_5856803_4 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000000004324 80.0
CMS1_k127_5856803_5 General secretion pathway protein K02459,K02672,K02680 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000001379 77.0
CMS1_k127_5858543_0 MFS transporter permease - - - 3.373e-220 687.0
CMS1_k127_5858543_1 Belongs to the GcvT family K00605 - 2.1.2.10 1.086e-210 658.0
CMS1_k127_5858543_10 Thioredoxin domain - - - 0.0000000000000000000000000000002381 124.0
CMS1_k127_5858543_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 596.0
CMS1_k127_5858543_3 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 582.0
CMS1_k127_5858543_4 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 577.0
CMS1_k127_5858543_5 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 401.0
CMS1_k127_5858543_6 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K07006,K22343 - 1.14.13.238 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 396.0
CMS1_k127_5858543_7 Small Multidrug Resistance protein K03297,K11741 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000003796 162.0
CMS1_k127_5858543_8 transcriptional regulator K03892 - - 0.00000000000000000000000000000000000000000005593 162.0
CMS1_k127_5858543_9 - K22344 - 1.14.13.238 0.000000000000000000000000000000001836 135.0
CMS1_k127_5863276_0 Dehydrogenase K15371 - 1.4.1.2 0.0 2305.0
CMS1_k127_5863276_1 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009759 466.0
CMS1_k127_5863276_2 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 290.0
CMS1_k127_5863276_3 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 289.0
CMS1_k127_5863276_4 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) K00988 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000000008361 243.0
CMS1_k127_5863276_5 - - - - 0.000000000000000000000000000000002447 130.0
CMS1_k127_5864392_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1345.0
CMS1_k127_5864392_1 Converts isocitrate to alpha ketoglutarate K00031 - 1.1.1.42 2.675e-240 745.0
CMS1_k127_5864392_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 305.0
CMS1_k127_5864392_3 Molybdenum cofactor biosynthesis protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000334 245.0
CMS1_k127_5864392_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000004192 198.0
CMS1_k127_5864392_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000003525 151.0
CMS1_k127_5864392_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000004013 148.0
CMS1_k127_5864392_7 Cold-shock' K03704 - - 0.000000000000000000000000000000003984 129.0
CMS1_k127_5891353_0 helicase superfamily c-terminal domain K19789 - - 0.0 1019.0
CMS1_k127_5891353_1 COG0477 Permeases of the major facilitator superfamily - - - 2.398e-234 727.0
CMS1_k127_5891353_2 Hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 576.0
CMS1_k127_5891353_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 475.0
CMS1_k127_5891353_4 SMI1-KNR4 cell-wall - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001954 271.0
CMS1_k127_5891353_5 Peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006807 263.0
CMS1_k127_5891353_6 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000000001965 165.0
CMS1_k127_5891353_7 - - - - 0.0000001658 55.0
CMS1_k127_5897467_0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ K11910 - - 2.415e-262 818.0
CMS1_k127_5897467_1 SapC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 353.0
CMS1_k127_5899078_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 2.454e-231 717.0
CMS1_k127_5899078_1 COG0477 Permeases of the major facilitator superfamily K05820 - - 3.718e-205 643.0
CMS1_k127_5899078_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 556.0
CMS1_k127_5899078_3 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 433.0
CMS1_k127_5899078_4 PHB accumulation regulatory domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 296.0
CMS1_k127_5899078_5 - - - - 0.000000000000000000000000000000000000000000359 158.0
CMS1_k127_5906265_0 exporter - - - 1.846e-240 765.0
CMS1_k127_5906265_1 Tryptophan halogenase - - - 9.126e-195 614.0
CMS1_k127_5906265_2 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 483.0
CMS1_k127_5906265_3 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 374.0
CMS1_k127_5906265_4 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000001813 214.0
CMS1_k127_5906265_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000001231 174.0
CMS1_k127_5906265_6 Protein of unknown function (DUF3261) - - - 0.00000000000000000000000000000000001205 142.0
CMS1_k127_5945508_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1499.0
CMS1_k127_5945508_1 peptidylprolyl isomerase K03770 - 5.2.1.8 1.791e-304 943.0
CMS1_k127_5945508_2 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003452 241.0
CMS1_k127_5945508_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000000004653 171.0
CMS1_k127_5945508_4 Transposase K07485 - - 0.00000000000000001172 82.0
CMS1_k127_5949353_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.836e-296 912.0
CMS1_k127_5949353_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000006389 183.0
CMS1_k127_5949353_2 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000002623 145.0
CMS1_k127_5962205_0 glutamate--cysteine ligase - - - 1.02e-254 792.0
CMS1_k127_5962205_1 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 527.0
CMS1_k127_5962205_2 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.000006013 48.0
CMS1_k127_5964209_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.279e-216 674.0
CMS1_k127_5964209_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 416.0
CMS1_k127_5975374_0 Xanthine uracil vitamin C permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 451.0
CMS1_k127_5975374_1 Transport permease protein K01992 - - 0.000000000000000000000000000000001329 129.0
CMS1_k127_5979159_0 FMN_bind - - - 0.0 1057.0
CMS1_k127_5979159_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 454.0
CMS1_k127_5979159_2 Flavodoxin domain - - - 0.000007562 48.0
CMS1_k127_5980749_0 FAD binding domain K00481,K05712 - 1.14.13.127,1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 565.0
CMS1_k127_5980749_1 PFAM nucleoside recognition domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 529.0
CMS1_k127_5980749_2 TIGRFAM RarD protein K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 314.0
CMS1_k127_5980749_3 transcriptional regulator K03719 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009002 277.0
CMS1_k127_5990143_0 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 545.0
CMS1_k127_5990143_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000002233 213.0
CMS1_k127_5990143_2 protein conserved in bacteria K01227,K01447,K01448,K01876,K06385,K07260,K11060,K11062 - 3.2.1.96,3.4.17.14,3.5.1.28,6.1.1.12 0.000000000000000000000000000000000000000000000000000000000001827 220.0
CMS1_k127_5990143_3 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000001939 200.0
CMS1_k127_6038101_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.0 1073.0
CMS1_k127_6038101_1 Receptor - - - 1.377e-211 665.0
CMS1_k127_6038101_2 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 358.0
CMS1_k127_6038101_3 - - - - 0.00000000000000000000000000000000000000000000000000000001079 199.0
CMS1_k127_6051659_0 Chemotaxis protein histidine kinase and related K03407 - 2.7.13.3 0.0 1058.0
CMS1_k127_6051659_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 491.0
CMS1_k127_6051659_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 469.0
CMS1_k127_6051659_3 Flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 470.0
CMS1_k127_6051659_4 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 410.0
CMS1_k127_6051659_5 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 349.0
CMS1_k127_6062385_0 helicase K03722 - 3.6.4.12 0.0 1322.0
CMS1_k127_6062385_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 336.0
CMS1_k127_6062385_2 Cell division inhibitor SulA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006874 251.0
CMS1_k127_6079935_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.389e-264 819.0
CMS1_k127_6079935_1 Serine dehydratase - - - 8.671e-248 769.0
CMS1_k127_6079935_2 Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein K00605 - 2.1.2.10 1.844e-227 706.0
CMS1_k127_6079935_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 598.0
CMS1_k127_6079935_4 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 389.0
CMS1_k127_6079935_5 Choline/ethanolamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001129 267.0
CMS1_k127_6079935_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000006215 229.0
CMS1_k127_6081183_0 PFAM Amidohydrolase 3 - - - 7.271e-210 666.0
CMS1_k127_6081183_1 Rieske [2Fe-2S] domain K03862 - 1.14.13.82 9.283e-210 654.0
CMS1_k127_6081183_2 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 421.0
CMS1_k127_6081183_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000002008 190.0
CMS1_k127_6081183_4 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000004515 162.0
CMS1_k127_6081183_5 luxR family - - - 0.000000000000000000000000000000000000001231 157.0
CMS1_k127_6116820_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 1.315e-287 887.0
CMS1_k127_6116820_1 Uncharacterised MFS-type transporter YbfB - - - 1.897e-216 676.0
CMS1_k127_6116820_2 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 439.0
CMS1_k127_612037_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 2.127e-265 817.0
CMS1_k127_612037_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 507.0
CMS1_k127_612037_2 Tfp pilus assembly protein K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 380.0
CMS1_k127_612037_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007879 263.0
CMS1_k127_612037_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 255.0
CMS1_k127_6129003_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0 993.0
CMS1_k127_6129003_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 6.447e-273 845.0
CMS1_k127_6129003_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.535e-264 816.0
CMS1_k127_6129003_3 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 572.0
CMS1_k127_6129003_4 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 421.0
CMS1_k127_6129003_5 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000504 222.0
CMS1_k127_6135748_0 Ring hydroxylating alpha subunit (catalytic domain) K18242 - 1.14.13.172 1.863e-228 712.0
CMS1_k127_6135748_1 oxidoreductase FAD NAD(P)-binding K03863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 426.0
CMS1_k127_6135748_2 Trap-type c4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 377.0
CMS1_k127_6135748_3 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 324.0
CMS1_k127_6135748_4 Ring hydroxylating beta subunit - - - 0.0000000000000000000000000000000000000000000000000009414 187.0
CMS1_k127_6145384_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 584.0
CMS1_k127_6145384_1 Pyruvate formate lyase-activating protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000002749 184.0
CMS1_k127_6145384_2 Pyruvate formate lyase-activating protein K04069 - 1.97.1.4 0.00000000000000000000007953 98.0
CMS1_k127_6145384_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0008452,GO:0008664,GO:0016787,GO:0016788,GO:0016874,GO:0016886,GO:0042578,GO:0140098 3.1.4.58 0.000000000000000000006776 95.0
CMS1_k127_6174597_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1069.0
CMS1_k127_6174597_1 - - - - 3.978e-202 638.0
CMS1_k127_6174597_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 7.65e-198 619.0
CMS1_k127_6174597_3 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 420.0
CMS1_k127_6174597_4 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 304.0
CMS1_k127_6174597_5 PFAM Chemotaxis methyl-accepting receptor, signalling K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 318.0
CMS1_k127_6183846_0 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 527.0
CMS1_k127_6183846_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 320.0
CMS1_k127_6183846_10 - - - - 0.00000000000000007487 80.0
CMS1_k127_6183846_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 284.0
CMS1_k127_6183846_3 NfeD-like C-terminal, partner-binding K07340 - - 0.000000000000000000000000000000000000000000000000000000000000000000553 230.0
CMS1_k127_6183846_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000006962 233.0
CMS1_k127_6183846_5 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000003615 224.0
CMS1_k127_6183846_6 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000008556 197.0
CMS1_k127_6183846_7 - - - - 0.00000000000000000000000000000000000000000001444 162.0
CMS1_k127_6183846_8 Proteolipid membrane potential modulator - - - 0.000000000000000000000000000002083 121.0
CMS1_k127_6183846_9 - - - - 0.000000000000000000000000000004737 125.0
CMS1_k127_6184883_0 Two component signalling adaptor domain K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 507.0
CMS1_k127_6184883_1 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005484 248.0
CMS1_k127_6184883_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000001703 245.0
CMS1_k127_6196376_0 (ABC) transporter K12541 - - 0.0 1260.0
CMS1_k127_6196376_1 secretion protein K12542 - - 3.483e-251 782.0
CMS1_k127_6196376_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002961 227.0
CMS1_k127_6196376_11 protein conserved in bacteria K09796 - - 0.0000000000000000000000000000000000000000000000000000000000000002132 225.0
CMS1_k127_6196376_12 Sulfur oxidation protein SoxY - - - 0.00000000000000000000000000000000000000000000000001112 184.0
CMS1_k127_6196376_13 Sulphur oxidation protein SoxZ - - - 0.0000000000000000000000000000002815 125.0
CMS1_k127_6196376_14 von willebrand factor, type A - - - 0.0000008634 55.0
CMS1_k127_6196376_2 type I secretion outer membrane protein, TolC K12543 - - 9.43e-228 712.0
CMS1_k127_6196376_3 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 552.0
CMS1_k127_6196376_4 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 445.0
CMS1_k127_6196376_5 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 323.0
CMS1_k127_6196376_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 307.0
CMS1_k127_6196376_7 protein conserved in bacteria K09906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 298.0
CMS1_k127_6196376_8 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001559 258.0
CMS1_k127_6196376_9 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000006946 254.0
CMS1_k127_6197131_0 protein involved in outer membrane biogenesis K07289 - - 0.0 1185.0
CMS1_k127_6197131_1 glycosylase K03575 - - 8.954e-212 660.0
CMS1_k127_6197131_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 501.0
CMS1_k127_6197131_3 Aminotransferase K00813,K00832 - 2.6.1.1,2.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 497.0
CMS1_k127_6197131_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 423.0
CMS1_k127_6197131_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 398.0
CMS1_k127_6197131_6 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000000001022 172.0
CMS1_k127_6197131_7 DoxX K15977 - - 0.000000000000000000000000000000000000003498 150.0
CMS1_k127_6197131_8 - - - - 0.000000002441 58.0
CMS1_k127_6211887_0 Na H antiporter K03315 - - 2.697e-271 841.0
CMS1_k127_6211887_1 Aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 1.252e-233 728.0
CMS1_k127_6211887_10 synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 435.0
CMS1_k127_6211887_11 TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 429.0
CMS1_k127_6211887_12 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 420.0
CMS1_k127_6211887_13 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 403.0
CMS1_k127_6211887_14 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 384.0
CMS1_k127_6211887_15 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 291.0
CMS1_k127_6211887_16 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000009287 265.0
CMS1_k127_6211887_17 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000005732 230.0
CMS1_k127_6211887_18 Pilus assembly protein PilZ K02676 - - 0.000000000000000000000000000000000000000000000000000000000000000003815 226.0
CMS1_k127_6211887_19 sulfur relay protein TusD DsrE K07235 - - 0.000000000000000000000000000000000000000000000000000000000003412 210.0
CMS1_k127_6211887_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 3.051e-230 713.0
CMS1_k127_6211887_20 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000005267 205.0
CMS1_k127_6211887_21 Belongs to the DsrF TusC family K07236 - - 0.00000000000000000000000000000000000000000000000000000002535 198.0
CMS1_k127_6211887_22 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000001487 175.0
CMS1_k127_6211887_23 DsrH like protein K07237 - - 0.0000000000000000000000000000000000000006677 152.0
CMS1_k127_6211887_3 DNA polymerase III, delta subunit, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 599.0
CMS1_k127_6211887_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 594.0
CMS1_k127_6211887_5 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 556.0
CMS1_k127_6211887_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 539.0
CMS1_k127_6211887_7 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 468.0
CMS1_k127_6211887_8 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 452.0
CMS1_k127_6211887_9 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 451.0
CMS1_k127_6224991_0 Cache_2 - - - 4.175e-238 760.0
CMS1_k127_6245760_0 ATPase, AAA K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 530.0
CMS1_k127_6245760_1 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000002739 224.0
CMS1_k127_6249145_0 COG0501 Zn-dependent protease with chaperone function - - - 7.925e-313 967.0
CMS1_k127_6249145_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000007887 246.0
CMS1_k127_6249145_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000005631 169.0
CMS1_k127_6254786_0 Poly(3-hydroxyalkanoate) synthetase K03821 - - 5.908e-259 804.0
CMS1_k127_6254786_1 COG0084 Mg-dependent DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 413.0
CMS1_k127_6254786_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000002007 222.0
CMS1_k127_6254786_3 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K06191 - - 0.00000000000000000000000000000007968 125.0
CMS1_k127_627340_0 acetolactate synthase K01652 - 2.2.1.6 0.0 1113.0
CMS1_k127_627340_1 acetolactate synthase K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 302.0
CMS1_k127_627340_2 - - - - 0.0000000000000000000000000000000000008712 140.0
CMS1_k127_6282615_0 Amidohydrolase family K01464 - 3.5.2.2 3.399e-295 908.0
CMS1_k127_6282615_1 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 1.277e-195 612.0
CMS1_k127_6282615_2 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 340.0
CMS1_k127_6282615_3 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000000000000000000000000007862 181.0
CMS1_k127_629827_0 extracellular solute-binding K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 545.0
CMS1_k127_629827_1 TOBE domain K10191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 464.0
CMS1_k127_629827_10 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000005251 203.0
CMS1_k127_629827_11 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000001074 190.0
CMS1_k127_629827_2 Glycosyl hydrolases family 32 K03332 - 3.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 468.0
CMS1_k127_629827_3 Binding-protein-dependent transport systems inner membrane component K02025,K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009299 453.0
CMS1_k127_629827_4 probably responsible for the translocation of the substrate across the membrane K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 408.0
CMS1_k127_629827_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 314.0
CMS1_k127_629827_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 304.0
CMS1_k127_629827_7 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001181 286.0
CMS1_k127_629827_8 Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000000003351 258.0
CMS1_k127_629827_9 Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000001129 221.0
CMS1_k127_650519_0 chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 540.0
CMS1_k127_650519_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 387.0
CMS1_k127_650519_2 Protein of unknown function (DUF416) K09891 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 334.0
CMS1_k127_650519_3 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008817 297.0
CMS1_k127_650519_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000009051 220.0
CMS1_k127_650519_5 CheW-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000544 211.0
CMS1_k127_650519_6 COG0784 FOG CheY-like receiver K02658 - - 0.00000000000000000000000000000000000000000000000000000005749 198.0
CMS1_k127_650519_7 - - - - 0.00000000000000000000000000000001251 128.0
CMS1_k127_668333_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1391.0
CMS1_k127_668333_1 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 2.914e-235 740.0
CMS1_k127_668333_2 pyrophosphohydrolase K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 454.0
CMS1_k127_668333_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 428.0
CMS1_k127_668333_4 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 336.0
CMS1_k127_668333_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000005997 252.0
CMS1_k127_668333_6 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003957 240.0
CMS1_k127_668333_7 - - - - 0.000000000000000000000000000000000000000000000000003771 183.0
CMS1_k127_668333_8 copG family - - - 0.00000000000000000000003633 99.0
CMS1_k127_694334_0 COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 6.309e-201 629.0
CMS1_k127_694334_1 Bacterial transcriptional regulator K21602 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 425.0
CMS1_k127_73860_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.203e-275 850.0
CMS1_k127_73860_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 600.0
CMS1_k127_73860_2 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 400.0
CMS1_k127_73860_3 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 395.0
CMS1_k127_73860_4 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 307.0
CMS1_k127_73860_5 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000001203 230.0
CMS1_k127_73860_6 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000001784 69.0
CMS1_k127_73860_7 Biotin-lipoyl like K03543 - - 0.0000007138 53.0
CMS1_k127_73860_8 the major facilitator superfamily K03446 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000002746 49.0
CMS1_k127_74935_0 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 1.02e-293 902.0
CMS1_k127_74935_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 2.551e-258 797.0
CMS1_k127_74935_10 - - - - 0.000000000000000000000000000000000000000000000000001027 185.0
CMS1_k127_74935_11 PilZ domain - - - 0.000000000000000000000000000000001334 136.0
CMS1_k127_74935_12 protein conserved in bacteria K05952 - - 0.00000000000000000000009256 100.0
CMS1_k127_74935_2 Lipoprotein releasing system, transmembrane protein K09808 - - 5.898e-216 676.0
CMS1_k127_74935_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 494.0
CMS1_k127_74935_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 441.0
CMS1_k127_74935_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 411.0
CMS1_k127_74935_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 395.0
CMS1_k127_74935_7 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 375.0
CMS1_k127_74935_8 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 286.0
CMS1_k127_74935_9 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000004101 203.0
CMS1_k127_806356_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 6.13e-202 630.0
CMS1_k127_806356_1 COG0859 ADP-heptose LPS heptosyltransferase K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 560.0
CMS1_k127_806356_2 Histidine kinase K07675,K20263 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 310.0
CMS1_k127_806356_3 - - - - 0.0000000004921 60.0
CMS1_k127_815800_0 Belongs to the BCCT transporter (TC 2.A.15) family K03451 - - 6.07e-285 882.0
CMS1_k127_815800_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 484.0
CMS1_k127_815800_2 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 450.0
CMS1_k127_815800_3 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000000000000000000000000000000000000000000000000000007249 200.0
CMS1_k127_827605_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 1.72e-215 673.0
CMS1_k127_827605_1 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 296.0
CMS1_k127_827605_2 Domain of unknown function (DUF1127) - - - 0.0000001017 57.0
CMS1_k127_829277_0 PFAM CBS domain containing protein K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 420.0
CMS1_k127_838815_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1161.0
CMS1_k127_838815_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 2.353e-269 832.0
CMS1_k127_838815_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 7.202e-213 663.0
CMS1_k127_838815_3 FAD linked oxidases, C-terminal domain K18930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 575.0
CMS1_k127_838815_4 transcriptional regulator K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 474.0
CMS1_k127_838815_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 293.0
CMS1_k127_850599_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 8.53e-211 664.0
CMS1_k127_850599_1 COG0412 Dienelactone hydrolase and related enzymes K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 532.0
CMS1_k127_850599_2 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 501.0
CMS1_k127_850599_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 388.0
CMS1_k127_850599_4 Histidine kinase K07646 - 2.7.13.3 0.0000007138 53.0
CMS1_k127_850599_5 Transcriptional regulator - - - 0.00001206 47.0
CMS1_k127_860681_0 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 373.0
CMS1_k127_860681_1 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 301.0
CMS1_k127_860681_2 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000108 163.0
CMS1_k127_863273_0 POTRA domain K07326 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 317.0
CMS1_k127_863273_1 large exoproteins involved in heme utilization or adhesion K15125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008309 284.0
CMS1_k127_863273_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.00000000000000002815 83.0
CMS1_k127_8732_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 7.756e-278 860.0
CMS1_k127_8732_1 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 592.0
CMS1_k127_8732_2 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 341.0
CMS1_k127_8732_3 Belongs to the Rsd AlgQ family K07740 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005961 269.0
CMS1_k127_8732_4 Flagellar basal body-associated protein FliL - - - 0.0000000000000000000000000000000000000000000000000000000000000000151 225.0
CMS1_k127_8732_5 - - - - 0.00000000000000000000000000000000000000000000000000000001007 203.0
CMS1_k127_8732_7 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000001124 107.0
CMS1_k127_8732_8 - - - - 0.000000000000000000257 93.0
CMS1_k127_8732_9 ABC transporter K09972 - - 0.0000000000000000003193 86.0
CMS1_k127_88210_0 PrkA family serine protein kinase K07180 - - 1.005e-238 740.0
CMS1_k127_88210_1 1-deoxy-D-xylulose-5-phosphate synthase K00161 - 1.2.4.1 2.48e-200 629.0
CMS1_k127_88210_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627,K09699 - 2.3.1.12,2.3.1.168 1.492e-199 626.0
CMS1_k127_88210_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 549.0
CMS1_k127_88210_4 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 520.0
CMS1_k127_88210_5 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 468.0
CMS1_k127_88210_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 302.0
CMS1_k127_896497_0 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.0 1275.0
CMS1_k127_896497_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 1.152e-200 629.0
CMS1_k127_896497_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 460.0
CMS1_k127_896497_4 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 291.0
CMS1_k127_896497_5 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 287.0
CMS1_k127_905170_0 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 407.0
CMS1_k127_905170_1 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 363.0
CMS1_k127_912317_0 Diguanylate cyclase K21024 - 3.1.4.52 0.0 1553.0
CMS1_k127_912317_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 2.594e-195 615.0
CMS1_k127_912317_2 (ABC) transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 546.0
CMS1_k127_912317_3 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 386.0
CMS1_k127_912317_4 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000001391 228.0
CMS1_k127_912317_5 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000000003443 115.0
CMS1_k127_912317_6 - - - - 0.000000389 53.0
CMS1_k127_912317_7 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879 - 1.7.1.13 0.0001603 46.0
CMS1_k127_912574_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.0 1654.0
CMS1_k127_912574_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1589.0
CMS1_k127_912574_10 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 334.0
CMS1_k127_912574_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003744 266.0
CMS1_k127_912574_12 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000001376 198.0
CMS1_k127_912574_13 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000000000000000000000000001777 183.0
CMS1_k127_912574_14 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000003791 123.0
CMS1_k127_912574_15 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000000000002319 113.0
CMS1_k127_912574_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.739e-276 852.0
CMS1_k127_912574_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 7.981e-267 827.0
CMS1_k127_912574_4 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004911 603.0
CMS1_k127_912574_5 lysine 2,3-aminomutase K19810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 567.0
CMS1_k127_912574_6 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 550.0
CMS1_k127_912574_7 transporter K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 514.0
CMS1_k127_912574_8 GGDEF domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 418.0
CMS1_k127_912574_9 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 380.0
CMS1_k127_918120_0 Serine Threonine protein K20074 - 3.1.3.16 2.776e-280 871.0
CMS1_k127_918120_1 xanthine K03458,K16345,K16346 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823 - 1.798e-219 687.0
CMS1_k127_918120_10 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001396 258.0
CMS1_k127_918120_11 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000001605 236.0
CMS1_k127_918120_12 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000003617 132.0
CMS1_k127_918120_13 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000003068 126.0
CMS1_k127_918120_14 - - - - 0.000000003353 60.0
CMS1_k127_918120_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 502.0
CMS1_k127_918120_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 484.0
CMS1_k127_918120_4 Formate/nitrite transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 484.0
CMS1_k127_918120_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 405.0
CMS1_k127_918120_6 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 384.0
CMS1_k127_918120_7 Nucleoside-specific channel-forming protein, Tsx - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 299.0
CMS1_k127_918120_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 289.0
CMS1_k127_918120_9 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000154 273.0
CMS1_k127_927500_0 Threonine synthase K01733 - 4.2.3.1 2.403e-294 904.0
CMS1_k127_927500_1 homoserine dehydrogenase K00003 - 1.1.1.3 1.375e-271 842.0
CMS1_k127_927500_2 exonuclease recJ K07462 - - 3.863e-216 674.0
CMS1_k127_927500_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 395.0
CMS1_k127_927500_4 PFAM DUF218 domain - GO:0000270,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0030203,GO:0031224,GO:0042546,GO:0043164,GO:0043170,GO:0044085,GO:0044425,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000004661 240.0
CMS1_k127_928699_0 oxidoreductase activity - - - 7.945e-219 712.0
CMS1_k127_928699_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K18219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 446.0
CMS1_k127_928699_2 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000554 278.0
CMS1_k127_928699_3 Type II secretory pathway component ExeA K02450 - - 0.0000000000000000000000000000000000000000000000000000000000002185 216.0
CMS1_k127_934911_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1278.0
CMS1_k127_934911_1 Diguanylate cyclase - - - 0.0 1011.0
CMS1_k127_934911_10 - - - - 0.0000005471 52.0
CMS1_k127_934911_11 - - - - 0.000001086 50.0
CMS1_k127_934911_2 Putative diguanylate phosphodiesterase - - - 5.394e-288 893.0
CMS1_k127_934911_3 ErfK YbiS YcfS YnhG family protein K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 576.0
CMS1_k127_934911_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005639 293.0
CMS1_k127_934911_5 cytochrome c5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000817 242.0
CMS1_k127_934911_6 ATPase with chaperone activity K07391 GO:0003674,GO:0003824,GO:0004176,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0042623,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000002543 231.0
CMS1_k127_934911_7 Bacterial protein of unknown function (DUF882) - - - 0.000000000000001906 79.0
CMS1_k127_934911_8 - - - - 0.0000000007658 61.0
CMS1_k127_934911_9 helix_turn_helix, Lux Regulon - - - 0.000000003137 67.0
CMS1_k127_937750_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 6.086e-213 664.0
CMS1_k127_937750_1 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 471.0
CMS1_k127_937750_2 Belongs to the flagella basal body rod proteins family K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 420.0
CMS1_k127_937750_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 398.0
CMS1_k127_937750_4 Rod binding protein K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003854 275.0
CMS1_k127_940908_0 signal transduction protein containing EAL and modified HD-GYP domains - - - 6.925e-224 698.0
CMS1_k127_940908_1 HI0933-like protein K07007 - - 1.113e-223 696.0
CMS1_k127_940908_2 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 575.0
CMS1_k127_940908_3 maleylacetoacetate isomerase K01800 - 5.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004369 269.0
CMS1_k127_940908_4 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000000000000000000000000000000111 169.0
CMS1_k127_940908_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000005563 131.0
CMS1_k127_940908_6 - - - - 0.00000000000000000000000000000003221 128.0
CMS1_k127_940908_7 LysR substrate binding domain - - - 0.000000000000000000000000000008331 121.0
CMS1_k127_944401_0 ABC transporter K06147,K11085 - - 3.9e-322 993.0
CMS1_k127_944401_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 485.0
CMS1_k127_944401_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 357.0
CMS1_k127_944401_3 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 304.0
CMS1_k127_944401_4 Cupin domain K11312 - - 0.000000000000002219 75.0
CMS1_k127_953851_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.627e-241 750.0
CMS1_k127_953851_1 Belongs to the thiolase family K00626 - 2.3.1.9 1.097e-237 737.0
CMS1_k127_953851_10 Cold-shock' K03704 - - 0.000000000000000000000000000000007076 127.0
CMS1_k127_953851_2 Oxidoreductase FAD-binding domain K02613 - - 3.351e-212 661.0
CMS1_k127_953851_3 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 6.083e-196 612.0
CMS1_k127_953851_4 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 495.0
CMS1_k127_953851_5 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 385.0
CMS1_k127_953851_6 phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 325.0
CMS1_k127_953851_7 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000001037 219.0
CMS1_k127_953851_8 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000000000000000000000005738 207.0
CMS1_k127_953851_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000005894 165.0
CMS1_k127_955351_0 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 444.0
CMS1_k127_955351_1 acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 355.0
CMS1_k127_955351_2 PFAM OsmC family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 305.0
CMS1_k127_961554_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 581.0
CMS1_k127_961554_1 Belongs to the DnaA family. HdA subfamily K10763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 370.0
CMS1_k127_961554_2 protein conserved in bacteria K09938 - - 0.00000000000000000000000002366 109.0
CMS1_k127_96396_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 509.0
CMS1_k127_96396_1 reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 418.0
CMS1_k127_96396_2 haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000001371 261.0
CMS1_k127_96396_3 H-NS histone family - - - 0.000000000000000000001879 93.0
CMS1_k127_966647_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 2.244e-197 617.0
CMS1_k127_966647_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 557.0
CMS1_k127_966647_2 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 310.0
CMS1_k127_966647_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 289.0
CMS1_k127_966647_4 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001455 246.0
CMS1_k127_966647_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000278 222.0
CMS1_k127_966647_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000000000000000007814 220.0
CMS1_k127_966647_8 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000000000008132 136.0
CMS1_k127_971996_0 AMP-binding enzyme K12508 - 6.2.1.34 1.799e-245 772.0
CMS1_k127_971996_1 acyl-CoA dehydrogenase K09456 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003995,GO:0005488,GO:0005515,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008470,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016491,GO:0016627,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0033554,GO:0042802,GO:0043565,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055114,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 514.0
CMS1_k127_971996_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 383.0
CMS1_k127_971996_3 Transcriptional regulator, AraC family - - - 0.00000000000000000000005422 108.0
CMS1_k127_972577_0 COG2252 Permeases K06901 - - 7.452e-265 820.0
CMS1_k127_972577_1 Lysine exporter protein (LysE YggA) K05834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001758 246.0
CMS1_k127_973758_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 426.0
CMS1_k127_973758_1 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 284.0
CMS1_k127_973758_2 Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008023 241.0
CMS1_k127_985106_0 Sigma-54 interaction domain - - - 2.179e-225 704.0
CMS1_k127_985106_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002205 263.0
CMS1_k127_985106_2 cytochrome d ubiquinol oxidase, subunit K00426 - 1.10.3.14 0.0000000000000005846 79.0
CMS1_k127_99710_0 HDOD domain - - - 9.376e-242 754.0
CMS1_k127_99710_1 Protein of unknown function (DUF3422) - - - 8.366e-230 716.0
CMS1_k127_99710_2 Ion transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 520.0
CMS1_k127_99710_3 gag-polyprotein putative aspartyl protease K06985 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 282.0
CMS1_k127_99710_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000002147 168.0
CMS1_k127_99710_5 OmpA-like transmembrane domain - - - 0.0000000000000000000000000000002114 130.0
CMS1_k127_997905_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1199.0
CMS1_k127_997905_1 PFAM sigma-54 factor interaction domain-containing protein, Activator of aromatic catabolism, helix-turn-helix Fis-type, 4-vinyl reductase 4VR - - - 4.726e-271 844.0
CMS1_k127_997905_10 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 288.0
CMS1_k127_997905_11 protein, possibly involved in utilization of glycolate and propanediol - - - 0.00000000000000000000000000121 116.0
CMS1_k127_997905_2 in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon K13634 - - 3.239e-196 613.0
CMS1_k127_997905_3 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 586.0
CMS1_k127_997905_4 Plasmid replication region DNA-binding N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 540.0
CMS1_k127_997905_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 537.0
CMS1_k127_997905_6 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 443.0
CMS1_k127_997905_7 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 411.0
CMS1_k127_997905_8 phenylacetic acid degradation operon negative regulatory protein K02616 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006082,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006805,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010124,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010817,GO:0016054,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019748,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0032774,GO:0032787,GO:0034641,GO:0034645,GO:0034654,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043170,GO:0043254,GO:0043436,GO:0043565,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044282,GO:0045892,GO:0045934,GO:0046395,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098754,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 379.0
CMS1_k127_997905_9 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 339.0
CMS1_k127_998940_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.769e-286 883.0
CMS1_k127_998940_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 3.884e-229 715.0
CMS1_k127_998940_2 Peptidoglycan polymerase that is essential for cell division K03588 - - 3.349e-219 684.0
CMS1_k127_998940_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 1.285e-217 677.0
CMS1_k127_998940_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 606.0
CMS1_k127_998940_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 539.0
CMS1_k127_998940_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 394.0
CMS1_k127_998940_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000001241 186.0
CMS1_k127_999407_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 6.577e-273 859.0
CMS1_k127_999407_1 protein conserved in bacteria K09928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001392 282.0
CMS1_k127_999407_2 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000133 192.0
CMS1_k127_999969_0 ABC transporter - - - 2.96e-322 991.0
CMS1_k127_999969_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 1.859e-290 895.0
CMS1_k127_999969_2 Biotin carboxylase - - - 2.278e-286 885.0
CMS1_k127_999969_3 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 571.0
CMS1_k127_999969_4 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 350.0
CMS1_k127_999969_5 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 309.0
CMS1_k127_999969_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004895 263.0
CMS1_k127_999969_7 Chlorhexidine efflux transporter - - - 0.000392 44.0