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Overview

ID MAG00338
Name CMS1_bin.153
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Campylobacterota
Class Campylobacteria
Order Campylobacterales
Family Sulfurimonadaceae
Genus S145-25
Species
Assembly information
Completeness (%) 87.27
Contamination (%) 3.42
GC content (%) 51.0
N50 (bp) 10,150
Genome size (bp) 2,069,628

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2036

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1016213_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 440.0
CMS1_k127_1016213_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 382.0
CMS1_k127_1016213_2 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000002793 211.0
CMS1_k127_1053781_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1365.0
CMS1_k127_1053781_1 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 1.139e-242 755.0
CMS1_k127_1053781_10 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006756 277.0
CMS1_k127_1053781_11 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005208 240.0
CMS1_k127_1053781_12 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000001932 201.0
CMS1_k127_1053781_13 Biopolymer transporter ExbB K03561 - - 0.0000000000000000000000000000000000000000000000000000000701 198.0
CMS1_k127_1053781_14 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000008373 195.0
CMS1_k127_1053781_15 ADP-ribose pyrophosphatase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000002091 165.0
CMS1_k127_1053781_16 biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000003745 160.0
CMS1_k127_1053781_17 START domain - - - 0.0000000000000000000000000007738 123.0
CMS1_k127_1053781_18 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000002892 103.0
CMS1_k127_1053781_19 - - - - 0.0000000000000007696 82.0
CMS1_k127_1053781_2 Ammonium Transporter K03320 - - 1.957e-224 703.0
CMS1_k127_1053781_20 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.00000000001525 69.0
CMS1_k127_1053781_21 Short repeat of unknown function (DUF308) - - - 0.000000005486 64.0
CMS1_k127_1053781_3 Ammonium Transporter K03320 - - 1.231e-207 651.0
CMS1_k127_1053781_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 5.061e-194 607.0
CMS1_k127_1053781_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 553.0
CMS1_k127_1053781_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 532.0
CMS1_k127_1053781_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 361.0
CMS1_k127_1053781_8 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 319.0
CMS1_k127_1053781_9 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 283.0
CMS1_k127_1058967_0 Diguanylate cyclase phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 412.0
CMS1_k127_1058967_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 310.0
CMS1_k127_1058967_2 Protein of unknown function (DUF3373) - - - 0.0000000000000000000000001033 122.0
CMS1_k127_1060028_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 336.0
CMS1_k127_1060028_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000002807 228.0
CMS1_k127_1060028_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000001049 190.0
CMS1_k127_1060028_3 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000001733 117.0
CMS1_k127_1060028_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000004619 104.0
CMS1_k127_108176_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 492.0
CMS1_k127_108176_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 353.0
CMS1_k127_108176_2 - - - - 0.0000000000000000000000000000000000000000000000000008902 190.0
CMS1_k127_108176_3 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000001062 194.0
CMS1_k127_108176_4 GGDEF domain - - - 0.0000000000000000000000000000000005835 149.0
CMS1_k127_108176_5 LrgA family K06518 - - 0.0000000000000000000009015 100.0
CMS1_k127_1083642_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 6.727e-230 726.0
CMS1_k127_1083642_1 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 406.0
CMS1_k127_1083642_2 CMP dCMP deaminase K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000004517 243.0
CMS1_k127_1088528_0 Prepilin-type N-terminal cleavage methylation domain - - - 0.0000000000000000000000000000000000000000000000000000000000001443 223.0
CMS1_k127_1088528_1 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.00000000000000000000000000000000000000000000000000000464 194.0
CMS1_k127_1088528_2 - - - - 0.000000000000000000000001036 109.0
CMS1_k127_1088528_3 type IV pilus modification protein PilV - - - 0.00001248 53.0
CMS1_k127_1090810_0 Hpt sensor hybrid histidine kinase - - - 4.916e-250 799.0
CMS1_k127_1090810_1 COGs COG1252 NADH dehydrogenase FAD-containing subunit K17218 - 1.8.5.4 3.915e-201 628.0
CMS1_k127_1090810_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000009164 147.0
CMS1_k127_1090810_2 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 501.0
CMS1_k127_1090810_3 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 365.0
CMS1_k127_1090810_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 288.0
CMS1_k127_1090810_5 COG0242 N-formylmethionyl-tRNA deformylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009453 276.0
CMS1_k127_1090810_6 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001276 272.0
CMS1_k127_1090810_7 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003812 264.0
CMS1_k127_1090810_8 - - - - 0.00000000000000000000000000000000000000000000346 169.0
CMS1_k127_1090810_9 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000425 157.0
CMS1_k127_1101688_0 glutamine synthetase K01915 - 6.3.1.2 1.652e-299 921.0
CMS1_k127_1101688_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.548e-285 884.0
CMS1_k127_1101688_10 Pfam:DUF479 - - - 0.00000000000000000000000000000000000000000000002274 178.0
CMS1_k127_1101688_12 NfeD-like C-terminal, partner-binding - - - 0.000000000000000003776 89.0
CMS1_k127_1101688_13 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000004534 79.0
CMS1_k127_1101688_2 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.05e-257 816.0
CMS1_k127_1101688_3 NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 536.0
CMS1_k127_1101688_4 8-amino-7-oxononanoate synthase K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 445.0
CMS1_k127_1101688_5 Membrane protease subunits - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 400.0
CMS1_k127_1101688_6 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 341.0
CMS1_k127_1101688_7 abc transporter atp-binding protein K02031,K15587 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 317.0
CMS1_k127_1101688_8 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006055 259.0
CMS1_k127_1101688_9 nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004383 246.0
CMS1_k127_1105976_0 Belongs to the aldehyde dehydrogenase family - - - 3.797e-241 752.0
CMS1_k127_1105976_1 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009771 364.0
CMS1_k127_1105976_2 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 340.0
CMS1_k127_1105976_3 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000007266 249.0
CMS1_k127_1105976_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001176 226.0
CMS1_k127_1105976_5 COG2346 Truncated hemoglobins K06886 - - 0.000000000000000000000000000000000000000000000000003043 186.0
CMS1_k127_1105976_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000009285 184.0
CMS1_k127_1105976_7 Protein of unknown function (DUF523) - - - 0.00000000000000000000000000000000000000335 150.0
CMS1_k127_1105976_8 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000004335 114.0
CMS1_k127_1139897_0 Major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 411.0
CMS1_k127_1139897_1 mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000001824 203.0
CMS1_k127_1139897_2 - - - - 0.00000000000000000000000000000000000000000000000000004191 203.0
CMS1_k127_1139897_3 RDD family - - - 0.00000000000000000000000000000000000000000001029 167.0
CMS1_k127_1139897_4 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000002147 144.0
CMS1_k127_1139897_5 - - - - 0.000000005044 58.0
CMS1_k127_1139897_6 - - - - 0.00000009445 53.0
CMS1_k127_1139897_7 - - - - 0.00002161 46.0
CMS1_k127_1168857_0 Sulfate permease family - - - 2.919e-231 725.0
CMS1_k127_1168857_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 323.0
CMS1_k127_1168857_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000578 287.0
CMS1_k127_118891_0 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 592.0
CMS1_k127_118891_1 hmm pf00534 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 411.0
CMS1_k127_118891_2 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 304.0
CMS1_k127_118891_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000001909 239.0
CMS1_k127_118891_4 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000004964 176.0
CMS1_k127_118891_5 signal transduction sensor histidine kinase - - - 0.0000000000000000000006639 96.0
CMS1_k127_1226835_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 5.853e-207 651.0
CMS1_k127_1226835_1 Nitrogen fixation protein NifU - - - 0.000000000000000000000000000000000000000000001015 166.0
CMS1_k127_1226835_2 - - - - 0.00000000000000000000000000000000000002394 151.0
CMS1_k127_1226835_3 Aldo/keto reductase family - - - 0.000000000000000000000007249 102.0
CMS1_k127_122958_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.24e-232 725.0
CMS1_k127_122958_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000332 192.0
CMS1_k127_122958_2 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000005819 149.0
CMS1_k127_1236339_0 Biotin carboxylase K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 9.933e-257 797.0
CMS1_k127_1236339_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 4.12e-212 663.0
CMS1_k127_1236339_2 PFAM Bacterial transcription activator, effector binding domain K13652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 439.0
CMS1_k127_1236339_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 419.0
CMS1_k127_1236339_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 325.0
CMS1_k127_1236339_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000001375 204.0
CMS1_k127_1258107_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 304.0
CMS1_k127_1258107_1 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 306.0
CMS1_k127_1258107_2 Heterodisulfide reductase subunit B K00241 - - 0.000000000000000000000000000000000000000000000000005298 181.0
CMS1_k127_1258107_3 MreB/Mbl protein K03569 - - 0.0000000002431 68.0
CMS1_k127_1258107_4 BPTI/Kunitz family of serine protease inhibitors. - - - 0.00001261 54.0
CMS1_k127_1274671_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 530.0
CMS1_k127_1274671_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000003145 167.0
CMS1_k127_1274671_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000009609 159.0
CMS1_k127_1274671_3 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000008971 132.0
CMS1_k127_1274671_4 thiamine biosynthesis protein ThiS K03154 - - 0.00000000000000000001075 93.0
CMS1_k127_1286206_0 UPF0313 protein - - - 0.0 1005.0
CMS1_k127_1286206_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 354.0
CMS1_k127_1286206_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 347.0
CMS1_k127_1286206_3 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000361 261.0
CMS1_k127_1286206_4 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005413 266.0
CMS1_k127_1286206_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000005659 262.0
CMS1_k127_1286206_6 PFAM NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000005541 190.0
CMS1_k127_1286206_7 protein conserved in bacteria K09973 - - 0.0000000000000000000000000000000000000000000000006481 186.0
CMS1_k127_1286206_8 - - - - 0.000000004588 57.0
CMS1_k127_1303358_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 398.0
CMS1_k127_1303358_1 PFAM Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008573 271.0
CMS1_k127_1303358_2 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.00000000000000000000000000000000001296 136.0
CMS1_k127_1303358_3 - - - - 0.000000000002257 75.0
CMS1_k127_1315979_0 Permease, YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 399.0
CMS1_k127_1315979_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 334.0
CMS1_k127_1315979_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 314.0
CMS1_k127_1315979_3 Peptidase A24 K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007726 282.0
CMS1_k127_1315979_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000003677 231.0
CMS1_k127_133794_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1429.0
CMS1_k127_133794_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.17e-277 861.0
CMS1_k127_133794_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.354e-265 819.0
CMS1_k127_133794_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000001597 207.0
CMS1_k127_133794_4 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000001143 203.0
CMS1_k127_133794_5 - - - - 0.00000000000000000000001465 104.0
CMS1_k127_133794_7 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.0000000000004959 69.0
CMS1_k127_1363242_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 1891.0
CMS1_k127_1363242_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.601e-242 752.0
CMS1_k127_1363242_10 Serine hydrolase K07002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 302.0
CMS1_k127_1363242_11 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000198 280.0
CMS1_k127_1363242_12 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002052 275.0
CMS1_k127_1363242_13 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000000000000000000000000000000000000000000000000000000000000003971 238.0
CMS1_k127_1363242_14 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000000000000000000000000000000000000000000000000000000000000008198 236.0
CMS1_k127_1363242_15 - K08993 - - 0.0000000000000000000000000000000000000000000000000000000001175 209.0
CMS1_k127_1363242_16 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000008451 203.0
CMS1_k127_1363242_17 - - - - 0.000000000000000000000000000000000000000000000000001897 195.0
CMS1_k127_1363242_18 Fad-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000002846 179.0
CMS1_k127_1363242_19 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000000000006338 139.0
CMS1_k127_1363242_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 597.0
CMS1_k127_1363242_20 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000002957 117.0
CMS1_k127_1363242_21 and ankyrin repeat domains - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005929,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010941,GO:0010942,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0042981,GO:0042995,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0060548,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0097546,GO:0120025,GO:0120038,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000307 117.0
CMS1_k127_1363242_22 - - - - 0.0000000000000000009377 89.0
CMS1_k127_1363242_23 AMIN domain - - - 0.0000000002169 68.0
CMS1_k127_1363242_24 phage repressor - - - 0.0000000005062 66.0
CMS1_k127_1363242_25 - - - - 0.00000004287 59.0
CMS1_k127_1363242_26 - - - - 0.00001053 49.0
CMS1_k127_1363242_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 514.0
CMS1_k127_1363242_4 RNA-binding protein homologous to eukaryotic snRNP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 511.0
CMS1_k127_1363242_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 490.0
CMS1_k127_1363242_6 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 459.0
CMS1_k127_1363242_7 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 441.0
CMS1_k127_1363242_8 PFAM Ferredoxin thioredoxin reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 345.0
CMS1_k127_1363242_9 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 341.0
CMS1_k127_137289_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.5e-323 998.0
CMS1_k127_137289_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 594.0
CMS1_k127_137289_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000000006315 151.0
CMS1_k127_137289_2 Malate quinone- oxidoreductase K00116 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 512.0
CMS1_k127_137289_3 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 436.0
CMS1_k127_137289_4 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 302.0
CMS1_k127_137289_5 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000131 257.0
CMS1_k127_137289_6 - K07283 - - 0.0000000000000000000000000000000000000000000000000000000003159 219.0
CMS1_k127_137289_7 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000005919 203.0
CMS1_k127_137289_8 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000001428 188.0
CMS1_k127_1392367_0 Mitochondrial degradasome RNA helicase subunit C terminal K17675 - 3.6.4.13 3.82e-318 999.0
CMS1_k127_1392367_1 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 1.361e-194 621.0
CMS1_k127_1392367_2 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 393.0
CMS1_k127_1392367_3 fumarate reductase, iron-sulfur protein K00245 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 302.0
CMS1_k127_1392367_4 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000003897 229.0
CMS1_k127_1392367_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000002537 218.0
CMS1_k127_1392367_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000007997 168.0
CMS1_k127_1392367_7 Domain of unknown function (DUF309) - - - 0.0000000000000000000000000001383 121.0
CMS1_k127_1392367_8 mechanosensitive ion channel K03442 - - 0.0000000000000000000002716 100.0
CMS1_k127_1398739_0 hydrogenase (NiFe) small subunit HydA K05927 - 1.12.5.1 2.033e-318 985.0
CMS1_k127_1398739_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922 - 1.12.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 473.0
CMS1_k127_1404013_0 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 439.0
CMS1_k127_1404013_1 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 396.0
CMS1_k127_1404013_10 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000003008 223.0
CMS1_k127_1404013_11 Rhodanese-like domain - - - 0.0000000000000000000000002566 109.0
CMS1_k127_1404013_12 - - - - 0.000000000000000000000006 108.0
CMS1_k127_1404013_13 PEGA domain - - - 0.00000008801 64.0
CMS1_k127_1404013_2 a g-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 386.0
CMS1_k127_1404013_3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 397.0
CMS1_k127_1404013_4 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 371.0
CMS1_k127_1404013_5 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K18284 - 3.2.2.30,3.2.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 339.0
CMS1_k127_1404013_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 319.0
CMS1_k127_1404013_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 298.0
CMS1_k127_1404013_8 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 285.0
CMS1_k127_1404013_9 sodium:proton antiporter activity K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001444 290.0
CMS1_k127_141241_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 3.052e-206 644.0
CMS1_k127_141241_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 519.0
CMS1_k127_141241_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 414.0
CMS1_k127_141241_3 polysaccharide export protein KPSC K07266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 400.0
CMS1_k127_141241_4 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 319.0
CMS1_k127_141241_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 302.0
CMS1_k127_141241_6 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000001644 161.0
CMS1_k127_141241_7 Glycosyl transferase, family 2 K12990 - - 0.0000000000000000000000000000000000000001479 160.0
CMS1_k127_1433343_0 threonine synthase K01733 - 4.2.3.1 3.939e-245 764.0
CMS1_k127_1433343_1 Belongs to the DegT DnrJ EryC1 family K15895 - 2.6.1.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 535.0
CMS1_k127_1433343_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 441.0
CMS1_k127_1433343_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 416.0
CMS1_k127_1433343_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 355.0
CMS1_k127_1433343_5 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000182 234.0
CMS1_k127_1433343_6 Bacterial transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000002344 199.0
CMS1_k127_1433343_7 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000005107 116.0
CMS1_k127_1433343_8 polyphosphate kinase K22468 - 2.7.4.1 0.00000000000000000000000006052 109.0
CMS1_k127_148704_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.678e-210 654.0
CMS1_k127_148704_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 601.0
CMS1_k127_148704_2 Jag_N K06346 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 327.0
CMS1_k127_148704_3 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001645 279.0
CMS1_k127_148704_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004481 246.0
CMS1_k127_148704_5 DNA processing protein K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000009961 228.0
CMS1_k127_148704_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000004068 197.0
CMS1_k127_148704_7 protein conserved in bacteria K09928 - - 0.00000000000000000000000000000000008925 139.0
CMS1_k127_1535625_0 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 389.0
CMS1_k127_1535625_1 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 384.0
CMS1_k127_1535625_2 General glycosylation pathway protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 386.0
CMS1_k127_1535625_3 lipopolysaccharide heptosyltransferase K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 381.0
CMS1_k127_1535625_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 342.0
CMS1_k127_1535625_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
CMS1_k127_1535625_6 CBS-domain-containing membrane protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000006829 233.0
CMS1_k127_1535625_7 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000001509 228.0
CMS1_k127_1535722_0 Histidine kinase - - - 1.033e-201 641.0
CMS1_k127_1535722_1 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 446.0
CMS1_k127_1535722_2 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 387.0
CMS1_k127_1535722_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 342.0
CMS1_k127_1535722_4 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003096 246.0
CMS1_k127_1564500_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 483.0
CMS1_k127_1564500_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 303.0
CMS1_k127_1564500_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002099 256.0
CMS1_k127_1574046_0 Mur ligase middle domain K01929 - 6.3.2.10 2.162e-204 645.0
CMS1_k127_1574046_1 TRAP transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 602.0
CMS1_k127_1574046_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 323.0
CMS1_k127_1574046_3 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000001241 208.0
CMS1_k127_1574046_4 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.0000000000000000000000000000000000000000000000000000002937 198.0
CMS1_k127_1574046_5 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000003749 168.0
CMS1_k127_1574046_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000001988 103.0
CMS1_k127_1574046_7 Belongs to the ompA family K03286 - - 0.0000000000000000002767 99.0
CMS1_k127_1612189_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.224e-315 972.0
CMS1_k127_1612189_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 4.091e-206 648.0
CMS1_k127_1612189_2 Chorismate mutase prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 559.0
CMS1_k127_1612189_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 547.0
CMS1_k127_1612189_4 permease K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 356.0
CMS1_k127_1612189_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006516 278.0
CMS1_k127_1612189_6 Fibronectin type 3 domain - - - 0.000004208 59.0
CMS1_k127_1612189_7 Zinc metalloprotease (Elastase) K20274 - - 0.000005557 59.0
CMS1_k127_1612189_8 flagellar motor switch protein FliG K02410 - - 0.000129 53.0
CMS1_k127_1623304_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1083.0
CMS1_k127_1623304_1 molybdopterin oxidoreductase - - - 1.616e-230 727.0
CMS1_k127_1623304_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 571.0
CMS1_k127_1623304_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000881 254.0
CMS1_k127_1623304_4 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000005783 146.0
CMS1_k127_1623304_5 Outer membrane efflux protein - - - 0.00000000000000004331 86.0
CMS1_k127_164305_0 Type I secretion system ATPase K11004 - - 0.0 1073.0
CMS1_k127_164305_1 membrane-fusion protein K11003 - - 1.52e-225 704.0
CMS1_k127_1663159_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1024.0
CMS1_k127_1663159_1 penicillin-binding protein K05515 - 3.4.16.4 8.691e-252 789.0
CMS1_k127_1663159_10 hydrolase, TatD K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 380.0
CMS1_k127_1663159_11 Imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 299.0
CMS1_k127_1663159_12 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 296.0
CMS1_k127_1663159_13 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 287.0
CMS1_k127_1663159_14 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008313 280.0
CMS1_k127_1663159_15 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000268 272.0
CMS1_k127_1663159_16 acetyltransferase K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000006642 223.0
CMS1_k127_1663159_17 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000006592 194.0
CMS1_k127_1663159_18 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000007195 183.0
CMS1_k127_1663159_19 Lipopolysaccharide transport periplasmic protein lpta K09774 - - 0.00000000000000000000000000000000000000000002357 166.0
CMS1_k127_1663159_2 PFAM Acyl-CoA dehydrogenase, C-terminal domain K06445 - - 4.981e-246 782.0
CMS1_k127_1663159_23 Cytochrome c - - - 0.000000000000935 71.0
CMS1_k127_1663159_3 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 6.009e-206 663.0
CMS1_k127_1663159_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 527.0
CMS1_k127_1663159_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 524.0
CMS1_k127_1663159_6 K -dependent Na Ca exchanger K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 444.0
CMS1_k127_1663159_7 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 426.0
CMS1_k127_1663159_8 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 440.0
CMS1_k127_1663159_9 lytic murein transglycosylase K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 411.0
CMS1_k127_1714069_0 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 363.0
CMS1_k127_1714069_1 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 363.0
CMS1_k127_1714069_2 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 342.0
CMS1_k127_1714069_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003619 295.0
CMS1_k127_1714069_4 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000000000000000000002661 217.0
CMS1_k127_1714069_5 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000003399 149.0
CMS1_k127_1714069_6 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000005344 149.0
CMS1_k127_1714069_7 Protein of unknown function, DUF255 - - - 0.0000000000000000000001829 101.0
CMS1_k127_1714069_8 endonuclease containing a URI domain K07461 - - 0.00000000000000000385 99.0
CMS1_k127_1761823_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 619.0
CMS1_k127_1761823_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 312.0
CMS1_k127_1765518_0 Atp-dependent helicase K03579 - 3.6.4.13 2.96e-277 875.0
CMS1_k127_1765518_1 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 434.0
CMS1_k127_1765518_10 Belongs to the UPF0763 family - - - 0.00000000000000000000000000000000000000000000000000005293 190.0
CMS1_k127_1765518_11 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000001413 180.0
CMS1_k127_1765518_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000000001074 157.0
CMS1_k127_1765518_14 - - - - 0.0000000000000000000000000000000001198 135.0
CMS1_k127_1765518_15 spectrin binding K15502,K19947 - 1.14.13.225 0.0000000000000000000000000000000002119 148.0
CMS1_k127_1765518_17 - - - - 0.0000000000000009281 83.0
CMS1_k127_1765518_18 Histidine kinase - - - 0.0000000000002684 82.0
CMS1_k127_1765518_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 370.0
CMS1_k127_1765518_3 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 370.0
CMS1_k127_1765518_4 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 373.0
CMS1_k127_1765518_5 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 353.0
CMS1_k127_1765518_6 Phospholipase/Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 322.0
CMS1_k127_1765518_7 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 313.0
CMS1_k127_1765518_8 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000000000007969 226.0
CMS1_k127_1765518_9 SprT-like family - - - 0.0000000000000000000000000000000000000000000000000000000000006848 213.0
CMS1_k127_1792056_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1082.0
CMS1_k127_1792056_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001305 277.0
CMS1_k127_1796743_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 560.0
CMS1_k127_1799082_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 5.481e-218 683.0
CMS1_k127_1799082_1 3-deoxy-d-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 495.0
CMS1_k127_1799082_2 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 357.0
CMS1_k127_1799082_3 COG1579 Zn-ribbon protein possibly nucleic acid-binding K07164,K22391 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 320.0
CMS1_k127_1799082_4 Belongs to the pseudouridine synthase RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 319.0
CMS1_k127_1799082_5 dinuclear metal center protein, YbgI K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 315.0
CMS1_k127_1799082_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000000000004083 156.0
CMS1_k127_1799082_7 Histidine kinase K07648,K07679 - 2.7.13.3 0.0000000000000000000000000000000000064 152.0
CMS1_k127_1799082_8 Tetratricopeptide repeat - - - 0.000000000000000000000001984 107.0
CMS1_k127_1799082_9 RNA-binding protein K06960 - - 0.000000001966 58.0
CMS1_k127_181516_0 ATP-dependent CLP protease ATP-binding subunit K03694 - - 2.755e-280 879.0
CMS1_k127_181516_1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal - - - 5.092e-195 613.0
CMS1_k127_181516_10 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 307.0
CMS1_k127_181516_11 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 302.0
CMS1_k127_181516_12 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000004058 224.0
CMS1_k127_181516_13 Dialkylrecorsinol condensing enzyme DarA - - - 0.00000000000000000000000000000000000000000000000000000000503 210.0
CMS1_k127_181516_14 beta-ketoacyl-acyl-carrier-protein synthase II activity - - - 0.00000000000000000000000000000000000000000000000000004958 197.0
CMS1_k127_181516_15 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000002845 179.0
CMS1_k127_181516_16 - - - - 0.000000000000000000000000000000000000002444 151.0
CMS1_k127_181516_17 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000001638 146.0
CMS1_k127_181516_18 Lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000003627 152.0
CMS1_k127_181516_19 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000000001115 125.0
CMS1_k127_181516_2 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 605.0
CMS1_k127_181516_20 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000003116 110.0
CMS1_k127_181516_21 Phosphopantetheine attachment site K02078 - - 0.00000000000000005251 85.0
CMS1_k127_181516_22 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372 - 4.2.1.59 0.0000000000000009024 81.0
CMS1_k127_181516_23 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.00000000000005072 72.0
CMS1_k127_181516_24 - - - - 0.000004342 55.0
CMS1_k127_181516_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 527.0
CMS1_k127_181516_4 Butirosin biosynthesis protein H, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 471.0
CMS1_k127_181516_5 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 461.0
CMS1_k127_181516_6 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 444.0
CMS1_k127_181516_7 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 416.0
CMS1_k127_181516_8 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 405.0
CMS1_k127_181516_9 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 362.0
CMS1_k127_1835297_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.237e-229 714.0
CMS1_k127_1835297_1 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000000000000007131 221.0
CMS1_k127_1854128_0 Phospholipid glycerol acyltransferase - - - 7.697e-235 739.0
CMS1_k127_1854128_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 591.0
CMS1_k127_1854128_10 - - - - 0.0000000000000000000008502 97.0
CMS1_k127_1854128_11 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000504 85.0
CMS1_k127_1854128_12 - - - - 0.000000000001478 69.0
CMS1_k127_1854128_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 448.0
CMS1_k127_1854128_3 COG0642 Signal transduction histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 426.0
CMS1_k127_1854128_4 Belongs to the pseudouridine synthase RluA family K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 400.0
CMS1_k127_1854128_5 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 355.0
CMS1_k127_1854128_6 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 350.0
CMS1_k127_1854128_7 phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 308.0
CMS1_k127_1854128_9 - - - - 0.0000000000000000000000000004123 115.0
CMS1_k127_1872713_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 6.869e-270 837.0
CMS1_k127_1872713_1 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006066 236.0
CMS1_k127_1872713_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000005169 166.0
CMS1_k127_1872713_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000008514 98.0
CMS1_k127_1872713_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000001971 82.0
CMS1_k127_1876492_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 468.0
CMS1_k127_1876492_1 - - - - 0.0000000000000002856 85.0
CMS1_k127_1876492_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000001873 58.0
CMS1_k127_188185_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.435e-277 872.0
CMS1_k127_188185_1 HypF finger - - - 2.155e-265 834.0
CMS1_k127_188185_2 Sulfite reductase beta subunit (hemoprotein) K00392 - 1.8.7.1 1.456e-229 724.0
CMS1_k127_188185_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 358.0
CMS1_k127_188185_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 292.0
CMS1_k127_188185_5 hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000000000000000000000000000000003496 226.0
CMS1_k127_188185_6 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000000003028 130.0
CMS1_k127_188185_7 Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.0000000000000000001229 88.0
CMS1_k127_188185_8 - - - - 0.0000000000005289 74.0
CMS1_k127_1904002_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 9.462e-246 761.0
CMS1_k127_1904002_1 Belongs to the CarA family K01956 - 6.3.5.5 5.93e-197 619.0
CMS1_k127_1904002_10 Reverse transcriptase - - - 0.00000000000000000000000000000000000000000000000000000000001103 227.0
CMS1_k127_1904002_11 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000007719 187.0
CMS1_k127_1904002_12 SMART Rhodanese domain protein - - - 0.000000000000000000000000000006951 124.0
CMS1_k127_1904002_13 Rubredoxin - - - 0.00000000000000000000000001936 108.0
CMS1_k127_1904002_14 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.0000002042 64.0
CMS1_k127_1904002_2 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 577.0
CMS1_k127_1904002_3 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 559.0
CMS1_k127_1904002_4 PFAM tRNA synthetase class II (G H P and S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 399.0
CMS1_k127_1904002_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007197 391.0
CMS1_k127_1904002_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 288.0
CMS1_k127_1904002_7 protein conserved in bacteria K09804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006678 278.0
CMS1_k127_1904002_8 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000004985 216.0
CMS1_k127_1904002_9 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000000023 226.0
CMS1_k127_1944032_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 6.795e-297 924.0
CMS1_k127_1944032_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 502.0
CMS1_k127_1944032_10 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000116 116.0
CMS1_k127_1944032_2 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 398.0
CMS1_k127_1944032_3 COGs COG0665 Glycine D-amino acid oxidase (deaminating) K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 392.0
CMS1_k127_1944032_4 NUDIX domain K16855 - 3.6.1.62,3.6.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
CMS1_k127_1944032_5 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 289.0
CMS1_k127_1944032_6 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000008426 254.0
CMS1_k127_1944032_7 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000001045 245.0
CMS1_k127_1944032_8 - - - - 0.000000000000000000000000000000000000000000000000000000000001607 220.0
CMS1_k127_1944032_9 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000756 170.0
CMS1_k127_1974499_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1066.0
CMS1_k127_1974499_1 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 402.0
CMS1_k127_2011970_0 ribosomal protein S1 K02945 - - 8.296e-272 845.0
CMS1_k127_2011970_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 8.147e-225 711.0
CMS1_k127_2011970_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 7.528e-205 645.0
CMS1_k127_2011970_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 420.0
CMS1_k127_2076483_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2396.0
CMS1_k127_2076483_1 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 5.1e-259 802.0
CMS1_k127_2076483_10 protein involved in response to NO K07234 - - 0.0000000000000000000000000002232 118.0
CMS1_k127_2076483_11 - - - - 0.0000000000000000003518 93.0
CMS1_k127_2076483_12 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000002345 56.0
CMS1_k127_2076483_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 488.0
CMS1_k127_2076483_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 461.0
CMS1_k127_2076483_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 319.0
CMS1_k127_2076483_5 RecO N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 313.0
CMS1_k127_2076483_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000001455 233.0
CMS1_k127_2076483_7 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000001739 220.0
CMS1_k127_2076483_8 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000006264 218.0
CMS1_k127_2076483_9 DnaK suppressor protein K06204 - - 0.00000000000000000000000000000000000000005799 153.0
CMS1_k127_207944_0 Type I secretion system ATPase K12541 - - 8.699e-260 819.0
CMS1_k127_207944_1 outer membrane protein, TolC family K12543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 553.0
CMS1_k127_207944_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 495.0
CMS1_k127_207944_3 Dtw domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 284.0
CMS1_k127_207944_4 type I secretion membrane fusion protein, HlyD family K02022,K12542 - - 0.00000000000000000000000000000000000000000000000000000000003889 211.0
CMS1_k127_207944_6 Sel1-like repeats. - - - 0.00000000000000000004786 96.0
CMS1_k127_207944_9 - - - - 0.000002008 57.0
CMS1_k127_2087339_0 EamA-like transporter family K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 312.0
CMS1_k127_2087339_1 - - - - 0.00000000000000000000000000000000000000000000005893 187.0
CMS1_k127_2105769_0 Uncharacterised conserved protein (DUF2156) K01163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 581.0
CMS1_k127_2105769_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 295.0
CMS1_k127_2105769_2 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000000000000005032 156.0
CMS1_k127_2105769_3 COG0433 Predicted ATPase - - - 0.00000000000000000000000000000000000002777 145.0
CMS1_k127_2105769_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.00000000000000000000000000000000000002834 147.0
CMS1_k127_2105769_5 Cold-shock protein K03704 - - 0.00000000000000000000000000000000004778 136.0
CMS1_k127_2105769_6 - - - - 0.00000000000000000005697 91.0
CMS1_k127_2111405_0 Mg chelatase-related protein K07391 - - 3.359e-210 663.0
CMS1_k127_2111405_1 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009798 327.0
CMS1_k127_2111405_2 Ferritin K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 284.0
CMS1_k127_2111405_3 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000003044 204.0
CMS1_k127_2111405_4 Psort location Cytoplasmic, score 8.96 K03969 - - 0.0000000000000000000000000000000000000000000000002771 183.0
CMS1_k127_2122213_0 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00366,K00392 - 1.7.7.1,1.8.7.1 3.825e-252 794.0
CMS1_k127_2122213_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 397.0
CMS1_k127_2122213_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02303,K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 386.0
CMS1_k127_2122213_3 Glycosyl transferase family, helical bundle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 382.0
CMS1_k127_2122213_4 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000003213 106.0
CMS1_k127_2134545_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1006.0
CMS1_k127_2134545_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 473.0
CMS1_k127_2134545_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006693 432.0
CMS1_k127_2134545_3 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 348.0
CMS1_k127_2134545_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 325.0
CMS1_k127_2134545_5 abc transporter atp-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 289.0
CMS1_k127_2134545_6 RESPONSE REGULATOR receiver K07288 - - 0.000000000000000000005323 104.0
CMS1_k127_2137886_0 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 292.0
CMS1_k127_2137886_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003806 216.0
CMS1_k127_2137886_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000001972 117.0
CMS1_k127_2137886_3 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000003593 64.0
CMS1_k127_2141011_0 Hydrogenase, large subunit K06281 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 383.0
CMS1_k127_2141011_1 Small subunit K05927 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.12.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 308.0
CMS1_k127_2141011_2 PFAM NADH ubiquinone oxidoreductase, 20 Kd subunit K06282 - 1.12.99.6 0.00000000006121 64.0
CMS1_k127_2144217_0 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000156 244.0
CMS1_k127_2144217_1 Protein conserved in bacteria - - - 0.000000000000000174 94.0
CMS1_k127_2144217_2 - - - - 0.0000000003181 69.0
CMS1_k127_2155225_0 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 399.0
CMS1_k127_2155225_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 301.0
CMS1_k127_2155225_2 glycosyl transferase K13007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002361 275.0
CMS1_k127_2155225_3 Oligosaccharide transferase K07151 - 2.4.99.18 0.00000000000000002986 82.0
CMS1_k127_2187627_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.047e-255 791.0
CMS1_k127_2187627_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 593.0
CMS1_k127_2187627_2 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.0000000000000000000001629 97.0
CMS1_k127_2225250_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 488.0
CMS1_k127_2225250_1 Belongs to the DegT DnrJ EryC1 family K13017 - 2.6.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 295.0
CMS1_k127_2225250_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000006599 146.0
CMS1_k127_2225250_3 cytochrome c class I - - - 0.00000000000000000136 90.0
CMS1_k127_2225250_4 cytochrome c class I - - - 0.0000000002353 61.0
CMS1_k127_2237163_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 7.066e-255 790.0
CMS1_k127_2237163_1 Protein of unknown function (DUF1566) - - - 0.000000000155 67.0
CMS1_k127_2260137_0 Belongs to the GARS family K01945 - 6.3.4.13 1.72e-229 715.0
CMS1_k127_2260137_1 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000002412 189.0
CMS1_k127_2260137_2 RDD family - - - 0.000000000000000000000000000000000000000001315 160.0
CMS1_k127_227305_0 ATPase (AAA - - - 1.317e-269 839.0
CMS1_k127_227305_1 Circularly permuted ATP-grasp type 2 - - - 1.561e-242 755.0
CMS1_k127_227305_10 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000009861 182.0
CMS1_k127_227305_11 - - - - 0.000000000000000000000000000000000000000001461 161.0
CMS1_k127_227305_12 Bacterial transglutaminase-like N-terminal region - - - 0.000000000000000000000000000000003341 128.0
CMS1_k127_227305_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.165e-218 689.0
CMS1_k127_227305_3 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 580.0
CMS1_k127_227305_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 490.0
CMS1_k127_227305_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 425.0
CMS1_k127_227305_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 331.0
CMS1_k127_227305_7 Long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 338.0
CMS1_k127_227305_8 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 317.0
CMS1_k127_227305_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 295.0
CMS1_k127_2275523_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 467.0
CMS1_k127_2275523_1 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 362.0
CMS1_k127_2275523_2 Chemoreceptor zinc-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004827 236.0
CMS1_k127_2275523_3 Protein of unknown function (DUF2798) - - - 0.00000000000000003238 84.0
CMS1_k127_2346029_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.559e-228 712.0
CMS1_k127_2346029_1 sulfur dehydrogenase subunit K17225 - - 3.671e-224 702.0
CMS1_k127_2346029_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000001129 184.0
CMS1_k127_2346029_12 MOSC domain - - - 0.0000000000000000000000000000000000000000002729 163.0
CMS1_k127_2346029_13 Putative transmembrane protein (PGPGW) - - - 0.00000000000000000000000000000000000006826 147.0
CMS1_k127_2346029_14 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000002243 140.0
CMS1_k127_2346029_15 Belongs to the UPF0250 family - - - 0.0000000000000000000000000001425 117.0
CMS1_k127_2346029_16 Major facilitator superfamily - - - 0.00000000000000000000000006554 114.0
CMS1_k127_2346029_17 Thioredoxin-like domain - - - 0.000000000000000000000006484 107.0
CMS1_k127_2346029_2 Cytochrome c K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 410.0
CMS1_k127_2346029_3 General glycosylation pathway protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 304.0
CMS1_k127_2346029_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 300.0
CMS1_k127_2346029_5 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 295.0
CMS1_k127_2346029_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 285.0
CMS1_k127_2346029_7 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003884 278.0
CMS1_k127_2346029_8 Uncharacterised protein family (UPF0014) K02069 - - 0.00000000000000000000000000000000000000000000000000000000000000000001693 239.0
CMS1_k127_2346029_9 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000009965 229.0
CMS1_k127_2354481_0 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 443.0
CMS1_k127_2354481_1 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 346.0
CMS1_k127_2354481_2 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000004643 193.0
CMS1_k127_2381233_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 2.313e-222 694.0
CMS1_k127_2381233_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 445.0
CMS1_k127_2381233_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 394.0
CMS1_k127_2381233_3 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000009043 227.0
CMS1_k127_2480572_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.0 1336.0
CMS1_k127_2480572_1 MgtC family - - - 0.00000000000000000000000000000000000000000000000000000000000000005575 235.0
CMS1_k127_2480572_2 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000002083 192.0
CMS1_k127_2492994_0 HDOD domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 5.206e-203 639.0
CMS1_k127_2492994_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 504.0
CMS1_k127_2492994_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000001106 106.0
CMS1_k127_2492994_3 - - - - 0.000000001068 64.0
CMS1_k127_2533625_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 4.378e-315 981.0
CMS1_k127_2533625_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.836e-273 848.0
CMS1_k127_2533625_10 lipoprotein - - - 0.000000000000000000000000004581 112.0
CMS1_k127_2533625_11 - - - - 0.00000000000000000002267 94.0
CMS1_k127_2533625_12 EF-hand, calcium binding motif - - - 0.0000003951 59.0
CMS1_k127_2533625_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.424e-261 813.0
CMS1_k127_2533625_3 COG0841 Cation multidrug efflux pump - - - 9.097e-261 814.0
CMS1_k127_2533625_4 HD domain - - - 1.837e-223 717.0
CMS1_k127_2533625_5 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 447.0
CMS1_k127_2533625_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 324.0
CMS1_k127_2533625_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 323.0
CMS1_k127_2533625_8 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000001684 263.0
CMS1_k127_2533625_9 Radical SAM - - - 0.000000000000000000000000000000000000000000009277 166.0
CMS1_k127_2541228_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 594.0
CMS1_k127_2541228_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 381.0
CMS1_k127_2541228_2 COGs COG4087 Soluble P-type ATPase - - - 0.00000000000000000000000000000000000000000000000001409 184.0
CMS1_k127_2541228_3 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000007043 57.0
CMS1_k127_2541816_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.066e-235 735.0
CMS1_k127_2541816_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 3.503e-199 627.0
CMS1_k127_2541816_2 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 535.0
CMS1_k127_2541816_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 310.0
CMS1_k127_2541816_4 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000718 153.0
CMS1_k127_2541816_5 - - - - 0.0000000000000000000000001022 110.0
CMS1_k127_2541816_6 Sel1-like repeats. K07126 - - 0.00000000003141 76.0
CMS1_k127_2541816_7 Sel1 repeat protein - - - 0.00000001189 68.0
CMS1_k127_2541816_8 ERAD pathway - - - 0.000002226 59.0
CMS1_k127_255684_0 Enoyl-CoA hydratase/isomerase K19640 - - 8.433e-205 651.0
CMS1_k127_255684_1 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 528.0
CMS1_k127_255684_2 Family of unknown function (DUF695) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 313.0
CMS1_k127_255684_3 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002842 261.0
CMS1_k127_255684_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000000000000000000000000000000000000000005075 177.0
CMS1_k127_2563212_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1227.0
CMS1_k127_2563212_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 5.723e-283 872.0
CMS1_k127_2563212_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 570.0
CMS1_k127_2563212_3 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 469.0
CMS1_k127_2563212_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 344.0
CMS1_k127_2575945_0 Cysteine desulfurase K04487 - 2.8.1.7 1.278e-216 677.0
CMS1_k127_2575945_1 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000101 162.0
CMS1_k127_2575945_2 metallopeptidase activity K01218,K13276 - 3.2.1.78 0.000000000001157 80.0
CMS1_k127_2582623_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 535.0
CMS1_k127_2582623_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 536.0
CMS1_k127_2582623_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 484.0
CMS1_k127_2582623_3 component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 371.0
CMS1_k127_2582623_4 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 353.0
CMS1_k127_2582623_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.00000000000000000000000000000000000000000000001316 175.0
CMS1_k127_2582623_6 (HIT) family - - - 0.0000000000000000000000000000000000000000000000166 173.0
CMS1_k127_2586118_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 449.0
CMS1_k127_2586118_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 351.0
CMS1_k127_2586118_2 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 325.0
CMS1_k127_2586118_3 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 261.0
CMS1_k127_2586118_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001776 251.0
CMS1_k127_2586118_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000002652 200.0
CMS1_k127_2586118_6 Histidine kinase K07645 - 2.7.13.3 0.000000000000000000000000000000000000000007361 169.0
CMS1_k127_25923_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1094.0
CMS1_k127_25923_1 Histidine kinase K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 451.0
CMS1_k127_25923_10 - - - - 0.000000000000000005158 88.0
CMS1_k127_25923_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 389.0
CMS1_k127_25923_3 response regulator K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 363.0
CMS1_k127_25923_4 involved in molybdopterin and thiamine biosynthesis family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 305.0
CMS1_k127_25923_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000001446 231.0
CMS1_k127_25923_6 PFAM NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000004743 243.0
CMS1_k127_25923_7 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000006721 207.0
CMS1_k127_25923_8 GDSL-like lipase acylhydrolase - - - 0.0000000000000000000004104 102.0
CMS1_k127_25923_9 iron ion homeostasis K04758 - - 0.00000000000000000009646 90.0
CMS1_k127_2619079_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 7.063e-257 795.0
CMS1_k127_2619079_1 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 1.632e-194 611.0
CMS1_k127_2619079_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 597.0
CMS1_k127_2619079_3 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 491.0
CMS1_k127_2619079_4 GDP-mannose 4,6 dehydratase K12453 - 1.1.1.342 0.000000000000000000000000000000000000000000000000001556 186.0
CMS1_k127_2651426_0 RNase H K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 339.0
CMS1_k127_2651426_1 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 309.0
CMS1_k127_2651426_2 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000000000000000001554 196.0
CMS1_k127_2651426_3 HD domain - - - 0.0000000000000000000000000000000000000001718 158.0
CMS1_k127_2651426_4 - - - - 0.0000000000000000000001007 101.0
CMS1_k127_2651426_5 acetyltransferase K06975 - - 0.00000000000000000001275 94.0
CMS1_k127_2651426_6 PepSY-associated TM region - - - 0.00000000000000000388 92.0
CMS1_k127_2655904_0 Efflux pump membrane transporter K03296,K18138 - - 0.0 1400.0
CMS1_k127_2655904_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 7.843e-316 975.0
CMS1_k127_2655904_10 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 406.0
CMS1_k127_2655904_11 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
CMS1_k127_2655904_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 315.0
CMS1_k127_2655904_13 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 323.0
CMS1_k127_2655904_14 phage repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 309.0
CMS1_k127_2655904_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 290.0
CMS1_k127_2655904_16 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 280.0
CMS1_k127_2655904_17 ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003982 276.0
CMS1_k127_2655904_18 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000006565 256.0
CMS1_k127_2655904_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001028 252.0
CMS1_k127_2655904_2 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 9.768e-217 678.0
CMS1_k127_2655904_20 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000008721 205.0
CMS1_k127_2655904_21 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000000000000000000000000000000000004438 142.0
CMS1_k127_2655904_22 - - - - 0.0000000000000000000000000000005864 129.0
CMS1_k127_2655904_23 Cytochrome c - - - 0.00000000000000000000000000854 124.0
CMS1_k127_2655904_24 Ankyrin repeat - - - 0.000000000004243 68.0
CMS1_k127_2655904_3 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 2.461e-209 656.0
CMS1_k127_2655904_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 2.85e-209 653.0
CMS1_k127_2655904_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 478.0
CMS1_k127_2655904_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 467.0
CMS1_k127_2655904_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 468.0
CMS1_k127_2655904_8 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 444.0
CMS1_k127_2655904_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 427.0
CMS1_k127_2669708_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 1.72e-214 672.0
CMS1_k127_2669708_1 surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000001032 236.0
CMS1_k127_2669708_2 SpoIIAA-like - - - 0.000000000000000000000000000000000000001507 151.0
CMS1_k127_2731512_0 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 563.0
CMS1_k127_2731512_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 448.0
CMS1_k127_2731512_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000902 430.0
CMS1_k127_2731512_3 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006575 252.0
CMS1_k127_2731512_4 beta-lactamase - - - 0.000000000000000000000000000000000000002386 161.0
CMS1_k127_2731512_5 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000001711 66.0
CMS1_k127_2731512_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000007552 59.0
CMS1_k127_2745552_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 589.0
CMS1_k127_2745552_1 ABC transporter, ATP-binding protein K01990,K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 397.0
CMS1_k127_2745552_2 tigr02757 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 300.0
CMS1_k127_2745552_3 CoA-binding protein K06929 - - 0.00000000000000000000000000000000000000000000000000000000000000335 221.0
CMS1_k127_2745552_4 Ppx GppA K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000006932 166.0
CMS1_k127_2745552_5 ATPase or kinase K06925 - - 0.0000000000000000000000000000000000001316 144.0
CMS1_k127_2757063_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.652e-232 722.0
CMS1_k127_2757063_1 ubiquinol cytochrome c oxidoreductase, cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007502 452.0
CMS1_k127_2757063_2 surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 461.0
CMS1_k127_2757063_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 361.0
CMS1_k127_2757063_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003233 250.0
CMS1_k127_2757063_5 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K01420 - - 0.000000000000000000000000000000000000000000000004377 180.0
CMS1_k127_2757063_6 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.00000000000000000000000000004967 132.0
CMS1_k127_2757063_7 cytochrome K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000313 99.0
CMS1_k127_2757063_8 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.0000000000000000003111 88.0
CMS1_k127_2759097_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 569.0
CMS1_k127_2759097_1 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 430.0
CMS1_k127_2759097_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001477 268.0
CMS1_k127_2759097_3 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004312 243.0
CMS1_k127_2759097_4 Hit family K02503 - - 0.00000000000000000000000000000000000000000000000000002133 190.0
CMS1_k127_2761609_0 Sulfatase-modifying factor enzyme 1 - - - 2.521e-297 927.0
CMS1_k127_2761609_1 Belongs to the DEAD box helicase family K05592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.6.4.13 3.268e-231 728.0
CMS1_k127_2761609_2 Cache domain K02480,K03406 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 522.0
CMS1_k127_2761609_3 Aminotransferase, class I K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 475.0
CMS1_k127_2761609_4 DNA recombination protein K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 469.0
CMS1_k127_2761609_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 325.0
CMS1_k127_2761609_6 PFAM dUTPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 301.0
CMS1_k127_2761609_7 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000001495 199.0
CMS1_k127_2761609_8 cofactor binding K09979 - - 0.00000000000000000000000000000000000000001206 157.0
CMS1_k127_2763659_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 6.392e-215 672.0
CMS1_k127_2763659_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 588.0
CMS1_k127_2763659_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000003593 169.0
CMS1_k127_2763659_11 Uncharacterized protein domain (DUF2202) - - - 0.000000000000000000000000000000000000000003746 164.0
CMS1_k127_2763659_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000283 118.0
CMS1_k127_2763659_13 Ankyrin repeat K15502,K15503,K15504 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016050,GO:0016192,GO:0022607,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0065003,GO:0070013,GO:0071840,GO:0090114 - 0.000000000000000000000003202 110.0
CMS1_k127_2763659_2 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 433.0
CMS1_k127_2763659_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 365.0
CMS1_k127_2763659_4 Belongs to the ClpA ClpB family K03694,K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 296.0
CMS1_k127_2763659_5 ABC transporter, ATP-binding protein K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005868 256.0
CMS1_k127_2763659_6 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003232 252.0
CMS1_k127_2763659_7 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000006986 255.0
CMS1_k127_2763659_8 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008417 232.0
CMS1_k127_2763659_9 Uncharacterised protein family (UPF0227) - - - 0.00000000000000000000000000000000000000000000000000008089 191.0
CMS1_k127_2781339_0 7TMR-DISM extracellular 2 - - - 0.00000000000000000000000000000000000000000000008394 190.0
CMS1_k127_2781339_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000006431 139.0
CMS1_k127_2781339_2 protein conserved in bacteria K09928 - - 0.0000000000000000000000000002056 120.0
CMS1_k127_2807501_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 431.0
CMS1_k127_2807501_1 membrane K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 429.0
CMS1_k127_2807501_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 376.0
CMS1_k127_2807501_3 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 322.0
CMS1_k127_2807501_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 295.0
CMS1_k127_2807501_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000009041 229.0
CMS1_k127_2807501_6 DnaJ domain protein K05801 - - 0.0000000000000000000000000000000000000000000000000000000000003953 219.0
CMS1_k127_2807501_7 Glutaredoxin - - - 0.000000002255 68.0
CMS1_k127_2811458_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1095.0
CMS1_k127_2811458_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.126e-302 937.0
CMS1_k127_2811458_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 606.0
CMS1_k127_2811458_3 Anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 332.0
CMS1_k127_2811458_4 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 339.0
CMS1_k127_2811458_5 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 303.0
CMS1_k127_2811458_6 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000000000000000000000000000000000000000000000000000002306 243.0
CMS1_k127_2811458_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000005796 107.0
CMS1_k127_2827218_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 8.068e-273 844.0
CMS1_k127_2827218_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 7.886e-253 784.0
CMS1_k127_2827218_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 497.0
CMS1_k127_2827218_11 Archaea bacterial proteins of unknown function K06921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 439.0
CMS1_k127_2827218_12 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 428.0
CMS1_k127_2827218_13 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 421.0
CMS1_k127_2827218_14 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008113 420.0
CMS1_k127_2827218_15 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 373.0
CMS1_k127_2827218_16 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 364.0
CMS1_k127_2827218_17 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 331.0
CMS1_k127_2827218_18 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000000000000000000000000001433 236.0
CMS1_k127_2827218_19 Belongs to the Fur family K03711 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000001033 233.0
CMS1_k127_2827218_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 3.117e-248 768.0
CMS1_k127_2827218_20 Aldose 1-epimerase K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000001271 211.0
CMS1_k127_2827218_21 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000001373 180.0
CMS1_k127_2827218_22 Domain of unknown function (DUF1882) - - - 0.000000000000000000000000000000000000000006214 159.0
CMS1_k127_2827218_23 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000002171 153.0
CMS1_k127_2827218_24 Cell division protein K03591,K03749 - - 0.0000000000000000000000000000000000000009014 157.0
CMS1_k127_2827218_25 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000002813 131.0
CMS1_k127_2827218_27 - - - - 0.0000000007165 60.0
CMS1_k127_2827218_28 Protein of unknown function (DUF3293) - - - 0.000007137 53.0
CMS1_k127_2827218_3 anthranilate synthase component K01657 - 4.1.3.27 2.843e-225 705.0
CMS1_k127_2827218_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 2.334e-209 655.0
CMS1_k127_2827218_5 MiaB-like tRNA modifying enzyme - - - 8.616e-194 611.0
CMS1_k127_2827218_6 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 583.0
CMS1_k127_2827218_7 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 583.0
CMS1_k127_2827218_8 domain protein K09944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 536.0
CMS1_k127_2827218_9 Belongs to the AAA ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 537.0
CMS1_k127_282725_0 Belongs to the DNA mismatch repair MutS family K03555 - - 0.0 1498.0
CMS1_k127_282725_1 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 556.0
CMS1_k127_282725_10 signal transduction sensor histidine kinase - - - 0.0000000000000006062 78.0
CMS1_k127_282725_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 535.0
CMS1_k127_282725_3 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 299.0
CMS1_k127_282725_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000191 174.0
CMS1_k127_282725_5 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000002987 169.0
CMS1_k127_282725_6 - - - - 0.0000000000000000000000000000000000000004239 151.0
CMS1_k127_282725_7 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000001574 140.0
CMS1_k127_282725_8 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000009956 94.0
CMS1_k127_282725_9 Protein of unknown function (DUF1566) - - - 0.000000000000000000004351 99.0
CMS1_k127_2858368_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 513.0
CMS1_k127_2858368_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 466.0
CMS1_k127_2858368_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 328.0
CMS1_k127_2858368_3 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
CMS1_k127_2858368_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000008738 266.0
CMS1_k127_2858368_5 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.000000000005376 66.0
CMS1_k127_2881552_0 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 499.0
CMS1_k127_2881552_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004618 226.0
CMS1_k127_2881552_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000008358 217.0
CMS1_k127_2881552_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000003655 209.0
CMS1_k127_2881552_4 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.000000000000000000000000000000000001962 141.0
CMS1_k127_2881552_6 molybdate ion transport K02017,K06857 - 3.6.3.29,3.6.3.55 0.00000000000000000000003728 104.0
CMS1_k127_289075_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1272.0
CMS1_k127_289075_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 8.991e-237 738.0
CMS1_k127_289075_10 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000005584 207.0
CMS1_k127_289075_11 molybdopterin converting factor K03636 - - 0.000000000000000000000000000006703 119.0
CMS1_k127_289075_12 transporter - - - 0.00000000000000001933 83.0
CMS1_k127_289075_2 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 611.0
CMS1_k127_289075_3 molybdopterin biosynthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 501.0
CMS1_k127_289075_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 463.0
CMS1_k127_289075_5 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 335.0
CMS1_k127_289075_6 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001781 256.0
CMS1_k127_289075_7 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000000000000000000000004325 254.0
CMS1_k127_289075_8 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000005765 244.0
CMS1_k127_289075_9 molybdopterin converting factor K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000001126 236.0
CMS1_k127_290661_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1064.0
CMS1_k127_290661_1 PFAM biotin lipoyl attachment domain-containing protein K01960 - 6.4.1.1 0.0 1009.0
CMS1_k127_290661_2 COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit K01572 - 4.1.1.3 1.563e-228 714.0
CMS1_k127_290661_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922 - 1.12.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 374.0
CMS1_k127_290661_4 Universal stress protein family - - - 0.00000000000000000000000000000000000000002487 164.0
CMS1_k127_290661_5 - - - - 0.00000000000000000000000000000000009152 136.0
CMS1_k127_290661_6 PFAM peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000004298 133.0
CMS1_k127_290661_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000001972 117.0
CMS1_k127_290661_8 Histidine kinase K03407 - 2.7.13.3 0.000000000000000000000008862 113.0
CMS1_k127_290661_9 Oxaloacetate decarboxylase, gamma chain K01573 - 4.1.1.3 0.0000000000000001889 81.0
CMS1_k127_2944577_1 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000000000000142 173.0
CMS1_k127_2944577_2 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000003487 168.0
CMS1_k127_2944577_3 - - - - 0.000000000000000000000000001201 114.0
CMS1_k127_2944577_4 Sulfurtransferase - - - 0.0000000003595 61.0
CMS1_k127_2947468_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009854 489.0
CMS1_k127_2947468_1 two-component regulatory system Multi-sensor hybrid histidine kinase - - - 0.0000000000000000000000000000008405 133.0
CMS1_k127_2947468_2 S4 domain protein - - - 0.000000000000000000000000000005269 120.0
CMS1_k127_2953804_0 COG0631 Serine threonine protein phosphatase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 362.0
CMS1_k127_2953804_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 375.0
CMS1_k127_2953804_2 PFAM Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000246 274.0
CMS1_k127_2962827_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 411.0
CMS1_k127_2982720_0 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 315.0
CMS1_k127_2982720_1 COGs COG2829 Outer membrane phospholipase A K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000007781 230.0
CMS1_k127_2982720_2 COG1226 Kef-type K transport systems - - - 0.00000000000000000001508 100.0
CMS1_k127_2990052_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.56e-321 999.0
CMS1_k127_2990052_1 ATP-dependent DNA helicase K03655 - 3.6.4.12 9.698e-231 730.0
CMS1_k127_2990052_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 340.0
CMS1_k127_2990052_3 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000004421 224.0
CMS1_k127_2990052_4 - - - - 0.00000000001106 66.0
CMS1_k127_2990820_0 Fad-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 492.0
CMS1_k127_2990820_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000002483 258.0
CMS1_k127_2992341_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 518.0
CMS1_k127_2992341_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 450.0
CMS1_k127_2992341_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000123 257.0
CMS1_k127_2992341_11 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002403 255.0
CMS1_k127_2992341_12 protein conserved in bacteria K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000001233 226.0
CMS1_k127_2992341_13 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000007341 232.0
CMS1_k127_2992341_14 - - - - 0.0000000000000000000000000000000000000000000000004327 179.0
CMS1_k127_2992341_15 YjbR - - - 0.0000000000000000000000000000000000000000007715 160.0
CMS1_k127_2992341_16 - - - - 0.000000000000000000000000000000000000003498 150.0
CMS1_k127_2992341_17 AMP binding - - - 0.00000000000000000005242 101.0
CMS1_k127_2992341_18 transport system auxiliary component K18480 - - 0.000000000000000003555 92.0
CMS1_k127_2992341_19 Protein of unknown function (DUF2892) - - - 0.000000000005317 68.0
CMS1_k127_2992341_2 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 422.0
CMS1_k127_2992341_20 - - - - 0.0000000001188 67.0
CMS1_k127_2992341_21 Protein of unknown function (DUF1425) - - - 0.000000002297 63.0
CMS1_k127_2992341_3 Amino Acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 361.0
CMS1_k127_2992341_4 Nitronate monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 352.0
CMS1_k127_2992341_5 abc transporter atp-binding protein K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 329.0
CMS1_k127_2992341_6 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 321.0
CMS1_k127_2992341_7 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 327.0
CMS1_k127_2992341_8 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002993 294.0
CMS1_k127_2992341_9 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006568 268.0
CMS1_k127_3001902_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 1.195e-269 859.0
CMS1_k127_3001902_1 COG3893 inactivated superfamily I helicase - - - 1.204e-221 711.0
CMS1_k127_3001902_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000013 231.0
CMS1_k127_3001902_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001716 241.0
CMS1_k127_3001902_12 carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000004506 225.0
CMS1_k127_3001902_13 SMART ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor K02030 - - 0.0000000000000000000000000000000000000000000000000000001258 205.0
CMS1_k127_3001902_14 FixH - - - 0.0000000000000000000000000000000000000000000000004106 180.0
CMS1_k127_3001902_15 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.00000000000003699 72.0
CMS1_k127_3001902_16 PFAM outer membrane porin - - - 0.000000000004351 78.0
CMS1_k127_3001902_2 Abc transporter K02035 - - 1.618e-217 685.0
CMS1_k127_3001902_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 1.674e-197 619.0
CMS1_k127_3001902_4 pyruvate ferredoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 329.0
CMS1_k127_3001902_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 295.0
CMS1_k127_3001902_6 Hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 289.0
CMS1_k127_3001902_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 287.0
CMS1_k127_3001902_8 pyruvate ferredoxin oxidoreductase K00171 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004665 246.0
CMS1_k127_3001902_9 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005705 248.0
CMS1_k127_3035503_0 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 301.0
CMS1_k127_3035503_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000374 166.0
CMS1_k127_3035503_2 Domain of unknown function (DUF309) - - - 0.00000000000000000000000000001964 122.0
CMS1_k127_3035503_3 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000001004 104.0
CMS1_k127_3035503_4 Major facilitator superfamily K05820 - - 0.0000004239 52.0
CMS1_k127_3050559_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 450.0
CMS1_k127_3050559_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001427 274.0
CMS1_k127_3050559_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000008728 198.0
CMS1_k127_3050559_3 - - - - 0.00000000007797 67.0
CMS1_k127_3087897_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.885e-215 673.0
CMS1_k127_3087897_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.699e-208 655.0
CMS1_k127_3087897_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 302.0
CMS1_k127_3087897_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000007452 235.0
CMS1_k127_3087897_4 YGGT family K02221 - - 0.00000000000000000000000000000000006938 136.0
CMS1_k127_3087897_5 lytic murein transglycosylase K08309 - - 0.000000000000000000000003559 109.0
CMS1_k127_3087897_6 - - - - 0.00000000000000000006234 90.0
CMS1_k127_3105526_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 486.0
CMS1_k127_3105526_1 apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 449.0
CMS1_k127_3105526_2 - - - - 0.000000000000000000000000000000000000000000000000000000004293 202.0
CMS1_k127_3105526_3 Branched-chain amino acid aminotransferase K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000002978 202.0
CMS1_k127_3105526_4 Peptidase, M16 - - - 0.0000000000000000000000000000002421 124.0
CMS1_k127_312269_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1083.0
CMS1_k127_312269_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 502.0
CMS1_k127_312269_2 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 404.0
CMS1_k127_312269_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 320.0
CMS1_k127_312269_4 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000241 231.0
CMS1_k127_312269_5 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000002307 224.0
CMS1_k127_312269_6 - - - - 0.00000000000000000000000000000000000000000000007619 180.0
CMS1_k127_312269_8 Bacterial Ig-like domain (group 2) - - - 0.0003329 49.0
CMS1_k127_3131880_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.97e-271 838.0
CMS1_k127_3131880_1 sulfate adenylyltransferase K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 544.0
CMS1_k127_3131880_2 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 477.0
CMS1_k127_3131880_3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 0.000001546 59.0
CMS1_k127_3147712_0 Saccharopine dehydrogenase K00290 - 1.5.1.7 2.606e-221 690.0
CMS1_k127_3147712_1 2-acylglycerophosphoethanolamine acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 605.0
CMS1_k127_3147712_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 569.0
CMS1_k127_3147712_3 Family of unknown function (DUF695) - - - 0.0000000000000000000000000000000000000000000000000002051 194.0
CMS1_k127_3147712_4 - - - - 0.0000000000000000000000000005362 120.0
CMS1_k127_3147712_5 undecaprenol kinase activity K00901 - 2.7.1.107 0.000000000000000000000000242 109.0
CMS1_k127_3147712_6 Mannosyl-glycoprotein K03796 - - 0.00000000000000000000003237 107.0
CMS1_k127_3147712_7 Protein of unknown function (DUF2892) - - - 0.00000000000000000001667 92.0
CMS1_k127_3151684_0 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K02584 - - 6.397e-262 817.0
CMS1_k127_3151684_1 fumarate reductase, flavoprotein subunit K00239,K00244 - 1.3.5.1,1.3.5.4 2.156e-232 730.0
CMS1_k127_3151684_10 nitrogen fixation protein FixT K02593 - - 0.000000000000000000001286 95.0
CMS1_k127_3151684_2 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 1.693e-222 695.0
CMS1_k127_3151684_3 COG0714 MoxR-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 437.0
CMS1_k127_3151684_4 TIGRFAM SagB-type dehydrogenase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006361 290.0
CMS1_k127_3151684_5 AhpC/TSA family K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
CMS1_k127_3151684_6 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000219 171.0
CMS1_k127_3151684_7 NifQ K15790 - - 0.0000000000000000000000000000000001769 140.0
CMS1_k127_3151684_8 Ferredoxin - - - 0.0000000000000000000000000000002922 124.0
CMS1_k127_3151684_9 - - - - 0.00000000000000000000004112 102.0
CMS1_k127_3168255_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 497.0
CMS1_k127_3168255_1 Epimerase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 417.0
CMS1_k127_3168255_10 thioesterase K07107 - - 0.000000000000000000000000000000000000000001342 161.0
CMS1_k127_3168255_11 Thiamine-binding protein - - - 0.000000000000000000000000000000000000003182 148.0
CMS1_k127_3168255_13 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000293 103.0
CMS1_k127_3168255_2 Glycosyl hydrolase family 3 K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 341.0
CMS1_k127_3168255_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 329.0
CMS1_k127_3168255_4 Curli production assembly/transport component CsgG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 313.0
CMS1_k127_3168255_5 HIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 279.0
CMS1_k127_3168255_6 leucine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002143 281.0
CMS1_k127_3168255_7 COG4464 Capsular polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
CMS1_k127_3168255_9 Lipocalin / cytosolic fatty-acid binding protein family K03098 - - 0.00000000000000000000000000000000000000000000000000000001035 203.0
CMS1_k127_3171022_0 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1000.0
CMS1_k127_3171022_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 523.0
CMS1_k127_3171022_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 515.0
CMS1_k127_3171022_3 Heterodisulfide reductase subunit B K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 427.0
CMS1_k127_3171022_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 343.0
CMS1_k127_3171022_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 338.0
CMS1_k127_3171022_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003475 259.0
CMS1_k127_3171022_7 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000001532 233.0
CMS1_k127_3171022_8 - - - - 0.00000000000000000000000000000000000000000000000000000000002421 214.0
CMS1_k127_3171022_9 Histidine kinase K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000003314 180.0
CMS1_k127_320609_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 4.594e-282 883.0
CMS1_k127_320609_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.363e-223 698.0
CMS1_k127_320609_10 - - - - 0.00000000000000000000000000000000000002142 154.0
CMS1_k127_320609_11 - - - - 0.0000000000000000000000000000001575 124.0
CMS1_k127_320609_12 - - - - 0.00000000000000000000001163 103.0
CMS1_k127_320609_13 PFAM Fimbrial assembly family protein - - - 0.000000000000000000002592 100.0
CMS1_k127_320609_14 - - - - 0.00000000000001471 83.0
CMS1_k127_320609_15 - - - - 0.00000000001872 71.0
CMS1_k127_320609_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 7.197e-218 682.0
CMS1_k127_320609_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 507.0
CMS1_k127_320609_4 ABC transporter permease K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 459.0
CMS1_k127_320609_5 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 427.0
CMS1_k127_320609_6 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 356.0
CMS1_k127_320609_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003508 287.0
CMS1_k127_320609_8 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001327 244.0
CMS1_k127_320609_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000002307 214.0
CMS1_k127_3208922_0 Fatty acid cis/trans isomerase (CTI) - - - 3.86e-285 896.0
CMS1_k127_3208922_1 Endoribonuclease that initiates mRNA decay K18682 - - 2.167e-226 712.0
CMS1_k127_3208922_10 Cytochrome c family protein - - - 0.0000000000000000000000000000000000000000000000001266 186.0
CMS1_k127_3208922_11 thioesterase K02614 - - 0.00000000000000000000000000000000002819 138.0
CMS1_k127_3208922_12 Chemoreceptor zinc-binding domain - - - 0.0000000004471 67.0
CMS1_k127_3208922_2 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 474.0
CMS1_k127_3208922_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 439.0
CMS1_k127_3208922_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 350.0
CMS1_k127_3208922_5 hmm pf04305 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 346.0
CMS1_k127_3208922_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 322.0
CMS1_k127_3208922_7 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000003631 211.0
CMS1_k127_3208922_8 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000377 198.0
CMS1_k127_3208922_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000007135 198.0
CMS1_k127_323659_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.26e-322 1000.0
CMS1_k127_323659_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 9.5e-214 669.0
CMS1_k127_323659_2 2-nitropropane dioxygenase K00459 - 1.13.12.16 1.203e-196 616.0
CMS1_k127_323659_3 phosphohydrolase (DHH superfamily) K07097 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 541.0
CMS1_k127_323659_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 334.0
CMS1_k127_323659_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000005438 226.0
CMS1_k127_323659_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001311 194.0
CMS1_k127_323659_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000003752 144.0
CMS1_k127_3238975_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 1.374e-214 672.0
CMS1_k127_3238975_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 6.221e-213 669.0
CMS1_k127_3238975_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 559.0
CMS1_k127_3238975_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 473.0
CMS1_k127_3238975_4 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000001318 183.0
CMS1_k127_3238975_5 Heat shock protein DnaJ domain protein K06203,K07126 - - 0.0000000000000000000000000000000001093 135.0
CMS1_k127_3238975_7 Nitroreductase family - - - 0.0000000000000000003322 87.0
CMS1_k127_3246838_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 482.0
CMS1_k127_3246838_1 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 426.0
CMS1_k127_3246838_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 370.0
CMS1_k127_3246838_3 Major Facilitator Superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 367.0
CMS1_k127_3246838_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 313.0
CMS1_k127_3246838_6 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000601 91.0
CMS1_k127_3261132_0 Belongs to the ClpA ClpB family K03694,K03695 - - 0.0 1139.0
CMS1_k127_3261132_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.26e-204 649.0
CMS1_k127_3261132_2 Could be involved in insertion of integral membrane proteins into the membrane - - - 0.00000000000000000000000000000000000004037 145.0
CMS1_k127_3261132_3 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000001413 145.0
CMS1_k127_3261132_4 - - - - 0.00000000000000000000000000000000003241 137.0
CMS1_k127_3261132_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000004861 122.0
CMS1_k127_3261132_6 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000161 82.0
CMS1_k127_3340062_0 phosphate transporter K03306 - - 7.423e-197 627.0
CMS1_k127_3340062_1 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 540.0
CMS1_k127_3340062_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 495.0
CMS1_k127_3340062_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 460.0
CMS1_k127_3340062_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 456.0
CMS1_k127_3340062_5 phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 452.0
CMS1_k127_3340062_6 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 460.0
CMS1_k127_3340062_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 295.0
CMS1_k127_3340062_8 (EAL) domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 292.0
CMS1_k127_3340062_9 PhoU family K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 284.0
CMS1_k127_3383332_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 569.0
CMS1_k127_3383332_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 308.0
CMS1_k127_3383332_2 molybdopterin oxidoreductase - - - 0.0000000000000005485 78.0
CMS1_k127_3383578_0 asparagine K01953 - 6.3.5.4 5.869e-202 647.0
CMS1_k127_3383578_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002653 251.0
CMS1_k127_3383578_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000003526 199.0
CMS1_k127_3383578_3 Glycosyl transferase 4-like - - - 0.000000000000000000000000001983 121.0
CMS1_k127_3390801_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1583.0
CMS1_k127_3390801_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 287.0
CMS1_k127_3390801_2 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000012 275.0
CMS1_k127_3390801_3 - - - - 0.0000000000000000000000000000000000000002987 155.0
CMS1_k127_3390801_4 Helicase K08282 - 2.7.11.1 0.000000000002123 77.0
CMS1_k127_3443098_0 Cytochrome c oxidase accessory protein - - - 3.084e-225 706.0
CMS1_k127_3443098_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 1.659e-215 675.0
CMS1_k127_3443098_10 Toluene tolerance protein K07323 - - 0.0000000000000000000000000000000000000000000000009093 183.0
CMS1_k127_3443098_11 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000003353 157.0
CMS1_k127_3443098_12 MMPL family K07003 - - 0.0000000000000000000000000001775 118.0
CMS1_k127_3443098_13 Protein of unknown function, DUF255 - - - 0.000000000001909 77.0
CMS1_k127_3443098_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 559.0
CMS1_k127_3443098_3 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 379.0
CMS1_k127_3443098_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 368.0
CMS1_k127_3443098_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 291.0
CMS1_k127_3443098_6 PFAM Resolvase, N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002491 248.0
CMS1_k127_3443098_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000007453 237.0
CMS1_k127_3443098_8 (Lipo)protein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000001176 234.0
CMS1_k127_3443098_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000001183 237.0
CMS1_k127_3446834_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.316e-313 969.0
CMS1_k127_3446834_1 PFAM Alpha amylase, catalytic K00690 - 2.4.1.7 6.553e-302 932.0
CMS1_k127_3446834_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.375e-257 800.0
CMS1_k127_3446834_3 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 6.963e-220 686.0
CMS1_k127_3446834_4 Na Pi-cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 586.0
CMS1_k127_3446834_5 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 503.0
CMS1_k127_3446834_6 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 433.0
CMS1_k127_3446834_7 COG1648 Siroheme synthase (precorrin-2 oxidase ferrochelatase domain) K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000001 248.0
CMS1_k127_3446834_8 mannosylglycerate metabolic process K05947,K07026,K15918 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000007197 245.0
CMS1_k127_3446834_9 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000006622 212.0
CMS1_k127_3491148_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009903 445.0
CMS1_k127_3491148_1 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 368.0
CMS1_k127_3491148_2 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006729 283.0
CMS1_k127_3491148_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004753 256.0
CMS1_k127_3491148_4 Protein of unknown function (DUF3450) - - - 0.00000000000000000000000000000000000000000000000000000000002161 214.0
CMS1_k127_3491148_5 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000006919 200.0
CMS1_k127_3491148_6 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000005459 179.0
CMS1_k127_3491148_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000256 157.0
CMS1_k127_3491148_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000001218 140.0
CMS1_k127_3491148_9 Protein of unknown function (DUF1566) - - - 0.00002848 49.0
CMS1_k127_3522334_0 Belongs to the UbiD family K03182 - 4.1.1.98 1.294e-302 936.0
CMS1_k127_3522334_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.176e-283 879.0
CMS1_k127_3522334_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 449.0
CMS1_k127_3522334_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 432.0
CMS1_k127_3522334_4 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 366.0
CMS1_k127_3522334_5 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 364.0
CMS1_k127_3522334_6 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 327.0
CMS1_k127_3522334_7 - - - - 0.00000000000000000000000000000000001195 138.0
CMS1_k127_3522334_8 FxsA cytoplasmic membrane protein K01649,K07113 - 2.3.3.13 0.00000000000000000000000000961 114.0
CMS1_k127_352283_0 belongs to the CobB CobQ family K13788 - 2.3.1.8 1.054e-219 702.0
CMS1_k127_352283_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 363.0
CMS1_k127_352283_2 SEC-C motif K09858 - - 0.0000000000000000000000000000000000000000000001753 171.0
CMS1_k127_352283_3 TIGRFAM Diguanylate cyclase - - - 0.0000000006137 61.0
CMS1_k127_3528493_0 Flotillin K07192 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000008595 216.0
CMS1_k127_3528493_1 Protein of unknown function (DUF1449) - - - 0.000000000000000000000000000000000000000000000000000000007593 205.0
CMS1_k127_3528493_2 Psort location Cytoplasmic, score 8.96 K03969 - - 0.0000000000000000000000000000000000000000000000000307 185.0
CMS1_k127_3684004_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 1.5e-323 1029.0
CMS1_k127_3684004_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.633e-278 887.0
CMS1_k127_3684004_10 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 336.0
CMS1_k127_3684004_11 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 289.0
CMS1_k127_3684004_12 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 298.0
CMS1_k127_3684004_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002292 269.0
CMS1_k127_3684004_14 Belongs to the NadC ModD family K03813 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002422 267.0
CMS1_k127_3684004_15 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000004632 233.0
CMS1_k127_3684004_16 aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000003607 216.0
CMS1_k127_3684004_17 Heme iron utilization protein K07226 - - 0.0000000000000000000000000000000000000000000000005676 179.0
CMS1_k127_3684004_18 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000002896 163.0
CMS1_k127_3684004_19 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000516 171.0
CMS1_k127_3684004_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 9.892e-233 735.0
CMS1_k127_3684004_20 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000609 151.0
CMS1_k127_3684004_21 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000002309 123.0
CMS1_k127_3684004_22 TOBE domain protein K02019 - - 0.00000000000000000000000003944 112.0
CMS1_k127_3684004_23 TOBE domain K02019 - - 0.0000000000000000000000004376 109.0
CMS1_k127_3684004_24 belongs to the thioredoxin family K03671 - - 0.000000000000000000004852 97.0
CMS1_k127_3684004_25 PFAM TOBE domain protein - - - 0.000000000001807 73.0
CMS1_k127_3684004_28 two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K07715 - - 0.0004482 48.0
CMS1_k127_3684004_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 7.356e-226 715.0
CMS1_k127_3684004_4 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.634e-209 655.0
CMS1_k127_3684004_5 Arginosuccinate synthase K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 488.0
CMS1_k127_3684004_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 441.0
CMS1_k127_3684004_7 ATP-binding protein K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 394.0
CMS1_k127_3684004_8 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 395.0
CMS1_k127_3684004_9 ABC transporter permease K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 357.0
CMS1_k127_3703762_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 4.814e-217 689.0
CMS1_k127_3703762_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000007555 209.0
CMS1_k127_3703762_2 - - - - 0.0000000000000166 78.0
CMS1_k127_3754771_0 Glycolate oxidase subunit K00104 - 1.1.3.15 8.071e-260 805.0
CMS1_k127_3754771_1 TonB-dependent copper receptor K02014 - - 7.931e-225 716.0
CMS1_k127_3754771_10 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 414.0
CMS1_k127_3754771_11 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 372.0
CMS1_k127_3754771_12 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 335.0
CMS1_k127_3754771_13 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 307.0
CMS1_k127_3754771_14 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000006518 265.0
CMS1_k127_3754771_15 Nudix domain K08077 - 3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000076 243.0
CMS1_k127_3754771_16 membrane K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000000004809 230.0
CMS1_k127_3754771_17 Plasminogen-binding protein pgbA N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000003129 232.0
CMS1_k127_3754771_18 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000007142 243.0
CMS1_k127_3754771_19 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000008334 198.0
CMS1_k127_3754771_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.872e-212 671.0
CMS1_k127_3754771_20 MltA-interacting MipA family protein K07274 - - 0.00000000000000000000000000000000000000000000000000007457 194.0
CMS1_k127_3754771_21 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000001172 181.0
CMS1_k127_3754771_22 Thioredoxin - - - 0.00000000000000000000000000000000000000000174 157.0
CMS1_k127_3754771_23 NlpC/P60 family K13695 - - 0.0000000000000000000000000000000000000001985 155.0
CMS1_k127_3754771_24 - - - - 0.00000000000000000000000000000000106 136.0
CMS1_k127_3754771_25 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000004647 128.0
CMS1_k127_3754771_26 - - - - 0.0000000000000005187 82.0
CMS1_k127_3754771_27 - - - - 0.0000000000000005323 79.0
CMS1_k127_3754771_28 - K06950 - - 0.0000000004153 63.0
CMS1_k127_3754771_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 578.0
CMS1_k127_3754771_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 532.0
CMS1_k127_3754771_5 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 529.0
CMS1_k127_3754771_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 482.0
CMS1_k127_3754771_7 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 459.0
CMS1_k127_3754771_8 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 447.0
CMS1_k127_3754771_9 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 417.0
CMS1_k127_3773453_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1328.0
CMS1_k127_3773453_1 Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein K07147 - - 4.034e-209 655.0
CMS1_k127_3773453_10 Domain of unknown function (DUF2018) - - - 0.000000000000000000006827 95.0
CMS1_k127_3773453_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 439.0
CMS1_k127_3773453_3 Transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 342.0
CMS1_k127_3773453_4 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 287.0
CMS1_k127_3773453_5 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008828 265.0
CMS1_k127_3773453_6 cytochrome C oxidoreductase subunit B - - - 0.000000000000000000000000000000000000000002888 156.0
CMS1_k127_3773453_7 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000000000000002192 117.0
CMS1_k127_3773453_8 - - - - 0.00000000000000000000003226 100.0
CMS1_k127_3773453_9 - - - - 0.0000000000000000000002384 100.0
CMS1_k127_3775755_0 MMPL family K07003 - - 8.953e-236 751.0
CMS1_k127_3775755_1 TonB dependent receptor K02014 - - 1.329e-227 724.0
CMS1_k127_3775755_2 COG0348 Polyferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 473.0
CMS1_k127_3775755_3 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 321.0
CMS1_k127_3775755_4 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002938 243.0
CMS1_k127_3775755_5 Uncharacterized protein domain (DUF2202) - - - 0.000000000000000000000000000000000000000000000000000000000004841 216.0
CMS1_k127_3775755_6 phosphoesterase, PA-phosphatase - - - 0.00000000000000000000000000000000000000000002959 168.0
CMS1_k127_3775755_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000005584 168.0
CMS1_k127_3775755_8 Cytochrome c - - - 0.0000000000000000000000000000000000000000004886 161.0
CMS1_k127_3775755_9 - - - - 0.00000000000001006 76.0
CMS1_k127_3804379_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1088.0
CMS1_k127_3811177_0 Sulfatase K01130 - 3.1.6.1 5.634e-266 822.0
CMS1_k127_3811177_1 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 310.0
CMS1_k127_3811177_2 Pathogenicity locus - - - 0.0000000000000000000000000000000000007334 140.0
CMS1_k127_3811177_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000421 118.0
CMS1_k127_3811177_4 OmpA-like transmembrane domain - - - 0.0000000000000000000001098 107.0
CMS1_k127_3886773_0 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 602.0
CMS1_k127_3886773_1 ATP-dependent CLP protease ATP-binding subunit K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 394.0
CMS1_k127_3886773_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000003935 144.0
CMS1_k127_3908808_0 Metallophosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 344.0
CMS1_k127_3908808_1 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 291.0
CMS1_k127_3908808_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000005417 186.0
CMS1_k127_3971371_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1018.0
CMS1_k127_3971371_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 585.0
CMS1_k127_3971371_10 - - - - 0.00000000000000000000000000000000000000000000000001551 183.0
CMS1_k127_3971371_12 - - - - 0.000000000000003992 76.0
CMS1_k127_3971371_2 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 418.0
CMS1_k127_3971371_3 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 413.0
CMS1_k127_3971371_4 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 362.0
CMS1_k127_3971371_5 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 352.0
CMS1_k127_3971371_6 alkylphosphonate uptake protein K06193 - - 0.000000000000000000000000000000000000000000000000000000000008846 208.0
CMS1_k127_3971371_7 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000009275 204.0
CMS1_k127_3971371_8 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000001744 196.0
CMS1_k127_3971371_9 - - - - 0.0000000000000000000000000000000000000000000000000003586 189.0
CMS1_k127_4004338_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 7.89e-233 725.0
CMS1_k127_4004338_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 477.0
CMS1_k127_4004338_10 Fibronectin type 3 domain-containing protein K06882 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005145 282.0
CMS1_k127_4004338_11 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000001092 199.0
CMS1_k127_4004338_12 Cell division protein FtsX K09811 - - 0.00000000000000000000000000000000000002964 154.0
CMS1_k127_4004338_13 - - - - 0.00000000000000000000003942 101.0
CMS1_k127_4004338_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 473.0
CMS1_k127_4004338_3 na -driven multidrug efflux - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 462.0
CMS1_k127_4004338_4 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 454.0
CMS1_k127_4004338_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 436.0
CMS1_k127_4004338_6 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 377.0
CMS1_k127_4004338_7 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 367.0
CMS1_k127_4004338_8 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 349.0
CMS1_k127_4004338_9 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003935 287.0
CMS1_k127_4021648_0 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 301.0
CMS1_k127_4021648_1 nitrate reductase K02570 - - 0.00000000000000000000000000000000000000000000000000000000007573 206.0
CMS1_k127_4021648_2 - - - - 0.00000000000000000000000000000003983 127.0
CMS1_k127_4033342_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 5.411e-212 663.0
CMS1_k127_4033342_1 Cytochrome c - - - 2.566e-202 646.0
CMS1_k127_4033342_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 565.0
CMS1_k127_4033342_3 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 463.0
CMS1_k127_4033342_4 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901576 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 448.0
CMS1_k127_4033342_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 303.0
CMS1_k127_4033342_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000009869 243.0
CMS1_k127_4033342_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000006345 206.0
CMS1_k127_4033342_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000001382 100.0
CMS1_k127_4033342_9 - - - - 0.0000008195 57.0
CMS1_k127_4044828_0 Efflux pump membrane transporter K03296,K18138 - - 3.272e-246 775.0
CMS1_k127_405611_0 Belongs to the NifD NifK NifE NifN family K02592 - - 2.825e-219 686.0
CMS1_k127_405611_1 Nitrogen fixation protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003051 228.0
CMS1_k127_405611_2 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.00000000000000000000000000000000000000000000000000000000001342 210.0
CMS1_k127_405611_3 Low-potential electron donor to a number of redox enzymes K03839 - - 0.000000000000000000000000000001281 121.0
CMS1_k127_405611_4 cofactor biosynthesis protein NifE K02587 - - 0.0000000000154 64.0
CMS1_k127_4056232_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 575.0
CMS1_k127_4056232_1 Cytochrome c biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 553.0
CMS1_k127_4056232_2 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003929 275.0
CMS1_k127_4056232_3 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000002616 198.0
CMS1_k127_4056232_4 - - - - 0.0000000000000000000000000000000001312 135.0
CMS1_k127_407826_0 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 356.0
CMS1_k127_407826_1 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 328.0
CMS1_k127_407826_2 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000004817 240.0
CMS1_k127_407826_3 - - - - 0.000000000000000000000000000000000000000000000005698 175.0
CMS1_k127_407826_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000008044 159.0
CMS1_k127_407826_5 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000007536 74.0
CMS1_k127_407826_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000682 68.0
CMS1_k127_4096613_0 COGs COG3864 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 545.0
CMS1_k127_4096613_1 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 539.0
CMS1_k127_4096613_10 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000005076 171.0
CMS1_k127_4096613_11 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000848 170.0
CMS1_k127_4096613_12 PFAM peptidase M48 Ste24p K03799 - - 0.000000000000000000000000000000000000000000637 170.0
CMS1_k127_4096613_13 oxygen carrier activity - - - 0.00000000000000000000000000000000001002 139.0
CMS1_k127_4096613_15 RND efflux system, outer membrane lipoprotein K18139 - - 0.0000000000007309 70.0
CMS1_k127_4096613_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 370.0
CMS1_k127_4096613_3 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 359.0
CMS1_k127_4096613_4 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 347.0
CMS1_k127_4096613_5 COGs COG0647 sugar phosphatase of the HAD superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 334.0
CMS1_k127_4096613_6 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005232 277.0
CMS1_k127_4096613_7 sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002811 248.0
CMS1_k127_4096613_8 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002037 242.0
CMS1_k127_4124960_0 ABC transporter K11085 - - 1.912e-246 772.0
CMS1_k127_4124960_1 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 521.0
CMS1_k127_4124960_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 350.0
CMS1_k127_4124960_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 318.0
CMS1_k127_4124960_4 Glycosyltransferase like family 2 K20444 - - 0.00000000000000000000000000000000000000004053 159.0
CMS1_k127_4128188_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 9.967e-309 951.0
CMS1_k127_4128188_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 1.439e-258 815.0
CMS1_k127_4128188_10 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 323.0
CMS1_k127_4128188_11 Methyltransferase domain K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 285.0
CMS1_k127_4128188_12 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006198 265.0
CMS1_k127_4128188_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007663 256.0
CMS1_k127_4128188_14 thiamine-phosphate diphosphorylase activity K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000004843 189.0
CMS1_k127_4128188_15 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000000000000000003082 145.0
CMS1_k127_4128188_16 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000004565 141.0
CMS1_k127_4128188_17 - - - - 0.0000008214 53.0
CMS1_k127_4128188_2 Single-stranded-DNA-specific exonuclease (RecJ) K07462 - - 2.411e-206 654.0
CMS1_k127_4128188_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 591.0
CMS1_k127_4128188_4 Belongs to the UPF0324 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 506.0
CMS1_k127_4128188_5 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 424.0
CMS1_k127_4128188_6 ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 370.0
CMS1_k127_4128188_7 Abc transporter K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 353.0
CMS1_k127_4128188_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 339.0
CMS1_k127_4128188_9 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 337.0
CMS1_k127_4157340_0 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 606.0
CMS1_k127_4157340_1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.00000000000000003179 90.0
CMS1_k127_4161008_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006634 249.0
CMS1_k127_4161008_1 Transglutaminase-like superfamily K07184 - - 0.00000000000000000000000000000000000000000000000000000006836 218.0
CMS1_k127_4161008_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000002594 164.0
CMS1_k127_4161008_3 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000006218 94.0
CMS1_k127_4161008_4 COG0714 MoxR-like ATPases K03924 - - 0.000000000002662 68.0
CMS1_k127_4172544_0 AAA domain - - - 2.846e-243 775.0
CMS1_k127_4172544_1 Glycosyl transferase family 21 K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 487.0
CMS1_k127_4172544_11 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000015 105.0
CMS1_k127_4172544_12 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000003676 87.0
CMS1_k127_4172544_3 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 368.0
CMS1_k127_4172544_4 chitin catabolic process K01921,K03933,K06919,K08086,K08307,K13381 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005623,GO:0008843,GO:0016787,GO:0016798,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.2.1.14,3.2.1.17,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
CMS1_k127_4172544_5 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 343.0
CMS1_k127_4172544_6 Predicted permease - - - 0.000000000000000000000000000000000000000000000000000000004962 206.0
CMS1_k127_4172544_7 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000006538 209.0
CMS1_k127_4172544_8 Predicted permease - - - 0.00000000000000000000000000000000000000000000000008556 181.0
CMS1_k127_4172544_9 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000005868 155.0
CMS1_k127_4177693_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.296e-202 633.0
CMS1_k127_4177693_1 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 323.0
CMS1_k127_4178534_0 DNA polymerase K02337 - 2.7.7.7 0.0 1635.0
CMS1_k127_4178534_1 Sulfatase - - - 0.000000000000000000000000000000000000002258 150.0
CMS1_k127_4203273_0 arginine decarboxylase K01585 - 4.1.1.19 6.005e-295 915.0
CMS1_k127_4203273_1 Belongs to the FtsK SpoIIIE SftA family K03466 - - 9.32e-284 890.0
CMS1_k127_4203273_10 Cytochrome P460 - - - 0.0000000000000000000000000000000000000004614 154.0
CMS1_k127_4203273_11 PFAM VanZ - - - 0.0000000627 59.0
CMS1_k127_4203273_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 2.306e-207 649.0
CMS1_k127_4203273_3 Aminotransferase K00812 - 2.6.1.1 1.009e-200 630.0
CMS1_k127_4203273_4 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 375.0
CMS1_k127_4203273_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004011 275.0
CMS1_k127_4203273_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
CMS1_k127_4203273_7 YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001215 258.0
CMS1_k127_4203273_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000123 240.0
CMS1_k127_4203273_9 Staphylococcal nuclease homologue - - - 0.00000000000000000000000000000000000000000000004902 173.0
CMS1_k127_4208098_0 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K16881 - 2.7.7.13,5.4.2.8 0.0 1364.0
CMS1_k127_4208098_1 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1141.0
CMS1_k127_4208098_2 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0 1113.0
CMS1_k127_4208098_3 MMPL family K07003 - - 1.636e-233 742.0
CMS1_k127_4208098_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.933e-195 619.0
CMS1_k127_4208098_5 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000001257 202.0
CMS1_k127_4208098_6 - - - - 0.0000000000000000000000000000000000000007792 149.0
CMS1_k127_4208098_7 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000004846 66.0
CMS1_k127_421795_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 576.0
CMS1_k127_421795_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 522.0
CMS1_k127_421795_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 400.0
CMS1_k127_421795_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.0000000000000000000000000000000000000000000000000000001878 198.0
CMS1_k127_421795_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000003997 113.0
CMS1_k127_421795_5 MOSC domain - - - 0.00000000000000000000000001563 115.0
CMS1_k127_4235735_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.87e-253 786.0
CMS1_k127_4235735_1 o-acetylhomoserine K01740 - 2.5.1.49 2.197e-226 706.0
CMS1_k127_4235735_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 2.615e-196 617.0
CMS1_k127_4235735_3 hydrolase K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 349.0
CMS1_k127_4235735_4 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 293.0
CMS1_k127_4235735_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000002235 220.0
CMS1_k127_4235735_6 RDD family - - - 0.000000000000000000000000000000000000000000000000000005468 194.0
CMS1_k127_4235735_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000002114 77.0
CMS1_k127_4235735_8 Protein of unknown function (DUF3592) - - - 0.00003698 55.0
CMS1_k127_4238356_0 abc transporter atp-binding protein - - - 1.498e-294 909.0
CMS1_k127_4238356_1 growth of symbiont in host cell K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 620.0
CMS1_k127_4238356_10 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000001203 118.0
CMS1_k127_4238356_11 Protein of unknown function (DUF1653) - - - 0.000000000000000000000006686 103.0
CMS1_k127_4238356_2 dna polymerase iii K10857 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 352.0
CMS1_k127_4238356_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 292.0
CMS1_k127_4238356_4 SMART GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000878 253.0
CMS1_k127_4238356_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000002235 214.0
CMS1_k127_4238356_6 Rhodanese-like domain - - - 0.00000000000000000000000000000000003513 138.0
CMS1_k127_4238356_7 - - - - 0.00000000000000000000000000000004621 128.0
CMS1_k127_4238356_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000001402 126.0
CMS1_k127_4240042_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 417.0
CMS1_k127_4240042_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 407.0
CMS1_k127_4240042_2 lipid a biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 300.0
CMS1_k127_4240042_3 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003111 278.0
CMS1_k127_4240042_4 Peptide-methionine (R)-S-oxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000001799 205.0
CMS1_k127_4284040_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 511.0
CMS1_k127_4284040_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 340.0
CMS1_k127_4284040_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 317.0
CMS1_k127_4286919_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 7.235e-214 669.0
CMS1_k127_4286919_1 dehydrogenase K08325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 591.0
CMS1_k127_4286919_10 - - - - 0.00000000000000000000000000000224 136.0
CMS1_k127_4286919_11 - - - - 0.000000000000000000000000007672 120.0
CMS1_k127_4286919_12 - - - - 0.000000000000000000004304 105.0
CMS1_k127_4286919_13 - - - - 0.0000000000001441 83.0
CMS1_k127_4286919_14 Histidine kinase K03407 - 2.7.13.3 0.000000000002959 74.0
CMS1_k127_4286919_15 modulator of drug activity K03923 - - 0.000002578 49.0
CMS1_k127_4286919_16 GtrA-like protein - - - 0.00001349 52.0
CMS1_k127_4286919_2 MerR HTH family regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 338.0
CMS1_k127_4286919_3 PFAM Glycosyl transferase family 2 K00721,K00786 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 291.0
CMS1_k127_4286919_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001389 241.0
CMS1_k127_4286919_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000007599 198.0
CMS1_k127_4286919_6 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000001068 196.0
CMS1_k127_4286919_7 lactate metabolic process - - - 0.000000000000000000000000000000000000000000000000000000144 198.0
CMS1_k127_4286919_8 Nucleoside 2-deoxyribosyltransferase - - - 0.00000000000000000000000000000000000000009158 156.0
CMS1_k127_4286919_9 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000000005233 130.0
CMS1_k127_4312584_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000512 170.0
CMS1_k127_4312584_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000001071 88.0
CMS1_k127_4373909_0 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 9.158e-203 645.0
CMS1_k127_4373909_1 glycosyl transferase K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 298.0
CMS1_k127_4422017_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 6.433e-196 617.0
CMS1_k127_4422017_1 Nitrogen fixation protein NifW K02595 - - 0.0000000000000000000000000000000000000000000000000000000002219 204.0
CMS1_k127_4422017_2 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000001086 177.0
CMS1_k127_4422017_3 Ferredoxin - - - 0.00000000000000000000000000000000000000000000007453 172.0
CMS1_k127_4422017_4 NifZ domain K02597 - - 0.0000000000000000000000000000000000000002271 153.0
CMS1_k127_4422017_5 Low-potential electron donor to a number of redox enzymes K03839 - - 0.00000000000000000000000000000000000003251 144.0
CMS1_k127_444528_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 484.0
CMS1_k127_444528_1 MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000001793 191.0
CMS1_k127_444528_2 transport protein K03559 - - 0.000000000000000000000000000000000000000000000000002796 185.0
CMS1_k127_444528_3 energy transducer activity K03646,K03832 - - 0.00000000000000000000000000000000000007329 152.0
CMS1_k127_4475934_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1436.0
CMS1_k127_4475934_1 FAD dependent oxidoreductase - - - 6.315e-217 682.0
CMS1_k127_4475934_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 515.0
CMS1_k127_4475934_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 386.0
CMS1_k127_4475934_5 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 323.0
CMS1_k127_4475934_6 helicase activity - - - 0.0000000000000000000000000000000004901 145.0
CMS1_k127_4488552_0 Belongs to the 5'-nucleotidase family K01119,K17224 - 3.1.3.6,3.1.4.16 0.0 1039.0
CMS1_k127_4488552_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K15576 - - 1.711e-262 813.0
CMS1_k127_4488552_10 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 355.0
CMS1_k127_4488552_11 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 308.0
CMS1_k127_4488552_12 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 310.0
CMS1_k127_4488552_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 306.0
CMS1_k127_4488552_14 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000002284 265.0
CMS1_k127_4488552_15 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000000000000000000002895 244.0
CMS1_k127_4488552_16 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000000000000000000006172 207.0
CMS1_k127_4488552_17 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000003571 199.0
CMS1_k127_4488552_18 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000000000000000000001053 198.0
CMS1_k127_4488552_19 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000006345 172.0
CMS1_k127_4488552_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 550.0
CMS1_k127_4488552_20 oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000000000000008311 164.0
CMS1_k127_4488552_21 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000009532 131.0
CMS1_k127_4488552_22 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000001596 117.0
CMS1_k127_4488552_24 phosphorelay sensor kinase activity - - - 0.00000000000002253 74.0
CMS1_k127_4488552_3 molybdopterin biosynthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 507.0
CMS1_k127_4488552_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 484.0
CMS1_k127_4488552_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K16076,K18093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 472.0
CMS1_k127_4488552_6 COG0600 ABC-type nitrate sulfonate bicarbonate transport system permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 428.0
CMS1_k127_4488552_7 ABC transporter K15555,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 427.0
CMS1_k127_4488552_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 383.0
CMS1_k127_4488552_9 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 376.0
CMS1_k127_455311_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.951e-231 721.0
CMS1_k127_455311_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000002448 131.0
CMS1_k127_4559515_0 Sulfatase - - - 2.12e-253 797.0
CMS1_k127_4559515_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 7.924e-216 678.0
CMS1_k127_4559515_2 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 559.0
CMS1_k127_4559515_3 heptosyltransferase ii K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 453.0
CMS1_k127_4559515_4 lipopolysaccharide core region biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 444.0
CMS1_k127_4559515_5 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 391.0
CMS1_k127_4559515_6 Cytochrome c553 K08738 - - 0.0000000000000000000000000000000009045 132.0
CMS1_k127_4571512_0 transporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 586.0
CMS1_k127_4571512_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 425.0
CMS1_k127_4571512_2 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 320.0
CMS1_k127_4571512_3 TrkA-N domain K10716 - - 0.00000000000000000000000000000000000000000000007082 177.0
CMS1_k127_4571512_4 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000001763 109.0
CMS1_k127_4571512_5 potassium channel protein K10716 - - 0.00000001766 57.0
CMS1_k127_4582619_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.839e-241 754.0
CMS1_k127_4582619_1 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 358.0
CMS1_k127_4582619_2 Protein of unknown function (DUF1439) - - - 0.0000001407 60.0
CMS1_k127_4644074_0 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 373.0
CMS1_k127_4644074_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 365.0
CMS1_k127_4644074_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000158 198.0
CMS1_k127_4644074_3 - - - - 0.000000000000000000000000000000000000009999 147.0
CMS1_k127_4644074_4 - - - - 0.0000000000000000000000000000000000001154 146.0
CMS1_k127_4670831_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1181.0
CMS1_k127_4670831_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 570.0
CMS1_k127_4670831_2 AsmA-like C-terminal region - - - 0.000000000000007775 77.0
CMS1_k127_4711325_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1074.0
CMS1_k127_4711325_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000002985 57.0
CMS1_k127_4716048_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1212.0
CMS1_k127_4716048_1 Aminotransferase K14261 - - 2.469e-242 751.0
CMS1_k127_4716048_10 - - - - 0.000000000000000000000000000001501 123.0
CMS1_k127_4716048_11 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000001561 123.0
CMS1_k127_4716048_12 Protein conserved in bacteria - - - 0.0000000000000000000000000007359 124.0
CMS1_k127_4716048_2 homoserine dehydrogenase K00003 - 1.1.1.3 4.751e-212 664.0
CMS1_k127_4716048_3 PFAM Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 504.0
CMS1_k127_4716048_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 397.0
CMS1_k127_4716048_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 304.0
CMS1_k127_4716048_6 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 280.0
CMS1_k127_4716048_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002083 251.0
CMS1_k127_4716048_8 - - - - 0.0000000000000000000000000000000000002213 146.0
CMS1_k127_4716048_9 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000004048 142.0
CMS1_k127_4722661_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 4.661e-297 927.0
CMS1_k127_4722661_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 5.543e-219 698.0
CMS1_k127_4722661_2 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007809 268.0
CMS1_k127_4722661_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000013 70.0
CMS1_k127_4749923_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 470.0
CMS1_k127_4749923_1 protein conserved in bacteria K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000001233 226.0
CMS1_k127_4749923_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000002846 106.0
CMS1_k127_4821294_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 520.0
CMS1_k127_4821294_1 Potassium channel protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 472.0
CMS1_k127_4821294_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 411.0
CMS1_k127_4821294_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 389.0
CMS1_k127_4821294_4 dna polymerase iii K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 293.0
CMS1_k127_4821294_5 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
CMS1_k127_4821294_6 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000004962 113.0
CMS1_k127_4845362_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.945e-304 943.0
CMS1_k127_4845362_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0000018,GO:0008150,GO:0009892,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0080090 - 6.246e-303 944.0
CMS1_k127_4845362_10 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000000000000000000000000000000000000000000000000000000000002981 236.0
CMS1_k127_4845362_11 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000006471 218.0
CMS1_k127_4845362_12 transcriptional regulator, Crp K01420 - - 0.0000000000000000000000000000000000000000000000000000000009625 207.0
CMS1_k127_4845362_13 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000751 204.0
CMS1_k127_4845362_14 - - - - 0.000000000000000000000000000000000000000000000000000003224 196.0
CMS1_k127_4845362_15 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000001149 145.0
CMS1_k127_4845362_16 - - - - 0.00000000000000000000000000000005172 135.0
CMS1_k127_4845362_17 - - - - 0.0000000000000000000000001262 110.0
CMS1_k127_4845362_18 cytochrome - - - 0.0000000000000000000001406 103.0
CMS1_k127_4845362_19 Proprotein convertase P-domain - - - 0.000000000000000000003463 109.0
CMS1_k127_4845362_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.095e-252 785.0
CMS1_k127_4845362_20 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000000003797 95.0
CMS1_k127_4845362_21 - - - - 0.000000000000002342 79.0
CMS1_k127_4845362_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009157 613.0
CMS1_k127_4845362_4 COG0436 Aspartate tyrosine aromatic aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 550.0
CMS1_k127_4845362_5 potassium channel protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 499.0
CMS1_k127_4845362_6 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 472.0
CMS1_k127_4845362_7 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 398.0
CMS1_k127_4845362_8 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 389.0
CMS1_k127_4845362_9 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 383.0
CMS1_k127_4862528_0 Belongs to the peptidase M16 family - - - 2.139e-210 662.0
CMS1_k127_4862528_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 539.0
CMS1_k127_4862528_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 523.0
CMS1_k127_4862528_3 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 479.0
CMS1_k127_4862528_4 dehydrogenase K00076 - 1.1.1.159 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 446.0
CMS1_k127_4862528_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 310.0
CMS1_k127_4862528_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 273.0
CMS1_k127_4862528_7 TIGRFAM Bacterial surface protein 26-residue repeat - - - 0.000000000000000000000000000003507 121.0
CMS1_k127_4864689_0 Formate/nitrite transporter K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 467.0
CMS1_k127_4864689_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 341.0
CMS1_k127_4864689_2 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.0000000000000000000000000000000000000000000000000000000000000003073 224.0
CMS1_k127_4916994_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 582.0
CMS1_k127_4916994_1 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000000000004118 138.0
CMS1_k127_4926937_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 516.0
CMS1_k127_4926937_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 351.0
CMS1_k127_4980639_0 COG1459 Type II secretory pathway, component PulF K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
CMS1_k127_4980639_1 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000002378 213.0
CMS1_k127_4980639_2 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000006532 197.0
CMS1_k127_4980639_3 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000004106 180.0
CMS1_k127_4980639_4 - - - - 0.00000000000000001161 94.0
CMS1_k127_4980639_5 - - - - 0.000000000000003734 81.0
CMS1_k127_4980639_6 proline dehydrogenase activity - - - 0.0000000002256 72.0
CMS1_k127_4980639_7 - - - - 0.0000003937 58.0
CMS1_k127_5001816_0 RNA binding S1 domain protein K06959 - - 0.0 1082.0
CMS1_k127_5001816_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 503.0
CMS1_k127_5001816_2 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006798 271.0
CMS1_k127_5001816_3 COG0242 N-formylmethionyl-tRNA deformylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002008 255.0
CMS1_k127_5001816_4 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000001322 224.0
CMS1_k127_5001816_5 - - - - 0.000000000000000000000000000000000000000000005062 169.0
CMS1_k127_5001816_7 SpoU rRNA Methylase family - - - 0.000000001476 61.0
CMS1_k127_501628_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 598.0
CMS1_k127_501628_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 533.0
CMS1_k127_501628_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 488.0
CMS1_k127_501628_3 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 475.0
CMS1_k127_501628_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 462.0
CMS1_k127_501628_5 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 401.0
CMS1_k127_501628_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000002173 234.0
CMS1_k127_501628_7 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000004645 190.0
CMS1_k127_501628_8 COG2143 Thioredoxin-related protein K04084 - 1.8.1.8 0.0000000000000000000000000000000001755 136.0
CMS1_k127_5052680_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 3.012e-236 735.0
CMS1_k127_5052680_1 COG0642 Signal transduction histidine kinase - - - 5.167e-230 728.0
CMS1_k127_5052680_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000009417 243.0
CMS1_k127_5052680_11 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000002288 221.0
CMS1_k127_5052680_12 Membrane - - - 0.00000000000000000000000000000000000000000000000000003235 193.0
CMS1_k127_5052680_13 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000006829 175.0
CMS1_k127_5052680_14 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000003088 150.0
CMS1_k127_5052680_15 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000001428 126.0
CMS1_k127_5052680_16 Cupin domain K11312 - - 0.0000000000000000000001457 100.0
CMS1_k127_5052680_17 OmpA-like transmembrane domain - - - 0.0000000000000000001077 96.0
CMS1_k127_5052680_18 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 - 0.0000000001102 61.0
CMS1_k127_5052680_2 fructose-bisphosphate aldolase K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 581.0
CMS1_k127_5052680_3 4Fe-4S ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 437.0
CMS1_k127_5052680_4 5'-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 411.0
CMS1_k127_5052680_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 351.0
CMS1_k127_5052680_6 Dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 351.0
CMS1_k127_5052680_7 COG1252 NADH dehydrogenase FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 349.0
CMS1_k127_5052680_8 peptidylprolyl isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 321.0
CMS1_k127_5052680_9 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 289.0
CMS1_k127_5057883_0 lytic murein transglycosylase K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 368.0
CMS1_k127_5057883_1 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002395 264.0
CMS1_k127_5057883_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000006813 161.0
CMS1_k127_5070599_0 membrane K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 380.0
CMS1_k127_5070599_1 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000000000000000003774 235.0
CMS1_k127_5070599_2 hmm pf01205 - - - 0.00000000000000000000000000000000000000000000000000000000001629 211.0
CMS1_k127_5070599_3 Bacterial protein of unknown function (YtfJ_HI0045) K07109 - - 0.0000000000000000000000000000000000000000000000006601 180.0
CMS1_k127_5070599_4 amine dehydrogenase activity - - - 0.0000000000001512 77.0
CMS1_k127_507104_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1084.0
CMS1_k127_507104_1 His Kinase A (phosphoacceptor) domain - - - 3.79e-241 763.0
CMS1_k127_507104_10 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000031 140.0
CMS1_k127_507104_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03212,K03215 - 2.1.1.189,2.1.1.190,2.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 440.0
CMS1_k127_507104_3 Two-component sensor histidine kinase response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 396.0
CMS1_k127_507104_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 369.0
CMS1_k127_507104_5 signal transduction response regulator (GGDEF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 372.0
CMS1_k127_507104_6 PAS domain K03776 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 286.0
CMS1_k127_507104_7 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005828 252.0
CMS1_k127_507104_9 response to abiotic stimulus K21439 - - 0.00000000000000000000000000000000000001118 149.0
CMS1_k127_5089042_0 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 454.0
CMS1_k127_5089042_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 381.0
CMS1_k127_5089042_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 320.0
CMS1_k127_5089042_3 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 321.0
CMS1_k127_5089042_4 Uncharacterised protein family (UPF0153) K06940 - - 0.000000000000000000000000000000000000000000000000000193 187.0
CMS1_k127_5089042_5 chlorophyll binding - - - 0.00000000000000000000000000000000000002069 152.0
CMS1_k127_5089042_6 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000001207 137.0
CMS1_k127_5089042_7 - - - - 0.0000000000000000000000000000003122 129.0
CMS1_k127_5089042_8 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000465 119.0
CMS1_k127_5089042_9 PFAM PKD domain containing protein - - - 0.0000000000000002022 88.0
CMS1_k127_5147456_0 peptidase U32 family K08303 - - 1.457e-230 720.0
CMS1_k127_5147456_1 histidinol phosphate phosphatase K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 386.0
CMS1_k127_5147456_2 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 382.0
CMS1_k127_5147456_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001725 280.0
CMS1_k127_5147456_4 Surface antigen - - - 0.0000000000000000000000000000000000000000000000155 187.0
CMS1_k127_5147456_5 PFAM small multidrug resistance protein K03297 - - 0.00000000000000000000000000000000000000000007247 162.0
CMS1_k127_5147456_6 Protein of unknown function (DUF1295) - - - 0.0000000000000000000000000000000006751 135.0
CMS1_k127_5147456_7 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000004911 102.0
CMS1_k127_5147456_8 Evidence 5 No homology to any previously reported sequences K09607 - - 0.00000001246 60.0
CMS1_k127_5147456_9 peptidase activity, acting on L-amino acid peptides K09607 - - 0.00000004434 59.0
CMS1_k127_5234123_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1808.0
CMS1_k127_5234123_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 4.943e-320 984.0
CMS1_k127_5234123_10 Co-chaperone-curved DNA binding protein A K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 422.0
CMS1_k127_5234123_11 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034,K12370 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 396.0
CMS1_k127_5234123_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 373.0
CMS1_k127_5234123_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 334.0
CMS1_k127_5234123_14 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 313.0
CMS1_k127_5234123_15 AI-2E family transporter K11744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 312.0
CMS1_k127_5234123_16 Rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 297.0
CMS1_k127_5234123_17 dna polymerase iii K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 291.0
CMS1_k127_5234123_18 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000345 283.0
CMS1_k127_5234123_19 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000001079 245.0
CMS1_k127_5234123_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 1.23e-238 751.0
CMS1_k127_5234123_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000008748 232.0
CMS1_k127_5234123_21 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000002546 231.0
CMS1_k127_5234123_22 Dystroglycan-type cadherin-like domains. - - - 0.000000000000000000000000000000000000000000000000000001374 220.0
CMS1_k127_5234123_23 Transcriptional regulator K13640 - - 0.00000000000000000000000000000000000000000000000000002406 190.0
CMS1_k127_5234123_24 - - - - 0.000000000000000000000000000000000000000000000000003197 185.0
CMS1_k127_5234123_25 integral membrane protein - - - 0.00000000000000000000000000000000000000000001255 171.0
CMS1_k127_5234123_26 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000006756 149.0
CMS1_k127_5234123_27 membrane - - - 0.00000000000000000000000000000000000000169 149.0
CMS1_k127_5234123_28 L-threonylcarbamoyladenylate synthase - - - 0.0000000000000000000000000000000002202 138.0
CMS1_k127_5234123_29 Belongs to the peptidase S41A family - - - 0.000000000000000000000000000000006133 143.0
CMS1_k127_5234123_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 6.547e-223 695.0
CMS1_k127_5234123_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 3.229e-205 646.0
CMS1_k127_5234123_5 Glutathionylspermidine synthase - - - 1.046e-194 612.0
CMS1_k127_5234123_6 rod shape-determining protein mreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 600.0
CMS1_k127_5234123_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 566.0
CMS1_k127_5234123_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 439.0
CMS1_k127_5234123_9 outer membrane porin, OprD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 447.0
CMS1_k127_5240745_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.628e-253 788.0
CMS1_k127_5240745_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 5.742e-247 777.0
CMS1_k127_5240745_2 COG1055 Na H antiporter NhaD and related arsenite - - - 3.06e-217 683.0
CMS1_k127_5240745_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.597e-214 675.0
CMS1_k127_5240745_4 - - - - 0.0000000000000000000000000000004748 127.0
CMS1_k127_5241208_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 574.0
CMS1_k127_5241208_1 COG0402 Cytosine deaminase and related metal-dependent K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 509.0
CMS1_k127_5241208_2 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 382.0
CMS1_k127_5241208_3 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 361.0
CMS1_k127_5241208_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 341.0
CMS1_k127_5241208_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000879 265.0
CMS1_k127_5241208_6 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000002195 183.0
CMS1_k127_5241208_7 Ester cyclase - - - 0.00000000000000000000000000000000007597 137.0
CMS1_k127_530340_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 1.378e-290 905.0
CMS1_k127_530340_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 356.0
CMS1_k127_530340_2 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000001199 154.0
CMS1_k127_5323217_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 419.0
CMS1_k127_5323217_1 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 406.0
CMS1_k127_5323217_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 313.0
CMS1_k127_5323217_3 Sugar-transfer associated ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001967 253.0
CMS1_k127_5323217_4 TPR repeat - - - 0.00000000000000000000000000002031 136.0
CMS1_k127_5323217_5 Tetratricopeptide repeat - - - 0.0000000000000000000005547 110.0
CMS1_k127_5323217_6 - - - - 0.0000000000001934 77.0
CMS1_k127_5323217_7 Protein of unknown function (DUF1294) - - - 0.00000000001986 69.0
CMS1_k127_5323217_8 - - - - 0.000000004788 59.0
CMS1_k127_5349398_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1040.0
CMS1_k127_5349398_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 524.0
CMS1_k127_5349398_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 438.0
CMS1_k127_5349398_3 transformation system protein K02242 - - 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
CMS1_k127_5349398_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000002747 61.0
CMS1_k127_539624_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 6.868e-213 666.0
CMS1_k127_539624_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 520.0
CMS1_k127_539624_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 470.0
CMS1_k127_539624_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 414.0
CMS1_k127_539624_4 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000003807 215.0
CMS1_k127_539624_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000001949 128.0
CMS1_k127_539624_6 DNA replication regulator - - - 0.0000000000003223 70.0
CMS1_k127_539624_7 DNA processing protein K04096 - - 0.00000000001412 66.0
CMS1_k127_5407191_0 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 1.261e-309 953.0
CMS1_k127_5407191_1 phosphorylase kinase alphabeta K07190 - - 1.62e-289 904.0
CMS1_k127_5407191_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 607.0
CMS1_k127_5407191_3 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 489.0
CMS1_k127_5407191_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000113 198.0
CMS1_k127_5413287_0 Oxidoreductase K06151 - 1.1.99.3 7.212e-247 774.0
CMS1_k127_5413287_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 377.0
CMS1_k127_5413287_2 G T U mismatch-specific DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000000000505 194.0
CMS1_k127_5413287_3 hmm pf01863 K07043 - - 0.000000000000000000000000000000000000002635 154.0
CMS1_k127_5413287_4 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000001213 103.0
CMS1_k127_5413287_5 - - - - 0.000001109 56.0
CMS1_k127_5413287_6 homolog subfamily A member K09504 GO:0002119,GO:0002164,GO:0003674,GO:0005102,GO:0005113,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006457,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0008150,GO:0009790,GO:0009791,GO:0009792,GO:0009987,GO:0016043,GO:0023052,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051716,GO:0065007,GO:0071840 - 0.000004126 54.0
CMS1_k127_5425286_0 redox protein, regulator of disulfide bond formation K09136 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047429,GO:0047693,GO:0071704,GO:1901564 - 3.674e-237 747.0
CMS1_k127_5425286_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.033e-225 711.0
CMS1_k127_5425286_10 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 315.0
CMS1_k127_5425286_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 319.0
CMS1_k127_5425286_12 Pseudouridine synthase K06177,K06179,K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 309.0
CMS1_k127_5425286_14 abc transporter atp-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000002476 208.0
CMS1_k127_5425286_15 SpoIIAA-like - - - 0.000000000000000000000000000000000005328 139.0
CMS1_k127_5425286_16 - - - - 0.0000000000000000000000000000693 120.0
CMS1_k127_5425286_17 DNA-binding protein VF530 - - - 0.0000000000000000000000001206 108.0
CMS1_k127_5425286_18 Tryptophan halogenase - - - 0.0000000000000000000000167 102.0
CMS1_k127_5425286_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 589.0
CMS1_k127_5425286_3 conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 512.0
CMS1_k127_5425286_4 Inorganic pyrophosphatase K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 491.0
CMS1_k127_5425286_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 468.0
CMS1_k127_5425286_6 Ecdysteroid kinase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 448.0
CMS1_k127_5425286_7 Glutaminase K01425 GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0040008,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0045926,GO:0046394,GO:0046395,GO:0048519,GO:0050789,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 442.0
CMS1_k127_5425286_8 diguanylate cyclase K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 333.0
CMS1_k127_5425286_9 Anhydro-N-acetylmuramic acid kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 330.0
CMS1_k127_5443553_0 Cysteine desulfurase K04487 - 2.8.1.7 1.06e-227 708.0
CMS1_k127_5443553_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 541.0
CMS1_k127_5443553_2 Flotillin K07192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 468.0
CMS1_k127_5443553_3 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 456.0
CMS1_k127_5443553_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 350.0
CMS1_k127_5443553_5 Pfam:Cache_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005378 284.0
CMS1_k127_5443553_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000002821 224.0
CMS1_k127_5460605_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 2.791e-303 947.0
CMS1_k127_5460605_1 COGs COG1252 NADH dehydrogenase FAD-containing subunit K17218 - 1.8.5.4 0.00000000000000000000000000000000002335 136.0
CMS1_k127_5483719_0 cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1044.0
CMS1_k127_5483719_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.347e-242 753.0
CMS1_k127_5483719_10 Cytochrome oxidase maturation protein - - - 0.000000000000000000989 89.0
CMS1_k127_5483719_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.836e-220 698.0
CMS1_k127_5483719_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0003674,GO:0005488,GO:0005515,GO:0042802 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 364.0
CMS1_k127_5483719_4 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 306.0
CMS1_k127_5483719_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 299.0
CMS1_k127_5483719_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000006975 225.0
CMS1_k127_5483719_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000000004134 152.0
CMS1_k127_5483719_8 GlutRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.00000000000000000000000000000000000000004854 157.0
CMS1_k127_5483719_9 peptide-methionine (S)-S-oxide reductase activity - - - 0.00000000000000000000001014 103.0
CMS1_k127_5486655_0 Peptidase s1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 479.0
CMS1_k127_5486655_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 407.0
CMS1_k127_5486655_2 PFAM Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 320.0
CMS1_k127_5486655_3 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000000000000000000000000001507 167.0
CMS1_k127_5486655_4 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000006248 151.0
CMS1_k127_5530468_0 cell adhesion involved in biofilm formation K12287 - - 1.814e-286 911.0
CMS1_k127_5530468_1 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 360.0
CMS1_k127_5530468_2 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 336.0
CMS1_k127_5546872_0 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase K15022 - 1.17.1.10 0.0 1174.0
CMS1_k127_5546872_1 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1052.0
CMS1_k127_5546872_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 466.0
CMS1_k127_5546872_3 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000007618 201.0
CMS1_k127_5546872_4 putative NADH-ubiquinone oxidoreductase chain E K00334 - 1.6.5.3 0.0000000000000000000000000000000001894 132.0
CMS1_k127_5591810_0 dihydropteroate synthase K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 460.0
CMS1_k127_5591810_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 338.0
CMS1_k127_5591810_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001902 258.0
CMS1_k127_5591810_3 Belongs to the MsrB Met sulfoxide reductase family K07305,K12267 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0030091,GO:0033743,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:1901564 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000002678 204.0
CMS1_k127_5591810_4 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000008242 199.0
CMS1_k127_5591810_5 - - - - 0.00000000000000000000000000000000000000000000000000029 192.0
CMS1_k127_5591810_6 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000001617 163.0
CMS1_k127_5591810_7 DNA replication regulator - - - 0.00000000000000000000000000000000000000000005537 162.0
CMS1_k127_5591810_8 Dipeptidase K01270 - - 0.0000000000000000000000000000007299 124.0
CMS1_k127_5591810_9 - - - - 0.000000000000000000001165 98.0
CMS1_k127_5593477_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K03581 - 3.1.11.5 8.848e-259 808.0
CMS1_k127_5593477_1 Cytochrome K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 483.0
CMS1_k127_5593477_10 - - - - 0.0000000000000003546 79.0
CMS1_k127_5593477_2 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 457.0
CMS1_k127_5593477_3 Histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 394.0
CMS1_k127_5593477_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001496 256.0
CMS1_k127_5593477_5 COGs COG3786 conserved - - - 0.000000000000000000000000000000000000000000000000000000000007049 214.0
CMS1_k127_5593477_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000003545 161.0
CMS1_k127_5593477_7 Belongs to the Fur family K09825 - - 0.00000000000000000000000000000000000000004089 155.0
CMS1_k127_5593477_8 epimerase - - - 0.0000000000000000000000000000003707 132.0
CMS1_k127_5593477_9 Cytochrome c553 K08738 - - 0.00000000000000000000000004253 109.0
CMS1_k127_5607513_0 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.0 1684.0
CMS1_k127_5607513_1 Ferredoxin-type protein, NapH MauN family K02574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 474.0
CMS1_k127_5607513_2 TIGRFAM MauM NapG family ferredoxin-type protein K02573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 461.0
CMS1_k127_5607513_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 380.0
CMS1_k127_5607513_4 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004387 282.0
CMS1_k127_5607513_5 ferredoxin-type protein NapF K02572 - - 0.000000000000000000000000000000000000000000000000000000000001459 214.0
CMS1_k127_5607513_6 PAS domain K03776 - - 0.0000000000000000000000000001639 117.0
CMS1_k127_5612090_0 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 359.0
CMS1_k127_5612090_1 Ribonuclease K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000181 254.0
CMS1_k127_5621524_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1022.0
CMS1_k127_5621524_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 407.0
CMS1_k127_5621524_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 337.0
CMS1_k127_5621524_3 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001999 250.0
CMS1_k127_5621524_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006155 250.0
CMS1_k127_5621524_5 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000159 232.0
CMS1_k127_5621524_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000006626 215.0
CMS1_k127_5621524_7 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000008351 206.0
CMS1_k127_5621524_8 WHG domain - - - 0.0000000000000000002893 91.0
CMS1_k127_5621524_9 COG1309 Transcriptional regulator - - - 0.0000000000000000664 88.0
CMS1_k127_5648540_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.12e-241 754.0
CMS1_k127_5648540_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 550.0
CMS1_k127_5648540_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 509.0
CMS1_k127_5648540_3 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 416.0
CMS1_k127_5648540_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 356.0
CMS1_k127_5648540_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000007981 136.0
CMS1_k127_565221_0 ABC transporter, ATP-binding protein K15738 - - 4.08e-307 952.0
CMS1_k127_565221_1 Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 548.0
CMS1_k127_565221_2 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 347.0
CMS1_k127_565221_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000001392 202.0
CMS1_k127_565221_4 Stress responsive A B Barrel Domain - - - 0.0000000000000000000000000000004643 124.0
CMS1_k127_565221_5 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000001141 121.0
CMS1_k127_565221_6 - - - - 0.00000000000000004 84.0
CMS1_k127_565221_7 - - - - 0.000000000001478 69.0
CMS1_k127_565221_8 - - - - 0.0000005633 57.0
CMS1_k127_5656333_0 Mate efflux family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 380.0
CMS1_k127_5656333_1 Desulfoferrodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000003843 221.0
CMS1_k127_5656333_2 COG0433 Predicted ATPase - - - 0.000000000000000000000000000000000000000000000000000000004894 201.0
CMS1_k127_5656333_3 - - - - 0.0000000000000000000000000000000000000002402 155.0
CMS1_k127_5693888_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 514.0
CMS1_k127_5693888_1 COGs COG3864 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 370.0
CMS1_k127_5693888_2 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 352.0
CMS1_k127_5693888_3 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002071 280.0
CMS1_k127_5693888_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000001998 240.0
CMS1_k127_5706188_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1137.0
CMS1_k127_5706188_1 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 547.0
CMS1_k127_5706188_10 LPP20 lipoprotein - - - 0.0000000000003131 77.0
CMS1_k127_5706188_2 pyridine nucleotide-disulfide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 477.0
CMS1_k127_5706188_3 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 485.0
CMS1_k127_5706188_4 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 441.0
CMS1_k127_5706188_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 409.0
CMS1_k127_5706188_6 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001637 248.0
CMS1_k127_5706188_7 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000344 219.0
CMS1_k127_5706188_9 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.0000000000000000582 91.0
CMS1_k127_5729934_0 Putative metallopeptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 473.0
CMS1_k127_5729934_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 284.0
CMS1_k127_5729934_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002446 248.0
CMS1_k127_5729934_3 beta-lactamase activity K07126 - - 0.000000000000000000000000000000000000000000000000000002951 200.0
CMS1_k127_5729934_4 - - - - 0.000000000000000000000000000000000000000000000000002403 186.0
CMS1_k127_5729934_5 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000727 143.0
CMS1_k127_5729934_6 Belongs to the ArsC family - - - 0.00000000000000000000000000000000007935 138.0
CMS1_k127_5729934_7 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000004584 111.0
CMS1_k127_5757_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1392.0
CMS1_k127_5757_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1277.0
CMS1_k127_5757_10 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000008785 228.0
CMS1_k127_5757_11 - - - - 0.000000000000000000000000000000000000000000000000001718 184.0
CMS1_k127_5757_12 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000000008303 179.0
CMS1_k127_5757_13 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000005326 164.0
CMS1_k127_5757_14 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000153 108.0
CMS1_k127_5757_2 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 608.0
CMS1_k127_5757_3 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 438.0
CMS1_k127_5757_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 415.0
CMS1_k127_5757_5 metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 396.0
CMS1_k127_5757_6 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 330.0
CMS1_k127_5757_7 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002085 283.0
CMS1_k127_5757_8 endonuclease III K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009059 245.0
CMS1_k127_5757_9 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003279 229.0
CMS1_k127_5767108_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1287.0
CMS1_k127_5767108_1 Ribonuclease K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 580.0
CMS1_k127_5767108_10 Sel1-like repeats. K07126 - - 0.000002069 59.0
CMS1_k127_5767108_2 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 374.0
CMS1_k127_5767108_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007552 246.0
CMS1_k127_5767108_4 Cupin domain - - - 0.000000000000000000000000000000000000000000000000001549 186.0
CMS1_k127_5767108_5 COG0760 Parvulin-like peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000132 145.0
CMS1_k127_5767108_6 - - - - 0.000000000000000000000000000000000005038 139.0
CMS1_k127_5767108_7 Fatty acid desaturase - - - 0.00000000000000000000000000000004239 138.0
CMS1_k127_5767108_8 Transcriptional regulator - - - 0.000000000000000000000000002746 115.0
CMS1_k127_5767108_9 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.000000000000000000006924 93.0
CMS1_k127_5770704_0 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 445.0
CMS1_k127_5770704_1 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000002276 234.0
CMS1_k127_5770704_2 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0000000000000000000000000000000000000000001932 165.0
CMS1_k127_5770704_3 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000000000153 125.0
CMS1_k127_5782204_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 594.0
CMS1_k127_5782204_1 general secretion pathway protein D K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 440.0
CMS1_k127_5782204_2 Prokaryotic N-terminal methylation motif - - - 0.0001189 50.0
CMS1_k127_5782204_3 PDZ domain (Also known as DHR or GLGF) - GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0006143 51.0
CMS1_k127_5806167_0 4Fe-4S dicluster domain K07307 - - 7.363e-234 733.0
CMS1_k127_5806167_1 COG2223 Nitrate nitrite transporter K02575 - - 1.634e-228 713.0
CMS1_k127_5806167_2 COG0631 Serine threonine protein phosphatase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 359.0
CMS1_k127_5806167_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00367,K00372,K08356 - 1.20.2.1,1.20.9.1,1.7.7.2 0.00000000000000000000000002145 108.0
CMS1_k127_5821854_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1050.0
CMS1_k127_5821854_1 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 527.0
CMS1_k127_5821854_10 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 299.0
CMS1_k127_5821854_11 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 304.0
CMS1_k127_5821854_12 Formylmethanofuran dehydrogenase, subunit e - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004412 259.0
CMS1_k127_5821854_13 COG1214 Inactive homolog of metal-dependent proteases - - - 0.000000000000000000000000000000000000000000000000000005277 194.0
CMS1_k127_5821854_14 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000002417 181.0
CMS1_k127_5821854_15 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000000000000000006937 130.0
CMS1_k127_5821854_16 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000005823 122.0
CMS1_k127_5821854_17 nucleic-acid-binding protein implicated in transcription termination - - - 0.000000000000000832 80.0
CMS1_k127_5821854_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 509.0
CMS1_k127_5821854_3 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 499.0
CMS1_k127_5821854_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 496.0
CMS1_k127_5821854_5 Sodium calcium exchanger membrane K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 489.0
CMS1_k127_5821854_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 479.0
CMS1_k127_5821854_7 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 468.0
CMS1_k127_5821854_8 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 380.0
CMS1_k127_5821854_9 riboflavin biosynthesis protein K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 367.0
CMS1_k127_5860079_0 Sulfate permease K03321 - - 4.944e-238 747.0
CMS1_k127_5860079_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.718e-224 703.0
CMS1_k127_5860079_2 Magnesium transport protein CorA K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 430.0
CMS1_k127_5860079_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 342.0
CMS1_k127_5860079_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 285.0
CMS1_k127_5860079_5 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000002416 176.0
CMS1_k127_5860079_6 Domain of unknown function (DUF4136) - - - 0.0000000003651 68.0
CMS1_k127_586999_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 5.633e-207 647.0
CMS1_k127_586999_1 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 445.0
CMS1_k127_586999_2 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000004283 262.0
CMS1_k127_586999_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000001248 211.0
CMS1_k127_586999_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000007124 172.0
CMS1_k127_586999_6 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000171 103.0
CMS1_k127_5878245_0 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 604.0
CMS1_k127_5878245_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 511.0
CMS1_k127_5878245_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000444 171.0
CMS1_k127_5900063_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1082.0
CMS1_k127_5900063_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 508.0
CMS1_k127_5900063_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 309.0
CMS1_k127_5900063_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001219 261.0
CMS1_k127_5900063_7 Cytochrome c553 K08738 - - 0.000000001775 61.0
CMS1_k127_5900063_8 PFAM regulatory protein LuxR - - - 0.00006085 53.0
CMS1_k127_5900248_0 Cytochrome c554 and c-prime - - - 1.101e-282 887.0
CMS1_k127_5900248_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0005488,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 567.0
CMS1_k127_5900248_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 452.0
CMS1_k127_5900248_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 338.0
CMS1_k127_5900248_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000007921 241.0
CMS1_k127_5900248_5 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000001183 195.0
CMS1_k127_5900248_6 tetratricopeptide repeat - - - 0.000000008589 59.0
CMS1_k127_5923836_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 1.742e-268 837.0
CMS1_k127_5923836_1 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 503.0
CMS1_k127_5923836_10 Receptor K02014 - - 0.000007294 54.0
CMS1_k127_5923836_2 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 362.0
CMS1_k127_5923836_3 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000001223 212.0
CMS1_k127_5923836_4 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000008674 203.0
CMS1_k127_5923836_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000001132 183.0
CMS1_k127_5923836_6 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000001803 132.0
CMS1_k127_5923836_7 COG1393 Arsenate reductase and related K00537 - 1.20.4.1 0.000000000000000000000000000000001485 133.0
CMS1_k127_5923836_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000005079 109.0
CMS1_k127_5923836_9 Polysaccharide biosynthesis protein - - - 0.000000000000000002797 84.0
CMS1_k127_5930409_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 587.0
CMS1_k127_5930409_1 ABC transporter K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 579.0
CMS1_k127_5930409_10 Chorismate mutase K04782 - 4.2.99.21 0.00000000000000000000000000000001721 129.0
CMS1_k127_5930409_11 Protein conserved in bacteria K09764 - - 0.00000000000000003315 85.0
CMS1_k127_5930409_2 PFAM NADH ubiquinone oxidoreductase, 20 Kd subunit K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009637 370.0
CMS1_k127_5930409_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 331.0
CMS1_k127_5930409_4 PFAM Alpha Beta hydrolase K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 301.0
CMS1_k127_5930409_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 291.0
CMS1_k127_5930409_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000023 238.0
CMS1_k127_5930409_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000002413 202.0
CMS1_k127_5930409_8 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000000000000000004666 160.0
CMS1_k127_5930409_9 2'-5' RNA ligase K01975 - 3.1.4.58 0.000000000000000000000000000000001422 137.0
CMS1_k127_5935337_0 Receptor - - - 1.124e-241 754.0
CMS1_k127_5935337_1 - K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 596.0
CMS1_k127_5935337_2 Transcriptional regulator, ModE family K02019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 324.0
CMS1_k127_5935337_3 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 310.0
CMS1_k127_5935337_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000001131 139.0
CMS1_k127_5970474_0 Abc transporter K06158 - - 2.079e-259 808.0
CMS1_k127_5970474_1 COG4886 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 566.0
CMS1_k127_5990269_0 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 528.0
CMS1_k127_5990269_1 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 481.0
CMS1_k127_5990269_2 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000006967 143.0
CMS1_k127_6017410_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 6.778e-251 778.0
CMS1_k127_6017410_1 Radical SAM protein K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 544.0
CMS1_k127_6017410_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 535.0
CMS1_k127_6017410_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 428.0
CMS1_k127_6017410_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 393.0
CMS1_k127_6017410_5 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 394.0
CMS1_k127_6032981_0 GTP-binding protein K06207 - - 0.0 1052.0
CMS1_k127_6032981_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 598.0
CMS1_k127_6032981_2 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 491.0
CMS1_k127_6032981_3 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003004 261.0
CMS1_k127_6032981_4 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000001995 243.0
CMS1_k127_6032981_5 RDD family - - - 0.0000000000000000000000000000001809 128.0
CMS1_k127_606474_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1065.0
CMS1_k127_606474_1 - - - - 0.0000000000000002716 81.0
CMS1_k127_6086985_0 Oligosaccharide transferase K07151 - 2.4.99.18 1.343e-230 733.0
CMS1_k127_6086985_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 317.0
CMS1_k127_6086985_2 Glycosyl transferase family 2 K07011 - - 0.000000000000000000001947 95.0
CMS1_k127_6146975_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 3.343e-209 660.0
CMS1_k127_6146975_1 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 570.0
CMS1_k127_6146975_10 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000005841 155.0
CMS1_k127_6146975_2 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 488.0
CMS1_k127_6146975_3 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 481.0
CMS1_k127_6146975_4 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 465.0
CMS1_k127_6146975_5 polyphosphate kinase K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 436.0
CMS1_k127_6146975_6 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 393.0
CMS1_k127_6146975_7 CorA-like Mg2 transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 330.0
CMS1_k127_6146975_8 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002643 264.0
CMS1_k127_6146975_9 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000000000000000000000000003561 205.0
CMS1_k127_614964_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 4.111e-318 989.0
CMS1_k127_614964_1 Histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 576.0
CMS1_k127_614964_10 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000002632 178.0
CMS1_k127_614964_11 Ferredoxin K05337 - - 0.000000000000000000000000000000000000000007704 154.0
CMS1_k127_614964_12 - - - - 0.000000000000000000000000002864 115.0
CMS1_k127_614964_13 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000002959 115.0
CMS1_k127_614964_14 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00001275 47.0
CMS1_k127_614964_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 550.0
CMS1_k127_614964_3 Guanosine pentaphosphate phosphohydrolase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 450.0
CMS1_k127_614964_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 426.0
CMS1_k127_614964_5 prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008121 351.0
CMS1_k127_614964_6 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 362.0
CMS1_k127_614964_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009343 305.0
CMS1_k127_614964_8 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 306.0
CMS1_k127_614964_9 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000000000006619 219.0
CMS1_k127_6159488_0 Nitrogenase cofactor biosynthesis protein NifB K02585 - - 4.587e-267 826.0
CMS1_k127_6159488_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.883e-219 686.0
CMS1_k127_6159488_10 Rop-like - - - 0.00000000000000000006856 91.0
CMS1_k127_6159488_2 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 581.0
CMS1_k127_6159488_3 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 552.0
CMS1_k127_6159488_4 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 541.0
CMS1_k127_6159488_5 COG4886 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 496.0
CMS1_k127_6159488_6 SIR2-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 443.0
CMS1_k127_6159488_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 330.0
CMS1_k127_6159488_8 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000008693 196.0
CMS1_k127_6159488_9 - - - - 0.00000000000000000000000000000000003363 135.0
CMS1_k127_6167280_0 acetolactate synthase K01652 - 2.2.1.6 8.387e-197 617.0
CMS1_k127_6167280_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 382.0
CMS1_k127_6167280_2 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000004817 227.0
CMS1_k127_6167280_3 - - - - 0.000000000000000000000001011 104.0
CMS1_k127_6194051_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 358.0
CMS1_k127_6194051_1 PFAM Bacterial transcription activator, effector binding domain K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 326.0
CMS1_k127_6194051_2 2-keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002836 237.0
CMS1_k127_6194051_3 - - - - 0.0000000000000000000000000000000000001036 149.0
CMS1_k127_6194051_4 - - - - 0.00000006091 59.0
CMS1_k127_6195620_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 1.664e-201 634.0
CMS1_k127_6195620_1 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 477.0
CMS1_k127_6195620_2 competence protein K02237 - - 0.000000000000001741 78.0
CMS1_k127_623069_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 329.0
CMS1_k127_623069_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000792 246.0
CMS1_k127_6232203_0 transmembrane signaling receptor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 419.0
CMS1_k127_6232203_1 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 362.0
CMS1_k127_6232203_2 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000000000000000000000000000000003124 232.0
CMS1_k127_6232203_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000007855 218.0
CMS1_k127_62591_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1197.0
CMS1_k127_62591_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.221e-215 679.0
CMS1_k127_62591_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 476.0
CMS1_k127_62591_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000137 267.0
CMS1_k127_62591_4 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000005955 136.0
CMS1_k127_651570_0 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 295.0
CMS1_k127_651570_1 Hydrogenase K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 280.0
CMS1_k127_651570_2 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002732 250.0
CMS1_k127_651570_3 hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000001653 231.0
CMS1_k127_651570_4 sensor protein - - - 0.0000000000000000000000000000000000001455 149.0
CMS1_k127_651570_5 Predicted membrane protein (DUF2061) - - - 0.0000000000000000000000000000000006291 132.0
CMS1_k127_651570_7 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000002692 77.0
CMS1_k127_66267_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1230.0
CMS1_k127_66267_1 Cytochrome c biogenesis protein - - - 2.991e-250 793.0
CMS1_k127_66267_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 405.0
CMS1_k127_66267_3 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 300.0
CMS1_k127_66267_4 Domain of unknown function (DUF4405) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003317 238.0
CMS1_k127_66267_5 - - - - 0.00000000000000000000000000000001333 126.0
CMS1_k127_700319_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1793.0
CMS1_k127_700319_1 Circularly permuted ATP-grasp type 2 - - - 2.157e-305 956.0
CMS1_k127_700319_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 437.0
CMS1_k127_700319_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 410.0
CMS1_k127_700319_4 Bacterial transglutaminase-like N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000104 277.0
CMS1_k127_700319_5 PFAM Archaea bacterial proteins of K06921 - - 0.000000000000000000000000001648 114.0
CMS1_k127_701835_0 PFAM amine oxidase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 360.0
CMS1_k127_701835_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 352.0
CMS1_k127_701835_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 315.0
CMS1_k127_701835_3 phosphoribosyltransferase K00769 - 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000001578 246.0
CMS1_k127_701835_4 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000004124 237.0
CMS1_k127_701835_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000006415 199.0
CMS1_k127_701835_6 Thiopurine S-methyltransferase (TPMT) - - - 0.00000000000000000000000000000000000000008416 159.0
CMS1_k127_701835_7 - - - - 0.0008605 49.0
CMS1_k127_80338_0 Highly conserved protein containing a thioredoxin domain K06888 - - 2.979e-254 800.0
CMS1_k127_80338_1 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 595.0
CMS1_k127_80338_2 polyphosphate kinase K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 313.0
CMS1_k127_80338_3 Belongs to the DegT DnrJ EryC1 family K13017 - 2.6.1.98 0.00000000000000000000000008827 111.0
CMS1_k127_80338_4 Protein of unknown function, DUF255 - - - 0.0000000000000000000000009095 108.0
CMS1_k127_815342_0 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 302.0
CMS1_k127_815342_1 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000000000000000000000000005251 224.0
CMS1_k127_815342_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000754 202.0
CMS1_k127_815342_3 Phosphopantetheine attachment site - - - 0.000000000000000000000001158 106.0
CMS1_k127_849423_0 DNA helicase K03657 - 3.6.4.12 0.0 1069.0
CMS1_k127_849423_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 487.0
CMS1_k127_849423_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 375.0
CMS1_k127_849423_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 375.0
CMS1_k127_849423_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 310.0
CMS1_k127_899380_0 potassium channel protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 494.0
CMS1_k127_899380_1 TrkA-N domain K10716 - - 0.0000000000000000002923 92.0
CMS1_k127_916757_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00367,K00372,K08356 - 1.20.2.1,1.20.9.1,1.7.7.2 0.0 1193.0
CMS1_k127_916757_1 with different specificities (related to short-chain alcohol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001252 280.0
CMS1_k127_916757_2 Membrane K08984 - - 0.000000000000000000000000000000000000132 148.0
CMS1_k127_916757_3 Transglycosylase associated protein - - - 0.000000000000000000000000000006972 121.0
CMS1_k127_916757_4 Protein of unknown function (DUF3185) - - - 0.00000000000000000000000000263 112.0
CMS1_k127_916757_5 - - - - 0.000000000003539 71.0
CMS1_k127_949370_0 DNA helicase K03657 - 3.6.4.12 0.0 1031.0
CMS1_k127_949370_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 443.0
CMS1_k127_956826_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.209e-250 782.0
CMS1_k127_956826_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 432.0
CMS1_k127_956826_2 Preprotein translocase K03210 - - 0.0000000000000000000000009662 106.0
CMS1_k127_957745_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 5.814e-248 776.0
CMS1_k127_957745_1 Pfam Sulfatase K01130 - 3.1.6.1 6.276e-239 742.0
CMS1_k127_957745_2 Transcriptional Regulator, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002311 255.0
CMS1_k127_957745_3 - - - - 0.000000000000000001558 87.0
CMS1_k127_957745_4 Quinohemoprotein amine dehydrogenase, alpha subunit domain II K08685 - 1.4.9.1 0.0005285 46.0
CMS1_k127_960785_0 Cell division protein FtsI penicillin-binding protein K03587 - 3.4.16.4 1.038e-209 668.0
CMS1_k127_960785_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 573.0
CMS1_k127_960785_2 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 516.0
CMS1_k127_960785_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 371.0
CMS1_k127_960785_4 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 306.0
CMS1_k127_960785_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000002043 228.0
CMS1_k127_960785_6 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000000000000000000000000000000000000005877 160.0
CMS1_k127_960785_7 Resolvase, N terminal domain - - - 0.000000000000000000000000000000008353 136.0
CMS1_k127_971459_0 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 535.0
CMS1_k127_971459_1 Major Facilitator Superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 377.0
CMS1_k127_99238_0 FGGY family of carbohydrate kinases, N-terminal domain K11216 - 2.7.1.189 8.268e-212 670.0
CMS1_k127_99238_1 pyruvate ferredoxin oxidoreductase K00170 - 1.2.7.1 1.236e-194 608.0
CMS1_k127_99238_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 400.0
CMS1_k127_99238_3 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000002257 181.0
CMS1_k127_99238_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000003262 150.0
CMS1_k127_99238_5 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000827 66.0
CMS1_k127_99238_6 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 0.00000000003666 63.0
CMS1_k127_994558_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1024.0
CMS1_k127_994558_2 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 0.00000001269 56.0
CMS1_k127_994558_3 - - - - 0.00000002354 55.0