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Overview

ID MAG00359
Name CMS1_bin.41
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobacteria
Order Desulfobacterales
Family Desulfosarcinaceae
Genus JARRKU01
Species
Assembly information
Completeness (%) 88.08
Contamination (%) 6.22
GC content (%) 54.0
N50 (bp) 8,592
Genome size (bp) 6,018,143

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes5503

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1007416_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.92e-280 882.0
CMS1_k127_1007416_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 394.0
CMS1_k127_1007416_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000003548 114.0
CMS1_k127_1007416_3 FeoA K04758 - - 0.0000000000000000000001277 100.0
CMS1_k127_1008846_0 PFAM thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000000000000000000000003646 204.0
CMS1_k127_1008846_1 Radical SAM superfamily - - - 0.000000002068 59.0
CMS1_k127_1012583_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 1.385e-257 829.0
CMS1_k127_1015667_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 3.266e-276 862.0
CMS1_k127_1015667_1 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 1.322e-231 725.0
CMS1_k127_1017418_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1138.0
CMS1_k127_1017418_1 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000001348 190.0
CMS1_k127_1019383_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 7.936e-294 908.0
CMS1_k127_1019383_1 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 590.0
CMS1_k127_1019383_2 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 370.0
CMS1_k127_1019383_3 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006373 283.0
CMS1_k127_1019383_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007994 253.0
CMS1_k127_1019383_5 Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000000000000000001261 236.0
CMS1_k127_1019383_6 GPR1/FUN34/yaaH family K07034 - - 0.00000000000000000000000000000000000000000000002871 172.0
CMS1_k127_1019383_7 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000000002282 87.0
CMS1_k127_1019383_8 - - - - 0.00000000000005151 81.0
CMS1_k127_1019933_0 PFAM Mammalian cell entry related domain protein K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 526.0
CMS1_k127_1019933_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 513.0
CMS1_k127_1019933_2 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit, TIM barrel K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 376.0
CMS1_k127_1019933_3 Paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000000000000000000009569 198.0
CMS1_k127_1019933_4 LysE type translocator - - - 0.0000000000000000000000000000000000000000000002661 175.0
CMS1_k127_1019933_5 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000004531 149.0
CMS1_k127_1019933_6 4Fe-4S binding domain - - - 0.000000000000000000000000000008648 120.0
CMS1_k127_1019933_7 ABC-type transport auxiliary lipoprotein component K09857 - - 0.00000000000000000000000000007465 126.0
CMS1_k127_1019933_8 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000002731 104.0
CMS1_k127_1020204_0 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004404 280.0
CMS1_k127_1020204_1 1-aminocyclopropane-1-carboxylate deaminase activity K01505,K05396,K19105 - 3.5.99.7,4.4.1.15,5.1.1.14 0.00000000000000000000000000000000000000000000001333 190.0
CMS1_k127_1020204_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000005243 172.0
CMS1_k127_1020204_3 - - - - 0.0000000000000000000000000000000000000000007169 162.0
CMS1_k127_1020204_4 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000007318 132.0
CMS1_k127_1020204_5 SNARE associated Golgi protein - - - 0.000000001966 67.0
CMS1_k127_1020204_6 Protein of unknown function (DUF1624) - - - 0.000000784 53.0
CMS1_k127_1028368_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.066e-314 975.0
CMS1_k127_1028368_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 363.0
CMS1_k127_1028368_2 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 318.0
CMS1_k127_1028368_3 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 269.0
CMS1_k127_1028368_4 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001333 261.0
CMS1_k127_1028368_5 Methylamine utilisation protein MauE - - - 0.00000000000000000000000000000000001198 140.0
CMS1_k127_1028368_6 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000001203 118.0
CMS1_k127_1028368_7 Protein of unknown function, DUF255 - - - 0.000000000000000000000000007672 120.0
CMS1_k127_1028368_8 - - - - 0.000000000000007102 77.0
CMS1_k127_1031346_0 Belongs to the ABC transporter superfamily K02031,K02032,K10824,K15587,K16786,K16787 - 3.6.3.24 1.124e-255 801.0
CMS1_k127_1031346_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 545.0
CMS1_k127_1031346_10 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000008559 153.0
CMS1_k127_1031346_11 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000274 121.0
CMS1_k127_1031346_12 - - - - 0.00000000000000000000000000999 115.0
CMS1_k127_1031346_2 Domain of unknown function (DUF4198) K02009 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 422.0
CMS1_k127_1031346_3 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 372.0
CMS1_k127_1031346_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 355.0
CMS1_k127_1031346_5 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 315.0
CMS1_k127_1031346_6 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001426 268.0
CMS1_k127_1031346_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002371 234.0
CMS1_k127_1031346_8 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000003045 188.0
CMS1_k127_1031346_9 Large extracellular alpha-helical protein K16915 - - 0.000000000000000000000000000000000000006986 149.0
CMS1_k127_1031351_0 cysteine-tRNA ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 403.0
CMS1_k127_1031351_1 PFAM Extracellular ligand-binding receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 345.0
CMS1_k127_1031351_2 Glycosyl transferase 4-like domain K15521 - 2.4.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001208 290.0
CMS1_k127_1031351_3 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001761 278.0
CMS1_k127_1031351_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000256 259.0
CMS1_k127_1031351_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005059 254.0
CMS1_k127_1031351_6 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000179 228.0
CMS1_k127_1031351_7 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000001688 153.0
CMS1_k127_1031351_8 Peptidase family S51 - - - 0.00000000000000000004049 99.0
CMS1_k127_1034418_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000005843 231.0
CMS1_k127_1034418_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000004949 127.0
CMS1_k127_1034458_0 FtsX-like permease family K02004 - - 2.551e-229 731.0
CMS1_k127_1034458_1 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000005433 242.0
CMS1_k127_1037900_0 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 535.0
CMS1_k127_1037900_1 Belongs to the UPF0260 family K09160 - - 0.00000000000000000000000000000000000000000000000123 177.0
CMS1_k127_103859_0 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 339.0
CMS1_k127_103859_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000006151 172.0
CMS1_k127_103859_2 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000002246 91.0
CMS1_k127_1039765_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1564.0
CMS1_k127_1039765_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008641 268.0
CMS1_k127_1039765_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000001508 239.0
CMS1_k127_1039765_3 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000009157 118.0
CMS1_k127_1040827_0 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 303.0
CMS1_k127_1040827_1 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009777 273.0
CMS1_k127_1041619_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1603.0
CMS1_k127_1041619_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 7.515e-319 998.0
CMS1_k127_1041619_10 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 355.0
CMS1_k127_1041619_11 signal peptide peptidase SppA K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 309.0
CMS1_k127_1041619_12 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 299.0
CMS1_k127_1041619_13 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000268 279.0
CMS1_k127_1041619_14 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005043 270.0
CMS1_k127_1041619_15 protein tyrosine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005455 259.0
CMS1_k127_1041619_16 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000008824 248.0
CMS1_k127_1041619_17 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000002192 213.0
CMS1_k127_1041619_18 - - - - 0.000000000000000000000000000000000000000000000000000001076 209.0
CMS1_k127_1041619_19 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000001356 164.0
CMS1_k127_1041619_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.537e-317 979.0
CMS1_k127_1041619_20 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000000000000000003436 123.0
CMS1_k127_1041619_21 - - - - 0.000000000000000000000000000003377 122.0
CMS1_k127_1041619_22 Bacterial protein of unknown function (DUF898) - - - 0.0000000004807 61.0
CMS1_k127_1041619_23 Phosphorylase superfamily K01239,K01243 - 3.2.2.1,3.2.2.9 0.00000004681 63.0
CMS1_k127_1041619_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.38e-244 763.0
CMS1_k127_1041619_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 610.0
CMS1_k127_1041619_5 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 571.0
CMS1_k127_1041619_6 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 531.0
CMS1_k127_1041619_7 PFAM aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 501.0
CMS1_k127_1041619_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 483.0
CMS1_k127_1041619_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 432.0
CMS1_k127_1049248_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0 1038.0
CMS1_k127_1049248_1 PFAM chemotaxis sensory transducer K03406 - - 2.218e-195 631.0
CMS1_k127_1049248_10 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000002287 157.0
CMS1_k127_1049248_11 phosphorelay signal transduction system K03413 - - 0.0000000000000000000000000000911 120.0
CMS1_k127_1049248_12 - - - - 0.000000000000000000002817 98.0
CMS1_k127_1049248_13 cheY-homologous receiver domain K03413 - - 0.00000000000000000664 86.0
CMS1_k127_1049248_14 - - - - 0.00000000002483 69.0
CMS1_k127_1049248_2 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 614.0
CMS1_k127_1049248_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 474.0
CMS1_k127_1049248_4 Sigma-54 interaction domain K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 456.0
CMS1_k127_1049248_5 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002747 273.0
CMS1_k127_1049248_6 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000008462 238.0
CMS1_k127_1049248_7 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000001631 222.0
CMS1_k127_1049248_8 CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000003561 217.0
CMS1_k127_1049248_9 response regulator, receiver K03413 - - 0.0000000000000000000000000000000000000000000001319 172.0
CMS1_k127_1059297_0 PFAM Acetyl-CoA hydrolase transferase K01067,K18118 - 2.8.3.18,3.1.2.1 7.191e-291 896.0
CMS1_k127_1059297_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 4.75e-212 664.0
CMS1_k127_1059297_2 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 407.0
CMS1_k127_1059297_3 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 291.0
CMS1_k127_1059297_4 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000003049 222.0
CMS1_k127_1059297_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000003972 148.0
CMS1_k127_1059297_6 NTPase - - - 0.0000000000000000000000000000000003321 139.0
CMS1_k127_105982_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 565.0
CMS1_k127_105982_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 555.0
CMS1_k127_105982_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000009266 216.0
CMS1_k127_105982_3 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000004117 205.0
CMS1_k127_105982_4 - - - - 0.0000000000000000000000000000009749 123.0
CMS1_k127_105982_5 cyclic nucleotide-binding K01420,K21563 - - 0.0000000000000000000000000001956 116.0
CMS1_k127_105982_6 - - - - 0.00000000000000000000000003163 108.0
CMS1_k127_1067152_0 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 600.0
CMS1_k127_1067152_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 351.0
CMS1_k127_1067152_2 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000001561 112.0
CMS1_k127_1067152_3 Pas domain K02484,K07645,K07711 - 2.7.13.3 0.000000000000000000000003284 111.0
CMS1_k127_1070816_0 Phospholipase D. Active site motifs. - - - 1.495e-315 979.0
CMS1_k127_1070816_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 451.0
CMS1_k127_1070816_2 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 356.0
CMS1_k127_1070816_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 293.0
CMS1_k127_1070816_4 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000003063 207.0
CMS1_k127_1070816_5 PFAM response regulator receiver - - - 0.00000000000005248 78.0
CMS1_k127_1075303_0 Magnesium chelatase, subunit ChlI K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 371.0
CMS1_k127_1075303_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003491 285.0
CMS1_k127_1075303_2 Forkhead associated domain K01768 - 4.6.1.1 0.0000000000000000006569 97.0
CMS1_k127_1078408_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 550.0
CMS1_k127_1078408_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 294.0
CMS1_k127_1078408_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001079 269.0
CMS1_k127_1078408_3 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000000001039 235.0
CMS1_k127_1085127_0 Rard protein K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 315.0
CMS1_k127_1085127_1 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006254 272.0
CMS1_k127_1085127_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002859 226.0
CMS1_k127_1085127_3 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000001558 183.0
CMS1_k127_1085127_4 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000002397 102.0
CMS1_k127_1086905_0 PFAM sigma-54 factor interaction domain-containing protein K03721 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 565.0
CMS1_k127_1086905_1 Protein kinase domain K12132 - 2.7.11.1 0.0004488 47.0
CMS1_k127_108706_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.12e-280 874.0
CMS1_k127_108706_1 Histidine kinase-like ATPases K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 368.0
CMS1_k127_108706_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000003101 208.0
CMS1_k127_108706_3 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.000000000000000000000000000000000000000000009719 166.0
CMS1_k127_108706_4 FAD dependent oxidoreductase - - - 0.00000000000000000000000008426 109.0
CMS1_k127_1091503_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 598.0
CMS1_k127_1091503_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002435 235.0
CMS1_k127_1091503_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000001991 171.0
CMS1_k127_1091503_3 PFAM GGDEF domain containing protein - - - 0.000000000000000004119 87.0
CMS1_k127_1092155_0 - - - - 0.0000000000000000000000000000000000000000000000002131 189.0
CMS1_k127_1097353_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 377.0
CMS1_k127_1097353_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000617 126.0
CMS1_k127_1099711_0 Domain of unknown function (DUF362) K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 609.0
CMS1_k127_1099711_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 544.0
CMS1_k127_1099711_10 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000009696 230.0
CMS1_k127_1099711_11 ACT domain - - - 0.000000000000000000000000000000000000000000000000000000000001525 214.0
CMS1_k127_1099711_12 NfeD-like C-terminal, partner-binding - - - 0.00000000000000000000000000000000000000000000004299 173.0
CMS1_k127_1099711_13 nUDIX hydrolase K03574,K08320 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55,3.6.1.65 0.000000000000000000000000000000000000003897 149.0
CMS1_k127_1099711_14 - - - - 0.000000000000009057 82.0
CMS1_k127_1099711_17 Fibronectin type 3 domain - - - 0.0003415 49.0
CMS1_k127_1099711_2 SigmaW regulon antibacterial - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 522.0
CMS1_k127_1099711_3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 507.0
CMS1_k127_1099711_4 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 370.0
CMS1_k127_1099711_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 350.0
CMS1_k127_1099711_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 338.0
CMS1_k127_1099711_7 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002638 273.0
CMS1_k127_1099711_8 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006586 274.0
CMS1_k127_1099711_9 Domain of unknown function (DUF362) K07138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005129 250.0
CMS1_k127_1103308_0 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 305.0
CMS1_k127_1103308_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002477 267.0
CMS1_k127_1103308_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000000001019 207.0
CMS1_k127_1103308_3 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000005045 201.0
CMS1_k127_1103308_4 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000531 155.0
CMS1_k127_1103308_5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000003116 115.0
CMS1_k127_1103308_6 NmrA-like family - - - 0.0000000000000000000000001869 119.0
CMS1_k127_1103308_7 Glutamine amido-transferase - - - 0.00000000000003914 81.0
CMS1_k127_1103308_8 PFAM glutamine amidotransferase class-II - - - 0.0006139 49.0
CMS1_k127_1103987_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 3.159e-236 736.0
CMS1_k127_1103987_1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 515.0
CMS1_k127_1103987_2 YCII-related domain - - - 0.00000000000000000000000000003833 118.0
CMS1_k127_1103987_3 PFAM Cyclic nucleotide-binding domain - - - 0.00000000000000000000844 98.0
CMS1_k127_1107332_0 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 448.0
CMS1_k127_1107332_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 393.0
CMS1_k127_1107332_2 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 349.0
CMS1_k127_1107332_3 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005037 280.0
CMS1_k127_1107332_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000878 254.0
CMS1_k127_1107332_5 domain protein - - - 0.000000000000000000000000000000000000000000005869 183.0
CMS1_k127_1107332_6 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.000000000000000000000000000000000000000002276 159.0
CMS1_k127_1107332_7 domain protein - - - 0.00000000000000003164 96.0
CMS1_k127_1107332_8 - - - - 0.0000000000000001579 81.0
CMS1_k127_1109506_0 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 547.0
CMS1_k127_1109506_1 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 314.0
CMS1_k127_1109506_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K16950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 291.0
CMS1_k127_1109506_3 PFAM Coenzyme F420 hydrogenase dehydrogenase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002275 273.0
CMS1_k127_1109506_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000158 261.0
CMS1_k127_1109506_5 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000003179 125.0
CMS1_k127_1109506_6 4Fe-4S dicluster domain - - - 0.0000000000000000000000005746 110.0
CMS1_k127_1109506_7 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000008075 108.0
CMS1_k127_1109506_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000101 61.0
CMS1_k127_1112885_0 family UPF0324 - - - 6.694e-240 758.0
CMS1_k127_1112885_1 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 518.0
CMS1_k127_1112885_2 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 497.0
CMS1_k127_1112885_3 Iron-storage protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000002803 182.0
CMS1_k127_1112885_4 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000001951 143.0
CMS1_k127_111513_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 1.56e-302 953.0
CMS1_k127_111513_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 9.094e-219 685.0
CMS1_k127_111513_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 2.911e-217 690.0
CMS1_k127_111513_3 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 328.0
CMS1_k127_111513_4 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000006074 206.0
CMS1_k127_111513_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000006925 189.0
CMS1_k127_111513_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000005783 146.0
CMS1_k127_111513_7 Mo-molybdopterin cofactor metabolic process K03154 - - 0.00000009824 64.0
CMS1_k127_1119807_0 Phosphonate ABC transporter, periplasmic K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 334.0
CMS1_k127_1119807_1 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.000000000000000000005705 95.0
CMS1_k127_1119807_2 Glyoxalase-like domain - - - 0.00000000000000001165 83.0
CMS1_k127_1124793_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.0 1422.0
CMS1_k127_1124793_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 316.0
CMS1_k127_114212_0 Electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 491.0
CMS1_k127_114212_1 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000001885 209.0
CMS1_k127_114212_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000002535 151.0
CMS1_k127_1147155_0 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 492.0
CMS1_k127_1147155_1 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 424.0
CMS1_k127_1147155_2 SBF-like CPA transporter family (DUF4137) K14347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002556 261.0
CMS1_k127_1147155_3 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.00000000000000000000000000000000428 133.0
CMS1_k127_1147155_4 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.0003251 52.0
CMS1_k127_1148435_0 NMT1/THI5 like - - - 1.519e-210 668.0
CMS1_k127_1148435_1 NMT1/THI5 like - - - 7.417e-199 633.0
CMS1_k127_1148435_10 Protein of unknown function, DUF480 K09915 - - 0.000000000000000000000000000000000000000000000000000002031 198.0
CMS1_k127_1148435_11 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000007906 187.0
CMS1_k127_1148435_12 - - - - 0.00000000000000000000000000000000000000003071 165.0
CMS1_k127_1148435_13 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.0000000000000000000000000002706 117.0
CMS1_k127_1148435_14 lyase activity - - - 0.0000000000001026 84.0
CMS1_k127_1148435_15 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0001416 44.0
CMS1_k127_1148435_2 Toxic anion resistance protein (TelA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 470.0
CMS1_k127_1148435_3 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 459.0
CMS1_k127_1148435_4 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 409.0
CMS1_k127_1148435_5 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 386.0
CMS1_k127_1148435_6 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 346.0
CMS1_k127_1148435_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 324.0
CMS1_k127_1148435_8 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000003732 212.0
CMS1_k127_1148435_9 Methyltransferase K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000001439 208.0
CMS1_k127_1148500_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 394.0
CMS1_k127_1148500_1 Prokaryotic cytochrome b561 K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 329.0
CMS1_k127_1148500_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000001528 82.0
CMS1_k127_1149068_0 COG0659 Sulfate permease and related transporters (MFS superfamily K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 361.0
CMS1_k127_1149068_1 Universal stress protein family K07090 - - 0.0000006759 60.0
CMS1_k127_1150901_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1618.0
CMS1_k127_1150901_1 transporter, DctM subunit K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 517.0
CMS1_k127_1150901_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 514.0
CMS1_k127_1150901_3 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 312.0
CMS1_k127_1150901_4 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000003146 201.0
CMS1_k127_1150901_5 - - - - 0.000000000000000000000000000001327 126.0
CMS1_k127_1150901_6 Site-specific recombinases, DNA invertase Pin homologs K14060 - - 0.00000000000000000002626 92.0
CMS1_k127_1151938_0 RDD family - - - 0.00000000000000000000000000000000000000000000000002654 189.0
CMS1_k127_1151938_1 - - - - 0.000000000000000000000000000000000000000008313 160.0
CMS1_k127_1152437_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 606.0
CMS1_k127_1152437_1 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 496.0
CMS1_k127_1152437_2 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 413.0
CMS1_k127_1152437_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 396.0
CMS1_k127_1152437_4 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
CMS1_k127_1152437_5 TIGRFAM hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000504 273.0
CMS1_k127_1152437_6 - - - - 0.00000000000000000000002159 109.0
CMS1_k127_116269_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 425.0
CMS1_k127_116269_1 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 314.0
CMS1_k127_116269_2 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000996 275.0
CMS1_k127_116269_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 263.0
CMS1_k127_116269_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004593 243.0
CMS1_k127_116269_5 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000003244 174.0
CMS1_k127_116269_6 - - - - 0.000000000000000000000000000000000001644 141.0
CMS1_k127_116269_7 PFAM Cold-shock K03704 - - 0.0000000000000000000000000000000001211 132.0
CMS1_k127_116269_8 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000003707 132.0
CMS1_k127_116269_9 -phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000116 103.0
CMS1_k127_1163359_0 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1171.0
CMS1_k127_1163359_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 5.168e-306 953.0
CMS1_k127_1163359_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00125 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 439.0
CMS1_k127_1163359_3 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000007103 239.0
CMS1_k127_116693_0 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 462.0
CMS1_k127_116693_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000006714 175.0
CMS1_k127_116693_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000006085 99.0
CMS1_k127_1173803_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.156e-210 661.0
CMS1_k127_1173803_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000007973 192.0
CMS1_k127_1176576_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 583.0
CMS1_k127_1176576_1 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 525.0
CMS1_k127_1176576_2 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000002289 207.0
CMS1_k127_1181670_0 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000001555 164.0
CMS1_k127_1181670_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000002162 93.0
CMS1_k127_1183017_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 1.919e-270 841.0
CMS1_k127_1183017_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 5.25e-220 697.0
CMS1_k127_1183017_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000008597 181.0
CMS1_k127_1183017_11 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000001281 178.0
CMS1_k127_1183017_12 Translation initiation factor K03113 - - 0.000000000000000000000000000000000000486 143.0
CMS1_k127_1183017_13 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000025 82.0
CMS1_k127_1183017_2 Binding-protein-dependent transport system inner membrane component K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 600.0
CMS1_k127_1183017_3 Bacterial extracellular solute-binding proteins, family 3 K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 539.0
CMS1_k127_1183017_4 Binding-protein-dependent transport system inner membrane component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 537.0
CMS1_k127_1183017_5 PFAM Cys Met metabolism K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 512.0
CMS1_k127_1183017_6 PFAM ABC transporter related K02028,K09972 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 440.0
CMS1_k127_1183017_7 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 359.0
CMS1_k127_1183017_8 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 338.0
CMS1_k127_1183017_9 Asparaginase, N-terminal K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000001449 233.0
CMS1_k127_1185527_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1080.0
CMS1_k127_1185527_1 [2Fe-2S] binding domain K18029 - 1.17.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009994 267.0
CMS1_k127_1185527_2 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001164 272.0
CMS1_k127_1185527_3 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000003627 177.0
CMS1_k127_1185527_4 - - - - 0.00000004563 59.0
CMS1_k127_1187839_0 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 2.201e-255 795.0
CMS1_k127_1187839_1 Aminotransferase class-V K00281,K00283 - 1.4.4.2 1.072e-225 709.0
CMS1_k127_1187839_10 Class III cytochrome C family - - - 0.00003241 48.0
CMS1_k127_1187839_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.511e-194 650.0
CMS1_k127_1187839_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 577.0
CMS1_k127_1187839_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000006141 231.0
CMS1_k127_1187839_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000006909 186.0
CMS1_k127_1187839_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000005894 164.0
CMS1_k127_1187839_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000001569 154.0
CMS1_k127_1187839_8 Thioredoxin - - - 0.000000000000000003447 90.0
CMS1_k127_1187839_9 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.0000000000000005025 81.0
CMS1_k127_1195852_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 413.0
CMS1_k127_1195852_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 412.0
CMS1_k127_1195852_2 PFAM peptidase M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 371.0
CMS1_k127_1195852_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 293.0
CMS1_k127_1195852_4 proteolysis - - - 0.000000000000000000002459 103.0
CMS1_k127_1197179_0 Fe-S cluster domain protein - - - 7.679e-273 848.0
CMS1_k127_1197179_1 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000004702 209.0
CMS1_k127_1208137_0 Aconitase C-terminal domain - - - 1.237e-309 959.0
CMS1_k127_1208137_1 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 5.211e-269 845.0
CMS1_k127_1208137_2 DEAD/H associated K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 631.0
CMS1_k127_1208137_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 610.0
CMS1_k127_1208137_4 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 481.0
CMS1_k127_1208137_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 387.0
CMS1_k127_1208137_6 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 370.0
CMS1_k127_1208137_7 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000002733 237.0
CMS1_k127_1208137_8 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000009613 164.0
CMS1_k127_1209510_0 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 447.0
CMS1_k127_1209510_1 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 316.0
CMS1_k127_1209510_2 Transport of potassium into the cell K03549 - - 0.0000000000002254 75.0
CMS1_k127_1212785_0 PFAM ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 332.0
CMS1_k127_1212785_1 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 300.0
CMS1_k127_1212785_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000003054 219.0
CMS1_k127_122385_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.449e-254 793.0
CMS1_k127_122385_1 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 506.0
CMS1_k127_122385_10 Protein of unknown function (DUF2914) - - - 0.00000000000000000003869 98.0
CMS1_k127_122385_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 508.0
CMS1_k127_122385_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 471.0
CMS1_k127_122385_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 318.0
CMS1_k127_122385_5 AsnC-type helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000002642 211.0
CMS1_k127_122385_6 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000001464 192.0
CMS1_k127_122385_7 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000001788 176.0
CMS1_k127_122385_8 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000007241 138.0
CMS1_k127_122385_9 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000006952 128.0
CMS1_k127_124107_0 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 519.0
CMS1_k127_124107_1 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 357.0
CMS1_k127_124107_2 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001417 254.0
CMS1_k127_124107_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000005211 244.0
CMS1_k127_124107_4 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000004757 183.0
CMS1_k127_124107_5 HD domain - - - 0.000000000000000000000000000000000007403 156.0
CMS1_k127_1251875_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 588.0
CMS1_k127_1251875_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 488.0
CMS1_k127_1251875_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000003956 189.0
CMS1_k127_1251875_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000291 178.0
CMS1_k127_1251875_4 Histidine kinase K02660,K11525 - - 0.0000000000000006833 89.0
CMS1_k127_1251907_0 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000002543 228.0
CMS1_k127_1251907_1 Transcription termination factor nusG K05785 - - 0.000000000000000000000000000000000000000000000000000000003161 205.0
CMS1_k127_1251907_2 Phosphotransferase enzyme family K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000002299 198.0
CMS1_k127_1251907_3 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.000000000000000000000000000000000000000001947 160.0
CMS1_k127_1251907_4 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000000000000000005841 155.0
CMS1_k127_126458_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1048.0
CMS1_k127_126458_1 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002218 269.0
CMS1_k127_126458_2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000346 186.0
CMS1_k127_126458_3 Domain of unknown function (DUF3786) - - - 0.00000000000000000002344 99.0
CMS1_k127_1266510_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 404.0
CMS1_k127_1266510_1 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006297 260.0
CMS1_k127_1266510_2 - - - - 0.0000000000000000000000000000000000000000000000003529 177.0
CMS1_k127_1266510_3 L11 methyltransferase K02687 - - 0.000000000000000000000000000000000004363 148.0
CMS1_k127_1266510_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000004225 121.0
CMS1_k127_1266510_5 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.0000003075 52.0
CMS1_k127_1269575_0 4Fe-4S dicluster domain - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2.257e-279 861.0
CMS1_k127_1269575_1 response regulator, receiver - - - 3.104e-211 677.0
CMS1_k127_1269575_10 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004852 278.0
CMS1_k127_1269575_11 - - - - 0.00000000000000000000000000000000000000000000000006862 183.0
CMS1_k127_1269575_12 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000007998 158.0
CMS1_k127_1269575_13 RHS Repeat - - - 0.0000000000000000000000000000000000005729 164.0
CMS1_k127_1269575_14 Transcriptional regulator - - - 0.0000000000000000000000000000002698 127.0
CMS1_k127_1269575_15 transcriptional regulator - - - 0.000000000000000000000000000001919 126.0
CMS1_k127_1269575_16 PAAR motif - - - 0.0000000000000000000000000002516 124.0
CMS1_k127_1269575_17 Putative prokaryotic signal transducing protein - - - 0.0000000000000000002763 91.0
CMS1_k127_1269575_18 Domain of unknown function (DUF4123) - - - 0.0000000000004059 85.0
CMS1_k127_1269575_19 - - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000004869 49.0
CMS1_k127_1269575_2 PFAM Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 7.107e-197 619.0
CMS1_k127_1269575_20 Histidine kinase K02484 - 2.7.13.3 0.0002223 43.0
CMS1_k127_1269575_3 TIGRFAM YD repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 656.0
CMS1_k127_1269575_4 Class III cytochrome C family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 518.0
CMS1_k127_1269575_5 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 497.0
CMS1_k127_1269575_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 471.0
CMS1_k127_1269575_7 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 391.0
CMS1_k127_1269575_8 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 387.0
CMS1_k127_1269575_9 nitrate reductase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 320.0
CMS1_k127_1285084_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 1.644e-195 614.0
CMS1_k127_1285084_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 503.0
CMS1_k127_1285084_2 amino acid carrier protein K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 469.0
CMS1_k127_1285084_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 441.0
CMS1_k127_1285084_4 Sensor diguanylate cyclase, PAS domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 330.0
CMS1_k127_1285084_5 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000001196 166.0
CMS1_k127_1285084_6 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000001955 103.0
CMS1_k127_1285084_7 Protein of unknown function (DUF4242) - - - 0.000000000004866 66.0
CMS1_k127_1288280_0 TIGRFAM potassium uptake protein, TrkH family K03498 - - 5.296e-202 637.0
CMS1_k127_1288280_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K11383 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 616.0
CMS1_k127_1288280_2 Sigma-54 interaction domain K11384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 593.0
CMS1_k127_1288280_3 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 378.0
CMS1_k127_1288280_4 Resolvase, N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 307.0
CMS1_k127_1288280_5 - - - - 0.00000000000000000000000007091 116.0
CMS1_k127_1288324_0 OmpA family - - - 0.0 2531.0
CMS1_k127_1288324_1 Tetratricopeptide repeat - - - 0.0 1246.0
CMS1_k127_1288324_10 - - - - 0.00000000000000000000000000207 114.0
CMS1_k127_1288324_11 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000115 105.0
CMS1_k127_1288324_2 Tetratricopeptide repeat - - - 1.337e-286 891.0
CMS1_k127_1288324_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 491.0
CMS1_k127_1288324_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 340.0
CMS1_k127_1288324_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000001109 243.0
CMS1_k127_1288324_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001734 231.0
CMS1_k127_1288324_7 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000000000000008632 224.0
CMS1_k127_1288324_8 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000004394 206.0
CMS1_k127_1288324_9 domain protein - - - 0.0000000000000000000000000000000000000000001703 160.0
CMS1_k127_1289983_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 387.0
CMS1_k127_1289983_1 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 370.0
CMS1_k127_1289983_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 343.0
CMS1_k127_1289983_3 AzlC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003174 276.0
CMS1_k127_1289983_4 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000000000000000002375 111.0
CMS1_k127_1289983_5 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.00000004913 61.0
CMS1_k127_1296740_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 443.0
CMS1_k127_1296740_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 341.0
CMS1_k127_1296740_2 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 298.0
CMS1_k127_1296740_3 - - - - 0.00000000000000000000000005355 109.0
CMS1_k127_1296740_4 NosL - - - 0.00000000000000000005114 91.0
CMS1_k127_1298554_0 Transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 331.0
CMS1_k127_1298554_1 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000000000000007839 191.0
CMS1_k127_1298554_2 Sporulation related domain - - - 0.000000000000000000000000002763 127.0
CMS1_k127_1299166_0 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 373.0
CMS1_k127_1299166_1 PFAM aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000002447 172.0
CMS1_k127_1299166_2 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000000000000000000000000000000000007055 160.0
CMS1_k127_1325276_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 9.988e-304 939.0
CMS1_k127_1325276_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 586.0
CMS1_k127_1325276_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0007563 44.0
CMS1_k127_1337912_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 1.809e-253 819.0
CMS1_k127_1337912_1 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 414.0
CMS1_k127_1337912_2 PFAM ThiJ PfpI domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 293.0
CMS1_k127_1337912_3 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000006243 185.0
CMS1_k127_1337912_4 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000004954 175.0
CMS1_k127_1337912_5 - - - - 0.0000000003716 68.0
CMS1_k127_1347790_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000107 194.0
CMS1_k127_1349428_0 Peptidase C39 family K06992 - - 0.0000000000000000000000000000000000000000000000000000003816 198.0
CMS1_k127_135486_0 Bacterial extracellular solute-binding protein K17321 - - 0.0 1002.0
CMS1_k127_135486_1 tungstate ion transport K06857,K17325 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 559.0
CMS1_k127_135486_10 Predicted small integral membrane protein (DUF2160) - - - 0.00000000000000000000000000000000000006601 143.0
CMS1_k127_135486_2 Binding-protein-dependent transport system inner membrane component K17322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 528.0
CMS1_k127_135486_3 ATPases associated with a variety of cellular activities K17324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 479.0
CMS1_k127_135486_4 PFAM binding-protein-dependent transport systems inner membrane component K02026,K17323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 477.0
CMS1_k127_135486_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 463.0
CMS1_k127_135486_6 Transcriptional regulator, DeoR K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 357.0
CMS1_k127_135486_7 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005382 282.0
CMS1_k127_135486_8 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004259 248.0
CMS1_k127_135486_9 galactose-1-phosphate uridylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001486 231.0
CMS1_k127_136706_0 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 528.0
CMS1_k127_1382536_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 402.0
CMS1_k127_1382536_1 Immunity protein 70 - - - 0.0000000000000000000000000000000000000000004323 162.0
CMS1_k127_1382536_2 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000000000009752 137.0
CMS1_k127_1382536_3 Domain of unknown function (DUF4126) - - - 0.0000000000000000000007638 98.0
CMS1_k127_1382536_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000009036 62.0
CMS1_k127_1383341_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1265.0
CMS1_k127_1383341_1 4Fe-4S ferredoxin iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 347.0
CMS1_k127_1383341_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 325.0
CMS1_k127_1383341_3 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004853 263.0
CMS1_k127_1383341_4 - - - - 0.00000000000000000000000000000000000000002696 158.0
CMS1_k127_1383341_5 nucleotidyltransferase activity K00984 - 2.7.7.47 0.000000000000000000000001085 113.0
CMS1_k127_1383341_6 - - - - 0.0000000000000000001078 91.0
CMS1_k127_1383341_7 PFAM cytoplasmic chaperone TorD family protein - - - 0.0000000000002967 76.0
CMS1_k127_138818_0 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 497.0
CMS1_k127_138818_1 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000008324 206.0
CMS1_k127_138818_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000001006 145.0
CMS1_k127_138818_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000006347 133.0
CMS1_k127_138818_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000003832 87.0
CMS1_k127_138818_5 Protein of unknown function (DUF498/DUF598) - - - 0.00001323 47.0
CMS1_k127_1388249_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 361.0
CMS1_k127_1388249_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000004248 235.0
CMS1_k127_1388249_2 Protein of unknown function DUF134 - - - 0.00000000000000000000000000000000000000000000000006834 180.0
CMS1_k127_1388249_3 CBS domain containing protein K07182 - - 0.000000000000002318 83.0
CMS1_k127_1388249_4 Lysin motif - - - 0.000000003032 63.0
CMS1_k127_1394437_0 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 1.767e-292 911.0
CMS1_k127_1394437_1 PFAM aminotransferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 316.0
CMS1_k127_1394437_2 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 295.0
CMS1_k127_1394437_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000001854 187.0
CMS1_k127_1394437_4 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.00000000000001254 74.0
CMS1_k127_1394437_5 cyclic nucleotide-binding K01420,K21563 - - 0.00003948 52.0
CMS1_k127_139734_0 NADH-quinone oxidoreductase chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 531.0
CMS1_k127_139734_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 517.0
CMS1_k127_139734_2 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004602 273.0
CMS1_k127_139734_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002857 245.0
CMS1_k127_139734_4 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000001448 114.0
CMS1_k127_139734_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000005108 105.0
CMS1_k127_139734_6 Belongs to the complex I subunit 6 family K05578 - 1.6.5.3 0.0000000001378 69.0
CMS1_k127_139734_7 haloacid dehalogenase-like hydrolase K17686 - 3.6.3.54 0.00000001249 59.0
CMS1_k127_139734_8 Sugar (and other) transporter - - - 0.00000008619 54.0
CMS1_k127_139734_9 Major facilitator superfamily - - - 0.00001401 47.0
CMS1_k127_1427601_0 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 560.0
CMS1_k127_1427601_1 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 497.0
CMS1_k127_1432117_0 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 495.0
CMS1_k127_1432117_1 Peptidase family M20/M25/M40 K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 296.0
CMS1_k127_1432117_2 - - - - 0.000000000000000000000000000000000001878 140.0
CMS1_k127_1439989_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K18930 - - 0.0 1167.0
CMS1_k127_1439989_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 530.0
CMS1_k127_1439989_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 461.0
CMS1_k127_1439989_3 TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
CMS1_k127_1439989_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 347.0
CMS1_k127_1439989_5 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000000000000000000000000000000005604 220.0
CMS1_k127_1439989_6 - - - - 0.0000000000000000000000000000000000000000000000000001773 192.0
CMS1_k127_1439989_7 - - - - 0.00000000000000000000000000000000005987 138.0
CMS1_k127_14517_0 MMPL family K07003 - - 5.621e-264 839.0
CMS1_k127_14517_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 388.0
CMS1_k127_14517_2 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
CMS1_k127_14517_3 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000002144 144.0
CMS1_k127_14517_4 PFAM Bacterial regulatory proteins, tetR family K16137 - - 0.0000000000000000000000000000000000816 140.0
CMS1_k127_14517_6 Low-density lipoprotein receptor domain class A K06233,K20049 GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007564,GO:0008150,GO:0016020,GO:0016324,GO:0030100,GO:0032501,GO:0032502,GO:0032879,GO:0040003,GO:0042335,GO:0044425,GO:0044459,GO:0044464,GO:0045177,GO:0048070,GO:0048079,GO:0048082,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051049,GO:0051128,GO:0051239,GO:0060627,GO:0065007,GO:0071944,GO:0098590,GO:2000026 - 0.000003109 56.0
CMS1_k127_1453227_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 553.0
CMS1_k127_1453227_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 460.0
CMS1_k127_1453227_2 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000003042 229.0
CMS1_k127_1453227_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000155 197.0
CMS1_k127_1453227_4 TRAP transporter T-component - - - 0.000000000000000000000000000000000176 144.0
CMS1_k127_1453227_5 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000008923 68.0
CMS1_k127_14645_0 COG0607 Rhodanese-related sulfurtransferase K03151 - 2.8.1.4 0.00000000000000000000000003426 112.0
CMS1_k127_1480191_0 PFAM TrkA-N domain K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 443.0
CMS1_k127_1480191_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 465.0
CMS1_k127_1480191_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 314.0
CMS1_k127_1480191_3 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 299.0
CMS1_k127_1480191_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001743 259.0
CMS1_k127_1480191_5 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000484 249.0
CMS1_k127_1480191_6 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000009007 188.0
CMS1_k127_1480191_7 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000002777 147.0
CMS1_k127_1480191_8 - - - - 0.000000000000001707 79.0
CMS1_k127_1486088_0 Lytic transglycosylase catalytic K08307 - - 4.373e-198 637.0
CMS1_k127_1486088_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 329.0
CMS1_k127_1486088_2 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001391 263.0
CMS1_k127_1486088_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000001708 76.0
CMS1_k127_1486088_4 - - - - 0.0000000000003316 71.0
CMS1_k127_1509600_0 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 2.072e-200 646.0
CMS1_k127_1509600_1 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 509.0
CMS1_k127_1509600_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000002259 211.0
CMS1_k127_1509600_3 dehydratase - - - 0.00000000000000000000000000000002505 130.0
CMS1_k127_1509600_4 acyl carrier protein K02078 - - 0.00000000000000000000000387 105.0
CMS1_k127_1509600_5 FabA-like domain - - - 0.00000000001879 70.0
CMS1_k127_15159_0 CBS domain K00974 - 2.7.7.72 1.054e-231 732.0
CMS1_k127_15159_1 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 517.0
CMS1_k127_15159_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003507 271.0
CMS1_k127_15159_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000000000000000000000005482 241.0
CMS1_k127_15159_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000001514 225.0
CMS1_k127_15159_5 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000002472 190.0
CMS1_k127_15159_6 PFAM Xylose - - - 0.0000000000000000000008271 99.0
CMS1_k127_1519430_0 Sodium:solute symporter family K03307 - - 6.259e-198 630.0
CMS1_k127_1519430_1 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 444.0
CMS1_k127_1519430_2 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 360.0
CMS1_k127_1519430_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 309.0
CMS1_k127_1519430_4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 296.0
CMS1_k127_1519430_5 Putative heavy-metal chelation K09138 - - 0.00000000000000000000000000000000000000000000000000000000000000000003209 240.0
CMS1_k127_1519430_6 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000008541 214.0
CMS1_k127_1519430_7 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000005407 207.0
CMS1_k127_1519430_8 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000007946 136.0
CMS1_k127_1519430_9 protein trimerization K02453 - - 0.00000000000000000000001451 105.0
CMS1_k127_151974_0 MMPL family K07003 - - 0.0 1075.0
CMS1_k127_151974_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.183e-223 707.0
CMS1_k127_151974_2 Protein of unknown function (DUF1302) - - - 3.961e-216 684.0
CMS1_k127_151974_3 Uroporphyrinogen decarboxylase (URO-D) - - - 3.135e-201 632.0
CMS1_k127_151974_4 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 561.0
CMS1_k127_151974_5 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 454.0
CMS1_k127_151974_6 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 352.0
CMS1_k127_151974_8 PFAM Archaeal ATPase - - - 0.00000000004532 74.0
CMS1_k127_153059_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 381.0
CMS1_k127_153059_1 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 370.0
CMS1_k127_153059_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009441 255.0
CMS1_k127_153059_3 - - - - 0.00000000000000000000007097 102.0
CMS1_k127_15519_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1012.0
CMS1_k127_15519_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.183e-263 817.0
CMS1_k127_15519_10 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000002087 238.0
CMS1_k127_15519_11 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000006176 237.0
CMS1_k127_15519_12 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000001109 179.0
CMS1_k127_15519_13 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000003546 171.0
CMS1_k127_15519_14 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000924 106.0
CMS1_k127_15519_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 6.57e-213 667.0
CMS1_k127_15519_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 514.0
CMS1_k127_15519_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 444.0
CMS1_k127_15519_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001819 282.0
CMS1_k127_15519_6 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001963 282.0
CMS1_k127_15519_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001757 281.0
CMS1_k127_15519_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001785 266.0
CMS1_k127_15519_9 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009754 242.0
CMS1_k127_1556019_0 PFAM AMP-dependent synthetase and ligase - - - 6.311e-266 826.0
CMS1_k127_1556019_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 5.949e-235 736.0
CMS1_k127_1556019_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 389.0
CMS1_k127_1556019_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000008272 222.0
CMS1_k127_1556019_4 Domain of unknown function (DUF1844) - - - 0.0000000000000000000000000002434 118.0
CMS1_k127_157153_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 2.073e-220 691.0
CMS1_k127_157153_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 379.0
CMS1_k127_157153_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000004947 165.0
CMS1_k127_157153_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00001529 52.0
CMS1_k127_1575141_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 6.113e-227 724.0
CMS1_k127_158505_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 548.0
CMS1_k127_158505_1 4Fe-4S dicluster domain K00196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000323 251.0
CMS1_k127_158505_2 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000009768 174.0
CMS1_k127_1605952_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 516.0
CMS1_k127_1605952_1 PFAM Radical SAM domain protein K07139 - - 0.000000000000000000000000000000003096 131.0
CMS1_k127_1617740_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1035.0
CMS1_k127_1617740_1 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 521.0
CMS1_k127_1617740_2 RimK-like ATP-grasp domain K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 342.0
CMS1_k127_1617740_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 331.0
CMS1_k127_1617740_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000001103 265.0
CMS1_k127_1617740_5 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001218 252.0
CMS1_k127_1617740_6 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000127 113.0
CMS1_k127_1617740_8 - - - - 0.00003974 51.0
CMS1_k127_1621157_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.578e-229 716.0
CMS1_k127_1621157_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 510.0
CMS1_k127_1621157_2 Tryptophan synthase alpha chain K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 357.0
CMS1_k127_1621157_3 UTRA domain K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004533 257.0
CMS1_k127_1621157_4 Dodecin K09165 - - 0.00000000000000000000001061 103.0
CMS1_k127_1621157_6 Helix-turn-helix XRE-family like proteins - - - 0.00008408 53.0
CMS1_k127_162547_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 588.0
CMS1_k127_162547_1 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 526.0
CMS1_k127_162547_10 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000000000000000000000000000000000000002528 217.0
CMS1_k127_162547_11 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000001016 196.0
CMS1_k127_162547_12 - - - - 0.000000000000000000000000000000000000000000000000000171 188.0
CMS1_k127_162547_13 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000001504 141.0
CMS1_k127_162547_14 Belongs to the UPF0296 family K09777 - - 0.000000000000000000000000000000000002243 140.0
CMS1_k127_162547_15 Belongs to the UPF0434 family K09791 - - 0.0000000000000000000004834 96.0
CMS1_k127_162547_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 398.0
CMS1_k127_162547_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 374.0
CMS1_k127_162547_4 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 363.0
CMS1_k127_162547_5 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 301.0
CMS1_k127_162547_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
CMS1_k127_162547_7 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006448 249.0
CMS1_k127_162547_8 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003687 246.0
CMS1_k127_162547_9 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000001269 218.0
CMS1_k127_1629689_0 TIGRFAM PfaD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 616.0
CMS1_k127_1629689_1 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 402.0
CMS1_k127_1629689_2 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009891 245.0
CMS1_k127_1630459_0 Sodium:sulfate symporter transmembrane region - - - 1.153e-317 986.0
CMS1_k127_1630459_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 529.0
CMS1_k127_1630459_2 cheY-homologous receiver domain - - - 0.00000000000000000004866 90.0
CMS1_k127_1630705_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1587.0
CMS1_k127_1630705_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 543.0
CMS1_k127_1630705_2 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 425.0
CMS1_k127_1630705_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 345.0
CMS1_k127_1630705_4 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.0000000000000000000000000001804 115.0
CMS1_k127_163463_0 cytochrome c oxidase K00404 - 1.9.3.1 8.037e-230 718.0
CMS1_k127_163463_1 Dual specificity phosphatase, catalytic domain - - - 1.054e-225 709.0
CMS1_k127_163463_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 525.0
CMS1_k127_163463_3 cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 514.0
CMS1_k127_163463_4 FMN-dependent dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 458.0
CMS1_k127_163463_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000005821 177.0
CMS1_k127_163463_6 - - - - 0.00000000000000000000000006648 109.0
CMS1_k127_163463_7 - - - - 0.00000000000000000001306 93.0
CMS1_k127_163463_8 Cytochrome oxidase maturation protein - - - 0.00000000000000000004369 92.0
CMS1_k127_1640744_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 392.0
CMS1_k127_1640744_1 ABC transporter K02013,K05776 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 369.0
CMS1_k127_1640744_2 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003719 196.0
CMS1_k127_1640744_3 - - - - 0.0000000000000000000000000000000000000000000000000002778 194.0
CMS1_k127_1640744_5 Zinc-binding dehydrogenase - - - 0.00000000000000000000004217 99.0
CMS1_k127_1645589_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 4.162e-246 770.0
CMS1_k127_1645589_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.136e-218 684.0
CMS1_k127_1645589_10 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000005571 188.0
CMS1_k127_1645589_11 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000002352 144.0
CMS1_k127_1645589_12 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000003958 146.0
CMS1_k127_1645589_13 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000001964 130.0
CMS1_k127_1645589_14 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000005526 127.0
CMS1_k127_1645589_15 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.0000000000000000000000000001251 117.0
CMS1_k127_1645589_16 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000023 113.0
CMS1_k127_1645589_17 AAA domain K07133 - - 0.000000000000000000002863 96.0
CMS1_k127_1645589_18 ATPase (AAA superfamily K07133 - - 0.000001027 55.0
CMS1_k127_1645589_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 405.0
CMS1_k127_1645589_3 Thiamine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 393.0
CMS1_k127_1645589_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 295.0
CMS1_k127_1645589_5 Lipase (class 3) K01046 - 3.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002296 288.0
CMS1_k127_1645589_6 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006121 276.0
CMS1_k127_1645589_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000003292 239.0
CMS1_k127_1645589_8 SAM-dependent RNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000676 218.0
CMS1_k127_1645589_9 Domain of unknown function (DUF4145) - - - 0.000000000000000000000000000000000000000000000000000000000001217 212.0
CMS1_k127_164573_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.585e-291 910.0
CMS1_k127_164573_1 PFAM FeoA K04758 - - 0.0000000000000000000000000000004837 123.0
CMS1_k127_1646491_0 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000287 164.0
CMS1_k127_1646491_1 PFAM glycoside hydrolase family 13 domain protein - - - 0.00000000000000000000001234 109.0
CMS1_k127_1646491_2 - - - - 0.0000000000000001734 90.0
CMS1_k127_1648429_0 amino acid carrier protein K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007908 277.0
CMS1_k127_1648429_1 helical bimodular (HBM) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000008178 229.0
CMS1_k127_1648429_2 PFAM Cache K08738 - - 0.0000000000000000000009136 102.0
CMS1_k127_1674081_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 395.0
CMS1_k127_1674081_1 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000006435 184.0
CMS1_k127_1674081_2 ATP-grasp domain - - - 0.00000002012 59.0
CMS1_k127_167970_0 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 487.0
CMS1_k127_167970_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 314.0
CMS1_k127_167970_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000008764 254.0
CMS1_k127_167970_3 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000004608 147.0
CMS1_k127_167970_4 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000005373 138.0
CMS1_k127_167970_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0001049 53.0
CMS1_k127_1681328_0 MacB-like periplasmic core domain K02004 - - 3.363e-249 799.0
CMS1_k127_1681328_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 294.0
CMS1_k127_1686015_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.136e-321 989.0
CMS1_k127_1686015_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 327.0
CMS1_k127_1686015_2 PFAM transcription factor CarD K07736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004657 252.0
CMS1_k127_1686015_3 Fe-S cluster domain protein - - - 0.00000000000000000000000000000000000001194 147.0
CMS1_k127_1689674_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.061e-208 683.0
CMS1_k127_1689674_1 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 1.501e-205 647.0
CMS1_k127_1689674_10 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005381 253.0
CMS1_k127_1689674_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000006232 235.0
CMS1_k127_1689674_12 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000008244 216.0
CMS1_k127_1689674_13 CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000003507 219.0
CMS1_k127_1689674_14 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000003471 228.0
CMS1_k127_1689674_15 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000009009 196.0
CMS1_k127_1689674_16 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00000000000000000000000000000000000000000000006302 176.0
CMS1_k127_1689674_17 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000001321 169.0
CMS1_k127_1689674_18 Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms K07216 - - 0.000000000000000000000000000000000000000000005419 173.0
CMS1_k127_1689674_19 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000104 172.0
CMS1_k127_1689674_2 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007352 606.0
CMS1_k127_1689674_20 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000001858 163.0
CMS1_k127_1689674_21 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000001669 73.0
CMS1_k127_1689674_22 regulation of RNA biosynthetic process - - - 0.000838 46.0
CMS1_k127_1689674_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 620.0
CMS1_k127_1689674_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 587.0
CMS1_k127_1689674_5 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 487.0
CMS1_k127_1689674_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 466.0
CMS1_k127_1689674_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 447.0
CMS1_k127_1689674_8 helical bimodular (HBM) domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 387.0
CMS1_k127_1689674_9 PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 327.0
CMS1_k127_1694546_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 2.263e-196 619.0
CMS1_k127_1694546_1 TIGRFAM ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD K16013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 574.0
CMS1_k127_1694546_2 TIGRFAM ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC K16012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 478.0
CMS1_k127_1695082_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 394.0
CMS1_k127_1695082_1 Nitrite and sulphite reductase 4Fe-4S domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001869 260.0
CMS1_k127_1696015_0 Response regulator, receiver - - - 0.000000000000000000000000000000000000000008892 159.0
CMS1_k127_170759_0 PFAM Sulphate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 447.0
CMS1_k127_170759_1 Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000000004116 157.0
CMS1_k127_170759_2 Uncharacterised protein family UPF0066 - - - 0.000000000000001303 77.0
CMS1_k127_1713868_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 1.022e-216 682.0
CMS1_k127_1713868_1 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 3.327e-200 639.0
CMS1_k127_1727540_0 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 4.758e-205 646.0
CMS1_k127_1727540_2 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000001828 139.0
CMS1_k127_1727540_3 DNA integration K04763 - - 0.0000000000000001124 88.0
CMS1_k127_1738896_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 495.0
CMS1_k127_1738896_1 Coenzyme A transferase K01026 - 2.8.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 482.0
CMS1_k127_1738896_2 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 421.0
CMS1_k127_1738896_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005227 252.0
CMS1_k127_1738896_4 helix_turn_helix isocitrate lyase regulation K02624 - - 0.000000000000000000000000000000000004487 147.0
CMS1_k127_1738896_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000004644 96.0
CMS1_k127_173946_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.247e-209 659.0
CMS1_k127_173946_1 - - - - 0.000000000000000000000000000000000000000000000000000000001712 207.0
CMS1_k127_173946_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000003959 138.0
CMS1_k127_176004_0 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000005815 226.0
CMS1_k127_176004_1 - - - - 0.00000000000000000000000000003379 124.0
CMS1_k127_176004_2 PAS fold - - - 0.0001065 51.0
CMS1_k127_177067_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 4.525e-204 643.0
CMS1_k127_177067_1 4Fe-4S single cluster domain - - - 1.338e-197 620.0
CMS1_k127_177067_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 569.0
CMS1_k127_177067_3 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 418.0
CMS1_k127_177067_4 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000001902 234.0
CMS1_k127_177067_5 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000004025 198.0
CMS1_k127_177067_6 Polyketide synthase dehydratase - - - 0.0000000000000000000000000000000000000000000000009863 193.0
CMS1_k127_179262_0 ABC-Type Dipeptide Transport System Periplasmic Component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 580.0
CMS1_k127_179262_1 nitrogen compound transport K02033,K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 419.0
CMS1_k127_179262_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000007256 190.0
CMS1_k127_179262_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000001339 178.0
CMS1_k127_179262_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000003143 112.0
CMS1_k127_1796157_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 1.297e-203 640.0
CMS1_k127_1796157_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 8.255e-203 640.0
CMS1_k127_1796157_10 Uracil-DNA glycosylase - - - 0.000000000001637 68.0
CMS1_k127_1796157_11 MacB-like periplasmic core domain K02004 - - 0.000000002863 58.0
CMS1_k127_1796157_12 COG2199 FOG GGDEF domain - - - 0.000002763 60.0
CMS1_k127_1796157_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 394.0
CMS1_k127_1796157_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 335.0
CMS1_k127_1796157_4 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 307.0
CMS1_k127_1796157_5 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 301.0
CMS1_k127_1796157_6 ThiF family K03148 - 2.7.7.73 0.000000000000000000000000000000000000000000000000000000000000000000000000002542 263.0
CMS1_k127_1796157_7 helix_turn_helix ASNC type K03718,K03719 - - 0.00000000000000000000000000000000000000000000008721 173.0
CMS1_k127_1796157_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000041 130.0
CMS1_k127_1796157_9 Mut7-C ubiquitin - - - 0.0000000000000000001734 89.0
CMS1_k127_1799693_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 391.0
CMS1_k127_1799693_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 367.0
CMS1_k127_1799693_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 309.0
CMS1_k127_1799693_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001123 247.0
CMS1_k127_1803666_0 histidine kinase A domain protein - - - 0.00000000000000000000001151 117.0
CMS1_k127_1803666_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000006058 95.0
CMS1_k127_1803666_2 Psort location CytoplasmicMembrane, score - - - 0.00000000000009002 79.0
CMS1_k127_1804534_0 Pyridine nucleotide-disulphide oxidoreductase - - - 1.026e-261 826.0
CMS1_k127_1804534_1 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 415.0
CMS1_k127_1804534_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008635 388.0
CMS1_k127_1804534_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 311.0
CMS1_k127_1804534_4 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 303.0
CMS1_k127_1804964_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 2.424e-195 655.0
CMS1_k127_1804964_1 Surface antigen K07277 - - 4.971e-194 637.0
CMS1_k127_1804964_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 539.0
CMS1_k127_1804964_3 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 379.0
CMS1_k127_1804964_4 WbqC-like protein family - - - 0.0000000000000000000000000000000000000000000000000000000000002656 221.0
CMS1_k127_1804964_5 - - - - 0.00000000000000000000000000000000000000000000000000000000009171 209.0
CMS1_k127_1804964_6 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000005317 168.0
CMS1_k127_1804964_7 - - - - 0.00000000000000005511 93.0
CMS1_k127_1819466_0 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003344 282.0
CMS1_k127_1819466_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000008119 171.0
CMS1_k127_1819466_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000001083 134.0
CMS1_k127_1819466_3 esterase of the alpha-beta hydrolase superfamily - - - 0.0004585 44.0
CMS1_k127_1823604_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 9.656e-224 709.0
CMS1_k127_1823604_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 9.387e-223 704.0
CMS1_k127_1823604_10 PFAM Outer membrane K06142 - - 0.0000000000000000000002375 103.0
CMS1_k127_1823604_2 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 381.0
CMS1_k127_1823604_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 380.0
CMS1_k127_1823604_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 358.0
CMS1_k127_1823604_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 337.0
CMS1_k127_1823604_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 306.0
CMS1_k127_1823604_7 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
CMS1_k127_1823604_8 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000002933 192.0
CMS1_k127_1823604_9 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000249 197.0
CMS1_k127_1825091_0 Adenylate and Guanylate cyclase catalytic domain - - - 8.522e-200 664.0
CMS1_k127_1825091_1 Glycosyl transferase family group 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 491.0
CMS1_k127_1825091_10 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000002531 181.0
CMS1_k127_1825091_11 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000001586 186.0
CMS1_k127_1825091_12 Guanylyl transferase CofC like K09931 - - 0.00000000000000000000000000000000000000000001199 172.0
CMS1_k127_1825091_13 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000002974 176.0
CMS1_k127_1825091_14 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000006471 169.0
CMS1_k127_1825091_15 Tyrosine phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000003792 158.0
CMS1_k127_1825091_16 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000001576 147.0
CMS1_k127_1825091_17 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000001703 131.0
CMS1_k127_1825091_18 Membrane - - - 0.000000000000000000000000002195 120.0
CMS1_k127_1825091_19 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.00000000000000000000000002243 115.0
CMS1_k127_1825091_2 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 346.0
CMS1_k127_1825091_20 - - - - 0.00000007245 59.0
CMS1_k127_1825091_21 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00004836 53.0
CMS1_k127_1825091_22 PQQ-like domain K00117 - 1.1.5.2 0.0001025 54.0
CMS1_k127_1825091_3 Radical SAM superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 316.0
CMS1_k127_1825091_4 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 318.0
CMS1_k127_1825091_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 308.0
CMS1_k127_1825091_6 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003227 267.0
CMS1_k127_1825091_7 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001477 226.0
CMS1_k127_1825091_8 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000005541 221.0
CMS1_k127_1825091_9 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000007366 205.0
CMS1_k127_1825313_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 296.0
CMS1_k127_1825313_1 AraC protein, arabinose-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004366 261.0
CMS1_k127_1825313_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000005594 227.0
CMS1_k127_1825313_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000139 172.0
CMS1_k127_182605_0 Oxidoreductase NAD-binding domain K15765 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 329.0
CMS1_k127_182605_1 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 325.0
CMS1_k127_182605_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K16950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002427 275.0
CMS1_k127_182605_3 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000000000000000001906 165.0
CMS1_k127_182605_4 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000007099 156.0
CMS1_k127_1829464_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 2.147e-248 771.0
CMS1_k127_1829464_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 293.0
CMS1_k127_1829464_2 - - - - 0.00000000000000000000000004563 108.0
CMS1_k127_1829464_3 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000008707 82.0
CMS1_k127_1829464_4 Cbs domain - - - 0.000000004934 63.0
CMS1_k127_1830633_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 537.0
CMS1_k127_1830633_1 PFAM 4Fe-4S K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 377.0
CMS1_k127_1830633_2 PFAM 4Fe-4S K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000001613 233.0
CMS1_k127_1830633_3 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000002005 204.0
CMS1_k127_1830633_4 Cytochrome c - - - 0.000000000000000000000000000000000000000001098 164.0
CMS1_k127_1833118_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K05587,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.0 1005.0
CMS1_k127_1833118_1 Putative Fe-S cluster - - - 5.608e-257 809.0
CMS1_k127_1833118_10 PilZ domain - - - 0.0000000000000000000004056 100.0
CMS1_k127_1833118_11 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000001868 82.0
CMS1_k127_1833118_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 502.0
CMS1_k127_1833118_3 Purine nucleoside phosphorylase involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 366.0
CMS1_k127_1833118_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 312.0
CMS1_k127_1833118_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000003384 252.0
CMS1_k127_1833118_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
CMS1_k127_1833118_7 chain release factor K15034 - - 0.0000000000000000000000000000000000000000000005397 170.0
CMS1_k127_1833118_8 DRTGG domain - - - 0.00000000000000000000000000000000000000002371 155.0
CMS1_k127_1833118_9 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.0000000000000000000000001427 112.0
CMS1_k127_1834275_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000732 264.0
CMS1_k127_1834275_1 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000005674 211.0
CMS1_k127_1834275_2 - - - - 0.000000000000000000000000000305 122.0
CMS1_k127_1834275_3 HD domain K07023 - - 0.00000000001318 67.0
CMS1_k127_1834275_4 PFAM ThiamineS - - - 0.00000000009461 62.0
CMS1_k127_1836690_0 Cytochrome c5530 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 622.0
CMS1_k127_1836690_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 357.0
CMS1_k127_1836690_10 Transposase K07491 - - 0.0002146 48.0
CMS1_k127_1836690_2 Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 333.0
CMS1_k127_1836690_3 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003558 258.0
CMS1_k127_1836690_4 acetyltransferase - - - 0.0000000000000000000000000000007873 126.0
CMS1_k127_1836690_5 SIR2-like domain - - - 0.0000000000000000000006555 108.0
CMS1_k127_1836690_6 SEC-C Motif Domain Protein - - - 0.000000000001997 78.0
CMS1_k127_1836690_7 Cupin - - - 0.00000000002317 69.0
CMS1_k127_1836690_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000005626 54.0
CMS1_k127_1836690_9 Phage integrase, N-terminal SAM-like domain - - - 0.0000002078 56.0
CMS1_k127_1838637_0 ATP-dependent DNA helicase RecQ K03654,K13730 - 3.6.4.12 0.0 1881.0
CMS1_k127_1838637_1 helicase superfamily c-terminal domain - - - 3.278e-319 1000.0
CMS1_k127_1838637_2 transcriptional regulator K14414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 302.0
CMS1_k127_1838637_3 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000001231 93.0
CMS1_k127_1838637_4 DNA recombination - - - 0.0000000000001977 82.0
CMS1_k127_1838637_5 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000003939 72.0
CMS1_k127_1838637_6 Type VI secretion system effector, Hcp K06887,K11903 - - 0.000000001255 62.0
CMS1_k127_1838637_7 Recombinase K06400 - - 0.000006218 55.0
CMS1_k127_1838637_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00008184 52.0
CMS1_k127_1839596_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 4.296e-235 733.0
CMS1_k127_1839596_1 Catalyzes the formation of protocatechuate from 4-hydroxybenzoate K00481,K05712 - 1.14.13.127,1.14.13.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 548.0
CMS1_k127_1839596_10 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000000000000000663 98.0
CMS1_k127_1839596_11 Adenylosuccinate lyase C-terminus K01857 - 5.5.1.2 0.00000008048 57.0
CMS1_k127_1839596_13 helix_turn_helix, cAMP Regulatory protein - - - 0.0001401 51.0
CMS1_k127_1839596_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 434.0
CMS1_k127_1839596_3 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 407.0
CMS1_k127_1839596_4 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 362.0
CMS1_k127_1839596_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K01055,K14727 - 3.1.1.24,4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 311.0
CMS1_k127_1839596_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 314.0
CMS1_k127_1839596_7 Dioxygenase K00448 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004008 268.0
CMS1_k127_1839596_8 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000001288 182.0
CMS1_k127_1839596_9 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000001071 159.0
CMS1_k127_1840668_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.0 1403.0
CMS1_k127_1840668_1 Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 365.0
CMS1_k127_1840668_2 Bacterial regulatory protein, Fis family - - - 0.0004566 43.0
CMS1_k127_1843519_0 Coenzyme A transferase K01026 - 2.8.3.1 1.005e-294 917.0
CMS1_k127_1843519_1 Protein of unknown function (DUF3141) - - - 6.85e-270 849.0
CMS1_k127_1843519_2 Resolvase, N terminal domain K14060 - - 0.0000004287 53.0
CMS1_k127_1844270_0 Group II intron, maturase-specific domain - - - 3.135e-207 652.0
CMS1_k127_1844270_1 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000000000000000000000000000008523 140.0
CMS1_k127_1844270_2 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000001685 119.0
CMS1_k127_1844270_3 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000005965 133.0
CMS1_k127_1844270_4 PFAM transposase IS4 family protein - - - 0.00000000000000000000000006134 110.0
CMS1_k127_1844270_5 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K01083,K06131,K06915 - 3.1.3.8 0.00000000001091 78.0
CMS1_k127_1844270_6 Transposase Tn3 family protein - - - 0.0001491 49.0
CMS1_k127_1844660_0 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 342.0
CMS1_k127_1844660_1 Transcriptional Regulator, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000008913 210.0
CMS1_k127_1844660_2 - - - - 0.0008302 46.0
CMS1_k127_1845146_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 507.0
CMS1_k127_1845146_1 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 345.0
CMS1_k127_1845146_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001007 247.0
CMS1_k127_1845146_3 - - - - 0.000000000000000000000000000000000000000000000000000000000002023 219.0
CMS1_k127_1845146_4 -acetyltransferase K03829 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 - 0.00000000000000000000189 95.0
CMS1_k127_184560_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 568.0
CMS1_k127_184560_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 508.0
CMS1_k127_184560_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 336.0
CMS1_k127_184560_3 transcriptional regulator, AsnC family - - - 0.00000000000000000000000000000000000000000000000000000000375 203.0
CMS1_k127_184560_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000002083 99.0
CMS1_k127_184624_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000438 267.0
CMS1_k127_184624_1 Protein of unknown function (DUF1641) - - - 0.0000000000000000000000000000000000000000000000003701 183.0
CMS1_k127_184624_2 TIGRFAM Transcriptional regulator, Rrf2 - - - 0.00000000000000000000000000000000000002698 147.0
CMS1_k127_184624_3 PFAM response regulator receiver - - - 0.000000000000000000003689 100.0
CMS1_k127_184624_4 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000002606 56.0
CMS1_k127_1846908_0 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 347.0
CMS1_k127_1846908_1 Permease family K02824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 314.0
CMS1_k127_1846908_2 PFAM VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000002182 236.0
CMS1_k127_1846908_3 PFAM toluene tolerance family protein K07323 - - 0.00000000000000000000000000000000000000001254 160.0
CMS1_k127_1849261_0 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 4.939e-243 771.0
CMS1_k127_1849261_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 7.14e-207 657.0
CMS1_k127_1849261_10 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000003376 172.0
CMS1_k127_1849261_11 Double zinc ribbon - - - 0.00002438 57.0
CMS1_k127_1849261_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 566.0
CMS1_k127_1849261_3 aminotransferase class V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 551.0
CMS1_k127_1849261_4 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 518.0
CMS1_k127_1849261_5 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 465.0
CMS1_k127_1849261_6 Peptidoglycan-binding domain 1 protein K01185 - 3.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 382.0
CMS1_k127_1849261_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 357.0
CMS1_k127_1849261_8 Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid K00627,K05714,K10216,K10222,K10623 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0018771,GO:0019439,GO:0019622,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046164,GO:0046395,GO:0046435,GO:0052823,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 2.3.1.12,3.7.1.14,3.7.1.8,3.7.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 308.0
CMS1_k127_1849261_9 PFAM GumN family protein K09973 - - 0.0000000000000000000000000000000000000000000000000000003523 207.0
CMS1_k127_1850750_0 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 452.0
CMS1_k127_1850788_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 424.0
CMS1_k127_1850788_1 PFAM GGDEF domain containing protein K13590 - 2.7.7.65 0.0000000000000000000003343 102.0
CMS1_k127_1850788_2 Chalcone isomerase-like - - - 0.00000000000000005497 88.0
CMS1_k127_1850788_3 PHP-associated - - - 0.00000000000000009918 85.0
CMS1_k127_1852948_0 type III restriction protein res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 557.0
CMS1_k127_1852948_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000003837 228.0
CMS1_k127_1852948_2 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000001375 203.0
CMS1_k127_1852948_3 dna polymerase iii K02342 - 2.7.7.7 0.000000000000005762 75.0
CMS1_k127_1856733_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 446.0
CMS1_k127_1856733_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 405.0
CMS1_k127_1856733_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 373.0
CMS1_k127_1856733_3 - - - - 0.00001837 53.0
CMS1_k127_1867022_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 339.0
CMS1_k127_1867022_1 DsrE/DsrF-like family K06039 - - 0.0000000000000000000000000000000000000000000000003457 181.0
CMS1_k127_1867022_2 cellulose binding - - - 0.000000000000000000000000000000000000000006112 167.0
CMS1_k127_1867022_3 NlpC/P60 family K13694,K13695 - 3.4.17.13 0.0000000000000000000000000000000000002565 147.0
CMS1_k127_1874021_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.14e-199 633.0
CMS1_k127_1874021_1 SMART Nucleotide binding protein, PINc K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 601.0
CMS1_k127_1874021_2 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000803 121.0
CMS1_k127_1874021_3 Na -dependent transporter - - - 0.000000000000001559 86.0
CMS1_k127_1874021_4 PFAM Prolipoprotein diacylglyceryl transferase - - - 0.00000000000001885 83.0
CMS1_k127_1874021_5 PFAM prolipoprotein diacylglyceryl transferase - - - 0.00000000002939 65.0
CMS1_k127_1874021_6 Belongs to the HpcH HpaI aldolase family - - - 0.000000005532 59.0
CMS1_k127_1892617_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 331.0
CMS1_k127_1892617_1 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000000000000000000000000000007435 213.0
CMS1_k127_1892617_2 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000005979 192.0
CMS1_k127_1895062_0 'glutamate synthase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 527.0
CMS1_k127_1895062_1 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 494.0
CMS1_k127_1898929_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.303e-242 756.0
CMS1_k127_1898929_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 447.0
CMS1_k127_1898929_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 401.0
CMS1_k127_1898929_3 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 385.0
CMS1_k127_1898929_4 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 332.0
CMS1_k127_1898929_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004749 242.0
CMS1_k127_1898929_6 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000004238 175.0
CMS1_k127_1900226_0 PFAM Integrase core domain - - - 1.728e-218 687.0
CMS1_k127_1900226_1 Sodium:solute symporter family K03307 - - 5.141e-206 650.0
CMS1_k127_1900226_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000001878 93.0
CMS1_k127_1900226_11 Site-specific recombinases, DNA invertase Pin homologs K14060 - - 0.000000000004152 66.0
CMS1_k127_1900226_13 PFAM Integrase, catalytic core - - - 0.000006057 49.0
CMS1_k127_1900226_2 B12 binding domain K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 532.0
CMS1_k127_1900226_3 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 491.0
CMS1_k127_1900226_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007531 486.0
CMS1_k127_1900226_5 COGs COG3267 Type II secretory pathway component ExeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 406.0
CMS1_k127_1900226_6 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 357.0
CMS1_k127_1900226_7 PFAM Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002472 278.0
CMS1_k127_1900226_8 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000001176 215.0
CMS1_k127_1900226_9 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000001411 124.0
CMS1_k127_1902598_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 409.0
CMS1_k127_1902598_1 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000002798 185.0
CMS1_k127_1902598_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000002862 139.0
CMS1_k127_1902598_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000001127 91.0
CMS1_k127_1902598_4 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.00000000003732 66.0
CMS1_k127_1902988_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 409.0
CMS1_k127_1902988_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000003236 129.0
CMS1_k127_1903260_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 477.0
CMS1_k127_1903260_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000008794 154.0
CMS1_k127_1903260_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000001038 115.0
CMS1_k127_1908916_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 531.0
CMS1_k127_1908916_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 506.0
CMS1_k127_1908916_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002455 263.0
CMS1_k127_1908916_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000004737 252.0
CMS1_k127_1908916_4 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000003349 213.0
CMS1_k127_1908916_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000000000001782 202.0
CMS1_k127_1908916_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000007505 187.0
CMS1_k127_1908916_7 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000003018 165.0
CMS1_k127_1908916_8 energy transducer activity K03646,K03832 - - 0.0000000001177 62.0
CMS1_k127_1909190_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.698e-311 972.0
CMS1_k127_1911013_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 465.0
CMS1_k127_1911013_1 PFAM Histone deacetylase K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 392.0
CMS1_k127_1911013_2 class II (D K and N) K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 392.0
CMS1_k127_1912206_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.788e-211 672.0
CMS1_k127_1912206_1 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 600.0
CMS1_k127_1912206_2 Amino acid permease K03294,K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 522.0
CMS1_k127_1912206_3 COGs COG3146 conserved K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 418.0
CMS1_k127_1912206_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000003252 105.0
CMS1_k127_1914883_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 517.0
CMS1_k127_1914883_1 Signal Transduction Histidine Kinase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 488.0
CMS1_k127_1914883_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000001709 216.0
CMS1_k127_1920705_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 469.0
CMS1_k127_1920705_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000002477 213.0
CMS1_k127_1920705_2 response regulator K13599 - - 0.0001385 46.0
CMS1_k127_1923689_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 339.0
CMS1_k127_1923689_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009082 326.0
CMS1_k127_1923689_2 PFAM response regulator receiver K02485 - - 0.00000000000000000000000000000000000000000000000000000000001755 209.0
CMS1_k127_1923689_3 GGDEF domain - - - 0.0000000000000000000000006233 120.0
CMS1_k127_1923689_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000001312 96.0
CMS1_k127_1925636_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K11383 - 2.7.13.3 5.355e-256 799.0
CMS1_k127_1925636_1 Response regulator, receiver K11384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 412.0
CMS1_k127_1930227_0 Type VI secretion system, TssF K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 491.0
CMS1_k127_1930227_1 type VI secretion protein K11895 - - 0.000000000000000000000000000009412 128.0
CMS1_k127_1943326_0 containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 1.823e-198 630.0
CMS1_k127_1943326_1 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 408.0
CMS1_k127_1943326_2 dna polymerase iii K10857 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 297.0
CMS1_k127_1943326_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000000000000003316 221.0
CMS1_k127_1943326_4 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000000004623 108.0
CMS1_k127_1943326_5 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.000000001762 58.0
CMS1_k127_1943326_6 Domain of unknown function (DUF1127) - - - 0.0000004889 54.0
CMS1_k127_1943326_8 helix_turn_helix, arabinose operon control protein - - - 0.000008595 55.0
CMS1_k127_1943853_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000002737 186.0
CMS1_k127_1943853_1 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000001347 143.0
CMS1_k127_1943853_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000001387 99.0
CMS1_k127_1943853_3 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000003868 70.0
CMS1_k127_1946060_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1037.0
CMS1_k127_1946060_1 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 5.066e-240 760.0
CMS1_k127_1946060_2 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 510.0
CMS1_k127_1946060_3 PFAM GHMP kinase K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 393.0
CMS1_k127_1946060_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000001392 243.0
CMS1_k127_1946060_5 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000006447 226.0
CMS1_k127_1946060_6 - - - - 0.00000000000000000000000000000000000008839 142.0
CMS1_k127_1946060_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000000000000000004053 145.0
CMS1_k127_19473_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 9.831e-209 653.0
CMS1_k127_19473_1 Conserved carboxylase domain K01571,K01960 - 4.1.1.3,6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000001683 229.0
CMS1_k127_1948173_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568,K12137 - - 6.857e-273 850.0
CMS1_k127_1948173_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 7.083e-224 703.0
CMS1_k127_1948173_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000008631 170.0
CMS1_k127_1948173_11 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000002524 149.0
CMS1_k127_1948173_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000000006291 132.0
CMS1_k127_1948173_13 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000509 100.0
CMS1_k127_1948173_14 - - - - 0.00000000000000000004174 92.0
CMS1_k127_1948173_2 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 2.443e-218 684.0
CMS1_k127_1948173_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 574.0
CMS1_k127_1948173_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 516.0
CMS1_k127_1948173_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 460.0
CMS1_k127_1948173_6 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 408.0
CMS1_k127_1948173_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 291.0
CMS1_k127_1948173_8 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000001334 211.0
CMS1_k127_1948173_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000002192 170.0
CMS1_k127_1951879_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 553.0
CMS1_k127_1951879_1 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 548.0
CMS1_k127_1951879_2 Methyltransferase, chemotaxis proteins K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000002687 259.0
CMS1_k127_1951879_3 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000003097 149.0
CMS1_k127_1951879_4 - - - - 0.00000000000000000000000966 104.0
CMS1_k127_1951879_5 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000001094 102.0
CMS1_k127_1951879_6 Domain of unknown function (DUF4070) - - - 0.00001035 48.0
CMS1_k127_1954950_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 8.215e-292 925.0
CMS1_k127_1954950_1 Peptidase family M48 - - - 0.0000000000000000002538 100.0
CMS1_k127_1954950_2 - - - - 0.0000000000000001757 87.0
CMS1_k127_1954950_3 Belongs to the P(II) protein family - - - 0.000000000002419 68.0
CMS1_k127_1955182_0 Tripartite tricarboxylate transporter TctA family - - - 3.165e-226 712.0
CMS1_k127_1955182_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 7.884e-212 671.0
CMS1_k127_1955182_10 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000008658 246.0
CMS1_k127_1955182_11 signal-transduction protein with CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001028 252.0
CMS1_k127_1955182_12 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000001783 238.0
CMS1_k127_1955182_13 Xylose isomerase-like TIM barrel K01805 - 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000004004 239.0
CMS1_k127_1955182_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000001537 190.0
CMS1_k127_1955182_15 - - - - 0.000000000000000000000000000000000000000004997 164.0
CMS1_k127_1955182_16 FCD - - - 0.000000000000000000000000000000000008651 144.0
CMS1_k127_1955182_17 FCD - - - 0.000000000000000000000000000000002484 138.0
CMS1_k127_1955182_18 Protein of unknown function (DUF4019) - - - 0.000000000000000000000000005583 115.0
CMS1_k127_1955182_19 nerve growth factor signaling pathway K12460 GO:0000186,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008150,GO:0009719,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030165,GO:0030234,GO:0031323,GO:0031325,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032991,GO:0033674,GO:0038179,GO:0038180,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043549,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045859,GO:0045860,GO:0045937,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071900,GO:0071902,GO:0080090,GO:0097708,GO:0098772,GO:0120035,GO:1902531,GO:1902533,GO:1990089,GO:1990090,GO:2000026 - 0.00000000000000000000008857 106.0
CMS1_k127_1955182_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 553.0
CMS1_k127_1955182_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000711 494.0
CMS1_k127_1955182_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 458.0
CMS1_k127_1955182_5 kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 434.0
CMS1_k127_1955182_6 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 361.0
CMS1_k127_1955182_7 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 316.0
CMS1_k127_1955182_8 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K08302 - 4.1.2.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 289.0
CMS1_k127_1955182_9 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001256 277.0
CMS1_k127_1955456_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 8.668e-216 680.0
CMS1_k127_1955456_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 1.663e-207 653.0
CMS1_k127_1955456_10 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000005723 214.0
CMS1_k127_1955456_11 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.0000000000000000000000000000000000000000000000001608 181.0
CMS1_k127_1955456_12 Chalcone isomerase-like - - - 0.0000000000000000000000000000000000000007258 156.0
CMS1_k127_1955456_13 Ferritin-like domain - - - 0.00000000000000000000000000000000000002637 150.0
CMS1_k127_1955456_14 PFAM SH3, type 3 - - - 0.00000000000000000001559 101.0
CMS1_k127_1955456_15 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.0000000000000000003791 90.0
CMS1_k127_1955456_16 DNA-binding transcription factor activity K03892 - - 0.000000000000002413 80.0
CMS1_k127_1955456_2 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 518.0
CMS1_k127_1955456_3 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 511.0
CMS1_k127_1955456_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 488.0
CMS1_k127_1955456_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 400.0
CMS1_k127_1955456_6 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 291.0
CMS1_k127_1955456_7 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006998 303.0
CMS1_k127_1955456_8 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001031 273.0
CMS1_k127_1955456_9 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000006975 229.0
CMS1_k127_1956229_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 365.0
CMS1_k127_1956229_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 361.0
CMS1_k127_1956229_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 321.0
CMS1_k127_1956229_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000009475 253.0
CMS1_k127_1956229_4 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000002249 184.0
CMS1_k127_1956229_5 - - - - 0.00000000000000000381 84.0
CMS1_k127_1956229_6 monooxygenase activity - - - 0.000000000000893 72.0
CMS1_k127_1956229_7 cellulase activity - - - 0.00000000187 66.0
CMS1_k127_1957634_0 transporter antisigma-factor antagonist STAS K03321 - - 4.64e-322 1000.0
CMS1_k127_1957634_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02482 - 2.7.13.3 3.291e-206 656.0
CMS1_k127_1957634_10 PFAM response regulator receiver - - - 0.00000000000000000000000000000000006673 136.0
CMS1_k127_1957634_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 568.0
CMS1_k127_1957634_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 504.0
CMS1_k127_1957634_4 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 496.0
CMS1_k127_1957634_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003128 243.0
CMS1_k127_1957634_7 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000003358 190.0
CMS1_k127_1957634_8 PFAM histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000241 163.0
CMS1_k127_1959581_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 1.201e-275 858.0
CMS1_k127_1959581_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.827e-223 699.0
CMS1_k127_1959581_2 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 347.0
CMS1_k127_1959581_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000003915 256.0
CMS1_k127_1959581_4 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002864 181.0
CMS1_k127_1959581_5 cyclic nucleotide binding K10914,K12132,K21564 - 2.7.11.1 0.0000000000000000000000000000000000000000000000009467 180.0
CMS1_k127_1959581_6 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000001046 156.0
CMS1_k127_1959581_8 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000008916 126.0
CMS1_k127_1961437_0 56kDa selenium binding protein (SBP56) K17285 - - 3.221e-206 649.0
CMS1_k127_1961437_1 SCO1/SenC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 514.0
CMS1_k127_1961437_2 LUD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 331.0
CMS1_k127_1964757_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000001756 171.0
CMS1_k127_1964757_1 Universal stress protein - - - 0.0000000000000000000000002734 110.0
CMS1_k127_1964757_2 - - - - 0.0001162 50.0
CMS1_k127_1966139_0 Molybdopterin oxidoreductase Fe4S4 domain K02567 - - 1.137e-273 860.0
CMS1_k127_1966139_1 4Fe-4S binding domain K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000006467 235.0
CMS1_k127_1966139_2 Cytochrome c-type protein K02569,K03532 - - 0.000000000000000000000000000000000000000000000006062 181.0
CMS1_k127_1966139_3 heat shock protein binding - - - 0.00000000000000000000000000000000000000000004681 166.0
CMS1_k127_1966139_4 4Fe-4S binding domain K02573 - - 0.000000000000000000000000000000000000004341 150.0
CMS1_k127_1966139_5 Carboxysome Shell Carbonic Anhydrase - - - 0.000000000000000000000000000000000004867 139.0
CMS1_k127_1966139_6 PFAM response regulator receiver K07659,K11329 - - 0.0000000000000000003058 90.0
CMS1_k127_1969891_0 sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000001053 158.0
CMS1_k127_1969891_1 sister chromatid segregation - - - 0.0000000000000000006304 89.0
CMS1_k127_1969893_0 Polymorphic membrane protein Chlamydia - - - 0.000000000000000000000000000000002441 147.0
CMS1_k127_1969893_1 cellulose binding K15924 - 3.2.1.136 0.000000000000000000000000001074 129.0
CMS1_k127_1969893_2 sister chromatid segregation - - - 0.0000000000000000001943 91.0
CMS1_k127_1969893_3 Caspase domain - - - 0.000000000007158 78.0
CMS1_k127_1975208_0 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 455.0
CMS1_k127_1975208_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 332.0
CMS1_k127_1975208_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000008613 115.0
CMS1_k127_1984250_0 molybdenum-iron protein alpha chain K02586 - 1.18.6.1 2.692e-303 936.0
CMS1_k127_1984250_1 Belongs to the NifD NifK NifE NifN family K02587 - - 4.01e-247 768.0
CMS1_k127_1984250_10 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000002741 96.0
CMS1_k127_1984250_2 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.705e-242 754.0
CMS1_k127_1984250_3 Belongs to the NifD NifK NifE NifN family K02592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 613.0
CMS1_k127_1984250_4 cofactor biosynthesis protein NifB K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 606.0
CMS1_k127_1984250_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 352.0
CMS1_k127_1984250_6 Belongs to the P(II) protein family K02590 - - 0.0000000000000000000000000000000000000000000000000000007311 196.0
CMS1_k127_1984250_7 Belongs to the P(II) protein family K02589 - - 0.0000000000000000000000000000000000000000000000003846 176.0
CMS1_k127_1984250_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000006238 179.0
CMS1_k127_1984250_9 Ferredoxin - - - 0.000000000000000000000000000000000000000000000003782 175.0
CMS1_k127_1985828_0 Phosphate transporter family - - - 0.0 1047.0
CMS1_k127_1985828_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 529.0
CMS1_k127_1985828_10 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.00000000000000000000000000000006644 135.0
CMS1_k127_1985828_11 - - - - 0.0000000001291 68.0
CMS1_k127_1985828_2 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 519.0
CMS1_k127_1985828_3 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 484.0
CMS1_k127_1985828_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 507.0
CMS1_k127_1985828_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 450.0
CMS1_k127_1985828_6 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 366.0
CMS1_k127_1985828_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 335.0
CMS1_k127_1985828_8 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 314.0
CMS1_k127_1985828_9 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000002784 141.0
CMS1_k127_1992157_0 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 533.0
CMS1_k127_1992157_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 316.0
CMS1_k127_1992157_2 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000001109 88.0
CMS1_k127_1993567_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 7.665e-272 843.0
CMS1_k127_1993567_1 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002767 246.0
CMS1_k127_1993567_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000001457 208.0
CMS1_k127_1993567_3 - - - - 0.000000000000000000000000000000000000000000000000003875 191.0
CMS1_k127_1993567_4 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000008742 141.0
CMS1_k127_1993567_5 - - - - 0.00000000000000000000000001245 118.0
CMS1_k127_1994755_0 Type III secretion K03230 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 584.0
CMS1_k127_1994755_1 ATPase FliI YscN family K03224 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 544.0
CMS1_k127_1994755_10 FlhB HrpN YscU SpaS Family K03229 - - 0.00000000000000000000000000000000000000000000000000000000000002838 232.0
CMS1_k127_1994755_11 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000007198 192.0
CMS1_k127_1994755_12 COG4669 Type III secretory pathway, lipoprotein EscJ K03222 - - 0.000000000000000000000000000000000000000000000000005272 192.0
CMS1_k127_1994755_13 Type III secretion K03228 - - 0.000000000000000000000000000000000000000005537 164.0
CMS1_k127_1994755_14 Glycosyltransferase (GlcNAc) - - - 0.00000000000000000000000000000002791 145.0
CMS1_k127_1994755_15 HrpE/YscL/FliH and V-type ATPase subunit E K03223 - - 0.000000000000000000000007231 111.0
CMS1_k127_1994755_16 Inner membrane component of T3SS, periplasmic domain K03220 - - 0.00000000000000000000005085 113.0
CMS1_k127_1994755_17 protein secretion K03227 - - 0.00000000000004151 75.0
CMS1_k127_1994755_18 Type III flagellar switch regulator (C-ring) FliN C-term K03225 - - 0.000000003248 69.0
CMS1_k127_1994755_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 447.0
CMS1_k127_1994755_21 - - - - 0.0005888 50.0
CMS1_k127_1994755_3 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 439.0
CMS1_k127_1994755_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 396.0
CMS1_k127_1994755_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 399.0
CMS1_k127_1994755_6 Bacterial type II and III secretion system protein K03219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 315.0
CMS1_k127_1994755_7 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 322.0
CMS1_k127_1994755_8 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 290.0
CMS1_k127_1994755_9 FliP family - - - 0.000000000000000000000000000000000000000000000000000000000000000002858 232.0
CMS1_k127_2005718_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 511.0
CMS1_k127_2005718_1 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000385 190.0
CMS1_k127_2013149_0 Inner membrane protein CreD K06143 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 439.0
CMS1_k127_2013149_1 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000001751 241.0
CMS1_k127_2015975_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 294.0
CMS1_k127_2015975_1 - - - - 0.00000000000000000223 90.0
CMS1_k127_2015975_2 COG1802 Transcriptional regulators - - - 0.0009726 42.0
CMS1_k127_202267_0 ATP-dependent helicase K03579 - 3.6.4.13 2.548e-278 881.0
CMS1_k127_202267_1 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001719 257.0
CMS1_k127_202267_2 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000001178 108.0
CMS1_k127_2025830_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1015.0
CMS1_k127_2025830_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 553.0
CMS1_k127_2025830_2 HlyD family secretion protein K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 523.0
CMS1_k127_2025830_3 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 496.0
CMS1_k127_2025830_4 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 401.0
CMS1_k127_2025830_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007694 239.0
CMS1_k127_2026573_0 AMMECR1 K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 466.0
CMS1_k127_2029698_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.353e-260 812.0
CMS1_k127_2029698_1 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 512.0
CMS1_k127_2029698_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 419.0
CMS1_k127_2029698_3 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 402.0
CMS1_k127_2029698_4 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 283.0
CMS1_k127_2029698_5 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000001791 188.0
CMS1_k127_2029698_6 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000003096 109.0
CMS1_k127_2029698_7 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.0001367 48.0
CMS1_k127_2038185_0 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 - 2.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 360.0
CMS1_k127_2038185_1 Belongs to the precorrin methyltransferase family K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000006712 232.0
CMS1_k127_2040764_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.371e-280 869.0
CMS1_k127_2040764_1 PFAM type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 365.0
CMS1_k127_2040764_2 DivIVA protein K04074 - - 0.00000000000000000000000000000000000000000000000000000000000000006381 226.0
CMS1_k127_2040764_3 YGGT family K02221 - - 0.00000000000000000000000000000002152 129.0
CMS1_k127_2040764_4 thiamine diphosphate biosynthetic process - - - 0.00000000000222 70.0
CMS1_k127_2053898_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003681 278.0
CMS1_k127_2053898_1 DoxX family K15977 - - 0.00000001096 61.0
CMS1_k127_2056282_0 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003402 267.0
CMS1_k127_2056282_1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000001061 241.0
CMS1_k127_2056282_2 MltA-interacting MipA family protein K07274 - - 0.000000000000000000000000000000003855 138.0
CMS1_k127_2056282_3 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000005995 124.0
CMS1_k127_2056282_4 Carboxymuconolactone decarboxylase family - - - 0.0000001066 53.0
CMS1_k127_2061668_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 501.0
CMS1_k127_2061668_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000004141 213.0
CMS1_k127_2061668_2 Belongs to the UPF0109 family K06960 - - 0.000000000000004649 75.0
CMS1_k127_2061856_0 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000001649 250.0
CMS1_k127_2061856_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000001832 154.0
CMS1_k127_2061856_2 GnaT family - - - 0.00000000000000000000000000001072 124.0
CMS1_k127_2061856_3 MoaE protein K03635 - 2.8.1.12 0.0000000000001251 71.0
CMS1_k127_2069462_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 559.0
CMS1_k127_2069462_1 Carboxylesterase family K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 319.0
CMS1_k127_2069462_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 315.0
CMS1_k127_2069462_3 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000003427 252.0
CMS1_k127_2077551_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 0.0 1326.0
CMS1_k127_2077551_1 PFAM 4Fe-4S K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 492.0
CMS1_k127_2077551_2 Nitronate monooxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 358.0
CMS1_k127_2077551_3 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
CMS1_k127_2077551_4 - - - - 0.000000000000000000000000000000000000000000000000000000000795 209.0
CMS1_k127_2077551_5 anaerobic respiration K02568 - - 0.0000000000000000000000000000000000000000000000000000007006 200.0
CMS1_k127_2077551_6 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000001226 181.0
CMS1_k127_2077551_7 - - - - 0.00000000000000000000008835 100.0
CMS1_k127_2090206_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.909e-288 889.0
CMS1_k127_2090206_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.65e-285 877.0
CMS1_k127_2090206_10 - - - - 0.00000000000006281 72.0
CMS1_k127_2090206_11 - - - - 0.000000007407 57.0
CMS1_k127_2090206_12 - - - - 0.000001696 52.0
CMS1_k127_2090206_13 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0003761 47.0
CMS1_k127_2090206_14 - - - - 0.0006591 45.0
CMS1_k127_2090206_2 Endoribonuclease that initiates mRNA decay K18682 - - 5.77e-236 739.0
CMS1_k127_2090206_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 602.0
CMS1_k127_2090206_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 417.0
CMS1_k127_2090206_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009858 243.0
CMS1_k127_2090206_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000003656 184.0
CMS1_k127_2090206_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000003163 183.0
CMS1_k127_2090206_8 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000001554 137.0
CMS1_k127_2090206_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000001828 130.0
CMS1_k127_2096643_0 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 583.0
CMS1_k127_2096643_1 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 338.0
CMS1_k127_2096643_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
CMS1_k127_2096643_3 PFAM Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000009717 238.0
CMS1_k127_2096643_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000006733 196.0
CMS1_k127_2096643_5 lyase activity - - - 0.00000000000000000000000000000000000000000000000000004255 209.0
CMS1_k127_2096643_6 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000001287 119.0
CMS1_k127_2096643_7 Belongs to the UPF0109 family K06960 - - 0.0000004232 51.0
CMS1_k127_2096643_8 Belongs to the UPF0109 family K06960 - - 0.00006371 46.0
CMS1_k127_210194_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 619.0
CMS1_k127_210194_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009797 572.0
CMS1_k127_210194_10 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000005714 229.0
CMS1_k127_210194_11 Peptidase family M54 K06974 - - 0.0000000000000000000000000000759 122.0
CMS1_k127_210194_12 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000007365 81.0
CMS1_k127_210194_13 TIR domain - - - 0.0000000000001069 71.0
CMS1_k127_210194_14 ABC transporter substrate binding protein - - - 0.0002482 53.0
CMS1_k127_210194_2 PFAM sigma-54 factor interaction domain-containing protein K03721 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 560.0
CMS1_k127_210194_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 493.0
CMS1_k127_210194_4 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 417.0
CMS1_k127_210194_5 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 408.0
CMS1_k127_210194_6 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 310.0
CMS1_k127_210194_7 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001728 295.0
CMS1_k127_210194_8 PFAM glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001393 255.0
CMS1_k127_210194_9 amino acid transport K02030 - - 0.000000000000000000000000000000000000000000000000000000000000005191 224.0
CMS1_k127_2109705_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 523.0
CMS1_k127_2109705_1 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000004057 177.0
CMS1_k127_2109705_2 - - - - 0.0000000000000000000000000000000000000000107 161.0
CMS1_k127_2109705_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000006252 113.0
CMS1_k127_2111366_0 pfam abc-1 K03688 - - 3.507e-207 659.0
CMS1_k127_2111366_1 Domain of unknown function (DUF4445) - - - 7.069e-199 632.0
CMS1_k127_2111366_2 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 478.0
CMS1_k127_2111366_3 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 439.0
CMS1_k127_2111366_4 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 372.0
CMS1_k127_2111366_5 Permease family K02824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 358.0
CMS1_k127_2111366_6 PFAM Silent information regulator protein Sir2 K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 314.0
CMS1_k127_2111366_7 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 289.0
CMS1_k127_2111366_8 L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 287.0
CMS1_k127_2111366_9 granule-associated protein - - - 0.0000000000000000007642 90.0
CMS1_k127_211402_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.66e-240 747.0
CMS1_k127_211402_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 527.0
CMS1_k127_211402_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000008597 255.0
CMS1_k127_211402_3 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000001897 268.0
CMS1_k127_211402_4 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000001887 121.0
CMS1_k127_211402_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000009335 91.0
CMS1_k127_211771_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004737 267.0
CMS1_k127_211771_1 Cytochrome b5-like Heme/Steroid binding domain - - - 0.000000000000000000000000000000000000000000005133 167.0
CMS1_k127_211771_2 - - - - 0.000000000000000000000000000000000000462 146.0
CMS1_k127_211771_3 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000007318 118.0
CMS1_k127_2123562_0 galactose-1-phosphate uridylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009302 429.0
CMS1_k127_2123562_1 HMGL-like K01666 - 4.1.3.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 418.0
CMS1_k127_2123562_2 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 400.0
CMS1_k127_2123562_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001469 271.0
CMS1_k127_2123562_4 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000003389 207.0
CMS1_k127_2123562_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) - - - 0.00000000000000000000000000000000000000000000000000000008431 203.0
CMS1_k127_2123562_6 DoxX - - - 0.000000000000000000000000000000000000000000000000331 182.0
CMS1_k127_2123562_7 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000001156 178.0
CMS1_k127_2123562_8 TIGRFAM C_GCAxxG_C_C family protein - - - 0.000000000000000000000001039 111.0
CMS1_k127_212745_0 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 431.0
CMS1_k127_212745_1 response regulator K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 349.0
CMS1_k127_212745_2 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 358.0
CMS1_k127_212745_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000009246 55.0
CMS1_k127_2130568_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 0.0 1283.0
CMS1_k127_2130568_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0 1255.0
CMS1_k127_2130568_10 phosphohistidine phosphatase, SixA - - - 0.00000000000000000000000000000254 128.0
CMS1_k127_2130568_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000007349 86.0
CMS1_k127_2130568_12 - - - - 0.000000000000005662 77.0
CMS1_k127_2130568_2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 1.278e-216 677.0
CMS1_k127_2130568_3 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045250,GO:0045252,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046496,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0097159,GO:0106077,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 610.0
CMS1_k127_2130568_4 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 489.0
CMS1_k127_2130568_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 438.0
CMS1_k127_2130568_6 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 411.0
CMS1_k127_2130568_7 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002765 236.0
CMS1_k127_2130568_8 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
CMS1_k127_2130568_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000000000000000000000002336 199.0
CMS1_k127_2136963_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 613.0
CMS1_k127_2136963_1 PAS PAC sensor hybrid histidine kinase - - - 0.0000001766 56.0
CMS1_k127_2141327_0 PFAM Glycosyltransferase family 25 (LPS biosynthesis protein) - - - 0.00000000000000000000000000000000000000000000000000000005208 203.0
CMS1_k127_2141327_1 - - - - 0.0000000000000000000000000000000000000002478 153.0
CMS1_k127_2141327_2 MMPL family K07003 - - 0.000000003842 61.0
CMS1_k127_2143097_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 384.0
CMS1_k127_2143097_1 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 338.0
CMS1_k127_2143097_2 ABC transporter K02003 - - 0.000000000000000000001663 96.0
CMS1_k127_2147196_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1024.0
CMS1_k127_214842_0 PFAM peptidase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 465.0
CMS1_k127_214842_1 PFAM Xylose - - - 0.000000000000000000000000006687 116.0
CMS1_k127_214842_2 - - - - 0.0000000000002415 73.0
CMS1_k127_2151621_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1596.0
CMS1_k127_2151621_1 Belongs to the thiolase family K00626 - 2.3.1.9 1.829e-198 626.0
CMS1_k127_2151621_2 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 473.0
CMS1_k127_2151621_3 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000007259 89.0
CMS1_k127_2157985_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.618e-306 946.0
CMS1_k127_2157985_1 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 491.0
CMS1_k127_2157985_2 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 401.0
CMS1_k127_2157985_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K12420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 382.0
CMS1_k127_2157985_4 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 317.0
CMS1_k127_2157985_5 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 308.0
CMS1_k127_2157985_6 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 290.0
CMS1_k127_2157985_7 PFAM ThiamineS - - - 0.00000000000000176 80.0
CMS1_k127_2168768_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002366 279.0
CMS1_k127_2168768_1 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000009283 234.0
CMS1_k127_2168768_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000002508 195.0
CMS1_k127_217037_0 glutamate decarboxylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 543.0
CMS1_k127_217037_1 Belongs to the UPF0597 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 344.0
CMS1_k127_217037_2 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000000000000000002971 184.0
CMS1_k127_217037_3 Peptidase family M48 - - - 0.0000000000000000000000000000000001147 136.0
CMS1_k127_217037_5 Cro/C1-type HTH DNA-binding domain K07727 - - 0.0000000000000000000000000005989 120.0
CMS1_k127_2187843_0 Belongs to the heat shock protein 70 family - - - 0.0 1158.0
CMS1_k127_2187843_1 Belongs to the heat shock protein 70 family - - - 8.066e-245 769.0
CMS1_k127_2187843_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 329.0
CMS1_k127_2187843_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000003056 244.0
CMS1_k127_2187843_4 Fungalysin metallopeptidase (M36) - - - 0.0000000000000000000000000000000000000000000000000000000003167 223.0
CMS1_k127_2187843_5 Domain of unknown function (DUF2760) - - - 0.0000000000000000000000000000000000000000000000000003157 195.0
CMS1_k127_2193284_0 Gaf domain - - - 7.782e-213 686.0
CMS1_k127_2193284_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 347.0
CMS1_k127_2193284_2 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000257 293.0
CMS1_k127_2193284_3 Universal stress protein - - - 0.0000000000000000000000000000000000001315 145.0
CMS1_k127_2195241_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 581.0
CMS1_k127_2195241_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 481.0
CMS1_k127_2195241_2 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000005152 222.0
CMS1_k127_21966_0 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 454.0
CMS1_k127_21966_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 409.0
CMS1_k127_21966_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 402.0
CMS1_k127_21966_3 VWA containing CoxE family protein K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003686 276.0
CMS1_k127_21966_4 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000002344 188.0
CMS1_k127_21966_5 - - - - 0.0000000000000000000000000000000003665 137.0
CMS1_k127_21966_6 Belongs to the bacterial histone-like protein family K05788 - - 0.000000000000000000000000002753 117.0
CMS1_k127_21966_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000003374 79.0
CMS1_k127_2203596_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 1.21e-229 722.0
CMS1_k127_2203596_1 Aminotransferase class-III K00819 - 2.6.1.13 4.304e-217 677.0
CMS1_k127_2203596_2 PFAM response regulator receiver K07659,K11329 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000271 280.0
CMS1_k127_2203596_3 Transcriptional regulator K19776 - - 0.000000000000000000000000000000000000000000000000000000000000000000001132 243.0
CMS1_k127_2203596_4 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 - 2.7.7.77 0.000000000000000000000000000000000000000000000000003028 193.0
CMS1_k127_2203596_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000003249 146.0
CMS1_k127_2203596_6 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000006956 112.0
CMS1_k127_2224822_0 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 586.0
CMS1_k127_2224822_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000006538 83.0
CMS1_k127_2225279_0 Seven times multi-haem cytochrome CxxCH - - - 2.203e-266 824.0
CMS1_k127_2225279_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 602.0
CMS1_k127_2225279_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000001491 124.0
CMS1_k127_2225279_11 Rhodanese Homology Domain - - - 0.000000000000000000000000000001511 127.0
CMS1_k127_2225279_12 Class III cytochrome C family - - - 0.0000000000000000000000008546 109.0
CMS1_k127_2225279_13 4Fe-4S single cluster domain K05337 - - 0.000000000000000000305 89.0
CMS1_k127_2225279_2 TIGRFAM cysteine synthase A K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 452.0
CMS1_k127_2225279_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 424.0
CMS1_k127_2225279_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 366.0
CMS1_k127_2225279_5 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009299 353.0
CMS1_k127_2225279_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 322.0
CMS1_k127_2225279_7 PFAM NapC NirT cytochrome c K02569,K03532 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 302.0
CMS1_k127_2225279_8 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 316.0
CMS1_k127_2225279_9 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001323 303.0
CMS1_k127_2228095_0 TRAP transporter, 4TM 12TM fusion protein' - - - 3.552e-298 925.0
CMS1_k127_2228095_1 CoA-transferase family III - - - 1.46e-201 633.0
CMS1_k127_2228095_2 Trap transporter solute receptor K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 486.0
CMS1_k127_2228095_3 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 364.0
CMS1_k127_2228095_4 helix_turn _helix lactose operon repressor K06145 - - 0.00000000000000000000000000000000000000000000000000000000005903 210.0
CMS1_k127_2228095_5 PFAM Electron transfer flavoprotein alpha K03522 - - 0.000000000000000000000007628 100.0
CMS1_k127_223074_0 His Kinase A (phosphoacceptor) domain K10819 - 2.7.13.3 3.852e-280 872.0
CMS1_k127_223074_1 Periplasmic binding protein - - - 7.301e-195 613.0
CMS1_k127_223074_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 514.0
CMS1_k127_223074_3 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003974 262.0
CMS1_k127_223074_4 PFAM DoxX family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001712 248.0
CMS1_k127_223074_5 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000001388 223.0
CMS1_k127_223074_6 Redoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000002514 205.0
CMS1_k127_223074_7 - - - - 0.000000000000000000000001316 106.0
CMS1_k127_223074_8 cell redox homeostasis - - - 0.0000000000000000003253 94.0
CMS1_k127_2233985_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 385.0
CMS1_k127_2233985_1 Iron-containing alcohol dehydrogenase K00001,K01714,K13954 - 1.1.1.1,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 381.0
CMS1_k127_2233985_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 362.0
CMS1_k127_2239199_0 BNR repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 402.0
CMS1_k127_2241332_0 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 421.0
CMS1_k127_2241332_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 406.0
CMS1_k127_2241332_10 Histidine kinase - - - 0.000000000000000000001091 102.0
CMS1_k127_2241332_11 Histidine kinase K02660,K11525 - - 0.0000000006353 68.0
CMS1_k127_2241332_12 FIST N domain - - - 0.000000004986 67.0
CMS1_k127_2241332_13 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.000003884 52.0
CMS1_k127_2241332_14 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex - - - 0.00008354 49.0
CMS1_k127_2241332_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001086 274.0
CMS1_k127_2241332_3 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000736 259.0
CMS1_k127_2241332_4 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001555 214.0
CMS1_k127_2241332_5 response regulator - - - 0.00000000000000000000000000000000000000000000000000000003543 205.0
CMS1_k127_2241332_6 PFAM 4-vinyl reductase, 4VR K07013 - - 0.0000000000000000000000000000000000000000000003295 169.0
CMS1_k127_2241332_7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000000000000000000000000000000000001345 153.0
CMS1_k127_2241332_8 COG2346, Truncated hemoglobins K06886 - - 0.0000000000000000000000000000004298 128.0
CMS1_k127_2241332_9 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000008635 98.0
CMS1_k127_2246964_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 391.0
CMS1_k127_2246964_2 PFAM peptidase S1 and S6 chymotrypsin Hap K08070 - 1.3.1.74 0.00000000001444 67.0
CMS1_k127_225933_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 410.0
CMS1_k127_225933_1 Flagellar motor switch protein FliN K02417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009856 320.0
CMS1_k127_225933_2 Chemotaxis protein CheY K02481 - - 0.0007567 47.0
CMS1_k127_2259751_0 TIGRFAM DNA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 391.0
CMS1_k127_2259751_1 Bacterial extracellular solute-binding protein K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 368.0
CMS1_k127_2259751_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 309.0
CMS1_k127_2259751_3 ABC transporter K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000244 205.0
CMS1_k127_2259751_4 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000004341 57.0
CMS1_k127_2272369_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 512.0
CMS1_k127_2273964_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1049.0
CMS1_k127_2273964_1 GPR1/FUN34/yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000002239 210.0
CMS1_k127_2274269_0 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 320.0
CMS1_k127_2274269_1 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000008441 235.0
CMS1_k127_2274269_2 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000002545 177.0
CMS1_k127_2274785_0 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 358.0
CMS1_k127_2274785_1 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000000000000000001862 200.0
CMS1_k127_2274785_2 - - - - 0.00000000000000000000000000000000000002808 155.0
CMS1_k127_227926_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 336.0
CMS1_k127_227926_1 two component, sigma54 specific, transcriptional regulator K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001753 254.0
CMS1_k127_227926_2 metal cluster binding - - - 0.00000001708 60.0
CMS1_k127_2284314_0 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001156 233.0
CMS1_k127_2284314_1 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000007433 194.0
CMS1_k127_2284314_2 AMP binding K06149 - - 0.0000000000000000000000000000000000004912 144.0
CMS1_k127_2284314_3 PFAM response regulator receiver K02481,K07712 - - 0.0000000000000000000000001322 108.0
CMS1_k127_2284314_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000001828 94.0
CMS1_k127_2284314_5 PFAM response regulator receiver - - - 0.000000000000000901 84.0
CMS1_k127_22858_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 4.97e-241 750.0
CMS1_k127_22858_1 PFAM Aldehyde ferredoxin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 613.0
CMS1_k127_22858_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 455.0
CMS1_k127_22858_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009132 406.0
CMS1_k127_22858_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 367.0
CMS1_k127_22858_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000513 244.0
CMS1_k127_22858_6 Universal stress protein family - - - 0.000000000000000000000000000000000008335 141.0
CMS1_k127_2288355_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 545.0
CMS1_k127_2288355_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 472.0
CMS1_k127_2288355_2 FIST_C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006498 275.0
CMS1_k127_2288355_3 Transposase domain (DUF772) K07481 - - 0.0000000000000000000000002855 108.0
CMS1_k127_2288355_4 - - - - 0.0001383 51.0
CMS1_k127_2288355_5 Tn3 transposase DDE domain - - - 0.0008483 42.0
CMS1_k127_2297346_0 PFAM CoA-binding domain protein - - - 8.646e-258 814.0
CMS1_k127_2302453_0 Uncharacterised protein family (UPF0182) K09118 - - 6.999e-243 779.0
CMS1_k127_2302453_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 383.0
CMS1_k127_231022_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 595.0
CMS1_k127_231022_1 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 417.0
CMS1_k127_231022_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001227 236.0
CMS1_k127_231022_3 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000006788 188.0
CMS1_k127_231022_5 - - - - 0.00002691 50.0
CMS1_k127_231022_6 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00008661 49.0
CMS1_k127_2310252_0 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 406.0
CMS1_k127_2310252_1 TIR domain - - - 0.00000000000000000000000000000000000000000003848 174.0
CMS1_k127_2314137_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 372.0
CMS1_k127_2314137_1 Belongs to the UPF0109 family K06960 - - 0.00000000000838 68.0
CMS1_k127_2314137_2 Tetratricopeptide repeat - - - 0.00000000001446 66.0
CMS1_k127_232783_0 Molecular chaperone. Has ATPase activity K04079 - - 4.303e-277 865.0
CMS1_k127_232783_1 FAD dependent oxidoreductase K07137 - - 1.922e-231 723.0
CMS1_k127_232783_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 390.0
CMS1_k127_232783_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 379.0
CMS1_k127_232783_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 353.0
CMS1_k127_232783_5 N-terminal 7TM region of histidine kinase - - - 0.000000000000000000000000000000000008404 158.0
CMS1_k127_232783_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000001951 122.0
CMS1_k127_232783_7 PAS domain - - - 0.000000000000000000000000000002387 140.0
CMS1_k127_232783_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000005538 124.0
CMS1_k127_232783_9 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000003336 82.0
CMS1_k127_2330860_0 imidazolonepropionase activity K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 570.0
CMS1_k127_2330860_1 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 328.0
CMS1_k127_2330860_2 Methenyltetrahydrofolate cyclohydrolase - - - 0.00000000000000000000000009353 111.0
CMS1_k127_2343665_0 Dehydrogenase E1 component K00164 - 1.2.4.2 7.461e-316 986.0
CMS1_k127_2343665_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 539.0
CMS1_k127_2343665_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 299.0
CMS1_k127_2343665_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000002701 187.0
CMS1_k127_2344958_0 PFAM ferredoxin - - - 5.501e-299 929.0
CMS1_k127_2344958_1 pyruvate phosphate dikinase - - - 1.955e-232 737.0
CMS1_k127_2344958_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 475.0
CMS1_k127_2344958_4 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 267.0
CMS1_k127_2344958_5 Chemoreceptor zinc-binding domain K03408 - - 0.00000000000000000000000000000000000000000009638 170.0
CMS1_k127_2361638_0 MMPL family K07003 - - 3.709e-268 851.0
CMS1_k127_2361638_1 His Kinase A (phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 425.0
CMS1_k127_2361638_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000112 242.0
CMS1_k127_2361638_3 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003883 245.0
CMS1_k127_2361638_4 Thioesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000000000000000001365 189.0
CMS1_k127_2361638_5 Protein of unknown function (DUF4231) K01185 - 3.2.1.17 0.0000000000000000000000000000000000000000000001313 173.0
CMS1_k127_2361638_6 DNA mediated transformation - - - 0.000000000757 68.0
CMS1_k127_2367457_0 Flotillin K07192 - - 6.811e-224 707.0
CMS1_k127_2367457_1 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000005205 236.0
CMS1_k127_2367457_2 - - - - 0.0000000000000000000000000000000000000000000000002224 182.0
CMS1_k127_2367457_3 Sigma-54 interaction domain K03974 - - 0.0000000000000002711 79.0
CMS1_k127_2367457_4 Prokaryotic cytochrome b561 K00127 - - 0.0000000000000008756 78.0
CMS1_k127_237063_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 7.354e-206 650.0
CMS1_k127_237063_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 601.0
CMS1_k127_237063_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 363.0
CMS1_k127_237063_3 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002432 249.0
CMS1_k127_2374871_0 Tripartite tricarboxylate transporter TctA family - - - 3.942e-198 629.0
CMS1_k127_2374871_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 350.0
CMS1_k127_2374871_10 protein-S-isoprenylcysteine methyltransferase - - - 0.0001193 55.0
CMS1_k127_2374871_11 Transposase - - - 0.0002641 51.0
CMS1_k127_2374871_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 341.0
CMS1_k127_2374871_3 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000009535 201.0
CMS1_k127_2374871_4 Belongs to the FPP GGPP synthase family - - - 0.000000000000000000000000000000000000000000000000000003141 203.0
CMS1_k127_2374871_5 DNA-binding transcription factor activity K03710 - - 0.0000000000000000000000000000000000000000000000000072 190.0
CMS1_k127_2374871_6 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000005433 158.0
CMS1_k127_2374871_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000003845 127.0
CMS1_k127_2374871_8 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000009903 133.0
CMS1_k127_2374871_9 Tn3 transposase DDE domain - - - 0.00005664 47.0
CMS1_k127_238541_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.674e-282 875.0
CMS1_k127_238541_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.912e-201 633.0
CMS1_k127_238541_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 511.0
CMS1_k127_238541_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006991 276.0
CMS1_k127_238541_4 PFAM flavin reductase domain protein FMN-binding - - - 0.00000000000000000000000000000000000000000000000000004796 191.0
CMS1_k127_238541_5 - - - - 0.0000000000000000000000000000000000000003454 160.0
CMS1_k127_238541_6 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000006377 122.0
CMS1_k127_238541_7 - - - - 0.000000000000000000002284 99.0
CMS1_k127_2405253_0 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 396.0
CMS1_k127_2405253_1 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 394.0
CMS1_k127_2405253_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000007043 162.0
CMS1_k127_2405907_0 Histone deacetylase - - - 0.0 1051.0
CMS1_k127_2405907_1 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.818e-240 754.0
CMS1_k127_2405907_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.913e-214 674.0
CMS1_k127_2405907_3 Protein of unknown function (DUF418) - - - 0.000000000000000000000000000000000000000002027 170.0
CMS1_k127_2405907_4 - - - - 0.0000000000000000000000000000000000000009088 150.0
CMS1_k127_2405907_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000152 106.0
CMS1_k127_2405907_6 Sporulation related domain - - - 0.000000000000000000000119 106.0
CMS1_k127_240672_0 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 2.239e-256 814.0
CMS1_k127_240672_1 Voltage gated chloride channel K03281 - - 3.792e-224 708.0
CMS1_k127_240672_10 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000001348 161.0
CMS1_k127_240672_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000003326 125.0
CMS1_k127_240672_12 - - - - 0.0000000002169 68.0
CMS1_k127_240672_2 PFAM PhoH family protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 483.0
CMS1_k127_240672_3 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 425.0
CMS1_k127_240672_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 361.0
CMS1_k127_240672_5 response to stress - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 336.0
CMS1_k127_240672_6 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000811 278.0
CMS1_k127_240672_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000004446 233.0
CMS1_k127_240672_8 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000003795 212.0
CMS1_k127_240672_9 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000006665 169.0
CMS1_k127_2431940_0 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 3.795e-308 963.0
CMS1_k127_2431940_1 Alpha amylase, catalytic domain K00690 - 2.4.1.7 2.108e-227 712.0
CMS1_k127_2431940_2 PFAM PfkB K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000003099 236.0
CMS1_k127_2431940_3 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000006841 193.0
CMS1_k127_2431940_4 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000000006605 99.0
CMS1_k127_2431940_5 Late embryogenesis abundant protein - - - 0.00000000000000001596 92.0
CMS1_k127_2431940_6 mercury ion transmembrane transporter activity - - - 0.000000000000007081 75.0
CMS1_k127_2431940_7 PFAM Heavy metal transport detoxification protein - - - 0.0000002415 57.0
CMS1_k127_244020_0 Domain of unknown function (DUF4982) - - - 0.0 2005.0
CMS1_k127_244020_1 Beta-1,3-glucanase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 429.0
CMS1_k127_244020_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 421.0
CMS1_k127_244020_3 Glycosyl hydrolase catalytic core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 397.0
CMS1_k127_244020_4 Glycoside-hydrolase family GH114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 315.0
CMS1_k127_244020_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001741 263.0
CMS1_k127_244020_6 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000005009 156.0
CMS1_k127_244020_7 6-phospho-beta-galactosidase activity - - - 0.0000000000000131 86.0
CMS1_k127_244020_8 carbohydrate transport - - - 0.0000000001744 63.0
CMS1_k127_2442057_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 540.0
CMS1_k127_2442057_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 533.0
CMS1_k127_2442057_2 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 495.0
CMS1_k127_2442057_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 312.0
CMS1_k127_2442057_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000005039 195.0
CMS1_k127_2446168_0 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 419.0
CMS1_k127_2446168_1 4Fe-4S dicluster domain K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 379.0
CMS1_k127_2446168_2 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 295.0
CMS1_k127_2446168_3 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000000000000000000009361 230.0
CMS1_k127_2446168_4 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000006512 163.0
CMS1_k127_2446168_5 Class III cytochrome C family - - - 0.0000000000000000000000000000000002365 136.0
CMS1_k127_2459891_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1311.0
CMS1_k127_2459891_1 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 557.0
CMS1_k127_2459891_2 GXGXG motif - - - 0.000000000000000000007817 92.0
CMS1_k127_2480215_0 Amino acid permease - - - 3.193e-275 870.0
CMS1_k127_2480215_1 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 492.0
CMS1_k127_2480215_2 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 432.0
CMS1_k127_2480215_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 406.0
CMS1_k127_2499760_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.13e-299 929.0
CMS1_k127_2499760_1 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001575 275.0
CMS1_k127_2499760_2 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000004517 235.0
CMS1_k127_2499760_3 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000000000002347 91.0
CMS1_k127_2533819_0 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 508.0
CMS1_k127_2533819_1 RNA 3'-terminal phosphate cyclase (RTC), insert domain K01974 - 6.5.1.4 0.0000000000000000001964 89.0
CMS1_k127_253414_0 AMP-binding enzyme K22319 - 6.1.3.1 9.682e-238 746.0
CMS1_k127_253414_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 493.0
CMS1_k127_253414_2 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 436.0
CMS1_k127_253414_3 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 379.0
CMS1_k127_253414_4 Uncharacterised ACR (DUF711) K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 306.0
CMS1_k127_253414_5 PFAM amino acid-binding ACT domain protein K03567 - - 0.00000000000000000000000000000000000000000000000000000003167 201.0
CMS1_k127_253414_6 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.00000000000000000000000000000000000000000000000008374 179.0
CMS1_k127_2539860_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1332.0
CMS1_k127_2539860_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 393.0
CMS1_k127_2539860_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 319.0
CMS1_k127_2539860_3 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.00006585 52.0
CMS1_k127_254239_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 6.7e-267 832.0
CMS1_k127_254239_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 2.615e-240 747.0
CMS1_k127_254239_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.394e-231 724.0
CMS1_k127_254239_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 1.048e-199 638.0
CMS1_k127_254239_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 380.0
CMS1_k127_254239_5 ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003221 259.0
CMS1_k127_254239_6 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000003127 183.0
CMS1_k127_2547695_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1576.0
CMS1_k127_2547695_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 535.0
CMS1_k127_2547695_11 Putative regulatory protein - - - 0.0000002052 55.0
CMS1_k127_2547695_2 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 495.0
CMS1_k127_2547695_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 432.0
CMS1_k127_2547695_4 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 442.0
CMS1_k127_2547695_5 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 356.0
CMS1_k127_2547695_6 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 296.0
CMS1_k127_2547695_7 FCD K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003359 274.0
CMS1_k127_2547695_8 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000005148 160.0
CMS1_k127_2547695_9 - - - - 0.00000000000000004343 87.0
CMS1_k127_254892_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 508.0
CMS1_k127_254892_1 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 418.0
CMS1_k127_2554176_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 486.0
CMS1_k127_2554176_1 acyl-CoA dehydrogenase K09456 - - 0.000000000000000000000000000000000000000000001018 169.0
CMS1_k127_255740_0 Asparagine synthase K01953 - 6.3.5.4 2.86e-258 812.0
CMS1_k127_255740_1 Alpha/beta hydrolase of unknown function (DUF915) - - - 1.904e-214 685.0
CMS1_k127_255740_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 429.0
CMS1_k127_255740_3 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000008399 164.0
CMS1_k127_255740_4 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.00000000000000001815 91.0
CMS1_k127_256126_0 Protein of unknown function (DUF3373) - - - 3.59e-213 677.0
CMS1_k127_256126_1 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006516 416.0
CMS1_k127_256126_2 PFAM Cytochrome c, bacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 340.0
CMS1_k127_256126_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000007011 123.0
CMS1_k127_256126_4 - - - - 0.0000002071 58.0
CMS1_k127_256126_5 - - - - 0.000003686 51.0
CMS1_k127_2580035_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 481.0
CMS1_k127_2580035_1 Putative molybdenum carrier - - - 0.000000000000000000000000000000000000000000002007 169.0
CMS1_k127_2580035_2 Putative small multi-drug export protein - - - 0.00000000000000000000004002 108.0
CMS1_k127_2580035_3 PFAM Type II secretion system protein E K02669 - - 0.00000000009707 66.0
CMS1_k127_2580035_4 Zinc ribbon domain - - - 0.00001516 49.0
CMS1_k127_259728_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 1.388e-228 729.0
CMS1_k127_259728_1 Sigma-54 interaction domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000002083 192.0
CMS1_k127_259728_2 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000006684 145.0
CMS1_k127_259728_3 Short C-terminal domain K08982 - - 0.00000000000000009095 84.0
CMS1_k127_259728_4 Protein of unknown function (DUF3309) - - - 0.00000000843 61.0
CMS1_k127_260728_0 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 550.0
CMS1_k127_260728_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 497.0
CMS1_k127_260728_2 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000042 192.0
CMS1_k127_260728_3 - - - - 0.00000000001016 68.0
CMS1_k127_2614062_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 3.464e-280 871.0
CMS1_k127_261902_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1128.0
CMS1_k127_261902_1 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 324.0
CMS1_k127_261902_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000006384 121.0
CMS1_k127_261902_3 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000002236 100.0
CMS1_k127_261902_4 Methylenetetrahydrofolate reductase - - - 0.0000000005511 60.0
CMS1_k127_263588_0 Transglycosylase K05366,K21464 - 2.4.1.129,3.4.16.4 1.576e-237 750.0
CMS1_k127_263588_1 CRS1_YhbY K07574 - - 0.000000000000000000000000000005313 122.0
CMS1_k127_263588_2 - - - - 0.00000000000000000000002184 104.0
CMS1_k127_263588_3 - - - - 0.000000000000000003649 84.0
CMS1_k127_263588_4 - - - - 0.000004853 51.0
CMS1_k127_263768_0 WYL domain K13573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 332.0
CMS1_k127_263768_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006879 271.0
CMS1_k127_263768_2 TIGRFAM CRISPR-associated helicase Cas3 K07012 - - 0.00000000000000000002656 93.0
CMS1_k127_265654_0 Domain of unknown function (DUF1848) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 312.0
CMS1_k127_265654_1 - - - - 0.000000000000000000000000000000339 125.0
CMS1_k127_265654_2 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0000000000000000000000000721 108.0
CMS1_k127_2672132_0 ATPase family associated with various cellular activities (AAA) - - - 0.0 1489.0
CMS1_k127_2672132_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 436.0
CMS1_k127_269841_0 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 515.0
CMS1_k127_269841_1 ABC transporter K15738 - - 0.0000000000000000000000007279 106.0
CMS1_k127_2705626_0 Histidine kinase K07641,K14980 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 503.0
CMS1_k127_2705626_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 420.0
CMS1_k127_2705626_2 response regulator K02483,K07663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 308.0
CMS1_k127_2705626_3 Sugar transferase K19428 - - 0.00000000000000000000000000000006961 138.0
CMS1_k127_2705626_4 - - - - 0.00000000000000000000002494 102.0
CMS1_k127_2707680_0 Conserved region in glutamate synthase - - - 2.307e-301 931.0
CMS1_k127_2707680_1 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 536.0
CMS1_k127_2707680_10 PFAM Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000001792 158.0
CMS1_k127_2707680_11 - - - - 0.00000000000000000000000003579 109.0
CMS1_k127_2707680_12 dihydromethanopterin reductase activity K00176,K06411,K12527 - 1.2.7.3,1.97.1.9 0.000000000000000000008504 94.0
CMS1_k127_2707680_13 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.0000000000004708 69.0
CMS1_k127_2707680_2 glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 496.0
CMS1_k127_2707680_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 479.0
CMS1_k127_2707680_4 Protein of unknown function (DUF401) K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 403.0
CMS1_k127_2707680_5 ANTAR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 341.0
CMS1_k127_2707680_6 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000153 250.0
CMS1_k127_2707680_7 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002894 239.0
CMS1_k127_2707680_8 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000009464 220.0
CMS1_k127_2707680_9 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000002383 220.0
CMS1_k127_271353_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 398.0
CMS1_k127_271353_1 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000001624 230.0
CMS1_k127_271353_2 - - - - 0.0000000000000000000000006589 113.0
CMS1_k127_2718249_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1313.0
CMS1_k127_2718249_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1145.0
CMS1_k127_2718249_10 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000004597 145.0
CMS1_k127_2718249_2 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 1.78e-247 779.0
CMS1_k127_2718249_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 584.0
CMS1_k127_2718249_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 542.0
CMS1_k127_2718249_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 456.0
CMS1_k127_2718249_6 DNA polymerase III, delta' K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 323.0
CMS1_k127_2718249_7 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 301.0
CMS1_k127_2718249_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000003656 192.0
CMS1_k127_2718249_9 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000021 157.0
CMS1_k127_2724578_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 4.07e-263 818.0
CMS1_k127_2724796_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 331.0
CMS1_k127_2724796_1 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 291.0
CMS1_k127_2724796_2 Creatinine amidohydrolase - - - 0.0000001336 57.0
CMS1_k127_2724796_3 Creatininase K01470 - 3.5.2.10 0.0000006466 55.0
CMS1_k127_273038_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 9.532e-275 861.0
CMS1_k127_273038_1 ATP synthase alpha beta family, nucleotide-binding domain K02412,K03224 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 601.0
CMS1_k127_273038_10 PFAM SRP54-type protein, GTPase domain K02404 - - 0.00000000000000000000000000000000000000000000000000001441 206.0
CMS1_k127_273038_11 Flagellar motor switch protein FliN K02417 - - 0.00000000000000000000000000000000004222 138.0
CMS1_k127_273038_12 Role in flagellar biosynthesis K02420,K03227 - - 0.00000000000000000000000000001974 120.0
CMS1_k127_273038_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.00000000000000000004369 92.0
CMS1_k127_273038_14 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000002255 92.0
CMS1_k127_273038_15 Flagellar FliJ protein K02413 - - 0.000000000000002135 81.0
CMS1_k127_273038_16 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000002446 80.0
CMS1_k127_273038_17 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K10943 - - 0.00007463 45.0
CMS1_k127_273038_18 Flagellar biosynthesis protein, FliO K02418 - - 0.0004003 48.0
CMS1_k127_273038_2 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 466.0
CMS1_k127_273038_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 446.0
CMS1_k127_273038_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 370.0
CMS1_k127_273038_5 flagellar motor switch protein FliM K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009423 332.0
CMS1_k127_273038_6 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 305.0
CMS1_k127_273038_7 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 306.0
CMS1_k127_273038_8 flagellar motor switch protein FliG K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 290.0
CMS1_k127_273038_9 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000001106 204.0
CMS1_k127_2734974_0 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 5.422e-309 958.0
CMS1_k127_2734974_1 NmrA-like family K19267 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 482.0
CMS1_k127_2734974_2 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 486.0
CMS1_k127_2734974_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 360.0
CMS1_k127_2734974_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000001625 131.0
CMS1_k127_2734974_5 - - - - 0.0001065 51.0
CMS1_k127_2743301_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.647e-283 883.0
CMS1_k127_2743301_1 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 585.0
CMS1_k127_2743301_2 PFAM type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009989 584.0
CMS1_k127_2743301_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 358.0
CMS1_k127_2743301_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 335.0
CMS1_k127_2743301_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 334.0
CMS1_k127_2743301_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003427 267.0
CMS1_k127_2743301_7 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003294 235.0
CMS1_k127_2743301_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000277 173.0
CMS1_k127_2743301_9 PFAM Type II IV secretion system protein K02669 - - 0.0000000000000000009219 85.0
CMS1_k127_2746256_0 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 520.0
CMS1_k127_2746256_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000131 138.0
CMS1_k127_2746256_2 ACT domain protein - - - 0.00000000000000000000000000000000002148 137.0
CMS1_k127_2750690_0 Histidine kinase K01768 - 4.6.1.1 2.015e-235 745.0
CMS1_k127_2750690_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 2.196e-217 685.0
CMS1_k127_2750690_2 type IV pilus assembly PilZ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 582.0
CMS1_k127_2750690_3 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 500.0
CMS1_k127_2750690_4 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 355.0
CMS1_k127_2750690_5 Methyltransferase, YaeB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001998 240.0
CMS1_k127_2750690_6 COGs COG4087 Soluble P-type ATPase - - - 0.000000000000000000000000000000000000000000000001607 177.0
CMS1_k127_2750690_7 Protein of unknown function (DUF533) - - - 0.000000000000000000000001823 112.0
CMS1_k127_2752360_0 ABC-type uncharacterized transport system - - - 1.382e-232 740.0
CMS1_k127_2752360_1 TonB-dependent receptor K02014 - - 1.06e-201 650.0
CMS1_k127_2752360_2 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 381.0
CMS1_k127_2752360_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 307.0
CMS1_k127_2752360_4 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000000002445 150.0
CMS1_k127_2752360_5 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000001457 111.0
CMS1_k127_2752360_6 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000000003072 87.0
CMS1_k127_2752360_7 Sporulation related domain K03112 - - 0.0000000000009013 79.0
CMS1_k127_2756073_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.712e-236 743.0
CMS1_k127_2756073_1 PFAM cobalamin (vitamin B12) biosynthesis CbiG protein K02189 - 3.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 335.0
CMS1_k127_2756073_2 TIGRFAM precorrin-3B C17-methyltransferase K05934,K13541,K21479 - 2.1.1.131,2.1.1.272,3.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 307.0
CMS1_k127_2756073_3 PFAM aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006862 276.0
CMS1_k127_2756073_4 Belongs to the precorrin methyltransferase family K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000001436 136.0
CMS1_k127_2756107_0 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 442.0
CMS1_k127_2756107_1 Domain of unknown function (DUF1850) - - - 0.000000000000000000002207 96.0
CMS1_k127_2757160_0 TIGRFAM phosphonopyruvate decarboxylase-related protein K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 494.0
CMS1_k127_2757160_1 Putative Na+/H+ antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 338.0
CMS1_k127_2757160_2 cytidyltransferase-related domain K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000008371 252.0
CMS1_k127_2757160_3 PFAM PHP domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000007616 215.0
CMS1_k127_2757160_4 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000028 219.0
CMS1_k127_2757160_5 - - - - 0.000000000000000000000000000000000000000000000000000001727 200.0
CMS1_k127_2757160_6 - - - - 0.00000000000000177 85.0
CMS1_k127_2762086_0 Belongs to the peptidase M16 family K07263 - - 1.025e-284 905.0
CMS1_k127_2762086_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 2.336e-261 824.0
CMS1_k127_2762086_2 UvrD REP helicase K03657 - 3.6.4.12 2.428e-225 717.0
CMS1_k127_2762086_3 PFAM Polysulphide reductase, NrfD K00185 - - 1.274e-211 664.0
CMS1_k127_2762086_4 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 456.0
CMS1_k127_2762086_5 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 451.0
CMS1_k127_2762086_6 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 390.0
CMS1_k127_2762086_7 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 329.0
CMS1_k127_2762086_8 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000002053 152.0
CMS1_k127_2762086_9 - - - - 0.00000000000000007001 81.0
CMS1_k127_2763459_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2151.0
CMS1_k127_2763459_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 378.0
CMS1_k127_2763459_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
CMS1_k127_2763459_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001112 247.0
CMS1_k127_2763459_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000003184 215.0
CMS1_k127_2763459_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000001617 188.0
CMS1_k127_2763459_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000005531 166.0
CMS1_k127_2763459_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000002931 90.0
CMS1_k127_2763459_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000001207 86.0
CMS1_k127_2763459_9 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000001698 81.0
CMS1_k127_2771292_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 463.0
CMS1_k127_2771292_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 322.0
CMS1_k127_2771292_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000179 268.0
CMS1_k127_2771292_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001519 217.0
CMS1_k127_2771292_4 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000009235 192.0
CMS1_k127_2771292_5 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000004181 164.0
CMS1_k127_2771292_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000007592 153.0
CMS1_k127_2771292_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000008583 135.0
CMS1_k127_2771292_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000001698 81.0
CMS1_k127_2773318_0 Alkaline phosphatase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 370.0
CMS1_k127_2773318_1 Dicarboxylate transport - - - 0.000000000000000000000000000000000000000000000000000000000002462 234.0
CMS1_k127_2775691_0 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000003006 208.0
CMS1_k127_2788110_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.02e-273 855.0
CMS1_k127_2788110_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 562.0
CMS1_k127_2788110_2 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002434 272.0
CMS1_k127_2788110_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000227 192.0
CMS1_k127_2788110_5 Mo-molybdopterin cofactor metabolic process K03636,K21147 GO:0000096,GO:0000097,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.80,2.8.1.11 0.0000000002365 64.0
CMS1_k127_2788110_6 Amidohydrolase K07045 - - 0.0000002207 53.0
CMS1_k127_2788134_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 369.0
CMS1_k127_2788134_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 325.0
CMS1_k127_2788134_2 Zinc-binding dehydrogenase K19745 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 310.0
CMS1_k127_2788172_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 1.411e-275 856.0
CMS1_k127_2788172_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 367.0
CMS1_k127_2788172_2 RNA pseudouridylate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000005139 223.0
CMS1_k127_2788172_3 Memo-like protein K06990 - - 0.0000000002613 61.0
CMS1_k127_2788409_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 560.0
CMS1_k127_2788409_1 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 478.0
CMS1_k127_2788409_2 Rubrerythrin - - - 0.00000000000000000000000000000000000000003873 156.0
CMS1_k127_2788409_3 - - - - 0.0000000000000002287 80.0
CMS1_k127_2788409_4 Carboxymuconolactone decarboxylase family - - - 0.00002199 52.0
CMS1_k127_2789934_0 Transposase - - - 0.0 1317.0
CMS1_k127_2789934_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 586.0
CMS1_k127_2789934_11 LysR substrate binding domain - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0005081 44.0
CMS1_k127_2789934_2 Efflux transporter, RND family, MFP subunit K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 460.0
CMS1_k127_2789934_3 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000629 330.0
CMS1_k127_2789934_4 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 325.0
CMS1_k127_2789934_5 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008723 279.0
CMS1_k127_2789934_6 RES - - - 0.0000000000000000000000000000000000000002771 154.0
CMS1_k127_2789934_7 crp fnr family K01420 - - 0.000000000000000000000000000000000000003264 154.0
CMS1_k127_2789934_8 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000002206 113.0
CMS1_k127_2789934_9 Domain of unknown function (DUF1956) - - - 0.000000005066 61.0
CMS1_k127_2791028_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 290.0
CMS1_k127_2791028_1 methyltransferase - - - 0.00000000000000000000002093 102.0
CMS1_k127_2791028_2 phosphatase homologous to the C-terminal domain of histone macroH2A1 K01515 - 3.6.1.13 0.00000000000000000003577 103.0
CMS1_k127_2791028_3 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.00000000005041 63.0
CMS1_k127_2791028_4 methyltransferase - - - 0.0000398 49.0
CMS1_k127_2799948_0 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 0.0 1004.0
CMS1_k127_2799948_1 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 338.0
CMS1_k127_2799948_2 DegV family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 289.0
CMS1_k127_2799948_4 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000008206 70.0
CMS1_k127_2799948_5 PrcB C-terminal - - - 0.0000003634 59.0
CMS1_k127_2800395_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 569.0
CMS1_k127_2800395_1 TIGRFAM electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 441.0
CMS1_k127_2800395_2 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 417.0
CMS1_k127_2800395_3 Belongs to the NqrDE RnfAE family K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 374.0
CMS1_k127_2800395_4 Belongs to the NqrDE RnfAE family K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 306.0
CMS1_k127_2800395_5 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000273 214.0
CMS1_k127_2800395_6 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000002337 189.0
CMS1_k127_2800395_7 Transposase - - - 0.00000001433 58.0
CMS1_k127_2800395_8 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000002183 55.0
CMS1_k127_2800395_9 Belongs to the SOS response-associated peptidase family - - - 0.0004585 44.0
CMS1_k127_2803526_0 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001093 224.0
CMS1_k127_2803526_1 Short repeat of unknown function (DUF308) - - - 0.0000000000000000000000000000000000000000005605 164.0
CMS1_k127_2803526_2 PFAM phospholipase D Transphosphatidylase K06132 - - 0.000000000000000000000000001352 117.0
CMS1_k127_2807509_0 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 581.0
CMS1_k127_2807509_1 - - - - 0.00000000000000000000000002411 116.0
CMS1_k127_2807509_2 - - - - 0.0000000000000000000000002566 109.0
CMS1_k127_2807509_3 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0000000000001018 74.0
CMS1_k127_280987_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1008.0
CMS1_k127_280987_1 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 292.0
CMS1_k127_280987_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000002096 220.0
CMS1_k127_280987_3 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000001443 161.0
CMS1_k127_2817886_0 General secretory system II protein E domain protein - - - 0.0 1080.0
CMS1_k127_2817886_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 3.043e-232 724.0
CMS1_k127_2817886_10 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000004163 217.0
CMS1_k127_2817886_11 ACT domain - - - 0.0000000000000000000000000000000000000000000000000000000002399 206.0
CMS1_k127_2817886_12 - K01507 - 3.6.1.1 0.0000000000000000000000000000001972 126.0
CMS1_k127_2817886_13 - - - - 0.0000000000000000000000000000003028 128.0
CMS1_k127_2817886_14 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000005844 115.0
CMS1_k127_2817886_15 Belongs to the UPF0307 family K09889 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000008884 109.0
CMS1_k127_2817886_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.117e-216 679.0
CMS1_k127_2817886_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 556.0
CMS1_k127_2817886_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 440.0
CMS1_k127_2817886_5 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 370.0
CMS1_k127_2817886_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 368.0
CMS1_k127_2817886_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 286.0
CMS1_k127_2817886_8 TIGRFAM maf protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001346 269.0
CMS1_k127_2817886_9 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000002837 254.0
CMS1_k127_2817991_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 - 6.2.1.1,6.2.1.17 2.561e-235 731.0
CMS1_k127_2817991_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 425.0
CMS1_k127_2817991_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001033 271.0
CMS1_k127_2817991_3 ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000002397 182.0
CMS1_k127_2820166_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00184 - - 0.0 1089.0
CMS1_k127_2820166_1 Polysulphide reductase, NrfD K00185 - - 1.682e-231 722.0
CMS1_k127_2820166_10 Enoyl-(Acyl carrier protein) reductase K16216 - 1.1.1.320 0.0000000000000000000000000000000000000000000003518 178.0
CMS1_k127_2820166_11 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000166 189.0
CMS1_k127_2820166_12 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000002065 167.0
CMS1_k127_2820166_13 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000001224 68.0
CMS1_k127_2820166_2 acyl-CoA thioesterase II K10805 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 430.0
CMS1_k127_2820166_3 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 430.0
CMS1_k127_2820166_4 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 422.0
CMS1_k127_2820166_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 436.0
CMS1_k127_2820166_6 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 284.0
CMS1_k127_2820166_7 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009825 260.0
CMS1_k127_2820166_8 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000118 267.0
CMS1_k127_2820166_9 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000002314 243.0
CMS1_k127_2823627_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008879 287.0
CMS1_k127_2823627_1 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005677 262.0
CMS1_k127_2823627_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001477 249.0
CMS1_k127_2823627_3 MgtC family K07507 - - 0.000000000000000000000000000000000000000000000006802 177.0
CMS1_k127_2823627_4 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000127 166.0
CMS1_k127_2823627_5 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000005448 120.0
CMS1_k127_2823627_6 - - - - 0.000000000002088 70.0
CMS1_k127_2824886_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 1.903e-204 651.0
CMS1_k127_2824886_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 359.0
CMS1_k127_2824886_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000001098 252.0
CMS1_k127_2824886_3 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000004069 199.0
CMS1_k127_2824886_4 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000008812 119.0
CMS1_k127_2824886_5 - - - - 0.00000000000000002928 86.0
CMS1_k127_2826967_0 Methionine synthase B12-binding module cap domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003428 236.0
CMS1_k127_2826967_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000003639 224.0
CMS1_k127_2826967_2 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000002013 133.0
CMS1_k127_2837870_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 528.0
CMS1_k127_2837870_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 304.0
CMS1_k127_2837870_2 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001701 247.0
CMS1_k127_2837870_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000001076 175.0
CMS1_k127_2839597_0 palmitoyl-(protein) hydrolase activity K06999,K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 468.0
CMS1_k127_2839597_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001823 274.0
CMS1_k127_2839597_2 DnaJ molecular chaperone homology domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000008711 224.0
CMS1_k127_2839597_3 cytochrome - - - 0.00000000000000000000000000000000000000000000000000007088 194.0
CMS1_k127_2839597_5 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.000000000000000000000000000000000001525 143.0
CMS1_k127_2839597_6 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000000000000000000000000001391 125.0
CMS1_k127_2839769_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 471.0
CMS1_k127_2839769_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 422.0
CMS1_k127_2839769_2 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 329.0
CMS1_k127_2839769_3 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 289.0
CMS1_k127_2839769_4 - - - - 0.000000000000000000000000000000000000000000000000000000001489 209.0
CMS1_k127_2839769_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000003394 165.0
CMS1_k127_2839824_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 514.0
CMS1_k127_2839824_1 Belongs to the RimK family K05844 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000003565 172.0
CMS1_k127_2842424_0 UvrD REP helicase K03657 - 3.6.4.12 7.05e-248 779.0
CMS1_k127_2842424_1 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 1.49e-213 677.0
CMS1_k127_2842424_10 Peptidase dimerisation domain K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 430.0
CMS1_k127_2842424_11 Butirosin biosynthesis protein H, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 414.0
CMS1_k127_2842424_12 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 322.0
CMS1_k127_2842424_13 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 298.0
CMS1_k127_2842424_14 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001762 239.0
CMS1_k127_2842424_15 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000005126 191.0
CMS1_k127_2842424_16 regulatory protein, arsR K03892 - - 0.00000000000000000000000000000000000000000000000000006872 195.0
CMS1_k127_2842424_17 PHB/PHA accumulation regulator DNA-binding domain - - - 0.0000000000000000000000000000000000000000000009996 171.0
CMS1_k127_2842424_18 - - - - 0.000000000000000000000000000000001324 134.0
CMS1_k127_2842424_19 Thioredoxin domain - - - 0.00000000000000000000000000000007232 125.0
CMS1_k127_2842424_2 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 587.0
CMS1_k127_2842424_20 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000001088 108.0
CMS1_k127_2842424_21 - - - - 0.0000000000000000000002508 98.0
CMS1_k127_2842424_22 - - - - 0.0000000000000000000008291 102.0
CMS1_k127_2842424_23 - - - - 0.0000000000003052 73.0
CMS1_k127_2842424_3 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 543.0
CMS1_k127_2842424_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 524.0
CMS1_k127_2842424_5 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 467.0
CMS1_k127_2842424_6 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 461.0
CMS1_k127_2842424_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 475.0
CMS1_k127_2842424_8 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 436.0
CMS1_k127_2842424_9 TOBE domain K02019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 432.0
CMS1_k127_2843832_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 315.0
CMS1_k127_2843832_1 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000001378 173.0
CMS1_k127_2843832_2 Sodium Bile acid symporter family K03325,K03741 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656 1.20.4.1 0.0000000000000000000000000000000000008293 153.0
CMS1_k127_2843832_3 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000283 138.0
CMS1_k127_2843832_5 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000002475 121.0
CMS1_k127_2843832_6 Transposase K07491 - - 0.0000000002227 61.0
CMS1_k127_2843832_7 Transposase K03652 - 3.2.2.21 0.0000000009392 61.0
CMS1_k127_2843832_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000008284 57.0
CMS1_k127_2853801_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 575.0
CMS1_k127_2856622_0 Arsenical pump membrane protein - - - 3.843e-201 634.0
CMS1_k127_2856622_1 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 592.0
CMS1_k127_2856622_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 532.0
CMS1_k127_2856622_3 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 372.0
CMS1_k127_2856622_4 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 314.0
CMS1_k127_2856622_6 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000003251 234.0
CMS1_k127_2856622_7 CoA-substrate-specific enzyme activase - - - 0.000000000000000007554 85.0
CMS1_k127_2856622_8 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000001276 64.0
CMS1_k127_2856622_9 PFAM TPR repeat-containing protein - - - 0.0000001336 62.0
CMS1_k127_2861856_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 438.0
CMS1_k127_2861856_1 transferase activity, transferring hexosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 402.0
CMS1_k127_2861856_2 lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000006826 166.0
CMS1_k127_2862147_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 581.0
CMS1_k127_2862147_1 MGS-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 319.0
CMS1_k127_2862147_2 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003002 259.0
CMS1_k127_2862147_3 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000003644 100.0
CMS1_k127_2862147_4 Cellulose biosynthesis protein BcsQ - - - 0.000000000000000002952 97.0
CMS1_k127_2866328_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1521.0
CMS1_k127_2866328_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 578.0
CMS1_k127_2866328_10 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000004531 149.0
CMS1_k127_2866328_11 binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000008332 119.0
CMS1_k127_2866328_12 Putative transposon-encoded protein (DUF2080) - - - 0.000000000000000007103 85.0
CMS1_k127_2866328_2 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 459.0
CMS1_k127_2866328_3 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 407.0
CMS1_k127_2866328_4 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 385.0
CMS1_k127_2866328_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 330.0
CMS1_k127_2866328_6 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 324.0
CMS1_k127_2866328_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000114 196.0
CMS1_k127_2866328_8 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000002852 171.0
CMS1_k127_2866328_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000003653 150.0
CMS1_k127_2873427_0 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 481.0
CMS1_k127_2873427_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 486.0
CMS1_k127_2873427_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 361.0
CMS1_k127_2873427_3 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 321.0
CMS1_k127_2873427_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001314 252.0
CMS1_k127_2873427_5 PFAM extracellular solute-binding protein family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000001995 207.0
CMS1_k127_2873427_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000002641 173.0
CMS1_k127_2873427_7 - - - - 0.00000000000000000000005705 103.0
CMS1_k127_2873427_8 - - - - 0.0000000000000001597 93.0
CMS1_k127_2874642_0 Phosphofructokinase K00895,K21071 - 2.7.1.11,2.7.1.90 2.135e-306 952.0
CMS1_k127_2874642_1 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 526.0
CMS1_k127_2874642_2 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 512.0
CMS1_k127_2874642_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002817 287.0
CMS1_k127_2874909_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1178.0
CMS1_k127_2874909_1 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 9.295e-252 786.0
CMS1_k127_2874909_10 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000003099 110.0
CMS1_k127_2874909_11 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000293 103.0
CMS1_k127_2874909_12 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000303 96.0
CMS1_k127_2874909_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 342.0
CMS1_k127_2874909_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 325.0
CMS1_k127_2874909_4 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000664 259.0
CMS1_k127_2874909_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002961 256.0
CMS1_k127_2874909_6 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000056 224.0
CMS1_k127_2874909_7 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000003892 162.0
CMS1_k127_2874909_8 PFAM GAF domain - - - 0.000000000000000000000000000000000000000001139 163.0
CMS1_k127_2874909_9 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000007501 122.0
CMS1_k127_2887346_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 5.609e-305 950.0
CMS1_k127_2887346_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 511.0
CMS1_k127_2887346_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000005789 82.0
CMS1_k127_2887346_2 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 364.0
CMS1_k127_2887346_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000275 238.0
CMS1_k127_2887346_4 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000002885 225.0
CMS1_k127_2887346_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000003225 207.0
CMS1_k127_2887346_6 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000000000000397 207.0
CMS1_k127_2887346_7 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000002169 177.0
CMS1_k127_2887346_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000009748 142.0
CMS1_k127_2887346_9 ATP synthase B/B' CF(0) K02109 - - 0.00000000000000000000009373 106.0
CMS1_k127_2893207_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 557.0
CMS1_k127_2893207_1 histidine kinase internal region K02478,K07704 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 500.0
CMS1_k127_2893207_10 Universal stress protein - - - 0.00000000000000000000000000000000663 133.0
CMS1_k127_2893207_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000004776 71.0
CMS1_k127_2893207_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009072 516.0
CMS1_k127_2893207_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 447.0
CMS1_k127_2893207_4 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 445.0
CMS1_k127_2893207_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 360.0
CMS1_k127_2893207_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 312.0
CMS1_k127_2893207_7 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000008122 236.0
CMS1_k127_2893207_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000003216 184.0
CMS1_k127_2893207_9 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000005981 174.0
CMS1_k127_2893226_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 599.0
CMS1_k127_2893226_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 589.0
CMS1_k127_2893226_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 510.0
CMS1_k127_2893226_3 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 290.0
CMS1_k127_2893226_4 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000004908 170.0
CMS1_k127_2893226_5 - - - - 0.0000000000000000000000000000000000000001284 152.0
CMS1_k127_2893226_6 - - - - 0.00000000000004871 78.0
CMS1_k127_2897857_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 595.0
CMS1_k127_2897857_1 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 484.0
CMS1_k127_2897857_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 344.0
CMS1_k127_2897857_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
CMS1_k127_2902550_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005892 492.0
CMS1_k127_2902550_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000001592 158.0
CMS1_k127_2902550_2 PFAM Rhomboid family - - - 0.0005214 50.0
CMS1_k127_2908508_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1073.0
CMS1_k127_2908508_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 7.095e-250 778.0
CMS1_k127_2908508_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 415.0
CMS1_k127_2908508_3 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 413.0
CMS1_k127_2908508_4 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000002271 229.0
CMS1_k127_2908508_5 C-C_Bond_Lyase of the TIM-Barrel fold K01644,K18292 - 4.1.3.25,4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000376 219.0
CMS1_k127_2908508_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000006651 96.0
CMS1_k127_2909132_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1616.0
CMS1_k127_2909132_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1206.0
CMS1_k127_2909132_10 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 353.0
CMS1_k127_2909132_11 PFAM binding-protein-dependent transport systems inner membrane component K13891 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 327.0
CMS1_k127_2909132_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 330.0
CMS1_k127_2909132_13 COG0444 ABC-type dipeptide oligopeptide nickel transport system, ATPase component K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007853 287.0
CMS1_k127_2909132_14 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008684 277.0
CMS1_k127_2909132_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002024 235.0
CMS1_k127_2909132_16 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000002596 251.0
CMS1_k127_2909132_17 Leucine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000002292 235.0
CMS1_k127_2909132_18 - - - - 0.00000000000000000000000000000000000000000000000000000000006996 210.0
CMS1_k127_2909132_19 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000009461 192.0
CMS1_k127_2909132_2 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1050.0
CMS1_k127_2909132_20 PFAM Hemerythrin HHE cation binding domain protein - - - 0.0000000000000000000000000000000000000000000000003259 183.0
CMS1_k127_2909132_21 transcriptional regulator - - - 0.0000000000000000000000000000001647 132.0
CMS1_k127_2909132_22 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000003164 116.0
CMS1_k127_2909132_23 Gaf domain K02003,K02484,K14986 - 2.7.13.3 0.00000000000000000000782 109.0
CMS1_k127_2909132_24 - - - - 0.000000000000000000185 95.0
CMS1_k127_2909132_25 Belongs to the peptidase S8 family - - - 0.000000167 64.0
CMS1_k127_2909132_26 Acyl-CoA dehydrogenase N terminal - - - 0.00007796 47.0
CMS1_k127_2909132_3 Parallel beta-helix repeats - - - 5.186e-304 993.0
CMS1_k127_2909132_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 615.0
CMS1_k127_2909132_5 Bacterial extracellular solute-binding proteins, family 5 Middle K13889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 602.0
CMS1_k127_2909132_6 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 495.0
CMS1_k127_2909132_7 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 467.0
CMS1_k127_2909132_8 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 426.0
CMS1_k127_2909132_9 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 404.0
CMS1_k127_2920364_0 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000228 270.0
CMS1_k127_2920364_1 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000003816 196.0
CMS1_k127_2920364_2 - - - - 0.00000000000000000000000000000000000000000006347 171.0
CMS1_k127_2920364_3 ATPase activity K02013,K02028,K05776 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.21,3.6.3.34 0.000000000000000000000000000000002063 139.0
CMS1_k127_2927750_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1098.0
CMS1_k127_2927750_1 BadF BadG BcrA BcrD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 373.0
CMS1_k127_2927750_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 311.0
CMS1_k127_2927750_3 Integral membrane sensor signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001767 271.0
CMS1_k127_2927750_4 ATP-independent chaperone mediated protein folding - - - 0.0000001691 59.0
CMS1_k127_2930954_0 PFAM Acetyl-CoA hydrolase transferase - - - 5.023e-282 882.0
CMS1_k127_2930954_1 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 595.0
CMS1_k127_2930954_2 PFAM inner-membrane translocator K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 526.0
CMS1_k127_2930954_3 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 479.0
CMS1_k127_2930954_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 434.0
CMS1_k127_2930954_5 Archaebacterial flagellin - - - 0.0000000000000000000000000000000000000000000000506 179.0
CMS1_k127_2930954_6 ACT domain protein - - - 0.00000000000000000000000000000003532 128.0
CMS1_k127_2930954_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000004157 86.0
CMS1_k127_2932358_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 5.37e-211 665.0
CMS1_k127_2932358_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 290.0
CMS1_k127_2932358_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000005867 158.0
CMS1_k127_2932358_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000006889 81.0
CMS1_k127_2933891_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 486.0
CMS1_k127_2933891_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 450.0
CMS1_k127_2937868_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.133e-266 828.0
CMS1_k127_2937868_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 467.0
CMS1_k127_2937868_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000005251 100.0
CMS1_k127_294016_0 Membrane bound O-acyl transferase family K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008626 415.0
CMS1_k127_294016_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002613 259.0
CMS1_k127_294016_2 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000004445 201.0
CMS1_k127_294016_3 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000003378 83.0
CMS1_k127_2942624_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 364.0
CMS1_k127_2942624_1 ATPase associated with various cellular activities, AAA_5 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 323.0
CMS1_k127_2942624_2 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009917 246.0
CMS1_k127_2942624_3 protein (some members contain a von Willebrand factor type A (vWA) domain K02034,K13891 - - 0.0000000000000000000000000000000000000000003674 173.0
CMS1_k127_2942624_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000001509 119.0
CMS1_k127_2942624_5 - - - - 0.000000000000000000000000006069 121.0
CMS1_k127_2942624_6 negative regulation of transcription, DNA-templated - - - 0.00000000000403 73.0
CMS1_k127_2942624_7 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000003844 55.0
CMS1_k127_2947851_0 General secretory system II protein E domain protein K02652 - - 6.54e-271 842.0
CMS1_k127_2947851_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 478.0
CMS1_k127_2947851_2 PFAM type II secretion system K02653,K12278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 471.0
CMS1_k127_2947851_3 Pfam:N_methyl_2 - - - 0.000000000000009874 79.0
CMS1_k127_2947851_4 AAA domain K02450 - - 0.0000001736 60.0
CMS1_k127_2947851_5 Tetratricopeptide repeat - - - 0.000002642 58.0
CMS1_k127_295089_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 1.6e-230 753.0
CMS1_k127_295089_1 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 373.0
CMS1_k127_2951297_0 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 523.0
CMS1_k127_2951297_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 393.0
CMS1_k127_2951297_10 30S ribosomal protein Thx K19033 - - 0.0009165 42.0
CMS1_k127_2951297_2 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 370.0
CMS1_k127_2951297_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 288.0
CMS1_k127_2951297_4 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006324 271.0
CMS1_k127_2951297_5 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001923 264.0
CMS1_k127_2951297_6 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001046 258.0
CMS1_k127_2951297_7 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000004496 122.0
CMS1_k127_2951297_8 - - - - 0.00000000000000000000000002036 113.0
CMS1_k127_2951297_9 Binding-protein-dependent transport system inner membrane component K02037 - - 0.000000000000000004608 87.0
CMS1_k127_2954094_0 - K06921 - - 0.00000000000000000000000000000000000000000000000000000000000007904 227.0
CMS1_k127_2954094_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000001218 165.0
CMS1_k127_2954094_2 toxin-antitoxin pair type II binding - - - 0.000000000000000000007266 93.0
CMS1_k127_2954094_4 PIN domain - - - 0.0000000003071 61.0
CMS1_k127_2970154_0 Transport of potassium into the cell K03549 - - 1.837e-227 722.0
CMS1_k127_2970154_1 Protein of unknown function (DUF1571) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 459.0
CMS1_k127_2970154_10 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000002711 80.0
CMS1_k127_2970154_11 Response regulator, receiver - - - 0.000000000001108 69.0
CMS1_k127_2970154_12 Sigma-54 interaction domain K00575 - 2.1.1.80 0.0000006536 54.0
CMS1_k127_2970154_2 YXWGXW repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 334.0
CMS1_k127_2970154_3 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004008 268.0
CMS1_k127_2970154_4 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001534 241.0
CMS1_k127_2970154_5 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000009647 165.0
CMS1_k127_2970154_6 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000012 138.0
CMS1_k127_2970154_7 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000002244 104.0
CMS1_k127_2970154_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000002523 111.0
CMS1_k127_2973769_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847 - 5.4.99.2 0.0 1164.0
CMS1_k127_2973769_1 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.106e-277 862.0
CMS1_k127_2973769_2 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 598.0
CMS1_k127_2973769_3 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 435.0
CMS1_k127_2973769_4 LAO AO transport system K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 436.0
CMS1_k127_2973769_5 Sodium:solute symporter family K03307 - - 0.00000000000000000000000000000000001765 137.0
CMS1_k127_2973769_6 Conserved carboxylase domain K01571,K01960 - 4.1.1.3,6.4.1.1 0.00000000000000000000000000000000008487 134.0
CMS1_k127_2973769_7 - - - - 0.00004768 54.0
CMS1_k127_2980922_0 4Fe-4S binding domain - - - 5.616e-232 735.0
CMS1_k127_2980922_1 Histidine kinase - - - 9.886e-198 644.0
CMS1_k127_2980922_2 PFAM aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 492.0
CMS1_k127_2980922_3 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 363.0
CMS1_k127_2980922_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008037 249.0
CMS1_k127_2980922_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
CMS1_k127_2980922_6 Sodium:solute symporter family K03307 - - 0.000000000000000000009463 92.0
CMS1_k127_298434_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000006051 190.0
CMS1_k127_298434_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000004849 121.0
CMS1_k127_298434_2 PDZ domain (Also known as DHR or GLGF) K04771 - 3.4.21.107 0.00000001285 59.0
CMS1_k127_298434_3 universal stress protein - - - 0.0000002079 59.0
CMS1_k127_2993248_0 HMGL-like - - - 6.003e-205 641.0
CMS1_k127_2993248_1 galactose-1-phosphate uridylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 575.0
CMS1_k127_2993248_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
CMS1_k127_2993248_3 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000125 60.0
CMS1_k127_2993248_4 Anti-sigma-28 factor, FlgM K02398 - - 0.000001489 54.0
CMS1_k127_299963_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 327.0
CMS1_k127_299963_1 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 302.0
CMS1_k127_299963_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 288.0
CMS1_k127_299963_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 290.0
CMS1_k127_299963_4 acetyltransferase K04766 - - 0.000000000000000000000000000000000000005452 153.0
CMS1_k127_299963_5 phosphinothricin N-acetyltransferase activity - - - 0.0000000000000000000000000000000000001917 149.0
CMS1_k127_299963_6 transcription factor binding - - - 0.000000000000000000000001056 106.0
CMS1_k127_3019461_0 FIST C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 487.0
CMS1_k127_3019461_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 474.0
CMS1_k127_3019461_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000000004629 173.0
CMS1_k127_3019461_11 HemY protein - - - 0.000000000000000000000000000000000000000000007607 167.0
CMS1_k127_3019461_12 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000001432 135.0
CMS1_k127_3019461_13 methylenetetrahydrofolate reductase (NAD(P)H) activity K00297 - 1.5.1.20 0.0000000000002196 71.0
CMS1_k127_3019461_14 HemY protein - - - 0.000000000006347 68.0
CMS1_k127_3019461_16 Heavy-metal resistance - - - 0.00005935 52.0
CMS1_k127_3019461_2 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 443.0
CMS1_k127_3019461_3 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 354.0
CMS1_k127_3019461_4 Belongs to the ABC transporter superfamily K02032,K10823 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 330.0
CMS1_k127_3019461_5 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007153 279.0
CMS1_k127_3019461_6 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000755 245.0
CMS1_k127_3019461_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000002068 235.0
CMS1_k127_3019461_8 PFAM adenylate cyclase K05873 - 4.6.1.1 0.0000000000000000000000000000000000000000000000001308 183.0
CMS1_k127_3019461_9 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000001336 179.0
CMS1_k127_3027454_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 331.0
CMS1_k127_3027454_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001799 261.0
CMS1_k127_3027454_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000001364 191.0
CMS1_k127_3027454_3 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000004211 54.0
CMS1_k127_3028935_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 511.0
CMS1_k127_3028935_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 317.0
CMS1_k127_3028935_2 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000008857 217.0
CMS1_k127_3028935_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000003201 188.0
CMS1_k127_3028935_4 Belongs to the acetyltransferase family. ArgA subfamily K00537,K00619 - 1.20.4.1,2.3.1.1 0.0000000000000000000000000006956 118.0
CMS1_k127_3028935_5 FecR protein - - - 0.000000000000000000002756 104.0
CMS1_k127_302968_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 548.0
CMS1_k127_302968_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003656 275.0
CMS1_k127_302968_2 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000818 108.0
CMS1_k127_3038662_0 PFAM ABC transporter K06158 - - 1.002e-245 773.0
CMS1_k127_3038662_1 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 330.0
CMS1_k127_3038662_2 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 296.0
CMS1_k127_3038662_3 PFAM Cytochrome c, bacterial - - - 0.0000000000000000000000000000000000000000222 154.0
CMS1_k127_3038662_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000001202 141.0
CMS1_k127_3050713_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 426.0
CMS1_k127_3050713_1 PHP-associated K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000004047 245.0
CMS1_k127_3050713_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000353 204.0
CMS1_k127_3050713_3 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000000000000000000000000001181 187.0
CMS1_k127_3050713_4 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000000000000000000000000000007673 173.0
CMS1_k127_3050713_5 Transposase - - - 0.0000000000000000000000002155 111.0
CMS1_k127_3050726_0 Sodium:sulfate symporter transmembrane region K14445 - - 2.314e-255 794.0
CMS1_k127_3050726_1 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 339.0
CMS1_k127_3050726_10 - - - - 0.00000000002243 66.0
CMS1_k127_3050726_11 Transposase K07491 - - 0.0000000243 59.0
CMS1_k127_3050726_13 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000004378 56.0
CMS1_k127_3050726_15 Curli production assembly transport component CsgG - - - 0.00007396 54.0
CMS1_k127_3050726_16 phosphorelay signal transduction system K01768,K19622 - 4.6.1.1 0.0002677 46.0
CMS1_k127_3050726_17 Transposase K07491 - - 0.0007427 42.0
CMS1_k127_3050726_2 phosphorelay signal transduction system K01768,K19622 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 311.0
CMS1_k127_3050726_3 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009427 243.0
CMS1_k127_3050726_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000001576 197.0
CMS1_k127_3050726_5 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000001774 191.0
CMS1_k127_3050726_6 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000002473 191.0
CMS1_k127_3050726_7 Cupin domain - - - 0.000000000000000000000000000000666 126.0
CMS1_k127_3050726_8 - - - - 0.000000000000000003109 89.0
CMS1_k127_3050726_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000007189 84.0
CMS1_k127_3061884_0 PFAM Acyl-CoA dehydrogenase - - - 5.281e-194 610.0
CMS1_k127_3061884_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 317.0
CMS1_k127_3061884_2 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000667 280.0
CMS1_k127_3061884_3 Transcriptional regulator K03655,K10439,K11708 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000006122 229.0
CMS1_k127_306751_0 Stage II sporulation protein M - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007368 274.0
CMS1_k127_306751_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000002129 240.0
CMS1_k127_306751_2 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000002288 184.0
CMS1_k127_306751_3 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000913 124.0
CMS1_k127_306751_4 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000001544 119.0
CMS1_k127_3095083_0 BadF BadG BcrA BcrD - - - 0.0 1394.0
CMS1_k127_3095083_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 398.0
CMS1_k127_3095083_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 355.0
CMS1_k127_3095083_3 Right handed beta helix region - - - 0.000000000000000000000000000000000000000000000000000002296 201.0
CMS1_k127_3095083_4 RNA recognition motif - - - 0.000000000000000000000000000005737 121.0
CMS1_k127_311196_0 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 582.0
CMS1_k127_311196_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004025 233.0
CMS1_k127_311196_2 Diguanylate cyclase K21084 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000007926 235.0
CMS1_k127_311196_3 S-adenosylmethionine decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000001312 197.0
CMS1_k127_311196_4 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000004887 161.0
CMS1_k127_311196_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000001666 146.0
CMS1_k127_311196_6 Transcriptional regulatory protein, C terminal K07658,K07668 - - 0.00000000000000000002269 95.0
CMS1_k127_3117447_0 AMP-binding enzyme K04110 - 6.2.1.25 4.376e-261 812.0
CMS1_k127_3117447_1 Sodium:solute symporter family K03307 - - 0.00000000000000000000002062 101.0
CMS1_k127_3117447_2 PFAM IS66 Orf2 like protein K07484 - - 0.000000000000000001822 85.0
CMS1_k127_3118845_0 PFAM ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009055 556.0
CMS1_k127_3118845_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001842 253.0
CMS1_k127_3119153_0 4Fe-4S dicluster domain - - - 4.385e-305 948.0
CMS1_k127_3119153_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 419.0
CMS1_k127_3119153_2 Electron transfer flavoprotein K03521 - - 0.000000000118 62.0
CMS1_k127_3125553_0 Carboxyl transferase domain K01615 - 4.1.1.70 5.191e-302 935.0
CMS1_k127_3125553_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 500.0
CMS1_k127_3125553_10 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 274.0
CMS1_k127_3125553_11 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000002349 224.0
CMS1_k127_3125553_12 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000044 189.0
CMS1_k127_3125553_13 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000004911 162.0
CMS1_k127_3125553_14 Uncharacterized conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000005469 149.0
CMS1_k127_3125553_15 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001362 136.0
CMS1_k127_3125553_16 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.000000000000000007615 92.0
CMS1_k127_3125553_17 Type II secretion system protein B K02451 - - 0.000164 53.0
CMS1_k127_3125553_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 483.0
CMS1_k127_3125553_3 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 455.0
CMS1_k127_3125553_4 PFAM Peptidoglycan-binding domain 1 protein K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 411.0
CMS1_k127_3125553_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 352.0
CMS1_k127_3125553_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 330.0
CMS1_k127_3125553_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 307.0
CMS1_k127_3125553_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 298.0
CMS1_k127_3125553_9 PFAM ABC transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002471 278.0
CMS1_k127_3126569_0 - - - - 0.0000000000000000000000000000000000000000000000006435 186.0
CMS1_k127_3126569_1 COGs COG2220 Zn-dependent hydrolase of the beta-lactamase fold - - - 0.000000000000000001476 87.0
CMS1_k127_3126569_2 SEC-C Motif Domain Protein - - - 0.000000000000000007729 93.0
CMS1_k127_3126569_3 - - - - 0.000001553 52.0
CMS1_k127_3134865_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 531.0
CMS1_k127_3134865_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 455.0
CMS1_k127_3134865_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 316.0
CMS1_k127_3134865_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008113 272.0
CMS1_k127_3134865_4 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000004397 220.0
CMS1_k127_3134865_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000004188 222.0
CMS1_k127_3134865_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000003245 143.0
CMS1_k127_3134865_7 - - - - 0.000000000000000005171 85.0
CMS1_k127_3152402_0 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 300.0
CMS1_k127_3152402_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003566 293.0
CMS1_k127_3152402_2 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000001085 158.0
CMS1_k127_3152402_3 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000002156 123.0
CMS1_k127_3153977_0 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 537.0
CMS1_k127_3153977_1 Extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 445.0
CMS1_k127_3153977_2 ATPases associated with a variety of cellular activities K05816,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 430.0
CMS1_k127_3153977_3 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 369.0
CMS1_k127_3153977_4 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 359.0
CMS1_k127_3153977_5 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000001115 168.0
CMS1_k127_3156073_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 509.0
CMS1_k127_3156073_1 Thioesterase superfamily K10806 - - 0.000000000000000000000000000000000000000000000000001354 184.0
CMS1_k127_3156073_2 helix_turn_helix gluconate operon transcriptional repressor K05799 - - 0.000000000000000000000001242 113.0
CMS1_k127_3163520_0 Histidine kinase - - - 2.159e-212 684.0
CMS1_k127_3163520_1 secondary active sulfate transmembrane transporter activity - - - 7.42e-206 649.0
CMS1_k127_3163520_10 Exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008463 259.0
CMS1_k127_3163520_11 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000721 234.0
CMS1_k127_3163520_12 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000706 222.0
CMS1_k127_3163520_13 GntR family - - - 0.0000000000000000000000000000000000000000000000000001383 193.0
CMS1_k127_3163520_14 Rieske [2Fe-2S] domain - - - 0.000000000000000000293 92.0
CMS1_k127_3163520_15 FCD - - - 0.00000000002218 69.0
CMS1_k127_3163520_16 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K00074 - 1.1.1.157 0.00000002638 60.0
CMS1_k127_3163520_17 PFAM RNA-directed DNA polymerase (Reverse transcriptase) - - - 0.000002198 52.0
CMS1_k127_3163520_2 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 586.0
CMS1_k127_3163520_3 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 582.0
CMS1_k127_3163520_4 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 379.0
CMS1_k127_3163520_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 388.0
CMS1_k127_3163520_6 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006573 348.0
CMS1_k127_3163520_7 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 316.0
CMS1_k127_3163520_8 3-oxoacid CoA-transferase, B subunit K01029,K01035 - 2.8.3.5,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 295.0
CMS1_k127_3163520_9 TIGRFAM 3-oxoacid CoA-transferase, A subunit K01034 - 2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 292.0
CMS1_k127_3163892_0 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 513.0
CMS1_k127_3163892_1 regulatory protein, FmdB family - - - 0.000006674 50.0
CMS1_k127_3165599_0 Conserved carboxylase domain - - - 3.186e-236 743.0
CMS1_k127_3165599_1 PFAM Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007651 555.0
CMS1_k127_3165599_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000007218 187.0
CMS1_k127_3165599_3 - - - - 0.000000000000000000000000000000000579 139.0
CMS1_k127_3165599_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000001942 92.0
CMS1_k127_3165599_5 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures - - - 0.00000002064 58.0
CMS1_k127_3185289_0 histidine kinase A domain protein - - - 0.00000000000000000000000000114 128.0
CMS1_k127_3185289_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000003651 85.0
CMS1_k127_3185721_0 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.468e-283 876.0
CMS1_k127_3185721_1 PFAM Acetyl-CoA hydrolase transferase - - - 1.367e-262 822.0
CMS1_k127_3185721_2 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 1.956e-223 698.0
CMS1_k127_3185721_3 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 606.0
CMS1_k127_3185721_5 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004162 254.0
CMS1_k127_3185721_6 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000382 241.0
CMS1_k127_3185721_7 CoA carboxylase activity K01615,K01965,K02160,K17490 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 2.1.3.1,4.1.1.70,6.4.1.3 0.0000000000000000000000000000002385 128.0
CMS1_k127_3200296_0 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009157 488.0
CMS1_k127_3200296_1 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000001213 231.0
CMS1_k127_3200296_2 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000002147 198.0
CMS1_k127_3200296_3 Thiamine-binding protein - - - 0.00000000000000000000000000000000000000007741 152.0
CMS1_k127_3200296_4 Putative molybdenum carrier - - - 0.0000000000000000000000000000000000000001121 161.0
CMS1_k127_3200296_5 Domain of unknown function (DUF3783) - - - 0.0000000000000000000000000000000000000253 148.0
CMS1_k127_3200296_6 - - - - 0.000000000006925 66.0
CMS1_k127_3200296_7 - K09986 - - 0.000000000121 64.0
CMS1_k127_3210466_0 Cys/Met metabolism PLP-dependent enzyme K10907,K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 541.0
CMS1_k127_3210466_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000007712 245.0
CMS1_k127_3210466_2 Domain of unknown function DUF302 - - - 0.000000001861 58.0
CMS1_k127_3237586_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.707e-278 863.0
CMS1_k127_3237586_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 421.0
CMS1_k127_3237586_2 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 352.0
CMS1_k127_3237586_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 310.0
CMS1_k127_3237586_4 PFAM ABC transporter substrate binding protein - - - 0.00000000000000000000003179 109.0
CMS1_k127_3241351_0 Belongs to the UPF0061 (SELO) family - - - 8.725e-211 666.0
CMS1_k127_3241351_2 synthase K00647 - 2.3.1.41 0.0000000000000000000000000000002426 128.0
CMS1_k127_3241351_3 - - - - 0.00000000000000000000000000004102 122.0
CMS1_k127_3241351_4 TPR repeat - - - 0.00000000009183 68.0
CMS1_k127_3287760_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 518.0
CMS1_k127_3287760_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 351.0
CMS1_k127_3287760_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 344.0
CMS1_k127_3287760_3 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000000000000001381 230.0
CMS1_k127_3287760_4 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000000005379 212.0
CMS1_k127_3287760_5 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000005191 165.0
CMS1_k127_3287760_6 - - - - 0.00000000000000000000000000000002115 128.0
CMS1_k127_3295522_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0 1086.0
CMS1_k127_3300939_0 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 587.0
CMS1_k127_3300939_1 - - - - 0.000000000000000000005923 93.0
CMS1_k127_3306713_0 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 611.0
CMS1_k127_3306713_1 Phosphonate ABC transporter, periplasmic K02044 - - 0.00000000000000000000000000000000000000000000000000000000000344 213.0
CMS1_k127_3306713_2 response regulator - - - 0.0000000000002927 74.0
CMS1_k127_3328714_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 517.0
CMS1_k127_3328714_1 protein conserved in bacteria K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 442.0
CMS1_k127_3328714_2 permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 381.0
CMS1_k127_3328714_3 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 315.0
CMS1_k127_3328714_4 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 304.0
CMS1_k127_3328714_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002131 277.0
CMS1_k127_3328714_6 Ferritin-like domain - - - 0.0000000000000000000000000000000000000000001151 163.0
CMS1_k127_3328714_7 UbiA prenyltransferase family - - - 0.0000000000000000003048 88.0
CMS1_k127_3336743_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.536e-270 842.0
CMS1_k127_3336743_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 549.0
CMS1_k127_3336743_10 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000000000000005028 180.0
CMS1_k127_3336743_11 PFAM Cache - - - 0.000000000000000000000000000000000000000000000001067 178.0
CMS1_k127_3336743_12 Diguanylate cyclase - - - 0.00000000016 74.0
CMS1_k127_3336743_13 protein conserved in bacteria K21470 - - 0.0000000002337 62.0
CMS1_k127_3336743_2 Bacterial regulatory protein, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 537.0
CMS1_k127_3336743_3 Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 516.0
CMS1_k127_3336743_4 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 501.0
CMS1_k127_3336743_5 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 460.0
CMS1_k127_3336743_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 433.0
CMS1_k127_3336743_7 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 367.0
CMS1_k127_3336743_8 Creatinine amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 329.0
CMS1_k127_3336743_9 oxidoreductase activity K08777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003004 276.0
CMS1_k127_3338795_0 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000000000000000000000004122 166.0
CMS1_k127_3338795_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000003189 133.0
CMS1_k127_3338795_2 Rhomboid family K19225 - 3.4.21.105 0.00000000212 67.0
CMS1_k127_3344444_0 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 360.0
CMS1_k127_3344444_1 PFAM ABC transporter related K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 334.0
CMS1_k127_3344444_2 ABC-type Fe3 transport system, periplasmic component - - - 0.00000000000000000000000000000000451 143.0
CMS1_k127_335470_0 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 8.884e-224 702.0
CMS1_k127_335470_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.0000000000000000000000000000000000000000000000000000000003747 209.0
CMS1_k127_335470_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000003161 173.0
CMS1_k127_3366902_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 532.0
CMS1_k127_3366902_1 PFAM aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 401.0
CMS1_k127_3366902_2 Prephenate dehydrogenase K00210 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009 287.0
CMS1_k127_3366902_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000002122 145.0
CMS1_k127_33750_0 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 580.0
CMS1_k127_33750_1 Acyl-CoA dehydrogenase type 2 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 573.0
CMS1_k127_33750_2 - - - - 0.00008545 51.0
CMS1_k127_337511_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 2.561e-213 678.0
CMS1_k127_337511_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000008638 70.0
CMS1_k127_33778_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1397.0
CMS1_k127_33778_1 Domain of unknown function (DUF362) K07138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 539.0
CMS1_k127_33778_2 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 321.0
CMS1_k127_33778_3 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008039 259.0
CMS1_k127_33778_4 TonB-dependent receptor plug K02014,K16092 - - 0.0000000000000000000000000000000000000000004675 161.0
CMS1_k127_33778_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000002587 106.0
CMS1_k127_33778_6 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000002053 74.0
CMS1_k127_3384213_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 480.0
CMS1_k127_3384213_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 455.0
CMS1_k127_3384213_2 PFAM Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 360.0
CMS1_k127_3384213_3 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000000000000000000001706 202.0
CMS1_k127_3384213_4 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000009664 150.0
CMS1_k127_3384213_5 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000001498 120.0
CMS1_k127_3384213_7 AAA domain (Cdc48 subfamily) K10943 - - 0.0000001182 59.0
CMS1_k127_3384213_8 PFAM Rubrerythrin - - - 0.0000002493 54.0
CMS1_k127_3384213_9 TIGRFAM hydrolase, TatD family K03424 - - 0.0000009454 51.0
CMS1_k127_33929_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 483.0
CMS1_k127_33929_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006502 249.0
CMS1_k127_33929_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000002074 219.0
CMS1_k127_33929_3 molybdopterin cofactor binding - - - 0.00000000000000000000000000000000000000000000000000567 185.0
CMS1_k127_33929_4 - - - - 0.00000000000000000000000000000000000000105 149.0
CMS1_k127_33929_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000002156 126.0
CMS1_k127_33929_6 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000008451 125.0
CMS1_k127_33929_7 4Fe-4S dicluster domain - - - 0.00000000000000000000000000008933 122.0
CMS1_k127_339901_0 poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 - - 0.000000000000000000000000000000000000000000000000002387 195.0
CMS1_k127_339901_1 GYD domain - - - 0.00000000000000000000000000000000000000008771 152.0
CMS1_k127_339901_10 - - - - 0.0004584 47.0
CMS1_k127_339901_3 PFAM Cold-shock K03704 - - 0.0000000000000000000000000000002682 123.0
CMS1_k127_339901_4 Phage portal protein - - - 0.0000000000000000000000000000005583 122.0
CMS1_k127_339901_5 Belongs to the UPF0109 family K06960 - - 0.0000000000000000000000000009232 113.0
CMS1_k127_339901_6 - - - - 0.000000000000000008713 85.0
CMS1_k127_339901_7 Terminase-like family - - - 0.000000000001206 67.0
CMS1_k127_339901_8 - - - - 0.000000001007 65.0
CMS1_k127_3399877_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1384.0
CMS1_k127_3399877_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 2.675e-213 672.0
CMS1_k127_3399877_10 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008612 267.0
CMS1_k127_3399877_11 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000004281 268.0
CMS1_k127_3399877_12 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000000000000000000000000000005308 198.0
CMS1_k127_3399877_13 - - - - 0.00000000000000000000000000000001775 132.0
CMS1_k127_3399877_14 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000006386 126.0
CMS1_k127_3399877_15 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000001576 112.0
CMS1_k127_3399877_16 - - - - 0.0000000000000000000007818 99.0
CMS1_k127_3399877_17 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000009312 90.0
CMS1_k127_3399877_18 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000004358 84.0
CMS1_k127_3399877_19 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000003115 70.0
CMS1_k127_3399877_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008318 539.0
CMS1_k127_3399877_20 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000003352 66.0
CMS1_k127_3399877_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 515.0
CMS1_k127_3399877_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 496.0
CMS1_k127_3399877_5 Major facilitator superfamily K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703 426.0
CMS1_k127_3399877_6 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009539 401.0
CMS1_k127_3399877_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 391.0
CMS1_k127_3399877_8 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 381.0
CMS1_k127_3399877_9 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 355.0
CMS1_k127_340776_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 458.0
CMS1_k127_340776_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 330.0
CMS1_k127_340776_2 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 299.0
CMS1_k127_34442_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1054.0
CMS1_k127_34442_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.891e-229 717.0
CMS1_k127_34442_2 sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 605.0
CMS1_k127_34442_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 520.0
CMS1_k127_34442_4 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 430.0
CMS1_k127_34442_5 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 325.0
CMS1_k127_34442_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000008216 227.0
CMS1_k127_34442_7 Domain of unknown function (DUF5011) - - - 0.0000000000000000000000000000000000000000000000000000000000000001801 241.0
CMS1_k127_34442_8 PFAM Metal-dependent hydrolase HDOD - - - 0.00000006976 58.0
CMS1_k127_34442_9 ABC transporter - - - 0.0000001085 65.0
CMS1_k127_345526_0 LUD domain - - - 0.0 1050.0
CMS1_k127_345526_1 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 566.0
CMS1_k127_345526_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 492.0
CMS1_k127_345526_3 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001246 280.0
CMS1_k127_345526_4 Lactate utilization protein B C K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003646 252.0
CMS1_k127_3510183_0 Receptor family ligand binding region K01999 - - 1.617e-217 681.0
CMS1_k127_3510183_1 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 591.0
CMS1_k127_3510183_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 511.0
CMS1_k127_3510183_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 447.0
CMS1_k127_3531085_0 PFAM Integrase catalytic - - - 7.03e-201 638.0
CMS1_k127_3531085_1 PFAM IstB domain protein ATP-binding protein - - - 0.000000000000000000000000009597 110.0
CMS1_k127_3560183_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.943e-279 867.0
CMS1_k127_3560183_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.661e-258 803.0
CMS1_k127_3560183_10 Protein of unknown function (DUF3187) - - - 0.00000000000000000000000006256 119.0
CMS1_k127_3560183_11 - - - - 0.000000000000002748 76.0
CMS1_k127_3560183_2 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 1.724e-245 772.0
CMS1_k127_3560183_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.532e-226 715.0
CMS1_k127_3560183_4 Dynamin family - - - 7.117e-195 632.0
CMS1_k127_3560183_5 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 584.0
CMS1_k127_3560183_6 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 335.0
CMS1_k127_3560183_7 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 319.0
CMS1_k127_3560183_8 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000001449 230.0
CMS1_k127_3560183_9 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000001542 223.0
CMS1_k127_357848_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 7.679e-268 832.0
CMS1_k127_357848_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 572.0
CMS1_k127_357848_2 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 520.0
CMS1_k127_357848_3 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.000000000000000000000000000000000000002349 147.0
CMS1_k127_3579773_0 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1009.0
CMS1_k127_3579773_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 599.0
CMS1_k127_3579773_2 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 298.0
CMS1_k127_357989_0 helix_turn_helix ASNC type K03718 - - 0.00000000000000000000000000000000000000000000000000000000001221 211.0
CMS1_k127_357989_1 Sulfite oxidase-like K00387 - 1.8.3.1 0.0000000000000000000005121 100.0
CMS1_k127_357989_2 Protein of unknown function (DUF2845) - - - 0.0000000000004374 74.0
CMS1_k127_359712_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1103.0
CMS1_k127_3603630_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.727e-311 977.0
CMS1_k127_3603630_1 Participates in both transcription termination and antitermination K02600 - - 7.323e-195 617.0
CMS1_k127_3603630_2 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 366.0
CMS1_k127_3603630_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 290.0
CMS1_k127_3603630_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000009253 261.0
CMS1_k127_3603630_5 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000008428 171.0
CMS1_k127_3603630_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000006891 152.0
CMS1_k127_3603630_7 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000000000000000222 139.0
CMS1_k127_3603630_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000005795 113.0
CMS1_k127_3607361_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 426.0
CMS1_k127_3607361_1 Electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 402.0
CMS1_k127_3607361_2 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 311.0
CMS1_k127_3607361_3 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 295.0
CMS1_k127_3607361_4 - - - - 0.00000000000000000000000000000000000001969 149.0
CMS1_k127_3610134_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.497e-321 1003.0
CMS1_k127_3610134_1 Multicopper oxidase - - - 1.641e-247 786.0
CMS1_k127_3610134_11 Heavy metal transport detoxification protein K17686 - 3.6.3.54 0.000001733 59.0
CMS1_k127_3610134_12 LTXXQ motif family protein - - - 0.0000161 54.0
CMS1_k127_3610134_2 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 574.0
CMS1_k127_3610134_3 Sulfatase-modifying factor enzyme 1 K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 397.0
CMS1_k127_3610134_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 300.0
CMS1_k127_3610134_5 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.000000000000000000000000000000000000003663 156.0
CMS1_k127_3610134_6 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.00000000000000000000002033 106.0
CMS1_k127_3610134_7 - - - - 0.0000000000000002948 85.0
CMS1_k127_3610134_8 - - - - 0.00000000003305 73.0
CMS1_k127_3610134_9 Heavy metal translocating P-type atpase K01533,K01534,K12954,K17686 - 3.6.3.3,3.6.3.4,3.6.3.5,3.6.3.54 0.00000001208 60.0
CMS1_k127_3610935_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 5.063e-239 764.0
CMS1_k127_3610935_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 410.0
CMS1_k127_3610935_2 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000004353 179.0
CMS1_k127_3610935_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000426 155.0
CMS1_k127_3610935_4 FixH - - - 0.0000000000000000000000001457 111.0
CMS1_k127_3610935_5 Mo-molybdopterin cofactor metabolic process K03636,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 0.000002502 54.0
CMS1_k127_3612168_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1313.0
CMS1_k127_3612168_1 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 2.707e-250 781.0
CMS1_k127_3612168_2 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 8.738e-234 729.0
CMS1_k127_3612168_3 [isocitrate dehydrogenase (NADP+)] phosphatase activity K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 490.0
CMS1_k127_3612168_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000002394 208.0
CMS1_k127_3612168_5 - - - - 0.0000000000002546 72.0
CMS1_k127_3613134_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 291.0
CMS1_k127_3613134_1 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000007786 239.0
CMS1_k127_3613134_2 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000001843 223.0
CMS1_k127_3613134_3 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000001207 173.0
CMS1_k127_3613134_4 response regulator, receiver K03413 - - 0.0000000000000000000000000000000000002728 145.0
CMS1_k127_3616286_0 4Fe-4S dicluster domain - - - 2.59e-321 995.0
CMS1_k127_3616286_1 Carboxyl transferase domain K01615 - 4.1.1.70 1.659e-304 940.0
CMS1_k127_3616286_10 electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000004255 255.0
CMS1_k127_3616286_11 ATPase associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000005531 209.0
CMS1_k127_3616286_12 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000009875 191.0
CMS1_k127_3616286_13 electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000001148 178.0
CMS1_k127_3616286_14 - - - - 0.000000000000000000000000000009202 124.0
CMS1_k127_3616286_15 - - - - 0.00000000000000000000000000002686 129.0
CMS1_k127_3616286_16 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.0000000000000000000000000009967 112.0
CMS1_k127_3616286_17 oxidoreductase activity - - - 0.00000000000003807 85.0
CMS1_k127_3616286_18 Transglutaminase-like superfamily - - - 0.00001369 49.0
CMS1_k127_3616286_19 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.0004311 51.0
CMS1_k127_3616286_2 AMP-binding enzyme K04110 - 6.2.1.25 3.003e-236 741.0
CMS1_k127_3616286_20 Amidase K01426 - 3.5.1.4 0.0008562 43.0
CMS1_k127_3616286_3 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 561.0
CMS1_k127_3616286_4 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 479.0
CMS1_k127_3616286_5 transcription factor binding K15836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 418.0
CMS1_k127_3616286_6 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 370.0
CMS1_k127_3616286_7 Amidase K01426,K19176 - 3.5.1.4,3.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 323.0
CMS1_k127_3616286_8 PFAM HPP family K07168 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003636 265.0
CMS1_k127_3616286_9 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005093 257.0
CMS1_k127_3618928_0 PFAM CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 0.0 1055.0
CMS1_k127_3618928_1 PFAM Alpha amylase, catalytic K00690,K05341,K05343 - 2.4.1.4,2.4.1.7,3.2.1.1,5.4.99.16 1.858e-287 895.0
CMS1_k127_3618928_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.398e-264 822.0
CMS1_k127_3618928_3 Sodium:alanine symporter family K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 585.0
CMS1_k127_3618928_4 CheY-like receiver, AAA-type ATPase, and DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 480.0
CMS1_k127_3618928_5 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006917 271.0
CMS1_k127_3618928_6 Transcription factor zinc-finger - - - 0.0000000000000000000000000000000000000002787 154.0
CMS1_k127_3618928_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000009597 147.0
CMS1_k127_3620810_0 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 1.104e-237 751.0
CMS1_k127_3620810_1 Transcriptional K13638 - - 0.00000000000000000000000000000000007206 137.0
CMS1_k127_3620810_2 Transcriptional regulator K21903 - - 0.000000000000000000000000000000008063 132.0
CMS1_k127_3620810_3 Thioredoxin domain - - - 0.000000000000000000000002015 111.0
CMS1_k127_3620810_4 PFAM Membrane transport protein MerF K19058 - - 0.000000000000002081 78.0
CMS1_k127_3620810_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000003711 57.0
CMS1_k127_3627566_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0 1094.0
CMS1_k127_3627566_1 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 4.787e-231 726.0
CMS1_k127_3627566_10 pfam abc K01995 - - 0.00000000000000000000000000000000000000000000000000000000000003897 222.0
CMS1_k127_3627566_11 - - - - 0.000000000000000000002628 103.0
CMS1_k127_3627566_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 555.0
CMS1_k127_3627566_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 457.0
CMS1_k127_3627566_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 400.0
CMS1_k127_3627566_5 C-terminal domain of 1-Cys peroxiredoxin K03386,K20011 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 346.0
CMS1_k127_3627566_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 303.0
CMS1_k127_3627566_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000141 272.0
CMS1_k127_3627566_8 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001487 286.0
CMS1_k127_3627566_9 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004985 252.0
CMS1_k127_362855_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 393.0
CMS1_k127_362855_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 327.0
CMS1_k127_362855_2 - - - - 0.00000000000000000000005964 104.0
CMS1_k127_3629327_0 PFAM type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 343.0
CMS1_k127_3629327_1 Pilus assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003274 294.0
CMS1_k127_3629327_2 - - - - 0.000000000000000001256 92.0
CMS1_k127_3629327_3 - - - - 0.000000002243 65.0
CMS1_k127_3630910_0 type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 526.0
CMS1_k127_3630910_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 464.0
CMS1_k127_3630910_10 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001015 271.0
CMS1_k127_3630910_11 Fimbrial assembly family protein K02461 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001855 262.0
CMS1_k127_3630910_12 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000008816 231.0
CMS1_k127_3630910_13 General secretion pathway protein C K02452 - - 0.0000000000000000000000000000000000000000000000000000000000004341 221.0
CMS1_k127_3630910_14 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000001358 190.0
CMS1_k127_3630910_15 Prokaryotic N-terminal methylation motif K02459 - - 0.0000000000000000000000000000000000000000000008536 175.0
CMS1_k127_3630910_16 MerR, DNA binding - - - 0.000000000000000000000000000000000000451 144.0
CMS1_k127_3630910_17 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000000000000000000002116 138.0
CMS1_k127_3630910_18 Type II secretion system (T2SS), protein M K02462 - - 0.000000000000000000000000000000005493 134.0
CMS1_k127_3630910_19 - - - - 0.0000000000000000000000349 110.0
CMS1_k127_3630910_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 416.0
CMS1_k127_3630910_20 Putative regulatory protein - - - 0.00000000000000000002173 92.0
CMS1_k127_3630910_21 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000000000000019 93.0
CMS1_k127_3630910_3 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 419.0
CMS1_k127_3630910_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 406.0
CMS1_k127_3630910_5 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 392.0
CMS1_k127_3630910_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 349.0
CMS1_k127_3630910_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 319.0
CMS1_k127_3630910_8 General secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 305.0
CMS1_k127_3630910_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 290.0
CMS1_k127_3631313_0 Elongation factor Tu domain 2 K06207 - - 5e-324 1002.0
CMS1_k127_3631313_1 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 456.0
CMS1_k127_3632132_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 359.0
CMS1_k127_3632132_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000005034 81.0
CMS1_k127_3636105_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 385.0
CMS1_k127_3636842_0 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000001898 214.0
CMS1_k127_3636842_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000001432 195.0
CMS1_k127_3636842_2 Transposase IS200 like - - - 0.0000000000000001093 83.0
CMS1_k127_3636842_3 nucleotidyltransferase activity K00984 - 2.7.7.47 0.00000000000000229 83.0
CMS1_k127_3636842_4 OsmC-like protein K06889,K07397 - - 0.00000000000001117 76.0
CMS1_k127_3638453_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.236e-290 908.0
CMS1_k127_3638453_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 619.0
CMS1_k127_3638453_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 530.0
CMS1_k127_3638453_3 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 369.0
CMS1_k127_3638453_4 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 342.0
CMS1_k127_3638453_5 belongs to the thioredoxin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 293.0
CMS1_k127_3638453_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000145 212.0
CMS1_k127_3638453_7 GAF domain K01768 - 4.6.1.1 0.00000000000000000006548 91.0
CMS1_k127_3638453_8 PilZ domain - - - 0.0000000005207 63.0
CMS1_k127_3639464_0 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 441.0
CMS1_k127_3639464_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001046 237.0
CMS1_k127_3639464_2 lyase activity - - - 0.00000000000000000000000000000000000000000000000000002119 201.0
CMS1_k127_3647350_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1208.0
CMS1_k127_3647350_1 FRG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 372.0
CMS1_k127_3647350_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 314.0
CMS1_k127_3647350_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000162 190.0
CMS1_k127_3647350_4 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000006031 157.0
CMS1_k127_3651725_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.184e-311 966.0
CMS1_k127_3651725_1 Periplasmic binding protein domain K01999,K11959 - - 6.832e-237 737.0
CMS1_k127_3651725_10 UreD urease accessory protein K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000132 269.0
CMS1_k127_3651725_11 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000001519 232.0
CMS1_k127_3651725_12 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000003183 226.0
CMS1_k127_3651725_13 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000001186 185.0
CMS1_k127_3651725_14 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.00000000000000000000000000000000000000000000001113 173.0
CMS1_k127_3651725_15 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.00000000000000000000000000000000000000000002619 164.0
CMS1_k127_3651725_16 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.00000000000000000000000000000000000000121 152.0
CMS1_k127_3651725_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000004171 114.0
CMS1_k127_3651725_18 FabA-like domain K02372 - 4.2.1.59 0.00000000000000000001761 95.0
CMS1_k127_3651725_19 Succinyl-CoA ligase like flavodoxin domain - - - 0.00000000000001411 78.0
CMS1_k127_3651725_2 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 558.0
CMS1_k127_3651725_3 Branched-chain amino acid transport system / permease component K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 527.0
CMS1_k127_3651725_4 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768,K01769,K11959 - 4.6.1.1,4.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 406.0
CMS1_k127_3651725_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007981 376.0
CMS1_k127_3651725_6 abc transporter atp-binding protein K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 367.0
CMS1_k127_3651725_7 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 325.0
CMS1_k127_3651725_8 ABC transporter K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 328.0
CMS1_k127_3651725_9 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 323.0
CMS1_k127_3652830_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 611.0
CMS1_k127_3652830_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 386.0
CMS1_k127_3663956_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568,K12137 - - 1.515e-209 667.0
CMS1_k127_3663956_1 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 477.0
CMS1_k127_3663956_2 Proton-conducting membrane transporter K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000411 261.0
CMS1_k127_3663956_3 Gaf domain - - - 0.0000000000000000000000000000000000000367 154.0
CMS1_k127_3663956_4 - - - - 0.0000000000000000006906 89.0
CMS1_k127_3663956_5 Histidine kinase - - - 0.000000000006527 76.0
CMS1_k127_366770_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 498.0
CMS1_k127_366770_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 329.0
CMS1_k127_366770_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009638 255.0
CMS1_k127_366770_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000008597 156.0
CMS1_k127_366770_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.000000000000000000000000000343 119.0
CMS1_k127_366770_5 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000000000000000000000000113 115.0
CMS1_k127_3699375_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1234.0
CMS1_k127_3699375_1 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 1.484e-198 623.0
CMS1_k127_3699375_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 544.0
CMS1_k127_3699375_3 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 447.0
CMS1_k127_3699375_4 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 377.0
CMS1_k127_3699375_5 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 314.0
CMS1_k127_3699375_6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000001256 202.0
CMS1_k127_3699375_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000005628 160.0
CMS1_k127_3699375_8 OstA-like protein K09774 - - 0.00000000000000000000000000000004237 132.0
CMS1_k127_3699375_9 Chemotaxis phosphatase CheX K03409 - - 0.00000000000000000000002394 105.0
CMS1_k127_3700242_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006039 273.0
CMS1_k127_3700242_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.000000000000000000000000000001369 123.0
CMS1_k127_3700242_2 DinB superfamily - - - 0.000007176 55.0
CMS1_k127_3713526_0 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 397.0
CMS1_k127_3713526_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001317 293.0
CMS1_k127_3713526_2 Putative RNA methylase family UPF0020 K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000009465 241.0
CMS1_k127_3713526_3 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000003099 193.0
CMS1_k127_3713526_4 Cupin domain K11312 - - 0.0000000000000000000000000000000000006088 142.0
CMS1_k127_3717025_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 390.0
CMS1_k127_3717025_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000004432 162.0
CMS1_k127_3719027_0 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000001788 241.0
CMS1_k127_3719027_2 Retinal pigment epithelial membrane protein K11159 - - 0.00004116 48.0
CMS1_k127_3723823_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000006721 202.0
CMS1_k127_3723823_1 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000000003801 135.0
CMS1_k127_3723823_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000002147 116.0
CMS1_k127_3723823_3 RibD C-terminal domain - - - 0.0000000000000000001648 89.0
CMS1_k127_3729293_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 356.0
CMS1_k127_3729293_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 297.0
CMS1_k127_3729293_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006184 253.0
CMS1_k127_3729293_3 SMART Fibronectin type III domain protein - - - 0.00000000003129 70.0
CMS1_k127_3730257_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 583.0
CMS1_k127_3730257_1 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000007661 115.0
CMS1_k127_3730257_2 - - - - 0.00000000000000000000000008331 113.0
CMS1_k127_3730257_3 THUMP - - - 0.000004399 49.0
CMS1_k127_3730257_4 Putative regulatory protein - - - 0.00002388 49.0
CMS1_k127_3730349_0 Evidence 4 Homologs of previously reported genes of - - - 5.163e-199 632.0
CMS1_k127_3730349_1 PFAM Fe-S cluster domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 323.0
CMS1_k127_3730349_2 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 307.0
CMS1_k127_3730349_3 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001757 285.0
CMS1_k127_3730349_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000005296 190.0
CMS1_k127_3730349_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000008839 193.0
CMS1_k127_3730349_6 NmrA family - - - 0.000000000000000000000000000000000000000000003354 174.0
CMS1_k127_3730349_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000002575 157.0
CMS1_k127_3730349_8 Acyl-CoA thioester hydrolase, YbgC YbaW family K12500 - - 0.000000000000000000000000000000000000000009122 158.0
CMS1_k127_3732527_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 452.0
CMS1_k127_3732527_1 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 416.0
CMS1_k127_3732527_2 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 356.0
CMS1_k127_3732527_3 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 357.0
CMS1_k127_3732527_4 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008012 269.0
CMS1_k127_3732527_5 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000001205 142.0
CMS1_k127_3735799_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 435.0
CMS1_k127_3735799_1 acyl-CoA dehydrogenase K09456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 424.0
CMS1_k127_3735799_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 295.0
CMS1_k127_3735799_3 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.000000000000000000000000000000000000000000000000000000000000003082 223.0
CMS1_k127_3742375_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 1.018e-270 862.0
CMS1_k127_3742375_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 293.0
CMS1_k127_3742375_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001788 261.0
CMS1_k127_3742375_3 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000001486 153.0
CMS1_k127_3742375_4 Fe-S-cluster-containing hydrogenase K08358 - - 0.00000000000000000002236 92.0
CMS1_k127_3742375_5 helix_turn_helix multiple antibiotic resistance protein K06075 - - 0.00000000000000004489 87.0
CMS1_k127_3742375_6 component of anaerobic - - - 0.00000000000000148 85.0
CMS1_k127_3744091_0 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 497.0
CMS1_k127_3744091_1 PFAM Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 477.0
CMS1_k127_3744091_2 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000002714 221.0
CMS1_k127_3744091_3 PAAR motif - - - 0.0000000000000000000000000000000000000000003817 159.0
CMS1_k127_3744091_4 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000000000000006911 153.0
CMS1_k127_3745019_0 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 465.0
CMS1_k127_3745019_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 294.0
CMS1_k127_3745019_2 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000018 253.0
CMS1_k127_3745019_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000002052 252.0
CMS1_k127_3745019_4 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 GO:0003674,GO:0003824,GO:0016740,GO:0016772 - 0.0000000000000000000000000000000000000000000000000000000000000000008417 232.0
CMS1_k127_3745019_5 Putative lumazine-binding - - - 0.000000001372 65.0
CMS1_k127_3746649_0 4Fe-4S dicluster domain - - - 0.0 1023.0
CMS1_k127_3746649_1 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 448.0
CMS1_k127_3746649_2 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.000000000000000000000000000000000000000000000003961 176.0
CMS1_k127_3746649_3 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.00000000000000000000000000000000000000001075 159.0
CMS1_k127_3746649_4 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000003247 134.0
CMS1_k127_3746649_5 - - - - 0.0000005909 54.0
CMS1_k127_3747834_0 Domain of unknown function (DUF3394) - - - 0.0 1043.0
CMS1_k127_3747834_1 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000000000003628 186.0
CMS1_k127_3747834_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000004393 157.0
CMS1_k127_3747834_3 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.00000000000000000000000000000000008629 138.0
CMS1_k127_3747834_4 - - - - 0.00000000000002181 80.0
CMS1_k127_3747834_5 Protein of unknown function (DUF1566) - - - 0.00000000004085 70.0
CMS1_k127_3754749_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 2.318e-198 622.0
CMS1_k127_3754749_1 PFAM Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 322.0
CMS1_k127_3754749_2 PFAM peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000007257 265.0
CMS1_k127_3754749_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000001262 240.0
CMS1_k127_3759495_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.0 1148.0
CMS1_k127_3766069_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007552 461.0
CMS1_k127_3766069_1 - - - - 0.0000000000000000000000000000000000000000000000001003 192.0
CMS1_k127_3766069_2 C-C_Bond_Lyase of the TIM-Barrel fold K01644,K18292 - 4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000004178 153.0
CMS1_k127_3766427_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 584.0
CMS1_k127_3766427_1 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 535.0
CMS1_k127_3766427_2 plastoquinone (Complex I) K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 468.0
CMS1_k127_3766427_3 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
CMS1_k127_3766427_4 Chromate resistance exported protein - - - 0.000000000000000000000002205 104.0
CMS1_k127_3767925_0 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 369.0
CMS1_k127_3767925_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000001197 173.0
CMS1_k127_3767925_2 Universal stress protein - - - 0.000000000000000000000000000000000000000000009152 167.0
CMS1_k127_3767925_3 Type VI secretion system effector, Hcp K11903 - - 0.000000618 51.0
CMS1_k127_3773065_0 Receptor K02014,K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 609.0
CMS1_k127_3773065_1 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 558.0
CMS1_k127_3773065_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 369.0
CMS1_k127_3773065_3 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 352.0
CMS1_k127_3779421_0 Nitrate reductase, beta subunit K00371,K17051 - 1.7.5.1 1.894e-234 731.0
CMS1_k127_3779421_1 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 301.0
CMS1_k127_3779421_2 Nitrate reductase delta subunit K00373 - - 0.0000000000000000000000000000000000000145 152.0
CMS1_k127_3779421_3 PFAM major facilitator superfamily MFS_1 K02575 GO:0001666,GO:0006950,GO:0008150,GO:0009628,GO:0019222,GO:0031323,GO:0036293,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0062012,GO:0065007,GO:0070482,GO:0090352,GO:1903314 - 0.0005322 47.0
CMS1_k127_3779641_0 PFAM aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 524.0
CMS1_k127_3779641_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 285.0
CMS1_k127_3779641_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000001012 231.0
CMS1_k127_3780993_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.484e-269 838.0
CMS1_k127_3780993_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.478e-225 702.0
CMS1_k127_3780993_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 474.0
CMS1_k127_3780993_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 333.0
CMS1_k127_3780993_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000001667 158.0
CMS1_k127_3780993_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000005682 48.0
CMS1_k127_3782708_0 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 9.519e-243 752.0
CMS1_k127_3782708_1 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000008787 203.0
CMS1_k127_3785200_0 MMPL family K07003 - - 1.796e-257 830.0
CMS1_k127_3785200_1 HNH endonuclease - - - 0.00000000000001109 77.0
CMS1_k127_3785200_2 Adenylate cyclase K11265 - 4.6.1.1 0.0002127 46.0
CMS1_k127_3785449_0 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 573.0
CMS1_k127_3785449_1 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 520.0
CMS1_k127_3785449_2 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337,K21008 GO:0000270,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0019899,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043085,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044093,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000004335 96.0
CMS1_k127_3788899_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.0 1208.0
CMS1_k127_3788899_1 Enoyl-CoA hydratase/isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 4.083e-216 675.0
CMS1_k127_3788899_2 Alcohol dehydrogenase GroES-like domain K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 551.0
CMS1_k127_3797759_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 492.0
CMS1_k127_3797759_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008676 284.0
CMS1_k127_3797759_2 HD domain K07814 - - 0.0000000000000000000000000000000665 142.0
CMS1_k127_3799783_0 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 454.0
CMS1_k127_3799783_1 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000005987 141.0
CMS1_k127_3799783_2 Uncharacterized protein K02A2.6-like - - - 0.00004334 55.0
CMS1_k127_3814597_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 455.0
CMS1_k127_3814597_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 308.0
CMS1_k127_3814597_2 4Fe-4S dicluster domain - - - 0.0000000000000000001066 89.0
CMS1_k127_3817301_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.11e-199 632.0
CMS1_k127_3817301_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 369.0
CMS1_k127_3817301_10 Rubrerythrin - - - 0.00000000000000000000000000000000007242 139.0
CMS1_k127_3817301_11 - - - - 0.000000000955 61.0
CMS1_k127_3817301_13 Putative molybdenum carrier - - - 0.000006426 54.0
CMS1_k127_3817301_2 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 327.0
CMS1_k127_3817301_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 316.0
CMS1_k127_3817301_4 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
CMS1_k127_3817301_5 TIGRFAM geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000762 257.0
CMS1_k127_3817301_6 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000001398 251.0
CMS1_k127_3817301_7 - - - - 0.00000000000000000000000000000000000000000004625 165.0
CMS1_k127_3817301_8 Rubrerythrin - - - 0.000000000000000000000000000000000002818 144.0
CMS1_k127_3817301_9 MltA-interacting MipA family protein K07274 - - 0.00000000000000000000000000000000002134 142.0
CMS1_k127_3818052_0 ABC transporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 436.0
CMS1_k127_3818052_1 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000384 246.0
CMS1_k127_3818052_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002197 232.0
CMS1_k127_3818285_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 551.0
CMS1_k127_3818285_1 - - - - 0.0000000000000000000000000000000007704 149.0
CMS1_k127_3818285_2 - - - - 0.00000000000000000000000000000001038 145.0
CMS1_k127_3818285_3 - - - - 0.000000000000000000000005044 118.0
CMS1_k127_3818285_4 COG1595 DNA-directed RNA polymerase specialized sigma K03088 - - 0.00000000000000000146 93.0
CMS1_k127_3818285_6 Transglutaminase-like superfamily - - - 0.0002427 46.0
CMS1_k127_3819896_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 475.0
CMS1_k127_3819896_1 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 413.0
CMS1_k127_3819896_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10909,K14986 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 316.0
CMS1_k127_3819896_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001534 271.0
CMS1_k127_3819896_4 PFAM response regulator receiver - - - 0.000000000000000000000003938 106.0
CMS1_k127_3819896_5 - - - - 0.000000000000000000001069 97.0
CMS1_k127_3819896_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000002746 53.0
CMS1_k127_3819896_7 Rhodanese Homology Domain - - - 0.000004138 55.0
CMS1_k127_3824046_0 Rhodopirellula transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 304.0
CMS1_k127_3824046_1 PhoQ Sensor - - - 0.0000000000000000245 85.0
CMS1_k127_3824046_2 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000001787 80.0
CMS1_k127_3826840_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 429.0
CMS1_k127_3826840_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 383.0
CMS1_k127_3826840_2 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000002141 133.0
CMS1_k127_3826840_3 Diguanylate cyclase - - - 0.00000000000007095 85.0
CMS1_k127_3831810_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 451.0
CMS1_k127_3831810_1 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 339.0
CMS1_k127_3839514_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 297.0
CMS1_k127_3839514_1 NHL repeat - - - 0.0000000000000000008435 96.0
CMS1_k127_38449_0 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 509.0
CMS1_k127_38449_1 LysR family K03576 - - 0.00000000000000000000000000000000000000000000001365 178.0
CMS1_k127_3856047_0 AAA ATPase forming ring-shaped complexes K13527 GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 439.0
CMS1_k127_3865454_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000001618 235.0
CMS1_k127_3865454_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000001013 64.0
CMS1_k127_3865454_2 Transposase - - - 0.0000007485 55.0
CMS1_k127_3867660_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1133.0
CMS1_k127_3867660_1 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000000000000000001502 172.0
CMS1_k127_3867660_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000003987 159.0
CMS1_k127_3867660_3 PFAM nucleoside H symporter K05820 - - 0.000000004561 58.0
CMS1_k127_3873459_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.743e-296 922.0
CMS1_k127_3873459_1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 294.0
CMS1_k127_3873459_10 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 - 0.000003652 51.0
CMS1_k127_3873459_2 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003037 266.0
CMS1_k127_3873459_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042,K18121 - 1.1.1.31,1.1.1.60,1.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000001346 263.0
CMS1_k127_3873459_5 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000003772 209.0
CMS1_k127_3873459_6 threonine efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000002206 210.0
CMS1_k127_3873459_7 PFAM isochorismatase hydrolase - - - 0.0000000000000000000000000000000000000000000000000000001303 200.0
CMS1_k127_3873459_8 - - - - 0.000000000000001298 85.0
CMS1_k127_3873459_9 Glutaredoxin - - - 0.0000000000006958 70.0
CMS1_k127_3879632_0 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 327.0
CMS1_k127_3879632_1 PFAM Host attachment protein - - - 0.00000000000000000000000000000000000000000000000000000000003156 209.0
CMS1_k127_3879632_2 MHC class II protein binding, via antigen binding groove K06826 GO:0001655,GO:0001822,GO:0003674,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005604,GO:0005605,GO:0005623,GO:0005886,GO:0007155,GO:0007160,GO:0007275,GO:0008150,GO:0009986,GO:0009987,GO:0010810,GO:0010811,GO:0016020,GO:0016043,GO:0022610,GO:0030155,GO:0030198,GO:0031012,GO:0031589,GO:0032501,GO:0032502,GO:0032835,GO:0032836,GO:0043062,GO:0043236,GO:0043237,GO:0043394,GO:0044420,GO:0044421,GO:0044464,GO:0044877,GO:0045785,GO:0048513,GO:0048518,GO:0048731,GO:0048856,GO:0050789,GO:0050840,GO:0062023,GO:0065007,GO:0071711,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0097367 - 0.00000009588 66.0
CMS1_k127_3887399_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 533.0
CMS1_k127_3887399_1 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 543.0
CMS1_k127_3887399_2 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000305 282.0
CMS1_k127_3888620_0 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000002235 194.0
CMS1_k127_3888620_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000002854 168.0
CMS1_k127_3888620_3 PFAM Methyltransferase type 11 - - - 0.0003809 48.0
CMS1_k127_3891712_0 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000003692 194.0
CMS1_k127_3891712_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000008227 173.0
CMS1_k127_3891712_2 LUD domain - - - 0.0000000000000000000000000000001884 130.0
CMS1_k127_3891712_3 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000004139 122.0
CMS1_k127_3893307_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 7.152e-216 682.0
CMS1_k127_3893307_1 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 442.0
CMS1_k127_3893307_2 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 311.0
CMS1_k127_3893307_3 helicase K07464,K10844 - 3.1.12.1,3.6.4.12 0.00000000000000000000000000000007278 130.0
CMS1_k127_3906007_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 462.0
CMS1_k127_3906007_1 Biotin-lipoyl like K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001694 280.0
CMS1_k127_3906007_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000249 230.0
CMS1_k127_3906007_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000002354 183.0
CMS1_k127_3906007_4 Domain of unknown function (DUF1956) - - - 0.00000000000000000000000000000000000000000004463 169.0
CMS1_k127_3906007_5 - - - - 0.000000000000000000000000000000000000000158 155.0
CMS1_k127_3911146_0 Phosphonate ABC transporter, periplasmic K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 390.0
CMS1_k127_3911146_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 350.0
CMS1_k127_3911146_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 329.0
CMS1_k127_3911146_3 Cache_2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 344.0
CMS1_k127_3911146_4 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.00000003289 55.0
CMS1_k127_3911146_5 Antibiotic biosynthesis monooxygenase - - - 0.00001756 47.0
CMS1_k127_3912381_0 Pyridine nucleotide-disulphide oxidoreductase K03388,K15022 - 1.17.1.10,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1060.0
CMS1_k127_3912381_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 307.0
CMS1_k127_3912381_10 CHC2 zinc finger - - - 0.000005069 52.0
CMS1_k127_3912381_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 285.0
CMS1_k127_3912381_3 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000209 275.0
CMS1_k127_3912381_4 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000002732 205.0
CMS1_k127_3912381_5 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000001272 185.0
CMS1_k127_3912381_6 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000000000002564 164.0
CMS1_k127_3912381_7 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000002857 124.0
CMS1_k127_3912381_8 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000002286 132.0
CMS1_k127_3912381_9 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000009861 90.0
CMS1_k127_3915943_0 DEAD DEAH box helicase - - - 5.642e-266 838.0
CMS1_k127_3915943_1 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 535.0
CMS1_k127_3915943_2 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 383.0
CMS1_k127_3915943_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000659 224.0
CMS1_k127_3915943_4 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000007092 183.0
CMS1_k127_3915943_5 response to stress - - - 0.0000000000000000000000000000000000006069 144.0
CMS1_k127_3915943_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000001306 132.0
CMS1_k127_3921725_0 PFAM sigma-54 factor interaction domain-containing protein - - - 8.963e-207 659.0
CMS1_k127_3921725_1 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 528.0
CMS1_k127_3921725_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 370.0
CMS1_k127_3921725_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K20023 - 4.2.1.156,4.2.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000004904 248.0
CMS1_k127_3921725_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.00000000000000000000000000000000000000000000000000000000001333 209.0
CMS1_k127_3921725_5 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000007276 147.0
CMS1_k127_3921725_6 Alanine-zipper, major outer membrane lipoprotein - - - 0.0000000000000000000001919 99.0
CMS1_k127_3921725_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000008363 60.0
CMS1_k127_3921725_8 SMART Chromosomal replication initiator DnaA domain - - - 0.0001999 50.0
CMS1_k127_3927622_0 Peptidase M16C associated K06972 - - 0.0 1105.0
CMS1_k127_3927622_1 Methylase involved in ubiquinone menaquinone biosynthesis K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 383.0
CMS1_k127_3927622_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 317.0
CMS1_k127_3927622_3 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 316.0
CMS1_k127_3927622_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 304.0
CMS1_k127_3927622_5 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000003385 194.0
CMS1_k127_3927622_6 protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000006201 157.0
CMS1_k127_3927622_7 - - - - 0.00000000000000000000000000000006184 129.0
CMS1_k127_3927622_8 Putative zinc-finger - - - 0.0000000004926 64.0
CMS1_k127_3933861_0 Receptor family ligand binding region K01999 - - 3.209e-209 655.0
CMS1_k127_3933861_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 460.0
CMS1_k127_3933861_2 - - - - 0.0000000000000001835 80.0
CMS1_k127_3939053_0 Alpha amylase catalytic - - - 0.0 1945.0
CMS1_k127_3939053_1 phosphorylase K00688 - 2.4.1.1 0.0 1094.0
CMS1_k127_3939053_2 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 388.0
CMS1_k127_3939053_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000003031 156.0
CMS1_k127_3939053_4 PFAM Glycoside hydrolase, family 13 - - - 0.00000000000000000000000002467 111.0
CMS1_k127_3954041_0 Alkaline and neutral invertase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 564.0
CMS1_k127_3954041_1 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000004066 150.0
CMS1_k127_3954041_2 HAD-superfamily hydrolase, subfamily IIB - - - 0.000000000000003283 78.0
CMS1_k127_3959704_0 4Fe-4S single cluster domain K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 366.0
CMS1_k127_3959704_1 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 298.0
CMS1_k127_3959704_2 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 284.0
CMS1_k127_3959704_3 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001281 281.0
CMS1_k127_3959704_4 PFAM Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000000000000000000000000000000000000001724 209.0
CMS1_k127_3959704_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001714 208.0
CMS1_k127_3959704_6 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000005824 94.0
CMS1_k127_3959704_7 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.0008004 51.0
CMS1_k127_3960186_0 Phosphoenolpyruvate carboxykinase N-terminal domain K01596 - 4.1.1.32 3.597e-320 990.0
CMS1_k127_3960186_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 531.0
CMS1_k127_3960186_10 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000004954 243.0
CMS1_k127_3960186_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000001568 181.0
CMS1_k127_3960186_12 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.0000000000000000000000000000000000000000000007625 174.0
CMS1_k127_3960186_13 Cupin domain - - - 0.000000000000000000000000000000000000000002166 159.0
CMS1_k127_3960186_14 PFAM Cold-shock K03704 - - 0.000000000000000000000000000000002162 129.0
CMS1_k127_3960186_15 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000003955 124.0
CMS1_k127_3960186_16 - - - - 0.00000000000000000002215 93.0
CMS1_k127_3960186_17 Protein of unknown function (DUF1232) - - - 0.000000000000000002284 88.0
CMS1_k127_3960186_18 - - - - 0.00000006339 61.0
CMS1_k127_3960186_19 Amino-acid acetyltransferase K14682 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1 0.000007137 57.0
CMS1_k127_3960186_2 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 463.0
CMS1_k127_3960186_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 389.0
CMS1_k127_3960186_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 350.0
CMS1_k127_3960186_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 318.0
CMS1_k127_3960186_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004319 268.0
CMS1_k127_3960186_7 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004632 257.0
CMS1_k127_3960186_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005634 273.0
CMS1_k127_3960186_9 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000363 247.0
CMS1_k127_3960209_0 PFAM Curli production assembly transport component CsgG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 304.0
CMS1_k127_3960209_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000005 214.0
CMS1_k127_3970475_0 Domain related to MnhB subunit of Na+/H+ antiporter K05566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 369.0
CMS1_k127_3970475_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004998 282.0
CMS1_k127_3970475_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.000000000000000000000000000000000000000000002125 174.0
CMS1_k127_3970475_3 Na+/H+ ion antiporter subunit K05569 - - 0.00000000000000000000000000000000000000000003547 167.0
CMS1_k127_3970475_4 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.0000000000000000000000000000001038 132.0
CMS1_k127_3970475_5 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.000000000000000000000000000007999 121.0
CMS1_k127_3970475_6 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.000000000644 61.0
CMS1_k127_3974597_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 411.0
CMS1_k127_3974597_1 PFAM Glycosyl transferase, family 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 385.0
CMS1_k127_3974597_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002851 285.0
CMS1_k127_3974597_3 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002121 269.0
CMS1_k127_3974597_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000001942 224.0
CMS1_k127_3974597_5 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000003617 205.0
CMS1_k127_3974597_6 Transposase DDE domain - - - 0.000000000000000000000000000000000000000007585 158.0
CMS1_k127_3974597_7 Transposase - - - 0.0000000000000000000001653 102.0
CMS1_k127_3974597_8 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000791 66.0
CMS1_k127_3974597_9 TIGRFAM methyltransferase FkbM - - - 0.00001587 49.0
CMS1_k127_3982141_0 Carboxyl transferase domain K01969,K13778 - 6.4.1.4,6.4.1.5 2.457e-252 785.0
CMS1_k127_3982141_1 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000222 234.0
CMS1_k127_3983100_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 8.608e-278 857.0
CMS1_k127_3983100_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.963e-205 640.0
CMS1_k127_3983100_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 452.0
CMS1_k127_3983100_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000002022 179.0
CMS1_k127_3985971_0 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 456.0
CMS1_k127_3985971_1 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 406.0
CMS1_k127_3985971_2 - - - - 0.000000000000001183 81.0
CMS1_k127_3992895_0 PFAM transposase IS4 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 540.0
CMS1_k127_3992895_1 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000003974 211.0
CMS1_k127_3992895_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000001153 201.0
CMS1_k127_3999045_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1168.0
CMS1_k127_3999045_1 SMART Elongator protein 3 MiaB NifB - - - 2.593e-286 902.0
CMS1_k127_3999045_10 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000003233 89.0
CMS1_k127_3999045_11 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000005374 87.0
CMS1_k127_3999045_12 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000001632 70.0
CMS1_k127_3999045_2 PFAM tRNA synthetase class II (D K and N) K01893 - 6.1.1.22 4.911e-203 640.0
CMS1_k127_3999045_3 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 2.067e-202 642.0
CMS1_k127_3999045_4 Thymidylate synthase K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 477.0
CMS1_k127_3999045_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 416.0
CMS1_k127_3999045_6 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 327.0
CMS1_k127_3999045_7 Putative exonuclease, RdgC - - - 0.0000000000000000000000000000000000000000000000000000000000000000896 228.0
CMS1_k127_3999045_8 May be involved in recombination - - - 0.0000000000000000000000000000000000000000000000000000000353 201.0
CMS1_k127_3999045_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000875 115.0
CMS1_k127_3999274_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 5.425e-255 792.0
CMS1_k127_3999274_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.083e-213 668.0
CMS1_k127_3999274_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 612.0
CMS1_k127_3999274_3 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 539.0
CMS1_k127_3999274_4 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 303.0
CMS1_k127_3999274_5 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000000000000001067 215.0
CMS1_k127_3999274_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000001535 179.0
CMS1_k127_3999274_7 S-layer homology domain - - - 0.00000000000006424 77.0
CMS1_k127_4000395_0 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 482.0
CMS1_k127_4000395_1 - - - - 0.0000000000000000000000000000000000000000000000000000006071 194.0
CMS1_k127_4000395_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K13017 - 2.6.1.98 0.00000000000000000000001242 102.0
CMS1_k127_4000395_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K13017 - 2.6.1.98 0.000000003995 61.0
CMS1_k127_4000405_0 glutamate dehydrogenase [NAD(P)+] activity K00262 - 1.4.1.4 3.413e-197 618.0
CMS1_k127_4000405_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 571.0
CMS1_k127_4000405_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000004702 141.0
CMS1_k127_4000405_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000002709 113.0
CMS1_k127_4000405_4 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014,K16089 - - 0.0002298 44.0
CMS1_k127_4022748_0 RNA binding S1 domain protein K06959 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 540.0
CMS1_k127_4022748_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 432.0
CMS1_k127_4022748_2 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 360.0
CMS1_k127_4022748_3 response regulator receiver K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 356.0
CMS1_k127_4022748_4 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 312.0
CMS1_k127_4022748_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000002578 224.0
CMS1_k127_4022748_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000009558 195.0
CMS1_k127_4022748_7 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000142 179.0
CMS1_k127_4022748_8 Catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.0000000000000000000000000000000000000000000008073 173.0
CMS1_k127_4022748_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000004576 103.0
CMS1_k127_4036362_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 379.0
CMS1_k127_4036362_3 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000249 100.0
CMS1_k127_4036362_4 - - - - 0.0000000000004052 74.0
CMS1_k127_4036362_5 - - - - 0.00000000000614 72.0
CMS1_k127_4036362_6 - - - - 0.00000009246 55.0
CMS1_k127_4041129_0 Protein of unknown function, DUF255 K06888 - - 8.724e-258 812.0
CMS1_k127_4041129_1 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 383.0
CMS1_k127_4041129_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003506 256.0
CMS1_k127_4041129_3 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000002031 136.0
CMS1_k127_4041129_4 Nitroreductase - - - 0.0000000000000000000004725 95.0
CMS1_k127_4041129_5 cellulase activity K12567 - 2.7.11.1 0.00000000000000001873 95.0
CMS1_k127_4041129_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000002676 57.0
CMS1_k127_4047382_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 494.0
CMS1_k127_4047382_1 PFAM ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 321.0
CMS1_k127_4047382_10 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000004495 183.0
CMS1_k127_4047382_2 PFAM peptidase K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 319.0
CMS1_k127_4047382_3 Methylates ribosomal protein L11 K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 309.0
CMS1_k127_4047382_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 297.0
CMS1_k127_4047382_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 284.0
CMS1_k127_4047382_6 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 287.0
CMS1_k127_4047382_7 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005735 263.0
CMS1_k127_4047382_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000003442 216.0
CMS1_k127_4058830_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 1.583e-311 975.0
CMS1_k127_4058830_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 462.0
CMS1_k127_4058830_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000007935 182.0
CMS1_k127_4058830_3 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000003414 163.0
CMS1_k127_4058830_4 Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue - - - 0.0000000000000000000000000000000000001097 144.0
CMS1_k127_4058830_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000001346 145.0
CMS1_k127_4058830_6 PFAM Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000174 86.0
CMS1_k127_4065858_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.667e-216 676.0
CMS1_k127_4073940_0 PFAM AMP-dependent synthetase and ligase K00666 - - 9.11e-321 1005.0
CMS1_k127_4073940_1 Predicted ATPase of the ABC class - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 378.0
CMS1_k127_4084405_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 9.122e-249 782.0
CMS1_k127_4084405_1 Belongs to the RtcB family K14415 - 6.5.1.3 3.377e-219 690.0
CMS1_k127_4084405_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 1.192e-201 636.0
CMS1_k127_4084405_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 446.0
CMS1_k127_4084405_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 420.0
CMS1_k127_4084405_5 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000000000000003934 205.0
CMS1_k127_4084405_6 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000001445 135.0
CMS1_k127_408540_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 1.572e-256 814.0
CMS1_k127_408540_1 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 426.0
CMS1_k127_408540_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000009631 208.0
CMS1_k127_408540_3 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000005935 145.0
CMS1_k127_4096749_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000007448 200.0
CMS1_k127_4096749_1 ATP:ADP antiporter activity K15762 - - 0.00000000000000000000000000000000000000005668 162.0
CMS1_k127_4113259_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 525.0
CMS1_k127_4113259_1 Thioredoxin - - - 0.000000000000000000001314 100.0
CMS1_k127_4126415_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.125e-213 679.0
CMS1_k127_4126415_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 599.0
CMS1_k127_4126415_2 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 494.0
CMS1_k127_4126415_3 NGG1p interacting factor 3 K22391 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
CMS1_k127_4126415_4 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0
CMS1_k127_4126415_5 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000001429 136.0
CMS1_k127_4126415_6 - - - - 0.000000009094 61.0
CMS1_k127_4129825_0 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 456.0
CMS1_k127_4129825_1 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008831 248.0
CMS1_k127_4129825_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
CMS1_k127_4129825_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179,K04090 - 1.2.7.8 0.0000000000000002626 79.0
CMS1_k127_41322_0 TIGRFAM sodium ion-translocating decarboxylase, beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 589.0
CMS1_k127_41322_1 Peptidase family M20/M25/M40 K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000007729 236.0
CMS1_k127_41322_2 Oxaloacetate decarboxylase, gamma chain - - - 0.00000000000000000000000002095 115.0
CMS1_k127_4149949_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.344e-313 964.0
CMS1_k127_4149949_1 type II secretion system K02454 - - 2.169e-250 785.0
CMS1_k127_4149949_2 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009433 275.0
CMS1_k127_4149949_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000004671 167.0
CMS1_k127_4185418_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 319.0
CMS1_k127_4185418_1 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000002598 148.0
CMS1_k127_4185418_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000004559 136.0
CMS1_k127_4217488_0 Periplasmic binding protein domain K01999 - - 3.901e-215 674.0
CMS1_k127_4217488_1 PFAM sigma-54 factor interaction domain-containing protein K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 529.0
CMS1_k127_4217488_2 PFAM ATP-binding region ATPase domain protein, histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 452.0
CMS1_k127_4217488_3 AMP-binding enzyme K12508 - 6.2.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 437.0
CMS1_k127_4217488_4 CoA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 403.0
CMS1_k127_4217488_5 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000108 243.0
CMS1_k127_421782_0 PFAM TrkA-N domain K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 419.0
CMS1_k127_421782_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 349.0
CMS1_k127_421782_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000002708 168.0
CMS1_k127_4227125_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 308.0
CMS1_k127_4227125_1 PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 316.0
CMS1_k127_4227125_2 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000002569 154.0
CMS1_k127_425521_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 362.0
CMS1_k127_425521_1 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000903 221.0
CMS1_k127_425521_2 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000001138 222.0
CMS1_k127_425521_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000009294 125.0
CMS1_k127_425521_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000006955 104.0
CMS1_k127_4265092_0 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 409.0
CMS1_k127_4265092_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000002601 213.0
CMS1_k127_4265092_2 Belongs to the binding-protein-dependent transport system permease family K01989,K05832 - - 0.00000004457 54.0
CMS1_k127_4279003_0 chondroitin AC lyase activity K00694,K01210,K03292 - 2.4.1.12,3.2.1.58 0.0 1074.0
CMS1_k127_4279003_1 beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 369.0
CMS1_k127_4279003_2 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 346.0
CMS1_k127_4279003_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000002081 59.0
CMS1_k127_4279003_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00001116 54.0
CMS1_k127_428045_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 312.0
CMS1_k127_428045_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000001025 235.0
CMS1_k127_428045_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000008309 147.0
CMS1_k127_428045_3 - - - - 0.0000000000000000000000000000001553 130.0
CMS1_k127_428045_4 - - - - 0.00000000000006101 76.0
CMS1_k127_4280971_0 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 4.669e-218 695.0
CMS1_k127_4280971_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 615.0
CMS1_k127_4280971_2 acyl-coa dehydrogenase K08297 GO:0003674,GO:0003824,GO:0006066,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0016627,GO:0034308,GO:0034309,GO:0044281,GO:0044283,GO:0046165,GO:0052890,GO:0055114,GO:0071270,GO:0071271,GO:0071704,GO:1901576,GO:1901615,GO:1901617 1.3.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 582.0
CMS1_k127_4280971_3 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 474.0
CMS1_k127_4280971_4 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 459.0
CMS1_k127_4280971_5 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 422.0
CMS1_k127_4280971_6 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 400.0
CMS1_k127_4280971_7 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000000000000000001954 181.0
CMS1_k127_4280971_8 Transcriptional regulator, TetR family - - - 0.000000000000000000000000000001062 136.0
CMS1_k127_4280971_9 Universal stress protein - - - 0.00000000000000000000000000003221 122.0
CMS1_k127_428895_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 509.0
CMS1_k127_428895_1 Psort location Cytoplasmic, score K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 471.0
CMS1_k127_428895_10 Histidine kinase - - - 0.000001371 51.0
CMS1_k127_428895_2 Psort location CytoplasmicMembrane, score 10.00 K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 456.0
CMS1_k127_428895_3 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 431.0
CMS1_k127_428895_4 COG3119 Arylsulfatase A and related enzymes K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 411.0
CMS1_k127_428895_5 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 324.0
CMS1_k127_428895_6 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000105 269.0
CMS1_k127_428895_7 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005119 243.0
CMS1_k127_428895_8 ABC transporter substrate-binding protein - - - 0.000000000000000000000000000000000000000002375 168.0
CMS1_k127_428895_9 transposase Tn3 family - - - 0.0000000000000000004633 86.0
CMS1_k127_4295886_0 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 485.0
CMS1_k127_4295886_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 349.0
CMS1_k127_4295886_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 317.0
CMS1_k127_4295886_3 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 289.0
CMS1_k127_4295886_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000006728 170.0
CMS1_k127_4295886_5 Elongation factor P (EF-P) OB domain K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000008881 68.0
CMS1_k127_4310893_0 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 309.0
CMS1_k127_4310893_1 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000001389 112.0
CMS1_k127_4310893_2 general secretion pathway protein - - - 0.000000000000006783 81.0
CMS1_k127_4310893_3 type IV pilus modification protein PilV - - - 0.00000009015 61.0
CMS1_k127_4310893_4 Prokaryotic N-terminal methylation motif - - - 0.0001859 46.0
CMS1_k127_4355924_0 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 355.0
CMS1_k127_4359842_0 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 557.0
CMS1_k127_436874_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 578.0
CMS1_k127_436874_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000002312 224.0
CMS1_k127_436874_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000002796 218.0
CMS1_k127_436874_3 - - - - 0.0000000000000000000000000000000000000000000223 166.0
CMS1_k127_436874_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000004436 149.0
CMS1_k127_436874_5 PFAM FMN-binding domain - - - 0.0000000000000000009908 90.0
CMS1_k127_436874_6 - - - - 0.000000000000004226 78.0
CMS1_k127_436874_7 Domain of unknown function (DUF4304) - - - 0.000000000001793 75.0
CMS1_k127_4389035_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 451.0
CMS1_k127_4389035_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 401.0
CMS1_k127_439366_0 Domain of unknown function (DUF3390) K18929 - - 1.687e-225 708.0
CMS1_k127_439366_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009091 361.0
CMS1_k127_439366_10 GYD domain - - - 0.00000000000000000000000001813 111.0
CMS1_k127_439366_11 4Fe-4S single cluster domain K05337 - - 0.0000000000000000000000006495 104.0
CMS1_k127_439366_2 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 351.0
CMS1_k127_439366_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000171 256.0
CMS1_k127_439366_4 Pfam:DUF162 K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000009074 234.0
CMS1_k127_439366_5 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000003837 228.0
CMS1_k127_439366_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000001512 213.0
CMS1_k127_439366_7 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000002551 199.0
CMS1_k127_439366_8 PFAM NERD domain protein - - - 0.00000000000000000000000000000000000000000000001107 182.0
CMS1_k127_439366_9 small membrane protein - - - 0.00000000000000000000000000000001854 130.0
CMS1_k127_442369_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 365.0
CMS1_k127_442369_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000008859 262.0
CMS1_k127_442369_2 Histone deacetylase - - - 0.0000000000000000000000000000000000008712 140.0
CMS1_k127_4433744_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1287.0
CMS1_k127_4433744_1 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1139.0
CMS1_k127_4433744_2 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 2.456e-233 727.0
CMS1_k127_4433744_3 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 4.667e-207 655.0
CMS1_k127_4433744_4 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 505.0
CMS1_k127_4433744_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 451.0
CMS1_k127_4440567_0 ABC1 family K03688 - - 1.089e-232 732.0
CMS1_k127_4440567_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 362.0
CMS1_k127_4440567_2 PFAM MltA K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 343.0
CMS1_k127_4440567_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000004397 220.0
CMS1_k127_4440567_4 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000003701 183.0
CMS1_k127_4440567_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000001042 153.0
CMS1_k127_4440567_6 Class III cytochrome C family - - - 0.0000000000000000000000000000000000004817 145.0
CMS1_k127_4440567_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.0000000000000000000306 96.0
CMS1_k127_4463430_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 593.0
CMS1_k127_4463430_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 461.0
CMS1_k127_4463430_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000003656 244.0
CMS1_k127_4477731_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 613.0
CMS1_k127_4477731_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 354.0
CMS1_k127_4477731_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001808 269.0
CMS1_k127_4477731_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000002446 199.0
CMS1_k127_4477731_4 nitric oxide dioxygenase activity K00528,K05784 GO:0000166,GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004324,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006001,GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010035,GO:0016043,GO:0016052,GO:0016226,GO:0016491,GO:0016730,GO:0016731,GO:0019318,GO:0019320,GO:0022607,GO:0031163,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1901575,GO:1901700 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000002298 196.0
CMS1_k127_4477731_5 LysE type translocator - - - 0.0000000000000000000000000000000000000000000009033 172.0
CMS1_k127_4477731_6 Rubrerythrin - - - 0.00000000006352 68.0
CMS1_k127_4487313_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 617.0
CMS1_k127_4487313_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 503.0
CMS1_k127_4487313_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 393.0
CMS1_k127_4487313_3 COG3842 ABC-type spermidine putrescine transport systems, ATPase components K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 343.0
CMS1_k127_4487313_4 PFAM 3-dehydroquinate synthase K00096 - 1.1.1.261 0.00000000000000000000000000000000000000000000000000000003067 215.0
CMS1_k127_4487313_5 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000001137 123.0
CMS1_k127_4487313_6 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000401 121.0
CMS1_k127_4487313_7 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000009599 100.0
CMS1_k127_4489264_0 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 3.977e-212 668.0
CMS1_k127_4489264_1 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 524.0
CMS1_k127_4489264_10 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000000002882 124.0
CMS1_k127_4489264_11 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.000009877 54.0
CMS1_k127_4489264_12 - - - - 0.0006648 44.0
CMS1_k127_4489264_13 - - - - 0.0009593 44.0
CMS1_k127_4489264_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 414.0
CMS1_k127_4489264_3 TIGRFAM CitB domain protein K13795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 386.0
CMS1_k127_4489264_4 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 380.0
CMS1_k127_4489264_5 PrpF protein K09788,K16514 - 5.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 376.0
CMS1_k127_4489264_6 Malate/L-lactate dehydrogenase K00073 - 1.1.1.350 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 370.0
CMS1_k127_4489264_7 Aldolase/RraA K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000001103 230.0
CMS1_k127_4489264_8 Transition state regulatory protein AbrB K07120 - - 0.00000000000000000000000000000000000000000000678 168.0
CMS1_k127_4489264_9 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000005573 145.0
CMS1_k127_4490923_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 364.0
CMS1_k127_4490923_1 TAT (twin-arginine translocation) pathway signal sequence K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 322.0
CMS1_k127_4490923_2 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 316.0
CMS1_k127_4490923_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000004598 256.0
CMS1_k127_4490923_4 COG0500 SAM-dependent methyltransferases K17462 - - 0.000000000000000000000000000000000000000000000000000000000000001396 225.0
CMS1_k127_4490923_5 Flavodoxin domain - - - 0.00000000000000000000000000000000003053 135.0
CMS1_k127_4492489_0 AIR synthase related protein, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 589.0
CMS1_k127_4492489_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000001693 212.0
CMS1_k127_4492489_2 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000005082 193.0
CMS1_k127_4492489_3 metal cluster binding - - - 0.000000000000000000000000000000004676 135.0
CMS1_k127_4492489_4 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000001299 130.0
CMS1_k127_4492489_5 cellulase activity K12567 - 2.7.11.1 0.0000000000000001048 93.0
CMS1_k127_4494399_0 FAD linked oxidases, C-terminal domain - - - 3.916e-314 982.0
CMS1_k127_4497504_0 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 378.0
CMS1_k127_4497504_1 Amino acid kinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 377.0
CMS1_k127_4497504_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000001108 58.0
CMS1_k127_4500594_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 1.598e-267 843.0
CMS1_k127_4500594_1 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 2.467e-237 743.0
CMS1_k127_4500594_10 peptidyl-tyrosine sulfation - - - 0.000000000000004969 81.0
CMS1_k127_4500594_2 FAD binding domain K09471 - - 4.84e-214 670.0
CMS1_k127_4500594_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 551.0
CMS1_k127_4500594_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 541.0
CMS1_k127_4500594_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 402.0
CMS1_k127_4500594_6 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 372.0
CMS1_k127_4500594_7 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 360.0
CMS1_k127_4500594_8 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 268.0
CMS1_k127_4500594_9 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000001471 181.0
CMS1_k127_4503835_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 5.132e-216 677.0
CMS1_k127_4503835_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 455.0
CMS1_k127_4503835_2 - - - - 0.000000000000000000000000001307 114.0
CMS1_k127_4503835_3 Belongs to the phosphoglycerate kinase family K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.000000000000000000002938 94.0
CMS1_k127_4510931_0 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 371.0
CMS1_k127_4510931_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 329.0
CMS1_k127_4511722_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1491.0
CMS1_k127_4511722_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 452.0
CMS1_k127_4511722_2 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 406.0
CMS1_k127_4511722_3 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 373.0
CMS1_k127_4511722_4 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000003922 193.0
CMS1_k127_4511722_5 PFAM CBS domain - - - 0.0000000000000000000002508 97.0
CMS1_k127_4517845_0 Elongation factor Tu domain 2 K02355 - - 5.138e-269 837.0
CMS1_k127_4517845_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 381.0
CMS1_k127_4517845_2 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 318.0
CMS1_k127_4519827_0 TrkA-C domain - - - 5e-324 1006.0
CMS1_k127_4519827_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000003117 199.0
CMS1_k127_4522418_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.795e-208 659.0
CMS1_k127_4522418_1 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 466.0
CMS1_k127_4522418_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 352.0
CMS1_k127_4522418_3 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 346.0
CMS1_k127_4522418_4 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 321.0
CMS1_k127_4522418_5 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006289 267.0
CMS1_k127_4529209_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5.91e-278 875.0
CMS1_k127_4529209_1 TIGRFAM ammonium transporter K03320 - - 0.0000000000000001153 81.0
CMS1_k127_4532337_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 4.189e-223 698.0
CMS1_k127_4532337_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 418.0
CMS1_k127_4532337_10 - - - - 0.00000006323 55.0
CMS1_k127_4532337_2 Belongs to the ATCase OTCase family K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 409.0
CMS1_k127_4532337_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 346.0
CMS1_k127_4532337_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000136 237.0
CMS1_k127_4532337_5 nitrate reductase activity - - - 0.000000000000000000000000000000000000000000005048 171.0
CMS1_k127_4532337_6 Dihydrofolate reductase K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000006332 169.0
CMS1_k127_4532337_7 cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000004465 174.0
CMS1_k127_4532337_8 type VI secretion system effector K11903 - - 0.00000000000000000000000000002475 121.0
CMS1_k127_4532337_9 Class III cytochrome C family - - - 0.00000000000001136 79.0
CMS1_k127_4533776_0 - - - - 0.0 1371.0
CMS1_k127_4533776_1 TIGRFAM molybdate ABC transporter, inner membrane subunit K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 371.0
CMS1_k127_4533776_2 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 365.0
CMS1_k127_4533776_3 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 330.0
CMS1_k127_4533776_4 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000003274 257.0
CMS1_k127_4533776_5 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000001719 115.0
CMS1_k127_4533776_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000001252 95.0
CMS1_k127_4534241_0 Pyridine nucleotide-disulphide oxidoreductase - - - 9.146e-224 703.0
CMS1_k127_4535493_0 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000006269 216.0
CMS1_k127_4535493_1 PFAM Tetratricopeptide repeat - - - 0.00004506 51.0
CMS1_k127_4544697_0 PFAM Acetyl-CoA hydrolase transferase - - - 1.46e-294 914.0
CMS1_k127_4544697_1 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000006391 247.0
CMS1_k127_4544697_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000008213 189.0
CMS1_k127_4544697_3 cellulose binding - - - 0.000000000000000000000000000000004734 148.0
CMS1_k127_4546656_0 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 623.0
CMS1_k127_4546656_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 587.0
CMS1_k127_4546656_10 Histidine kinase K07677,K07679 - 2.7.13.3 0.000000000009902 69.0
CMS1_k127_4546656_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 435.0
CMS1_k127_4546656_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 413.0
CMS1_k127_4546656_4 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003718 261.0
CMS1_k127_4546656_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000001187 218.0
CMS1_k127_4546656_6 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000005972 150.0
CMS1_k127_4546656_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.0000000000000000000000000000000000005856 149.0
CMS1_k127_4546656_8 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000001377 128.0
CMS1_k127_4546656_9 - - - - 0.0000000000000000000003061 109.0
CMS1_k127_4547126_0 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 614.0
CMS1_k127_4547126_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 384.0
CMS1_k127_4549950_0 DEAD/H associated K03724 - - 0.0 1131.0
CMS1_k127_4549950_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000009968 198.0
CMS1_k127_4549950_2 Bacterial PH domain - - - 0.0000000000000000000000000000000005835 138.0
CMS1_k127_4554051_0 xylan catabolic process K03932 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 501.0
CMS1_k127_4554051_1 ErfK YbiS YcfS YnhG family protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 344.0
CMS1_k127_4557750_0 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 406.0
CMS1_k127_4557750_1 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 393.0
CMS1_k127_4557750_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 327.0
CMS1_k127_4557750_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000007029 222.0
CMS1_k127_4557750_4 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000001384 208.0
CMS1_k127_4557750_5 Phosphohistidine phosphatase SixA K08296 - - 0.0000000000000000000000000000000000000000000000000148 183.0
CMS1_k127_4557750_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000005847 173.0
CMS1_k127_4566186_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.0 1112.0
CMS1_k127_4566186_1 Phage late control gene D protein (GPD) K11904 - - 1.185e-223 715.0
CMS1_k127_4566186_11 cellulase activity - - - 0.000000000000000000000000000000002606 145.0
CMS1_k127_4566186_12 - - - - 0.000000000000000000000003929 108.0
CMS1_k127_4566186_2 Type VI secretion system, TssF K11896 - - 1.873e-212 674.0
CMS1_k127_4566186_3 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 445.0
CMS1_k127_4566186_4 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 393.0
CMS1_k127_4566186_5 3-oxoacyl-[acyl-carrier-protein] synthase activity K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 374.0
CMS1_k127_4566186_6 Type VI secretion, TssG K11895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002226 267.0
CMS1_k127_4566186_7 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000003604 243.0
CMS1_k127_4566186_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001922 235.0
CMS1_k127_4566186_9 chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000002286 239.0
CMS1_k127_4566668_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 5.247e-281 873.0
CMS1_k127_4566668_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 428.0
CMS1_k127_4566668_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000001005 148.0
CMS1_k127_4566668_11 Poly-gamma-glutamate hydrolase - - - 0.0000000000000000000000000000000000003205 148.0
CMS1_k127_4566668_12 - - - - 0.000000000000000000000000000000003855 138.0
CMS1_k127_4566668_13 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000005276 114.0
CMS1_k127_4566668_14 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000001609 79.0
CMS1_k127_4566668_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 384.0
CMS1_k127_4566668_3 PFAM RimK domain protein ATP-grasp K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004902 285.0
CMS1_k127_4566668_4 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004352 262.0
CMS1_k127_4566668_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000009561 258.0
CMS1_k127_4566668_6 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000000000000000000006852 176.0
CMS1_k127_4566668_7 Belongs to the peptidase S8 family K01280 - 3.4.14.10 0.0000000000000000000000000000000000000000000002599 188.0
CMS1_k127_4566668_8 PFAM HNH endonuclease K07451 - - 0.00000000000000000000000000000000000000003729 155.0
CMS1_k127_4566668_9 - - - - 0.0000000000000000000000000000000000000004272 152.0
CMS1_k127_457304_0 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007886 539.0
CMS1_k127_457304_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 548.0
CMS1_k127_457304_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 506.0
CMS1_k127_457304_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 484.0
CMS1_k127_457304_4 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 395.0
CMS1_k127_4574361_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 483.0
CMS1_k127_4574361_1 Methyltransferase small domain - - - 0.0000000000000000000004226 100.0
CMS1_k127_4574361_2 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.000000000000000001126 87.0
CMS1_k127_4575615_0 COG4644 Transposase and inactivated derivatives, TnpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 593.0
CMS1_k127_4575615_1 PFAM transposase IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000429 261.0
CMS1_k127_4575615_10 PFAM glycoside hydrolase family 13 domain protein - - - 0.00000000000000000000000000009016 124.0
CMS1_k127_4575615_11 - - - - 0.00000000000000000000001913 110.0
CMS1_k127_4575615_12 SMART Tetratricopeptide domain protein - - - 0.000000000000006439 76.0
CMS1_k127_4575615_13 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000006818 69.0
CMS1_k127_4575615_14 transposase Tn3 family - - - 0.00000000001081 65.0
CMS1_k127_4575615_15 - - - - 0.0000001654 61.0
CMS1_k127_4575615_2 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000006223 220.0
CMS1_k127_4575615_3 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000232 203.0
CMS1_k127_4575615_4 PFAM Transposase - - - 0.0000000000000000000000000000000000000000000000000001095 193.0
CMS1_k127_4575615_5 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000009872 151.0
CMS1_k127_4575615_6 PFAM WD domain, G-beta repeat - - - 0.00000000000000000000000000000000000001004 147.0
CMS1_k127_4575615_7 Tn3 transposase DDE domain - - - 0.00000000000000000000000000000000000001881 153.0
CMS1_k127_4575615_8 L COG4644 Transposase and inactivated derivatives, TnpA family - - - 0.00000000000000000000000000000000000958 139.0
CMS1_k127_4575615_9 Resolvase, N terminal domain - - - 0.00000000000000000000000000000005578 129.0
CMS1_k127_4577305_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001031 275.0
CMS1_k127_4577305_1 Pup-ligase protein K13571 GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000005739 246.0
CMS1_k127_4577305_2 Pup-ligase protein K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119 0.0000000000000000000000000000000000000000000000000000000000003496 221.0
CMS1_k127_4577305_3 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000000000000000006359 201.0
CMS1_k127_4577305_4 Psort location Cytoplasmic, score - - - 0.0000007491 59.0
CMS1_k127_4579469_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 435.0
CMS1_k127_4579469_1 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 304.0
CMS1_k127_4579469_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004855 264.0
CMS1_k127_4579469_3 dienelactone hydrolase - - - 0.000000000000000000000005537 103.0
CMS1_k127_4584065_0 helicase K07464,K10844 - 3.1.12.1,3.6.4.12 1.466e-220 709.0
CMS1_k127_4584065_1 Participates in initiation and elongation during chromosome replication K02314,K02316,K17680 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 614.0
CMS1_k127_4584065_10 PFAM thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000000000001745 168.0
CMS1_k127_4584065_11 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000638 155.0
CMS1_k127_4584065_12 PAS fold - - - 0.0000000000000000000000000000000009811 150.0
CMS1_k127_4584065_13 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000006673 124.0
CMS1_k127_4584065_14 DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0000000000000000000000000005488 113.0
CMS1_k127_4584065_15 - - - - 0.0000000000000000000000001099 108.0
CMS1_k127_4584065_16 Regulatory protein, FmdB - - - 0.000000000000000004907 84.0
CMS1_k127_4584065_17 - - - - 0.000002125 55.0
CMS1_k127_4584065_2 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 551.0
CMS1_k127_4584065_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 512.0
CMS1_k127_4584065_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 425.0
CMS1_k127_4584065_5 PFAM response regulator receiver K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 317.0
CMS1_k127_4584065_6 helix_turn_helix, Lux Regulon K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 300.0
CMS1_k127_4584065_7 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001257 285.0
CMS1_k127_4584065_8 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002309 239.0
CMS1_k127_4584065_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005327 256.0
CMS1_k127_4589820_0 Glutamine amido-transferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001346 266.0
CMS1_k127_4589820_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002928 252.0
CMS1_k127_4589820_2 hmm pf00753 K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000002041 180.0
CMS1_k127_4592054_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 4.463e-243 761.0
CMS1_k127_4592054_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000001013 52.0
CMS1_k127_4598875_0 His Kinase A (phosphoacceptor) domain K10819 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 433.0
CMS1_k127_4598875_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 325.0
CMS1_k127_4598875_2 response regulator, receiver - - - 0.0000000000000000000000000000000000000126 147.0
CMS1_k127_4604672_0 Sodium:solute symporter family K03307 - - 1.309e-262 822.0
CMS1_k127_4604672_1 EXOIII - - - 0.000000000000000000000000000000000000000000000000006 199.0
CMS1_k127_4604672_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 - 6.2.1.1,6.2.1.17 0.000000000000002111 76.0
CMS1_k127_461444_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 5.832e-196 623.0
CMS1_k127_461444_1 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 471.0
CMS1_k127_461444_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 474.0
CMS1_k127_461444_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 366.0
CMS1_k127_461444_4 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 343.0
CMS1_k127_461444_5 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 326.0
CMS1_k127_461444_6 formate dehydrogenase K00127 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 330.0
CMS1_k127_461444_7 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000001915 214.0
CMS1_k127_461444_8 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000005443 173.0
CMS1_k127_461444_9 Prokaryotic cytochrome b561 - - - 0.0000000000000000007795 98.0
CMS1_k127_4616121_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1461.0
CMS1_k127_4616121_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 462.0
CMS1_k127_4616121_2 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 356.0
CMS1_k127_4616121_3 - - - - 0.00000000000000000000000000000001848 127.0
CMS1_k127_4616121_4 PFAM Outer membrane efflux protein - - - 0.00000000000000000002059 98.0
CMS1_k127_4616121_5 B12 binding domain K00548 - 2.1.1.13 0.000000001739 63.0
CMS1_k127_4637062_0 response regulator receiver K02481 - - 7.14e-218 683.0
CMS1_k127_4637062_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 559.0
CMS1_k127_4637062_2 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 402.0
CMS1_k127_4637062_3 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000009135 241.0
CMS1_k127_4637062_4 SH3 domain - - - 0.0000000000000000000000000000000000000000004249 162.0
CMS1_k127_4637062_5 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000008244 121.0
CMS1_k127_4637062_6 regulatory protein, FmdB family - - - 0.000000000000000000000001135 105.0
CMS1_k127_4641753_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 4.64e-314 966.0
CMS1_k127_4641753_1 RNA-metabolising metallo-beta-lactamase K07576 - - 7.571e-230 724.0
CMS1_k127_4641753_10 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000226 146.0
CMS1_k127_4641753_11 Belongs to the UPF0102 family K07460 - - 0.000000000000000001961 92.0
CMS1_k127_4641753_12 Domain of unknown function (DUF4445) - - - 0.000000000002031 69.0
CMS1_k127_4641753_13 bacterial (prokaryotic) histone like domain K04764 - - 0.00000000001428 73.0
CMS1_k127_4641753_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 520.0
CMS1_k127_4641753_3 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 468.0
CMS1_k127_4641753_4 PFAM conserved K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 405.0
CMS1_k127_4641753_5 TIGRFAM cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 379.0
CMS1_k127_4641753_6 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 351.0
CMS1_k127_4641753_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 298.0
CMS1_k127_4641753_8 Necessary for formate dehydrogenase activity K02380 - - 0.00000000000000000000000000000000000000000000000009644 188.0
CMS1_k127_4641753_9 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.000000000000000000000000000000000000000003864 162.0
CMS1_k127_464215_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 564.0
CMS1_k127_464215_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 517.0
CMS1_k127_464215_10 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000000000000000000000008691 196.0
CMS1_k127_464215_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000005091 147.0
CMS1_k127_464215_12 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000252 154.0
CMS1_k127_464215_13 PFAM Abortive infection protein K07052 - - 0.00000000000000000000000000000000004976 144.0
CMS1_k127_464215_14 Belongs to the 'phage' integrase family - - - 0.0000000000000000007119 88.0
CMS1_k127_464215_15 Transposase K07491 - - 0.0000000005585 68.0
CMS1_k127_464215_16 deoxyhypusine monooxygenase activity - - - 0.00009176 48.0
CMS1_k127_464215_17 Transposase IS200 like - - - 0.0002798 45.0
CMS1_k127_464215_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 433.0
CMS1_k127_464215_3 Phage integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 336.0
CMS1_k127_464215_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 288.0
CMS1_k127_464215_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003439 286.0
CMS1_k127_464215_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000005075 250.0
CMS1_k127_464215_7 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000001995 241.0
CMS1_k127_464215_8 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000008573 213.0
CMS1_k127_464215_9 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000005961 220.0
CMS1_k127_4646294_0 - - - - 0.00000000000000000000000000000000000000000000000000000002024 208.0
CMS1_k127_4646294_1 Phospholipase D Transphosphatidylase K06132 - - 0.0000000000000000000000000001101 119.0
CMS1_k127_4646294_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000001234 109.0
CMS1_k127_4646294_3 Phospholipase D. Active site motifs. K06132 - - 0.000001129 53.0
CMS1_k127_4648329_0 PFAM Radical SAM - - - 1.372e-201 638.0
CMS1_k127_4648329_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003298 253.0
CMS1_k127_4648848_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000259 241.0
CMS1_k127_4648848_1 ABC transporter K06857 - 3.6.3.55 0.0000000000000000000000000000000001673 139.0
CMS1_k127_4648848_2 3-demethylubiquinone-9 3-O-methyltransferase activity K06219 - - 0.00000000000000000000000000000001099 138.0
CMS1_k127_4649471_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1050.0
CMS1_k127_4649471_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000004783 162.0
CMS1_k127_4653176_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 562.0
CMS1_k127_4653176_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 526.0
CMS1_k127_4653176_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 450.0
CMS1_k127_4653176_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 288.0
CMS1_k127_4653176_4 ABC transporter K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002633 271.0
CMS1_k127_4655673_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 3.87e-258 804.0
CMS1_k127_4655673_1 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000000000000241 163.0
CMS1_k127_4655673_2 cysteine protease - - - 0.0000000000000000006598 89.0
CMS1_k127_4655673_3 zinc metalloprotease whose natural substrate is K06974 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 - 0.00001985 54.0
CMS1_k127_4660807_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1131.0
CMS1_k127_4660807_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 473.0
CMS1_k127_4660807_10 4Fe-4S binding domain K00171 - 1.2.7.1 0.0000000000000000000000000002957 117.0
CMS1_k127_4660807_11 - - - - 0.0000000000000000000000009893 107.0
CMS1_k127_4660807_12 SMART Chromosomal replication initiator DnaA domain - - - 0.0000000000001643 72.0
CMS1_k127_4660807_13 - - - - 0.000000000001839 70.0
CMS1_k127_4660807_14 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.00000004626 58.0
CMS1_k127_4660807_2 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 450.0
CMS1_k127_4660807_3 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 435.0
CMS1_k127_4660807_4 amino acid K01999,K11954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 364.0
CMS1_k127_4660807_5 L-malate dehydrogenase activity K00016,K00024 - 1.1.1.27,1.1.1.37 0.00000000000000000000000000000000000000000000000000003867 199.0
CMS1_k127_4660807_6 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000005688 183.0
CMS1_k127_4660807_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124,K07307 - - 0.00000000000000000000000000000000000000000000004693 173.0
CMS1_k127_4660807_8 Regulatory protein GntR HTH - - - 0.0000000000000000000000000000000000000002395 158.0
CMS1_k127_4660807_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000008704 147.0
CMS1_k127_4664568_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 549.0
CMS1_k127_4664568_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 454.0
CMS1_k127_4664568_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000005679 221.0
CMS1_k127_4664568_3 Belongs to the complex I 75 kDa subunit family K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000009227 188.0
CMS1_k127_4664568_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000006363 173.0
CMS1_k127_4664568_5 NADH-quinone oxidoreductase K00334 - 1.6.5.3 0.00000000000000000000000000000000000000001261 162.0
CMS1_k127_4664568_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000001702 136.0
CMS1_k127_4664568_7 TIR domain - - - 0.000000005303 58.0
CMS1_k127_4666123_0 DEAD DEAH box helicase K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 537.0
CMS1_k127_4667611_0 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000001954 112.0
CMS1_k127_4667611_1 helix_turn_helix, Lux Regulon - - - 0.000000006444 66.0
CMS1_k127_4670654_0 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 1.149e-269 843.0
CMS1_k127_4670654_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 590.0
CMS1_k127_4670654_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 511.0
CMS1_k127_4670654_3 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 493.0
CMS1_k127_4670654_4 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 301.0
CMS1_k127_4670654_5 - - - - 0.00000000000000000000000000000000000000000001307 169.0
CMS1_k127_4670654_6 - - - - 0.0000000000000000000000000000000006042 136.0
CMS1_k127_4673946_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2262.0
CMS1_k127_4673946_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000001326 241.0
CMS1_k127_4673946_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000001295 233.0
CMS1_k127_4673946_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000106 76.0
CMS1_k127_4676764_0 trimethylamine methyltransferase K14083 - 2.1.1.250 2.316e-222 699.0
CMS1_k127_4676764_1 Trimethylamine methyltransferase K14083 - 2.1.1.250 1.751e-219 690.0
CMS1_k127_4676764_2 methyltransferase activity K00574,K04786,K07478,K09846,K12240,K13613,K15256,K15677,K18534,K19620,K20421,K20444,K21377 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.1.1.210,2.1.1.295,2.1.1.302,2.1.1.303,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 580.0
CMS1_k127_4676764_3 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 284.0
CMS1_k127_4676764_4 PFAM dihydropteroate synthase DHPS K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000002188 270.0
CMS1_k127_4676764_5 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000002272 209.0
CMS1_k127_4676764_6 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.000000000000000000000000000000000007616 145.0
CMS1_k127_4676764_7 Heavy-metal-associated domain - - - 0.00000000000005562 72.0
CMS1_k127_4683560_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0 1598.0
CMS1_k127_4683560_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 349.0
CMS1_k127_4690952_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 1.733e-211 684.0
CMS1_k127_4690952_1 CoA binding domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 604.0
CMS1_k127_4690952_2 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 349.0
CMS1_k127_4690952_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 320.0
CMS1_k127_4690952_4 - - - - 0.0000000000000000000000000000000000000000000000000007443 190.0
CMS1_k127_4690952_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000005291 126.0
CMS1_k127_4690952_6 - - - - 0.000000000001562 70.0
CMS1_k127_4701635_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 456.0
CMS1_k127_4701635_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 330.0
CMS1_k127_4701635_2 Sigma-54 interaction domain K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001439 273.0
CMS1_k127_4703300_0 Voltage gated chloride channel K03281 - - 2.736e-297 921.0
CMS1_k127_4703300_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 1.142e-196 621.0
CMS1_k127_4703300_10 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 291.0
CMS1_k127_4703300_11 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006644 265.0
CMS1_k127_4703300_12 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000003059 190.0
CMS1_k127_4703300_13 - - - - 0.00000000000000000000000000000000000004428 145.0
CMS1_k127_4703300_14 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000001491 135.0
CMS1_k127_4703300_15 PFAM Ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 0.000000000001784 69.0
CMS1_k127_4703300_16 - - - - 0.0000000006843 67.0
CMS1_k127_4703300_2 PFAM aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 587.0
CMS1_k127_4703300_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 458.0
CMS1_k127_4703300_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 450.0
CMS1_k127_4703300_5 Periplasmic binding protein K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 433.0
CMS1_k127_4703300_6 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 384.0
CMS1_k127_4703300_7 PFAM Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 363.0
CMS1_k127_4703300_8 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 335.0
CMS1_k127_4703300_9 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 333.0
CMS1_k127_4705470_0 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000003267 133.0
CMS1_k127_4705470_2 Thioesterase superfamily - - - 0.000000000001661 74.0
CMS1_k127_4705470_4 COG3328 Transposase and inactivated derivatives - - - 0.0002547 45.0
CMS1_k127_4705800_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000003695 225.0
CMS1_k127_4705800_1 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000001787 179.0
CMS1_k127_4705800_2 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000001982 158.0
CMS1_k127_4710245_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 607.0
CMS1_k127_4710245_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 455.0
CMS1_k127_4710245_10 TRL-like protein family - - - 0.000000003551 61.0
CMS1_k127_4710245_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 411.0
CMS1_k127_4710245_3 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 383.0
CMS1_k127_4710245_4 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 323.0
CMS1_k127_4710245_5 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 312.0
CMS1_k127_4710245_6 PFAM Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000001306 265.0
CMS1_k127_4710245_7 PFAM Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000007268 249.0
CMS1_k127_4710245_8 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001335 252.0
CMS1_k127_4710245_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000009756 84.0
CMS1_k127_4711076_0 Domain of unknown function (DUF3536) - - - 8.292e-297 931.0
CMS1_k127_4711076_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 5.961e-269 856.0
CMS1_k127_4711076_10 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000001096 230.0
CMS1_k127_4711076_11 PFAM Glycoside hydrolase, family 13 - - - 0.00000000000000000000000000002475 120.0
CMS1_k127_4711076_12 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000004852 119.0
CMS1_k127_4711076_13 AMP binding K06149 - - 0.000000000000000000000000001854 117.0
CMS1_k127_4711076_14 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000275 98.0
CMS1_k127_4711076_15 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000009382 94.0
CMS1_k127_4711076_16 Response regulator, receiver - - - 0.0000000000000000002346 93.0
CMS1_k127_4711076_17 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000003234 83.0
CMS1_k127_4711076_19 response regulator K07720 - - 0.0000000002483 68.0
CMS1_k127_4711076_2 Domain of unknown function (DUF3459) K00700,K01236 - 2.4.1.18,3.2.1.141 1.26e-228 732.0
CMS1_k127_4711076_21 - - - - 0.0000003954 53.0
CMS1_k127_4711076_3 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 567.0
CMS1_k127_4711076_4 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009634 541.0
CMS1_k127_4711076_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 505.0
CMS1_k127_4711076_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008194,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 457.0
CMS1_k127_4711076_7 PFAM FAD linked oxidase domain protein K00803 - 2.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 438.0
CMS1_k127_4711076_8 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 374.0
CMS1_k127_4711076_9 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 361.0
CMS1_k127_4713605_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.761e-197 632.0
CMS1_k127_4715493_0 protein kinase activity - - - 0.0 1023.0
CMS1_k127_4715493_1 SpoVR like protein K06415 - - 1.909e-256 800.0
CMS1_k127_4715493_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 445.0
CMS1_k127_4715493_3 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000003133 219.0
CMS1_k127_4715493_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000001289 136.0
CMS1_k127_4715493_5 Protein of unknown function (DUF2845) - - - 0.00001192 52.0
CMS1_k127_4720120_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.745e-221 693.0
CMS1_k127_4720120_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 290.0
CMS1_k127_4720120_10 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000007784 151.0
CMS1_k127_4720120_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000008587 142.0
CMS1_k127_4720120_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000124 136.0
CMS1_k127_4720120_13 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000577 113.0
CMS1_k127_4720120_14 Ribosomal protein L30p/L7e K02907 - - 0.0000000000000000000006009 96.0
CMS1_k127_4720120_15 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000005168 80.0
CMS1_k127_4720120_16 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000001056 72.0
CMS1_k127_4720120_17 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000005705 70.0
CMS1_k127_4720120_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
CMS1_k127_4720120_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001872 248.0
CMS1_k127_4720120_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000004806 233.0
CMS1_k127_4720120_5 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000006843 221.0
CMS1_k127_4720120_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000005201 217.0
CMS1_k127_4720120_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001045 192.0
CMS1_k127_4720120_8 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000459 171.0
CMS1_k127_4720120_9 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000001054 159.0
CMS1_k127_4726497_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.612e-224 701.0
CMS1_k127_4726497_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009567 583.0
CMS1_k127_4726497_2 D-tagatose-bisphosphate aldolase, class II K16371 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 365.0
CMS1_k127_4726497_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000001321 171.0
CMS1_k127_4726497_4 Dienelactone hydrolase - - - 0.00000000000000000000000000008331 121.0
CMS1_k127_4726497_5 - - - - 0.0000000000000007812 83.0
CMS1_k127_4726497_6 Na H antiporter - - - 0.00001459 53.0
CMS1_k127_4728446_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 366.0
CMS1_k127_4728446_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000005079 150.0
CMS1_k127_4728446_2 Protein of unknown function (DUF933) K06942 - - 0.0000000000000000001444 88.0
CMS1_k127_4729882_0 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 516.0
CMS1_k127_4729882_1 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 434.0
CMS1_k127_4729882_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000493 259.0
CMS1_k127_4729882_3 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000001082 128.0
CMS1_k127_4735057_0 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 378.0
CMS1_k127_4735057_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000181 234.0
CMS1_k127_4735057_2 - - - - 0.000000000000000000004102 96.0
CMS1_k127_4737013_0 PFAM response regulator receiver K02481,K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 564.0
CMS1_k127_4737013_1 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007209 319.0
CMS1_k127_4737116_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1052.0
CMS1_k127_4737116_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0 1050.0
CMS1_k127_4737116_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.168e-282 875.0
CMS1_k127_4737116_3 PFAM Acetyl-CoA hydrolase transferase - - - 6.533e-259 811.0
CMS1_k127_4737116_4 radical SAM domain protein K22318 - - 1.306e-197 635.0
CMS1_k127_4737116_5 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 377.0
CMS1_k127_4737116_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 339.0
CMS1_k127_4737116_7 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 320.0
CMS1_k127_4741716_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 445.0
CMS1_k127_4741716_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 411.0
CMS1_k127_4741716_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.00000000000000000002905 93.0
CMS1_k127_4754903_0 Aminotransferase class-V K00281,K00283 - 1.4.4.2 9.964e-235 737.0
CMS1_k127_4754903_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 494.0
CMS1_k127_4760139_0 ImcF-related N-terminal domain K11891 - - 0.0 1112.0
CMS1_k127_4760139_1 Type VI secretion system protein DotU K11892 - - 0.000000000000000000000000000000000000000000000000000000000000000000001333 242.0
CMS1_k127_4762985_0 Thermophilic metalloprotease (M29) K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 524.0
CMS1_k127_4762985_1 Alpha/beta hydrolase family K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000006643 243.0
CMS1_k127_4762985_2 - - - - 0.00000000000000000000000005787 111.0
CMS1_k127_4762985_3 cheY-homologous receiver domain - - - 0.00000006157 55.0
CMS1_k127_4763690_0 PFAM Protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 323.0
CMS1_k127_4763690_1 - - - - 0.000000000000000000000000000000000003406 154.0
CMS1_k127_4763690_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000002732 138.0
CMS1_k127_4763690_3 Protein involved in outer membrane biogenesis - - - 0.000002287 57.0
CMS1_k127_4764858_0 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 495.0
CMS1_k127_4764858_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 447.0
CMS1_k127_4764858_2 Glycosyltransferase family 28 N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 301.0
CMS1_k127_4764858_3 amino acid - - - 0.00000000000000000000000000000000000000000000001414 179.0
CMS1_k127_4770783_0 Type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 352.0
CMS1_k127_4770783_1 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 295.0
CMS1_k127_4770783_2 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000000000000000000000000000000000003554 178.0
CMS1_k127_4770783_3 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.00000000002448 68.0
CMS1_k127_4777901_0 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 339.0
CMS1_k127_4777901_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002911 215.0
CMS1_k127_4777901_2 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000001922 193.0
CMS1_k127_4777901_3 acetyltransferase K06977 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000006192 196.0
CMS1_k127_4777901_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000001041 123.0
CMS1_k127_4777901_5 SEC-C motif - - - 0.0000000000000000000000000007615 115.0
CMS1_k127_4777901_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000006363 112.0
CMS1_k127_4777901_7 Antibiotic biosynthesis monooxygenase - - - 0.000001674 49.0
CMS1_k127_4796836_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 501.0
CMS1_k127_4796836_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000001633 251.0
CMS1_k127_4796836_2 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000001436 160.0
CMS1_k127_4800321_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.473e-212 670.0
CMS1_k127_4800321_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 447.0
CMS1_k127_4800321_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000001224 171.0
CMS1_k127_4800321_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000000000000000000000000000000000564 165.0
CMS1_k127_4800321_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000293 157.0
CMS1_k127_4800321_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000002691 160.0
CMS1_k127_4800321_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000003505 144.0
CMS1_k127_4809051_0 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001832 237.0
CMS1_k127_4809051_1 Elongation factor P (EF-P) OB domain K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000003001 236.0
CMS1_k127_4819378_0 RNA binding S1 domain protein K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 484.0
CMS1_k127_4819378_1 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 390.0
CMS1_k127_4819378_2 Cytochrome C biogenesis protein K06196,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000009283 209.0
CMS1_k127_4819378_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000005562 152.0
CMS1_k127_4819378_4 - - - - 0.0000000000000000000000000000000004621 148.0
CMS1_k127_4819378_5 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000002313 137.0
CMS1_k127_4819378_6 AsmA-like C-terminal region - - - 0.00000000000000000000000000000007951 145.0
CMS1_k127_482632_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.098e-257 801.0
CMS1_k127_482632_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 475.0
CMS1_k127_482632_10 flagellar basal-body rod protein FlgG K02392 - - 0.00000000000003507 72.0
CMS1_k127_482632_11 FlgN protein - - - 0.000000001108 66.0
CMS1_k127_482632_12 flagellar basal-body rod protein FlgG K02392 - - 0.00000005125 57.0
CMS1_k127_482632_13 - - - - 0.0000004377 61.0
CMS1_k127_482632_2 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 437.0
CMS1_k127_482632_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 342.0
CMS1_k127_482632_4 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 324.0
CMS1_k127_482632_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 314.0
CMS1_k127_482632_6 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000006346 256.0
CMS1_k127_482632_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000123 250.0
CMS1_k127_482632_8 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000002714 234.0
CMS1_k127_482632_9 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000002885 214.0
CMS1_k127_4830029_0 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 389.0
CMS1_k127_4830029_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 356.0
CMS1_k127_4830029_3 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000000001032 159.0
CMS1_k127_483142_0 Anthranilate synthase component I domain protein K01665 - 2.6.1.85 7.949e-261 823.0
CMS1_k127_483142_1 S-adenosylmethionine-dependent methyltransferase K06969,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.191,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 458.0
CMS1_k127_483142_2 Guanylyl transferase CofC like K09931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001792 284.0
CMS1_k127_483142_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001458 271.0
CMS1_k127_483142_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006763 261.0
CMS1_k127_483142_5 PFAM heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001402 237.0
CMS1_k127_483142_6 - - - - 0.00000000000000000000000000000000000000006706 154.0
CMS1_k127_483142_7 Peptidase family M1 domain - - - 0.000000000000004717 78.0
CMS1_k127_4833253_0 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000004446 174.0
CMS1_k127_4833253_1 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000009689 103.0
CMS1_k127_4833494_0 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 411.0
CMS1_k127_4833494_1 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006235 265.0
CMS1_k127_4833494_2 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000004564 212.0
CMS1_k127_4834494_0 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 383.0
CMS1_k127_4834494_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001894 274.0
CMS1_k127_4834963_0 PFAM Radical SAM domain protein K22226 - - 5.628e-223 694.0
CMS1_k127_4834963_1 Belongs to the ClpX chaperone family - - - 1.089e-212 676.0
CMS1_k127_4834963_2 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 558.0
CMS1_k127_4834963_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 541.0
CMS1_k127_4834963_4 Flavin reductase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003359 274.0
CMS1_k127_4835530_0 Exporters of the RND superfamily K07003 - - 4.436e-316 987.0
CMS1_k127_4835530_1 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 610.0
CMS1_k127_4835530_2 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 535.0
CMS1_k127_4835530_3 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 539.0
CMS1_k127_4835530_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 323.0
CMS1_k127_4835530_5 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006069 284.0
CMS1_k127_4835530_6 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000007271 225.0
CMS1_k127_4835530_7 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.00000000000000000000000019 108.0
CMS1_k127_4848236_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 475.0
CMS1_k127_4848236_1 formate dehydrogenase (NAD+) activity K00123,K00336 - 1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000001154 228.0
CMS1_k127_4848236_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 0.00000000000000000000000231 103.0
CMS1_k127_4848236_3 PFAM Cyclic nucleotide-binding domain - - - 0.000000000000000000008315 98.0
CMS1_k127_4848236_4 Protein of unknown function (DUF1641) - - - 0.00002997 47.0
CMS1_k127_4860932_0 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 6.5e-283 875.0
CMS1_k127_4860932_1 LAO AO transport system K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 419.0
CMS1_k127_4860932_2 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 0.00000000000000000000000000000000000006257 142.0
CMS1_k127_4868284_0 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 369.0
CMS1_k127_4868284_1 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001918 236.0
CMS1_k127_4868284_2 Lysin motif - - - 0.0000000001455 62.0
CMS1_k127_4873210_0 long-chain fatty acid transport protein - - - 0.0 1674.0
CMS1_k127_4873210_1 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008893 274.0
CMS1_k127_4873210_2 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000000596 175.0
CMS1_k127_4873210_3 TIGRFAM conserved repeat domain - - - 0.00000000000000000000000000001503 124.0
CMS1_k127_4873210_4 FecR protein - - - 0.0000000000000002039 89.0
CMS1_k127_4873210_5 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.00000001584 60.0
CMS1_k127_4880448_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 8.864e-212 662.0
CMS1_k127_4880448_1 Chemotaxis sensory transducer K03406,K13487 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 493.0
CMS1_k127_4880448_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 342.0
CMS1_k127_4880448_3 protein deglycation K03152,K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000004228 224.0
CMS1_k127_4880448_4 MaoC like domain K17865 - 4.2.1.55 0.00000000000000000000000000000000000000000000000001484 183.0
CMS1_k127_4880448_5 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000003308 121.0
CMS1_k127_4880448_6 - - - - 0.0000000000000000001601 91.0
CMS1_k127_4880448_7 Transcriptional regulator, LysR - - - 0.0000000000000000005004 89.0
CMS1_k127_4887990_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.143e-264 830.0
CMS1_k127_4887990_1 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 311.0
CMS1_k127_4887990_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
CMS1_k127_4887990_3 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001255 228.0
CMS1_k127_4887990_4 4Fe-4S dicluster domain K07307 - - 0.0000000000000000000000000000000002515 137.0
CMS1_k127_4887990_5 CoA binding domain - - - 0.00000000000000000000000000000233 124.0
CMS1_k127_4887990_6 beta-lactamase activity K01058,K07502 - 3.1.1.32,3.1.1.4 0.000000000000001269 83.0
CMS1_k127_4900567_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.28e-295 920.0
CMS1_k127_4900781_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.3e-207 665.0
CMS1_k127_4900781_1 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 597.0
CMS1_k127_4900781_2 PFAM Iron-containing alcohol dehydrogenase K19714 - 1.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 520.0
CMS1_k127_4900781_3 PFAM penicillin-binding protein transpeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 471.0
CMS1_k127_4900781_4 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000004374 66.0
CMS1_k127_4905362_0 Na H antiporter - - - 1.122e-268 839.0
CMS1_k127_4905362_1 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000001422 173.0
CMS1_k127_4905362_2 Transglycosylase SLT domain - - - 0.00000000003562 71.0
CMS1_k127_4914964_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1256.0
CMS1_k127_4914964_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 470.0
CMS1_k127_4914964_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 293.0
CMS1_k127_4914964_3 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002196 244.0
CMS1_k127_4914964_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000004954 117.0
CMS1_k127_4914964_5 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000003106 103.0
CMS1_k127_4936872_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 598.0
CMS1_k127_4936872_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 488.0
CMS1_k127_4936872_2 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 290.0
CMS1_k127_4936872_3 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.00000000000000000007601 89.0
CMS1_k127_4936872_4 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000000004177 84.0
CMS1_k127_4937740_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 586.0
CMS1_k127_4937740_1 type VI secretion protein K11895 - - 0.00000000000000000000002582 105.0
CMS1_k127_4948969_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 327.0
CMS1_k127_4948969_1 PFAM MOSC domain containing protein - - - 0.00000000000000000000000000000002863 126.0
CMS1_k127_4948969_2 Caspase domain - - - 0.0004827 43.0
CMS1_k127_4952428_0 hydrogenase large subunit K05922,K06281 - 1.12.5.1,1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 463.0
CMS1_k127_4952428_1 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000003678 270.0
CMS1_k127_4952428_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000005734 138.0
CMS1_k127_4952428_3 - - - - 0.00000000000000000000002394 105.0
CMS1_k127_4952428_4 hydrogenase maturation protease K03605 - - 0.0000000000000007727 84.0
CMS1_k127_4952428_5 Transposase IS200 like K07491 - - 0.000000000000001889 79.0
CMS1_k127_4952428_6 Redoxin - - - 0.00000000000002181 77.0
CMS1_k127_4967683_0 Flavodoxin - - - 5.937e-197 619.0
CMS1_k127_4967683_1 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 372.0
CMS1_k127_4967683_2 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 331.0
CMS1_k127_4967683_3 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002827 271.0
CMS1_k127_4967683_4 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000004164 206.0
CMS1_k127_4967683_5 Rubredoxin - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000845 106.0
CMS1_k127_4967683_6 4Fe-4S single cluster domain K05337 - - 0.00000000000000000004112 91.0
CMS1_k127_4968934_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016153,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.2.1.49 0.0 1031.0
CMS1_k127_4968934_1 histidine utilization repressor K05836 - - 0.00000000000000000000000000000000000000000000000000001556 194.0
CMS1_k127_4977200_0 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 344.0
CMS1_k127_4977200_2 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 0.00000000000000000000002266 101.0
CMS1_k127_4977200_3 - - - - 0.0000000000000001152 85.0
CMS1_k127_4998904_0 Histidine kinase - - - 1.556e-199 639.0
CMS1_k127_4998904_1 amino acid K03294 - - 0.000000000001132 72.0
CMS1_k127_5023861_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 7.103e-231 752.0
CMS1_k127_5023861_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 285.0
CMS1_k127_5024646_0 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 355.0
CMS1_k127_5024646_1 histone acetyltransferase binding - - - 0.00000000000000000000000000000000000000000000001918 185.0
CMS1_k127_5024646_2 - - - - 0.0005621 42.0
CMS1_k127_50263_0 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 544.0
CMS1_k127_50263_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 415.0
CMS1_k127_50263_10 - - - - 0.000000000000000000000005348 103.0
CMS1_k127_50263_11 Alpha beta hydrolase K00433,K01055 - 1.11.1.10,3.1.1.24 0.0000000000000000000005981 105.0
CMS1_k127_50263_12 PFAM histidine triad (HIT) protein K02503 - - 0.000000000000000000001603 97.0
CMS1_k127_50263_13 PFAM Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000001398 103.0
CMS1_k127_50263_14 HAMP domain K07651 - 2.7.13.3 0.00001163 54.0
CMS1_k127_50263_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 367.0
CMS1_k127_50263_3 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 321.0
CMS1_k127_50263_4 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009733 243.0
CMS1_k127_50263_5 Protein of unknown function (DUF2959) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009285 234.0
CMS1_k127_50263_6 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000001718 215.0
CMS1_k127_50263_7 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000000000000000003036 173.0
CMS1_k127_50263_8 MlaD protein - - - 0.0000000000000000000000000001231 123.0
CMS1_k127_50263_9 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000001987 115.0
CMS1_k127_5026447_0 PFAM major facilitator superfamily MFS_1 K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 420.0
CMS1_k127_5026447_1 RDD family - - - 0.0000000000000000001232 93.0
CMS1_k127_5026447_3 Transposase K07483 - - 0.00000005396 57.0
CMS1_k127_5051138_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 300.0
CMS1_k127_5051138_1 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000009272 177.0
CMS1_k127_5051138_2 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000005917 63.0
CMS1_k127_5051138_3 helical bimodular (HBM) domain K03406 - - 0.0000008507 51.0
CMS1_k127_5051138_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0001178 46.0
CMS1_k127_5054693_0 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 468.0
CMS1_k127_5054693_1 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000001686 166.0
CMS1_k127_5056231_0 PFAM Acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 444.0
CMS1_k127_5056231_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 363.0
CMS1_k127_5056231_2 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.0000000000000000000000000000000000000000000000000000000005333 204.0
CMS1_k127_5056231_3 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000004251 194.0
CMS1_k127_5076320_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.008e-211 661.0
CMS1_k127_5076320_1 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 316.0
CMS1_k127_5076320_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004604 271.0
CMS1_k127_5084124_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 528.0
CMS1_k127_5084124_1 Calcineurin-like phosphoesterase - - - 0.0000005079 55.0
CMS1_k127_5084124_2 Alpha/beta hydrolase family - - - 0.00001094 49.0
CMS1_k127_5100492_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 541.0
CMS1_k127_51055_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1290.0
CMS1_k127_51055_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 495.0
CMS1_k127_51055_10 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001958 231.0
CMS1_k127_51055_11 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000004325 204.0
CMS1_k127_51055_12 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000003717 211.0
CMS1_k127_51055_13 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000009144 173.0
CMS1_k127_51055_14 GYD domain - - - 0.00000000000000000000000000000000000000009654 152.0
CMS1_k127_51055_15 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000001382 126.0
CMS1_k127_51055_16 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000008252 120.0
CMS1_k127_51055_17 Nicotinamidase K08281 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.1.19 0.0000000000000000000000000006725 114.0
CMS1_k127_51055_18 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000005533 109.0
CMS1_k127_51055_19 Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB K07677 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0033554,GO:0035556,GO:0036211,GO:0042710,GO:0043170,GO:0043412,GO:0044010,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0065007,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0104004,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000006558 88.0
CMS1_k127_51055_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 491.0
CMS1_k127_51055_20 DNA invertase Pin homologs - - - 0.0000000000000004687 80.0
CMS1_k127_51055_21 Belongs to the UPF0109 family K06960 - - 0.00000000000000222 81.0
CMS1_k127_51055_22 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000001034 74.0
CMS1_k127_51055_23 Transposase zinc-ribbon domain - - - 0.00000000006944 66.0
CMS1_k127_51055_25 Belongs to the 'phage' integrase family - - - 0.000000008755 60.0
CMS1_k127_51055_27 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0003092 49.0
CMS1_k127_51055_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 452.0
CMS1_k127_51055_4 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 409.0
CMS1_k127_51055_5 COG COG0846 NAD-dependent protein deacetylases, SIR2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 364.0
CMS1_k127_51055_6 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 351.0
CMS1_k127_51055_7 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006408 280.0
CMS1_k127_51055_8 Transposase Tn3 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004165 296.0
CMS1_k127_51055_9 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002082 273.0
CMS1_k127_5108000_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 1.647e-210 661.0
CMS1_k127_5108000_1 AAA domain - - - 0.00000000000000000000000000000000000000000000003456 176.0
CMS1_k127_5108000_2 Sh3 type 3 domain protein K01448 - 3.5.1.28 0.000006211 52.0
CMS1_k127_511308_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 3.062e-310 961.0
CMS1_k127_511308_1 PAS domain K10125 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 466.0
CMS1_k127_5119396_0 Major Facilitator Superfamily K08224 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 353.0
CMS1_k127_5119396_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002384 257.0
CMS1_k127_5119396_2 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000004231 254.0
CMS1_k127_5119396_3 AhpC/TSA family - - - 0.000000000000000000000000000007594 121.0
CMS1_k127_5122507_0 Putative transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 439.0
CMS1_k127_5122507_1 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005228 276.0
CMS1_k127_5122507_2 Belongs to the 'phage' integrase family - - - 0.000000000001281 69.0
CMS1_k127_5130425_0 Pfam:TPM K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
CMS1_k127_5130425_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006113 269.0
CMS1_k127_5130425_2 - - - - 0.00000000000000000000000000000000000000000000000003261 183.0
CMS1_k127_5130425_3 TPM domain K08988 - - 0.00000000000000000000000000000001828 130.0
CMS1_k127_5130425_4 PFAM Rhodanese domain protein - - - 0.00000000000000001591 89.0
CMS1_k127_513796_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 610.0
CMS1_k127_513796_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 486.0
CMS1_k127_513796_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001478 274.0
CMS1_k127_513796_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001149 231.0
CMS1_k127_513796_4 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000001139 189.0
CMS1_k127_513796_5 COG1643 HrpA-like helicases K03578 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000008277 136.0
CMS1_k127_513796_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000004175 131.0
CMS1_k127_5141325_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007827 280.0
CMS1_k127_5141325_1 PFAM Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000002665 210.0
CMS1_k127_5141325_2 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000001094 160.0
CMS1_k127_5141325_3 - - - - 0.00000000000000000000000000000000000000001577 155.0
CMS1_k127_5141325_4 - - - - 0.00000000000000000000000008011 109.0
CMS1_k127_5141325_5 Rubrerythrin K19824 - - 0.00000000000000000002488 91.0
CMS1_k127_5141325_6 - - - - 0.00000000000000000006045 94.0
CMS1_k127_5170137_0 TIGRFAM thiamine biosynthesis protein ThiC K22466 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.23 1.644e-217 684.0
CMS1_k127_5170137_1 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000001165 235.0
CMS1_k127_5170137_2 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000001033 201.0
CMS1_k127_5170137_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000002697 169.0
CMS1_k127_5170137_4 Protein of unknown function (DUF3106) - - - 0.00001698 53.0
CMS1_k127_5171271_0 transport system, permease and ATPase K02471 - - 4.776e-213 679.0
CMS1_k127_5171271_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 589.0
CMS1_k127_5171271_2 Belongs to the methyltransferase superfamily K06969,K12297 - 2.1.1.173,2.1.1.191,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 457.0
CMS1_k127_5171271_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 366.0
CMS1_k127_5171271_4 Acts as a magnesium transporter K06213 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 302.0
CMS1_k127_5171271_5 Belongs to the UPF0597 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 281.0
CMS1_k127_5171271_6 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000004952 189.0
CMS1_k127_5171271_7 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000002783 151.0
CMS1_k127_5171271_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000004284 84.0
CMS1_k127_5182419_0 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 400.0
CMS1_k127_5182419_2 PFAM YebG family protein K09918 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010165,GO:0010212,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.00002848 47.0
CMS1_k127_5185397_0 PFAM Citrate transporter - - - 1.259e-220 708.0
CMS1_k127_5185397_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 8.732e-194 617.0
CMS1_k127_5185984_0 Transglycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 456.0
CMS1_k127_5185984_1 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 428.0
CMS1_k127_5185984_2 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 374.0
CMS1_k127_5185984_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005205 289.0
CMS1_k127_5185984_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate - - - 0.000000000000000000000000000000000000000000000000000000525 200.0
CMS1_k127_5185984_5 - - - - 0.0000000000000000000000000000000000000000003752 169.0
CMS1_k127_5188451_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847 - 5.4.99.2 0.0 1157.0
CMS1_k127_5188451_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000008778 98.0
CMS1_k127_5191321_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 290.0
CMS1_k127_5191321_1 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006569 279.0
CMS1_k127_5191321_2 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000134 268.0
CMS1_k127_5191321_3 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000005382 218.0
CMS1_k127_5191321_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000004483 181.0
CMS1_k127_5191321_5 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000001105 96.0
CMS1_k127_5201636_0 PFAM TrkA-N domain K03499 - - 3.843e-201 634.0
CMS1_k127_5201636_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 497.0
CMS1_k127_5201636_2 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 375.0
CMS1_k127_5201636_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 315.0
CMS1_k127_5209355_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 631.0
CMS1_k127_5209355_1 Isoleucine patch superfamily - - - 0.0000000000000000000000008447 106.0
CMS1_k127_5209355_2 Forkhead associated domain - - - 0.000000000000000002354 89.0
CMS1_k127_5209355_3 methyltransferase activity - - - 0.00002569 47.0
CMS1_k127_5217835_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.209e-197 625.0
CMS1_k127_5217835_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 529.0
CMS1_k127_5217835_2 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 504.0
CMS1_k127_5217835_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 421.0
CMS1_k127_5217835_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 385.0
CMS1_k127_5217835_5 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000815 228.0
CMS1_k127_5217835_6 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000002493 221.0
CMS1_k127_5217835_7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 0.00000000000000000000000000001149 137.0
CMS1_k127_5217835_8 PFAM DsrE family protein - - - 0.00000000000000000000000000003697 120.0
CMS1_k127_5217835_9 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000005528 68.0
CMS1_k127_5227083_0 Major Facilitator Superfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 484.0
CMS1_k127_5227083_1 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 428.0
CMS1_k127_5227083_2 Belongs to the binding-protein-dependent transport system permease family K01989,K05832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 407.0
CMS1_k127_5227083_3 PFAM ABC transporter related K05833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 362.0
CMS1_k127_5227083_4 PFAM Dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 289.0
CMS1_k127_5227083_5 PAS fold - - - 0.00000000000000000000000000000000000000003929 166.0
CMS1_k127_5227083_6 Major Facilitator Superfamily K03446 - - 0.00000000000000001019 86.0
CMS1_k127_5227203_0 COG1884 Methylmalonyl-CoA mutase, N-terminal domain subunit K01848 - 5.4.99.2 1.405e-239 753.0
CMS1_k127_5227203_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 455.0
CMS1_k127_5227203_10 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.0000000000000000000000000000000000000000002485 172.0
CMS1_k127_5227203_11 cobalamin binding K01849,K11942 - 5.4.99.13,5.4.99.2 0.00000000000000000000000000000000000000000026 162.0
CMS1_k127_5227203_12 Bacterial transcription activator, effector binding domain - - - 0.0000000000000000000000000000000000000001866 162.0
CMS1_k127_5227203_13 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000001302 107.0
CMS1_k127_5227203_14 response regulator, receiver K00384,K03413 - 1.8.1.9 0.0000000000000000000004936 101.0
CMS1_k127_5227203_15 MMPL family K07003 - - 0.000000000000000000005429 93.0
CMS1_k127_5227203_16 Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000001849 81.0
CMS1_k127_5227203_17 cheY-homologous receiver domain - - - 0.000000000002993 67.0
CMS1_k127_5227203_18 Psort location Cytoplasmic, score - - - 0.000000001309 62.0
CMS1_k127_5227203_19 Belongs to the 'phage' integrase family K14059 - - 0.000004319 50.0
CMS1_k127_5227203_2 CoA-transferase activity K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 421.0
CMS1_k127_5227203_20 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0001411 45.0
CMS1_k127_5227203_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 377.0
CMS1_k127_5227203_4 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 367.0
CMS1_k127_5227203_5 Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 351.0
CMS1_k127_5227203_6 PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 343.0
CMS1_k127_5227203_7 homocitrate synthase activity K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 323.0
CMS1_k127_5227203_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 297.0
CMS1_k127_5227203_9 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000001219 168.0
CMS1_k127_5250338_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 471.0
CMS1_k127_5250338_1 Predicted membrane protein (DUF2318) - - - 0.0000000000000000000000000000000000000000000000000000007271 198.0
CMS1_k127_5250338_2 alginic acid biosynthetic process - - - 0.000000000000000001844 89.0
CMS1_k127_5263457_0 PFAM nucleoside H symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 383.0
CMS1_k127_5263457_1 Uncharacterised protein family (UPF0259) - - - 0.000000000000000000000000000006822 128.0
CMS1_k127_5263457_2 OmpA family - - - 0.000000000018 65.0
CMS1_k127_5333399_0 Na H antiporter K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 555.0
CMS1_k127_5333399_1 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000001748 124.0
CMS1_k127_5333399_2 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000492 129.0
CMS1_k127_5349_0 Putative Fe-S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 611.0
CMS1_k127_5349_1 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 347.0
CMS1_k127_5349_2 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005769 267.0
CMS1_k127_5349_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000193 179.0
CMS1_k127_53728_0 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008361 252.0
CMS1_k127_53728_1 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000004639 204.0
CMS1_k127_53728_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000002644 177.0
CMS1_k127_53728_3 LysE type translocator - - - 0.0000000000000000000000000000000000002964 143.0
CMS1_k127_53728_4 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.00000000000005954 71.0
CMS1_k127_53728_5 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.0000000000006563 70.0
CMS1_k127_53728_6 Acetyltransferase (GNAT) domain - - - 0.0002323 46.0
CMS1_k127_5387215_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.753e-232 728.0
CMS1_k127_5387215_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 430.0
CMS1_k127_5387215_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 374.0
CMS1_k127_5387215_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 314.0
CMS1_k127_5387215_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000527 288.0
CMS1_k127_5387215_5 Mitochondrial fission ELM1 K07276 - - 0.000000000000000000000000000000007231 139.0
CMS1_k127_5387215_6 Glycosyl transferases group 1 - - - 0.00000000000000000005727 93.0
CMS1_k127_5387215_7 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000007657 83.0
CMS1_k127_5393778_0 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 322.0
CMS1_k127_5393778_1 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 318.0
CMS1_k127_5393778_3 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003998 269.0
CMS1_k127_5393778_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007817 267.0
CMS1_k127_5393778_5 UbiE COQ5 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002069 259.0
CMS1_k127_5393778_6 YHS domain protein - - - 0.0000000000000000000000000000000000001588 149.0
CMS1_k127_5393778_7 - - - - 0.000000000000000000000000000000002128 131.0
CMS1_k127_5393778_8 - - - - 0.00000000000000000000005742 103.0
CMS1_k127_5393778_9 Mechanosensitive ion channel K16053 - - 0.00004851 50.0
CMS1_k127_5394038_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 585.0
CMS1_k127_5394038_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 507.0
CMS1_k127_5394038_2 Rhomboid family K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 394.0
CMS1_k127_5394038_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 321.0
CMS1_k127_5394038_4 - - - - 0.000000000000000000000000000000000000000000003744 168.0
CMS1_k127_5403075_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 2.115e-208 661.0
CMS1_k127_5403075_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 496.0
CMS1_k127_5403075_2 formate C-acetyltransferase glycine radical - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001434 284.0
CMS1_k127_5403075_3 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000001399 220.0
CMS1_k127_5405940_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 541.0
CMS1_k127_5405940_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 494.0
CMS1_k127_5405940_10 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000008339 176.0
CMS1_k127_5405940_11 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000004069 163.0
CMS1_k127_5405940_12 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000001842 126.0
CMS1_k127_5405940_13 - - - - 0.000000000000000000000000271 108.0
CMS1_k127_5405940_14 NmrA-like family - - - 0.0000000000741 73.0
CMS1_k127_5405940_15 His Kinase A (phosphoacceptor) domain - - - 0.0008945 50.0
CMS1_k127_5405940_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 350.0
CMS1_k127_5405940_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 328.0
CMS1_k127_5405940_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 316.0
CMS1_k127_5405940_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001595 234.0
CMS1_k127_5405940_6 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000000000000004787 218.0
CMS1_k127_5405940_7 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000002069 204.0
CMS1_k127_5405940_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001692 192.0
CMS1_k127_5405940_9 ADP-glyceromanno-heptose 6-epimerase activity K00754,K08678,K13613 - 4.1.1.35 0.000000000000000000000000000000000000000000002153 181.0
CMS1_k127_5409967_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.089e-236 746.0
CMS1_k127_5410385_0 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 378.0
CMS1_k127_5410385_1 sulfur carrier activity K00362,K00366,K00381,K00392 - 1.7.1.15,1.7.7.1,1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000009557 225.0
CMS1_k127_5410385_2 Protein of unknown function (DUF429) - - - 0.000000000000001429 81.0
CMS1_k127_5410385_3 NADPH-dependent FMN reductase - - - 0.0000003431 52.0
CMS1_k127_5412858_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0 1058.0
CMS1_k127_5412858_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1031.0
CMS1_k127_5412858_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 456.0
CMS1_k127_5412858_3 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008459 438.0
CMS1_k127_5412858_4 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.00000000000000000000000000000000000000000000000000000000001547 213.0
CMS1_k127_5412858_5 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000001413 188.0
CMS1_k127_5412858_6 amidohydrolase - - - 0.0000000000000001727 79.0
CMS1_k127_5413549_0 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 301.0
CMS1_k127_5413549_1 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000008391 141.0
CMS1_k127_5413549_2 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000009735 98.0
CMS1_k127_5417400_0 ABC transporter K06020 - 3.6.3.25 2.296e-219 683.0
CMS1_k127_5417400_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 456.0
CMS1_k127_5417400_10 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.0000000000000000000000000001738 119.0
CMS1_k127_5417400_11 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000007025 116.0
CMS1_k127_5417400_13 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.000000000000008522 78.0
CMS1_k127_5417400_14 - - - - 0.000000000002662 68.0
CMS1_k127_5417400_15 Sh3 type 3 domain protein K01448 - 3.5.1.28 0.0006569 51.0
CMS1_k127_5417400_2 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 328.0
CMS1_k127_5417400_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007717 286.0
CMS1_k127_5417400_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007885 277.0
CMS1_k127_5417400_5 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007597 251.0
CMS1_k127_5417400_6 Carbohydrate-binding family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007817 250.0
CMS1_k127_5417400_7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000001031 204.0
CMS1_k127_5417400_8 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000000000000000000004083 152.0
CMS1_k127_5417400_9 TPM domain - - - 0.00000000000000000000000000000000000007652 150.0
CMS1_k127_5417587_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1298.0
CMS1_k127_5417587_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 1.053e-244 760.0
CMS1_k127_5417587_2 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 522.0
CMS1_k127_5417587_3 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000001938 64.0
CMS1_k127_5419125_0 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 524.0
CMS1_k127_5419125_1 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 454.0
CMS1_k127_5419125_10 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.00000000000000000000000000000000000000003729 155.0
CMS1_k127_5419125_11 Methyltransferase type 11 - - - 0.0000000000000000000001135 106.0
CMS1_k127_5419125_12 TIGRFAM ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC K16012 - - 0.000000000000000007816 85.0
CMS1_k127_5419125_2 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 421.0
CMS1_k127_5419125_3 Homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 404.0
CMS1_k127_5419125_4 Pyridoxal-phosphate dependent enzyme K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 395.0
CMS1_k127_5419125_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 304.0
CMS1_k127_5419125_6 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 293.0
CMS1_k127_5419125_7 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002783 273.0
CMS1_k127_5419125_8 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004639 252.0
CMS1_k127_5419125_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000001467 209.0
CMS1_k127_5419501_0 BadF BadG BcrA BcrD - - - 0.0 1395.0
CMS1_k127_5419501_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 4.153e-283 883.0
CMS1_k127_5419501_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 566.0
CMS1_k127_5419501_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 503.0
CMS1_k127_5419501_4 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002795 263.0
CMS1_k127_5419501_5 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000001239 180.0
CMS1_k127_5419501_6 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000225 139.0
CMS1_k127_5433525_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 434.0
CMS1_k127_5433525_1 Type IV secretion-system coupling protein DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000005288 205.0
CMS1_k127_5433525_2 CGGC - - - 0.00000000000000000000000000000000000000000000000000000829 195.0
CMS1_k127_5433525_3 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000006798 176.0
CMS1_k127_5443144_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 579.0
CMS1_k127_5443144_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 531.0
CMS1_k127_5443144_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 381.0
CMS1_k127_5443144_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 402.0
CMS1_k127_5443144_4 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 290.0
CMS1_k127_5443144_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000287 268.0
CMS1_k127_5443144_6 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000004456 235.0
CMS1_k127_5443144_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000232 224.0
CMS1_k127_5443144_8 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000004953 140.0
CMS1_k127_5443144_9 regulatory protein, FmdB family - - - 0.000000000000000000001751 97.0
CMS1_k127_5444103_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 432.0
CMS1_k127_5444103_1 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 309.0
CMS1_k127_5444103_10 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000000003681 85.0
CMS1_k127_5444103_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
CMS1_k127_5444103_3 Belongs to the ABC transporter superfamily K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005865 276.0
CMS1_k127_5444103_4 PFAM extracellular solute-binding protein, family 5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007448 282.0
CMS1_k127_5444103_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000126 259.0
CMS1_k127_5444103_6 Prokaryotic glutathione synthetase, N-terminal domain K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000118 254.0
CMS1_k127_5444103_7 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000004671 253.0
CMS1_k127_5444103_8 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 242.0
CMS1_k127_5444103_9 cyclic nucleotide-binding - - - 0.0000000000000000000000000000004964 142.0
CMS1_k127_5444852_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1486.0
CMS1_k127_5444852_1 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 4.953e-261 805.0
CMS1_k127_5444852_2 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 3.599e-219 698.0
CMS1_k127_5444852_3 ABC transporter transmembrane region K06147,K18889 - - 1.152e-201 643.0
CMS1_k127_5444852_4 ABC transporter transmembrane region K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 530.0
CMS1_k127_5444852_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 496.0
CMS1_k127_5444852_6 Bacterial extracellular solute-binding proteins, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 342.0
CMS1_k127_5444852_7 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 288.0
CMS1_k127_5444852_8 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000003148 147.0
CMS1_k127_5444852_9 Putative zinc ribbon domain - - - 0.00000000000000000000000000002113 118.0
CMS1_k127_5451269_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1037.0
CMS1_k127_5451269_1 response regulator receiver K02481,K07713 - - 1.607e-200 635.0
CMS1_k127_5451269_10 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000005362 222.0
CMS1_k127_5451269_11 AAA domain, putative AbiEii toxin, Type IV TA system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000001103 216.0
CMS1_k127_5451269_12 Cytochrome b/b6/petB K00412 - - 0.00000000000000000000000000000000000000000000000001126 193.0
CMS1_k127_5451269_13 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.000000000000000000000000000000000000000000000001168 179.0
CMS1_k127_5451269_14 CcmB protein K02194 - - 0.0000000000000000000000000000000000000000000001873 176.0
CMS1_k127_5451269_15 Thioredoxin-like K02199,K03671 - - 0.000000000000000000000000000000000000000006227 160.0
CMS1_k127_5451269_16 - - - - 0.0000000000000000000000000001096 118.0
CMS1_k127_5451269_17 E1-E2 ATPase K17686 - 3.6.3.54 0.00000000000000000000000000891 115.0
CMS1_k127_5451269_18 - - - - 0.000000000000000000000001449 106.0
CMS1_k127_5451269_19 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02034 - - 0.00000000000000000000818 94.0
CMS1_k127_5451269_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 611.0
CMS1_k127_5451269_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000125 96.0
CMS1_k127_5451269_21 Thioredoxin-like - - - 0.00000000000000000001391 94.0
CMS1_k127_5451269_22 subunit of a heme lyase K02200 - - 0.0000000000000000005635 93.0
CMS1_k127_5451269_23 - - - - 0.00000000000003222 78.0
CMS1_k127_5451269_24 E1-E2 ATPase K17686 - 3.6.3.54 0.00000000004587 73.0
CMS1_k127_5451269_25 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000134 59.0
CMS1_k127_5451269_26 mercury ion transmembrane transporter activity K07213 - - 0.0000004618 53.0
CMS1_k127_5451269_28 Thiol-disulfide oxidoreductase - - - 0.0000007985 54.0
CMS1_k127_5451269_29 - - - - 0.000404 47.0
CMS1_k127_5451269_3 PFAM Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 611.0
CMS1_k127_5451269_4 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 327.0
CMS1_k127_5451269_5 Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 287.0
CMS1_k127_5451269_6 LssY C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002232 254.0
CMS1_k127_5451269_7 Cytochrome c biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000004514 239.0
CMS1_k127_5451269_8 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000299 233.0
CMS1_k127_5451269_9 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000003991 220.0
CMS1_k127_5454399_0 Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 416.0
CMS1_k127_5454399_1 Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 401.0
CMS1_k127_5454399_2 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000478 214.0
CMS1_k127_5456188_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 562.0
CMS1_k127_5456188_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 336.0
CMS1_k127_5456188_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 313.0
CMS1_k127_5456188_3 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000001695 213.0
CMS1_k127_5456188_4 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000001798 168.0
CMS1_k127_5456188_5 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000001182 138.0
CMS1_k127_5456188_6 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.00000000000000000000000000000001414 132.0
CMS1_k127_5457036_0 pfam abc K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 413.0
CMS1_k127_5457036_1 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 340.0
CMS1_k127_5457036_2 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 316.0
CMS1_k127_5457473_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 484.0
CMS1_k127_5457473_1 sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 340.0
CMS1_k127_5457473_2 sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002749 254.0
CMS1_k127_5457473_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000005353 223.0
CMS1_k127_5457473_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000005218 155.0
CMS1_k127_5457473_5 Glycoside-hydrolase family GH114 - - - 0.000000000317 64.0
CMS1_k127_5457473_6 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.000000463 61.0
CMS1_k127_5457473_7 IMG reference gene - - - 0.00006179 45.0
CMS1_k127_5457473_8 peptidyl-tyrosine sulfation - - - 0.0004124 52.0
CMS1_k127_5459397_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 512.0
CMS1_k127_5459397_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000007553 238.0
CMS1_k127_5459397_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000009379 218.0
CMS1_k127_5459397_3 NosL - - - 0.000000000000000000000000000000000000000000000000000008623 194.0
CMS1_k127_5459397_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000003206 151.0
CMS1_k127_5459397_5 NosL - - - 0.00000000000000000000000000000004141 129.0
CMS1_k127_5459397_6 YtkA-like - - - 0.000000001376 64.0
CMS1_k127_546080_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1064.0
CMS1_k127_546080_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 438.0
CMS1_k127_546080_2 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 313.0
CMS1_k127_546080_3 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 303.0
CMS1_k127_546080_4 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000006577 220.0
CMS1_k127_546080_5 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000005535 171.0
CMS1_k127_546080_6 energy transducer activity K03646,K03832 - - 0.0000000000000000000000000000000000000000000006363 177.0
CMS1_k127_5468814_0 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 311.0
CMS1_k127_5468814_1 Thioredoxin - - - 0.00000000000000000000000000000000000000664 150.0
CMS1_k127_5471592_0 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 1.604e-196 625.0
CMS1_k127_5471592_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 585.0
CMS1_k127_5471592_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000001496 142.0
CMS1_k127_5474172_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 466.0
CMS1_k127_5474172_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000004319 74.0
CMS1_k127_5474172_3 Domain of unknown function (DUF4124) - - - 0.0007884 49.0
CMS1_k127_5494273_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1274.0
CMS1_k127_5494273_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.511e-218 691.0
CMS1_k127_5494273_10 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 286.0
CMS1_k127_5494273_11 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000268 188.0
CMS1_k127_5494273_12 PFAM phosphotransferase KptA Tpt1 K07559 - - 0.000000000000000000000000000000000000000000000007693 181.0
CMS1_k127_5494273_13 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000004654 141.0
CMS1_k127_5494273_14 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000002141 133.0
CMS1_k127_5494273_15 PFAM ATP synthase I chain - - - 0.000000000000000000000000000000001485 133.0
CMS1_k127_5494273_16 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000172 120.0
CMS1_k127_5494273_17 PFAM Cold-shock K03704 - - 0.0000000000000000000000000001444 115.0
CMS1_k127_5494273_18 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000000000000004804 94.0
CMS1_k127_5494273_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 3.607e-195 617.0
CMS1_k127_5494273_3 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 601.0
CMS1_k127_5494273_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 488.0
CMS1_k127_5494273_5 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 412.0
CMS1_k127_5494273_6 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 376.0
CMS1_k127_5494273_7 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 336.0
CMS1_k127_5494273_8 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 332.0
CMS1_k127_5494273_9 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 298.0
CMS1_k127_5496780_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 5.653e-201 653.0
CMS1_k127_5496780_1 PFAM Acetyl-CoA hydrolase transferase - - - 0.00000000000000001782 84.0
CMS1_k127_5496780_2 Belongs to the 'phage' integrase family K04763 - - 0.00000001807 57.0
CMS1_k127_54983_0 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 588.0
CMS1_k127_54983_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 549.0
CMS1_k127_54983_2 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 325.0
CMS1_k127_54983_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 294.0
CMS1_k127_54983_4 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000001722 224.0
CMS1_k127_54983_5 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000007741 65.0
CMS1_k127_54983_6 - - - - 0.0000001012 56.0
CMS1_k127_5502993_0 phosphorelay signal transduction system K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 344.0
CMS1_k127_5502993_1 PAS fold K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000004108 247.0
CMS1_k127_5502993_2 PFAM response regulator receiver - - - 0.000000000000001727 90.0
CMS1_k127_5508817_0 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 541.0
CMS1_k127_5508817_1 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 300.0
CMS1_k127_5508817_2 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003763 288.0
CMS1_k127_5508817_3 Alpha/beta hydrolase family K01048 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000005298 192.0
CMS1_k127_5508817_4 Peptidase C39 family K06992 - - 0.0000000000000000000000000004019 117.0
CMS1_k127_5508817_5 ubiE/COQ5 methyltransferase family - - - 0.000001744 60.0
CMS1_k127_5509607_0 AcrB/AcrD/AcrF family - - - 0.0 1203.0
CMS1_k127_5509607_1 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 4.958e-207 649.0
CMS1_k127_5509607_10 Belongs to the arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000004664 179.0
CMS1_k127_5509607_11 Histidine kinase - - - 0.000000000000000000000000000000000000004011 151.0
CMS1_k127_5509607_12 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 - 2.7.13.3 0.00000000000000000000000000000000005764 151.0
CMS1_k127_5509607_13 7TMR-DISM extracellular 2 - GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0032879,GO:0042710,GO:0044010,GO:0044464,GO:0044764,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051270,GO:0051271,GO:0051704,GO:0052621,GO:0065007,GO:0071944,GO:0090605,GO:0090609 - 0.00000000000000000000000000005727 132.0
CMS1_k127_5509607_14 NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000003105 117.0
CMS1_k127_5509607_15 HD domain - - - 0.000000000000000000007383 99.0
CMS1_k127_5509607_16 Biotin-lipoyl like - - - 0.0000000000000000007473 98.0
CMS1_k127_5509607_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000004603 88.0
CMS1_k127_5509607_19 - - - - 0.0000000000000006703 86.0
CMS1_k127_5509607_2 Glycosyl hydrolase family 70 K01176 - 3.2.1.1 1.155e-199 632.0
CMS1_k127_5509607_20 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000855 74.0
CMS1_k127_5509607_21 Protein of unknown function (DUF1295) - - - 0.0000000000001501 78.0
CMS1_k127_5509607_22 Histidine kinase K19616 - 2.7.13.3 0.000000000005692 70.0
CMS1_k127_5509607_23 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000001023 69.0
CMS1_k127_5509607_25 - - - - 0.000001211 56.0
CMS1_k127_5509607_3 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 407.0
CMS1_k127_5509607_4 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 409.0
CMS1_k127_5509607_6 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 297.0
CMS1_k127_5509607_7 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002628 267.0
CMS1_k127_5509607_8 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001348 266.0
CMS1_k127_5509607_9 Shikimate kinase K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000007257 226.0
CMS1_k127_5510715_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1378.0
CMS1_k127_5510715_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 9.055e-234 727.0
CMS1_k127_5510715_10 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 376.0
CMS1_k127_5510715_11 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 359.0
CMS1_k127_5510715_12 PFAM Nucleoside recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 362.0
CMS1_k127_5510715_13 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 355.0
CMS1_k127_5510715_14 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 340.0
CMS1_k127_5510715_15 TIGRFAM Nitrogenase cofactor biosynthesis protein NifB K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 321.0
CMS1_k127_5510715_16 Histidine kinase K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 323.0
CMS1_k127_5510715_17 TIGRFAM precorrin-2 C20-methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003591 281.0
CMS1_k127_5510715_18 PFAM ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002237 272.0
CMS1_k127_5510715_19 PFAM Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000001044 256.0
CMS1_k127_5510715_2 4Fe-4S dicluster domain - - - 6.489e-231 721.0
CMS1_k127_5510715_20 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000001391 242.0
CMS1_k127_5510715_21 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000383 218.0
CMS1_k127_5510715_22 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 - 2.1.1.132 0.0000000000000000000000000000000000000000000000000000889 192.0
CMS1_k127_5510715_23 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000001242 169.0
CMS1_k127_5510715_25 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000225 156.0
CMS1_k127_5510715_26 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000165 149.0
CMS1_k127_5510715_27 - - - - 0.00000000000000000000000004073 114.0
CMS1_k127_5510715_29 Belongs to the HesB IscA family - - - 0.00001734 49.0
CMS1_k127_5510715_3 Elongation factor Tu GTP binding domain K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 589.0
CMS1_k127_5510715_4 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 572.0
CMS1_k127_5510715_5 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 493.0
CMS1_k127_5510715_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 441.0
CMS1_k127_5510715_7 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 415.0
CMS1_k127_5510715_8 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016852,GO:0020037,GO:0022607,GO:0042597,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050897,GO:0051259,GO:0051262,GO:0051266,GO:0065003,GO:0071840,GO:0097159,GO:1901363 4.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 379.0
CMS1_k127_5510715_9 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 378.0
CMS1_k127_5522359_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1182.0
CMS1_k127_5522359_1 Acetyl-CoA hydrolase transferase N-terminal domain - - - 5.018e-224 708.0
CMS1_k127_5522359_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 319.0
CMS1_k127_5522359_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 297.0
CMS1_k127_5522359_4 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 258.0
CMS1_k127_5522359_5 - - - - 0.0000001708 56.0
CMS1_k127_5522359_6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00005047 47.0
CMS1_k127_5526920_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 478.0
CMS1_k127_5526920_1 OsmC-like protein - - - 0.0000000000000000000000000000002196 130.0
CMS1_k127_5526920_2 ABC transporter - - - 0.0000000001679 74.0
CMS1_k127_5527010_0 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 531.0
CMS1_k127_5527010_1 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 407.0
CMS1_k127_5527010_2 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000002032 186.0
CMS1_k127_5531568_0 Conserved region in glutamate synthase - - - 7.954e-234 728.0
CMS1_k127_5531568_1 Conserved region in glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 581.0
CMS1_k127_5531568_2 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 489.0
CMS1_k127_5531568_3 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 362.0
CMS1_k127_5531568_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000007703 111.0
CMS1_k127_5533118_0 PFAM Radical SAM - - - 6.857e-223 705.0
CMS1_k127_5533118_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.347e-212 665.0
CMS1_k127_5533118_10 Essential cell division protein K03589 - - 0.00000000000000000000000000000000000000000000007161 179.0
CMS1_k127_5533118_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 2.84e-208 656.0
CMS1_k127_5533118_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 535.0
CMS1_k127_5533118_4 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 453.0
CMS1_k127_5533118_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 427.0
CMS1_k127_5533118_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 348.0
CMS1_k127_5533118_7 NADPH-dependent FMN reductase K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 291.0
CMS1_k127_5533118_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000007679 261.0
CMS1_k127_5533118_9 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000001328 250.0
CMS1_k127_5536957_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.788e-242 764.0
CMS1_k127_5536957_1 Acyl-CoA synthetase AMP-acid ligase K01895 - 6.2.1.1 3.278e-219 693.0
CMS1_k127_5536957_10 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000000000000000000001306 191.0
CMS1_k127_5536957_11 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000479 182.0
CMS1_k127_5536957_12 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000882 169.0
CMS1_k127_5536957_13 Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000001335 164.0
CMS1_k127_5536957_14 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000003163 179.0
CMS1_k127_5536957_15 acetyltransferase - - - 0.000000000000000000000000000000000001276 144.0
CMS1_k127_5536957_16 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.00000000000000000000000000002963 123.0
CMS1_k127_5536957_17 Protein of unknown function (DUF2721) - - - 0.000000000000000000000007733 106.0
CMS1_k127_5536957_18 nucleic-acid-binding protein containing a Zn-ribbon - - - 0.000000000000000000004047 99.0
CMS1_k127_5536957_19 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.0000000000000000000376 96.0
CMS1_k127_5536957_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 490.0
CMS1_k127_5536957_20 Ethylbenzene dehydrogenase - - - 0.00000000000000000005042 105.0
CMS1_k127_5536957_22 - - - - 0.00000001782 63.0
CMS1_k127_5536957_3 PFAM Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 417.0
CMS1_k127_5536957_4 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 406.0
CMS1_k127_5536957_5 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 347.0
CMS1_k127_5536957_6 Cytochrome b(N-terminal)/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 290.0
CMS1_k127_5536957_7 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 297.0
CMS1_k127_5536957_8 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000004234 233.0
CMS1_k127_5536957_9 MaoC like domain K17865 - 4.2.1.55 0.00000000000000000000000000000000000000000000000000000000001324 209.0
CMS1_k127_5545740_0 Von Willebrand factor type A K02448 - - 3.479e-210 684.0
CMS1_k127_5545740_1 TIGRFAM TraB family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 518.0
CMS1_k127_5545740_2 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 417.0
CMS1_k127_5545740_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001711 266.0
CMS1_k127_5545740_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000004891 120.0
CMS1_k127_5545740_6 PFAM ATP-binding region ATPase domain protein - - - 0.00000002236 61.0
CMS1_k127_555004_0 Sigma-54 interaction domain K11384 - - 3.623e-213 670.0
CMS1_k127_555004_1 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 377.0
CMS1_k127_555004_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K11383 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 375.0
CMS1_k127_555004_3 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 338.0
CMS1_k127_5550533_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 3.311e-202 639.0
CMS1_k127_5550533_1 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 356.0
CMS1_k127_5550533_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 309.0
CMS1_k127_5550533_3 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005464 241.0
CMS1_k127_5550533_4 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000000000002195 210.0
CMS1_k127_5550533_5 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000000000000000000000006874 183.0
CMS1_k127_5550533_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.00000000000008145 72.0
CMS1_k127_555582_0 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 361.0
CMS1_k127_555582_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00205 - - 0.00000000002788 70.0
CMS1_k127_5557745_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 521.0
CMS1_k127_5557745_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 329.0
CMS1_k127_5557745_10 - - - - 0.000000000000004844 76.0
CMS1_k127_5557745_2 epimerase dehydratase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 325.0
CMS1_k127_5557745_3 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 300.0
CMS1_k127_5557745_4 PFAM Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001407 239.0
CMS1_k127_5557745_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000182 228.0
CMS1_k127_5557745_6 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001418 219.0
CMS1_k127_5557745_7 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000000000000000000000000000002811 198.0
CMS1_k127_5557745_8 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000000000000000002344 172.0
CMS1_k127_5557745_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000005474 126.0
CMS1_k127_5559473_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1319.0
CMS1_k127_5560547_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 5.248e-225 698.0
CMS1_k127_5560547_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 357.0
CMS1_k127_5560547_2 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005956 269.0
CMS1_k127_5560547_3 Ferric uptake regulator family K09825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002795 263.0
CMS1_k127_5560547_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000003354 137.0
CMS1_k127_5560547_5 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000001425 108.0
CMS1_k127_5563277_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1626.0
CMS1_k127_5563277_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 424.0
CMS1_k127_5563277_2 Transcriptional regulatory protein, C terminal K07664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000059 270.0
CMS1_k127_5563277_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000004942 117.0
CMS1_k127_5563277_4 EF-hand domain pair - - - 0.000000000000000000001806 103.0
CMS1_k127_5563277_5 - - - - 0.000000000257 70.0
CMS1_k127_5567266_0 extracellular solute-binding protein, family 5 K02035,K15584 - - 5.247e-270 837.0
CMS1_k127_5567266_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 478.0
CMS1_k127_5567266_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 479.0
CMS1_k127_5567266_3 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 304.0
CMS1_k127_5567266_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004371 248.0
CMS1_k127_5567266_5 Domain of unknown function (DUF4203) - - - 0.00000000000000000001209 100.0
CMS1_k127_5567266_6 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 0.0000000003303 64.0
CMS1_k127_5575929_0 Nitrite and sulphite reductase 4Fe-4S domain K00392 - 1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 353.0
CMS1_k127_5581698_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 486.0
CMS1_k127_5581698_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 334.0
CMS1_k127_5581698_2 Prephenate dehydratase K03856,K04518,K14170 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.5.1.54,4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000002829 168.0
CMS1_k127_5581698_3 YhhN family - - - 0.0000000000000000000000000000005353 130.0
CMS1_k127_5581698_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000002461 117.0
CMS1_k127_5581698_5 PFAM RNA recognition motif - - - 0.0000000000000000000000000005645 118.0
CMS1_k127_5582176_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 576.0
CMS1_k127_5585650_0 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 491.0
CMS1_k127_5585650_1 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000002219 220.0
CMS1_k127_5585650_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000001143 197.0
CMS1_k127_5585650_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000001618 185.0
CMS1_k127_5585650_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000002419 172.0
CMS1_k127_5585650_5 DinB superfamily - - - 0.000000000000000000000000000003892 125.0
CMS1_k127_5587852_0 PFAM AMP-dependent synthetase and ligase - - - 1.672e-221 694.0
CMS1_k127_5587852_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 353.0
CMS1_k127_5589_0 Elongator protein 3, MiaB family, Radical SAM - - - 4.306e-221 691.0
CMS1_k127_5589_1 B12 binding domain - - - 3.874e-209 663.0
CMS1_k127_5589_2 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 607.0
CMS1_k127_5589_3 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 347.0
CMS1_k127_5589_4 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002369 278.0
CMS1_k127_5589_5 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000001625 230.0
CMS1_k127_5589_6 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000005788 173.0
CMS1_k127_5589_7 Outer membrane lipoprotein carrier protein LolA - - - 0.0000000000000000000000000000000000000003216 157.0
CMS1_k127_5589_8 - - - - 0.000000000000000000000002355 111.0
CMS1_k127_5589_9 Phosphopantetheine attachment site - - - 0.00000000000000000002488 97.0
CMS1_k127_5591800_0 Protein of unknown function DUF89 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 605.0
CMS1_k127_5591800_1 CoA binding domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 480.0
CMS1_k127_5591800_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 327.0
CMS1_k127_5591800_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
CMS1_k127_5591800_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000137 251.0
CMS1_k127_5591800_5 helicase superfamily c-terminal domain K06877 - - 0.000000000000000000000000000000000000000000000000000000000000000004472 229.0
CMS1_k127_5594472_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000002637 193.0
CMS1_k127_5594472_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000006312 108.0
CMS1_k127_5601880_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1618.0
CMS1_k127_5601880_1 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1345.0
CMS1_k127_5601880_10 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 412.0
CMS1_k127_5601880_11 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 400.0
CMS1_k127_5601880_12 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 404.0
CMS1_k127_5601880_13 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 369.0
CMS1_k127_5601880_14 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000101 278.0
CMS1_k127_5601880_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009441 269.0
CMS1_k127_5601880_16 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.000000000000000000000000000000000000000000000000000004542 200.0
CMS1_k127_5601880_17 Hydrogenase maturation protease K00442 - - 0.000000000000000000000000000000000000000000001026 171.0
CMS1_k127_5601880_18 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000004363 128.0
CMS1_k127_5601880_19 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000004333 120.0
CMS1_k127_5601880_2 PFAM nickel-dependent hydrogenase large subunit K14126 - 1.8.98.5 1.064e-235 734.0
CMS1_k127_5601880_20 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000001738 106.0
CMS1_k127_5601880_21 Glycosyltransferase Family 4 - - - 0.00000006154 56.0
CMS1_k127_5601880_22 - - - - 0.00000009441 61.0
CMS1_k127_5601880_23 response regulator K02657,K03413 - - 0.0000002627 59.0
CMS1_k127_5601880_3 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 563.0
CMS1_k127_5601880_4 chlorophyll binding K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 543.0
CMS1_k127_5601880_5 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 519.0
CMS1_k127_5601880_6 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 502.0
CMS1_k127_5601880_7 Domain of unknown function (DUF4071) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 496.0
CMS1_k127_5601880_8 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 440.0
CMS1_k127_5601880_9 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 423.0
CMS1_k127_5604941_0 Glycosyl transferase family group 2 K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 496.0
CMS1_k127_5604941_1 PFAM Polysaccharide deacetylase K11931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 445.0
CMS1_k127_5604941_10 PFAM TM2 domain containing protein K03686 - - 0.0000006275 54.0
CMS1_k127_5604941_2 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 342.0
CMS1_k127_5604941_3 transcriptional regulator - - - 0.00000000000000000000000000522 118.0
CMS1_k127_5604941_4 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA K11935 - - 0.000000000000000000000000007808 129.0
CMS1_k127_5604941_5 leucine-zipper of insertion element IS481 - - - 0.00000000000007101 74.0
CMS1_k127_5604941_6 - - - - 0.0000000000002668 72.0
CMS1_k127_5604941_8 - - - - 0.00000003237 58.0
CMS1_k127_5604941_9 - - - - 0.0000003972 54.0
CMS1_k127_5608910_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 420.0
CMS1_k127_5608910_1 (Rhomboid) family K07059 - - 0.000000000000000000000000000000000000000000000000000000000001477 216.0
CMS1_k127_5608910_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000001202 117.0
CMS1_k127_5608910_3 PFAM PBS lyase HEAT-like repeat K02288,K02631 - 4.4.1.31,4.4.1.32 0.000001354 59.0
CMS1_k127_5608910_4 Diguanylate cyclase (GGDEF) domain - - - 0.00003695 55.0
CMS1_k127_5609534_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 466.0
CMS1_k127_5609534_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 0.00000000000000000000000000001791 124.0
CMS1_k127_5620774_0 PFAM NAD-dependent epimerase dehydratase - - - 6.028e-200 637.0
CMS1_k127_5620774_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 312.0
CMS1_k127_5620774_2 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004568 285.0
CMS1_k127_5620774_3 PFAM Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000000000000000001847 177.0
CMS1_k127_5626906_0 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 290.0
CMS1_k127_5626906_1 ABC1 family - - - 0.00000000000000000000000000000000002749 141.0
CMS1_k127_5626906_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000002832 135.0
CMS1_k127_5634841_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 9.711e-264 819.0
CMS1_k127_5634841_1 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000006767 159.0
CMS1_k127_5634841_2 LysM domain K21687 - - 0.0000000003922 72.0
CMS1_k127_5634841_3 Two component signalling adaptor domain K03408 - - 0.00003623 56.0
CMS1_k127_56359_0 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 421.0
CMS1_k127_56359_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 338.0
CMS1_k127_56359_2 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000000000000001254 213.0
CMS1_k127_56359_3 PFAM ATP synthase I chain - - - 0.0000000000000000000000000006171 117.0
CMS1_k127_56359_4 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000000000000000000000000665 110.0
CMS1_k127_56359_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000002117 61.0
CMS1_k127_5639691_0 - - - - 0.0000000000000000000000000000000000000000000000000949 186.0
CMS1_k127_5639691_1 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.000000000006779 67.0
CMS1_k127_5639691_2 - - - - 0.00000002475 65.0
CMS1_k127_5645642_0 AAA ATPase, central domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 451.0
CMS1_k127_5645642_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000008693 196.0
CMS1_k127_5645642_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000001169 155.0
CMS1_k127_5645642_3 3-demethylubiquinone-9 3-O-methyltransferase activity K06219 - - 0.00000000000000000001114 98.0
CMS1_k127_5655669_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 1.698e-198 625.0
CMS1_k127_5655669_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000313 190.0
CMS1_k127_5655669_2 PFAM cytoplasmic chaperone TorD family protein - - - 0.00000000000000000000000000000000000000000000000005379 192.0
CMS1_k127_5673817_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009953 563.0
CMS1_k127_5673817_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 409.0
CMS1_k127_5673817_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002093 272.0
CMS1_k127_5673817_3 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000002593 145.0
CMS1_k127_5674078_0 Multicopper oxidase - - - 0.0 1046.0
CMS1_k127_5674078_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.422e-319 989.0
CMS1_k127_5674078_10 Sporulation and spore germination - - - 0.0000000000000000000000000000003769 129.0
CMS1_k127_5674078_11 Predicted RNA-binding protein - - - 0.00000000000000000001176 92.0
CMS1_k127_5674078_12 General secretion pathway protein C K02452 - - 0.0000000000003419 82.0
CMS1_k127_5674078_13 - - - - 0.0007783 46.0
CMS1_k127_5674078_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 619.0
CMS1_k127_5674078_3 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 446.0
CMS1_k127_5674078_4 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 361.0
CMS1_k127_5674078_5 PFAM Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 377.0
CMS1_k127_5674078_6 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 335.0
CMS1_k127_5674078_7 YacP-like NYN domain K06962 - - 0.00000000000000000000000000000000000000000000000000000001615 202.0
CMS1_k127_5674078_8 Domain of unknown function (DUF3842) - - - 0.0000000000000000000000000000000000000000000000000006176 188.0
CMS1_k127_5674078_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000009485 160.0
CMS1_k127_5675323_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 405.0
CMS1_k127_5675323_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 351.0
CMS1_k127_5675323_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00034,K00046,K00059,K00216 - 1.1.1.100,1.1.1.47,1.1.1.69,1.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000004196 233.0
CMS1_k127_5675323_3 Acyl-CoA synthetase (NDP forming) K01905,K18594,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000003504 227.0
CMS1_k127_5675323_4 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000001002 115.0
CMS1_k127_5677908_0 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 573.0
CMS1_k127_5677908_1 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006763 258.0
CMS1_k127_5677908_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006022 247.0
CMS1_k127_5677908_3 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000001704 189.0
CMS1_k127_5677908_4 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000001879 93.0
CMS1_k127_5677908_5 Glutaredoxin K03676 - - 0.000000000002068 68.0
CMS1_k127_5679171_0 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 525.0
CMS1_k127_5679171_1 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 315.0
CMS1_k127_5679171_2 TIGRFAM conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001154 261.0
CMS1_k127_5679171_3 domain protein - - - 0.000000000000000000000000000000000000000000006828 186.0
CMS1_k127_5679171_4 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000002125 171.0
CMS1_k127_5679171_5 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000006062 153.0
CMS1_k127_5679171_6 - - - - 0.00000002368 61.0
CMS1_k127_5679171_7 Domain of unknown function DUF11 - - - 0.000006127 58.0
CMS1_k127_5683707_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 2.101e-312 967.0
CMS1_k127_5683707_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000001213 257.0
CMS1_k127_56876_0 glycosyl transferase group 1 K00695 - 2.4.1.13 3.207e-306 957.0
CMS1_k127_56876_1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 295.0
CMS1_k127_56876_2 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.00000000000000000000000000000001787 134.0
CMS1_k127_56876_3 - - - - 0.0000000000001183 76.0
CMS1_k127_5688299_0 4Fe-4S double cluster binding domain K00265 - 1.4.1.13,1.4.1.14 7.297e-226 703.0
CMS1_k127_5688299_1 glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001332 290.0
CMS1_k127_5688299_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000003535 154.0
CMS1_k127_5694023_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 533.0
CMS1_k127_5694023_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009428 448.0
CMS1_k127_5694023_10 - - - - 0.000000000000000000000000000000000000000000000000000000000006989 212.0
CMS1_k127_5694023_11 cheY-homologous receiver domain K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000004587 201.0
CMS1_k127_5694023_12 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000002516 162.0
CMS1_k127_5694023_13 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000327 158.0
CMS1_k127_5694023_14 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000609 131.0
CMS1_k127_5694023_15 regulatory protein, FmdB family - - - 0.000000000000000000000000000006013 121.0
CMS1_k127_5694023_16 Protein of unknown function (DUF721) - - - 0.000000000000000000000001142 107.0
CMS1_k127_5694023_17 Mitochondrial domain of unknown function (DUF1713) - - - 0.00000001656 56.0
CMS1_k127_5694023_2 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 406.0
CMS1_k127_5694023_3 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 365.0
CMS1_k127_5694023_4 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 359.0
CMS1_k127_5694023_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 304.0
CMS1_k127_5694023_6 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000378 272.0
CMS1_k127_5694023_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000002135 252.0
CMS1_k127_5694023_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009089 250.0
CMS1_k127_5694023_9 Methyltransferase small domain K15460 - 2.1.1.223 0.000000000000000000000000000000000000000000000000000000000000000000003985 241.0
CMS1_k127_5703314_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 476.0
CMS1_k127_5703314_1 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 457.0
CMS1_k127_5703314_2 PFAM Glycoside hydrolase 15-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 439.0
CMS1_k127_5703314_3 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 392.0
CMS1_k127_5703314_4 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 346.0
CMS1_k127_5703314_5 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 309.0
CMS1_k127_5703314_6 - - - - 0.0000000000000187 83.0
CMS1_k127_5703314_7 Oxygen tolerance - - - 0.000000001253 65.0
CMS1_k127_5714254_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 416.0
CMS1_k127_5714254_1 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 389.0
CMS1_k127_5714254_10 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000002606 200.0
CMS1_k127_5714254_11 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.0000000000000000000000000000000000000000000000002287 188.0
CMS1_k127_5714254_12 phosphorelay sensor kinase activity K03406 - - 0.00000000000000000000000000000000000000000000001725 178.0
CMS1_k127_5714254_13 - K08086 - - 0.000000000000000001461 94.0
CMS1_k127_5714254_14 PilZ domain - - - 0.0000113 55.0
CMS1_k127_5714254_2 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 327.0
CMS1_k127_5714254_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 306.0
CMS1_k127_5714254_4 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003258 277.0
CMS1_k127_5714254_5 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003308 276.0
CMS1_k127_5714254_6 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000009978 263.0
CMS1_k127_5714254_7 NUBPL iron-transfer P-loop NTPase K04562 - - 0.00000000000000000000000000000000000000000000000000000000000006314 224.0
CMS1_k127_5714254_8 Domain of unknown function (DUF4388) K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000001507 227.0
CMS1_k127_5714254_9 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
CMS1_k127_5714874_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 361.0
CMS1_k127_5714874_1 Multicopper K04753 - - 0.0000000000000000000000000000000001022 134.0
CMS1_k127_5717311_0 NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 2.735e-207 666.0
CMS1_k127_5717311_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000463 100.0
CMS1_k127_5717538_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 368.0
CMS1_k127_5717538_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000002075 222.0
CMS1_k127_5717538_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000001041 193.0
CMS1_k127_5717538_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000002596 196.0
CMS1_k127_5717538_4 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000008722 180.0
CMS1_k127_5717538_5 FCD - - - 0.0000000000000000000000000000000000000000004881 166.0
CMS1_k127_5717538_6 Transcriptional regulator - - - 0.00000000000000000000000000000001136 130.0
CMS1_k127_5717538_7 Transcriptional regulator K02019,K05772 - - 0.000000000000000000000000000003796 123.0
CMS1_k127_5717538_9 Probable molybdopterin binding domain - - - 0.00000000000000004241 83.0
CMS1_k127_5721733_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 481.0
CMS1_k127_5721733_1 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000000000001563 163.0
CMS1_k127_5721733_2 Bacterial SH3 domain homologues K07184 - - 0.00000000000000000000000000000373 128.0
CMS1_k127_5721733_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000001995 86.0
CMS1_k127_5728780_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 8.28e-252 783.0
CMS1_k127_5728780_1 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 327.0
CMS1_k127_5728780_10 - - - - 0.000000000119 63.0
CMS1_k127_5728780_2 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000001763 239.0
CMS1_k127_5728780_3 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000000000001225 187.0
CMS1_k127_5728780_4 ImcF-related N-terminal domain K11891 - - 0.00000000000000000000000000000000000000000000000001342 195.0
CMS1_k127_5728780_5 Type VI secretion system, TssF K11896 - - 0.00000000000000000000000000000000000000000003675 162.0
CMS1_k127_5728780_6 Type VI secretion system (T6SS), amidase effector protein 4 - - - 0.000000000000000000000000000000000001381 139.0
CMS1_k127_5728780_7 ImpA, N-terminal, type VI secretion system K11910 - - 0.0000000000000000000000000000000004514 141.0
CMS1_k127_5728780_8 Gene 25-like lysozyme K11897 - - 0.00000000000000000006941 95.0
CMS1_k127_5728780_9 Type VI secretion system (T6SS), amidase effector protein 4 - - - 0.0000000000000000005606 88.0
CMS1_k127_5735896_0 PFAM peptidase K08303 - - 2.006e-231 734.0
CMS1_k127_5735896_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 550.0
CMS1_k127_5735896_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003411 269.0
CMS1_k127_5735896_3 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005063 252.0
CMS1_k127_5735896_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000001741 168.0
CMS1_k127_5735896_5 SMART Cold shock protein K03704 - - 0.0000000000000000000009772 97.0
CMS1_k127_5735896_6 Glycosyl transferases group 1 - - - 0.000000000000001662 78.0
CMS1_k127_5735896_7 PilZ domain - - - 0.000000000003701 69.0
CMS1_k127_5735896_8 - - - - 0.00000000001205 67.0
CMS1_k127_5738093_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 444.0
CMS1_k127_5738093_1 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 380.0
CMS1_k127_5741592_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 521.0
CMS1_k127_5741592_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 386.0
CMS1_k127_5741592_2 - - - - 0.000000000000000000000000000000000005813 140.0
CMS1_k127_5741592_3 phage tail tape measure protein - - - 0.0000000000000000001177 104.0
CMS1_k127_5741592_4 Ser Thr phosphatase family protein - - - 0.00002439 51.0
CMS1_k127_57472_0 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 6.623e-237 742.0
CMS1_k127_57472_1 Belongs to the thiolase family K00626 - 2.3.1.9 3.996e-203 637.0
CMS1_k127_57472_10 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001877 282.0
CMS1_k127_57472_11 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002031 287.0
CMS1_k127_57472_12 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003108 247.0
CMS1_k127_57472_13 Bacterial regulatory proteins TetR family - - - 0.00000000000000000000000000000000000000000000000000000000000006508 223.0
CMS1_k127_57472_14 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000001242 223.0
CMS1_k127_57472_15 ribonuclease activity - - - 0.0000000000000000000000000000000000000829 146.0
CMS1_k127_57472_16 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000001628 145.0
CMS1_k127_57472_17 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000306 130.0
CMS1_k127_57472_18 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000007635 139.0
CMS1_k127_57472_19 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.0000000000000000000000000000004665 132.0
CMS1_k127_57472_2 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 9.367e-197 622.0
CMS1_k127_57472_20 Sh3 type 3 domain protein - - - 0.00000000000000000000000000001711 134.0
CMS1_k127_57472_21 Protein of unknown function (DUF1329) - - - 0.000000000000000003713 98.0
CMS1_k127_57472_22 positive regulation of growth - - - 0.000000000000000003785 89.0
CMS1_k127_57472_23 - - - - 0.0000000000000000305 86.0
CMS1_k127_57472_24 - - - - 0.0000000000000002465 88.0
CMS1_k127_57472_25 HNH nucleases - - - 0.00000000000009832 73.0
CMS1_k127_57472_26 Antibiotic biosynthesis monooxygenase - - - 0.000000000004643 70.0
CMS1_k127_57472_27 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000005269 61.0
CMS1_k127_57472_28 SnoaL-like domain - - - 0.00000005165 62.0
CMS1_k127_57472_3 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 589.0
CMS1_k127_57472_4 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 562.0
CMS1_k127_57472_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 532.0
CMS1_k127_57472_6 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 484.0
CMS1_k127_57472_7 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 480.0
CMS1_k127_57472_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 360.0
CMS1_k127_57472_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 298.0
CMS1_k127_5749082_0 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000003419 177.0
CMS1_k127_5749467_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 548.0
CMS1_k127_5749467_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000005018 78.0
CMS1_k127_5749467_2 Belongs to the HesB IscA family - - - 0.000000002789 64.0
CMS1_k127_5791071_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 408.0
CMS1_k127_5791071_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000001184 248.0
CMS1_k127_5791071_2 PAS fold - - - 0.000000000000000000000000000000000000000000000346 189.0
CMS1_k127_5791071_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000002295 153.0
CMS1_k127_5802574_0 radical SAM domain protein K03716 - 4.1.99.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 484.0
CMS1_k127_5802574_1 Elongation factor Tu domain 2 K02355 - - 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
CMS1_k127_5802574_2 - - - - 0.00000000000000001002 84.0
CMS1_k127_5805668_0 PFAM ATP-binding region ATPase domain protein K02482,K10819 - 2.7.13.3 2.841e-268 846.0
CMS1_k127_5805668_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 336.0
CMS1_k127_5805668_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000001015 185.0
CMS1_k127_5805668_3 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000004287 158.0
CMS1_k127_5805668_4 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000003889 149.0
CMS1_k127_5805668_5 - - - - 0.00000000000000000001558 98.0
CMS1_k127_5805668_6 Histidine kinase K10942 - 2.7.13.3 0.0000000000000006654 79.0
CMS1_k127_5811705_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 2.613e-271 854.0
CMS1_k127_5811705_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 406.0
CMS1_k127_5811705_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 347.0
CMS1_k127_5811705_3 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000007457 211.0
CMS1_k127_5811705_4 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000003073 165.0
CMS1_k127_5811705_5 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000002815 103.0
CMS1_k127_582725_0 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 433.0
CMS1_k127_582725_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 405.0
CMS1_k127_582725_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 392.0
CMS1_k127_582725_3 ABC transporter K02028,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 344.0
CMS1_k127_5830487_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 553.0
CMS1_k127_5830487_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000009381 224.0
CMS1_k127_5830487_2 Dicarboxylate transport - - - 0.00000000000000000000000000000000000000000000000000000000000007125 218.0
CMS1_k127_5830487_3 Protein of unknown function (DUF1318) K09978 - - 0.000000000000000000000000000005433 123.0
CMS1_k127_5830487_4 - - - - 0.0000000000001176 73.0
CMS1_k127_5838735_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 7.26e-213 689.0
CMS1_k127_5849138_0 PFAM Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 582.0
CMS1_k127_5849138_1 Cys Met metabolism pyridoxal-phosphate-dependent protein K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007942 565.0
CMS1_k127_5849138_2 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000004281 222.0
CMS1_k127_5849138_3 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000002931 119.0
CMS1_k127_5849138_4 Belongs to the UPF0306 family K09979 - - 0.000000000000000006466 91.0
CMS1_k127_5849138_5 - - - - 0.00000000000002006 78.0
CMS1_k127_5849138_6 PHP-associated - - - 0.00000001489 63.0
CMS1_k127_5851485_0 Exporters of the RND superfamily K07003 - - 0.0 1020.0
CMS1_k127_5851485_1 NADH flavin oxidoreductase NADH oxidase - - - 1.579e-290 908.0
CMS1_k127_5851485_10 CoA-transferase activity K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 385.0
CMS1_k127_5851485_11 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 369.0
CMS1_k127_5851485_12 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 351.0
CMS1_k127_5851485_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 337.0
CMS1_k127_5851485_14 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 347.0
CMS1_k127_5851485_15 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 339.0
CMS1_k127_5851485_16 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 330.0
CMS1_k127_5851485_17 CoA-transferase activity K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
CMS1_k127_5851485_18 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 315.0
CMS1_k127_5851485_19 Flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 292.0
CMS1_k127_5851485_2 - - - - 6.243e-201 644.0
CMS1_k127_5851485_20 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 289.0
CMS1_k127_5851485_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006037 247.0
CMS1_k127_5851485_22 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000005127 243.0
CMS1_k127_5851485_23 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000041 222.0
CMS1_k127_5851485_24 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000001244 198.0
CMS1_k127_5851485_25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000002536 190.0
CMS1_k127_5851485_26 Cupin domain - - - 0.000000000000000000000000000000000000000000000002934 174.0
CMS1_k127_5851485_27 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.00000000000000000000007746 100.0
CMS1_k127_5851485_28 - - - - 0.00000000009075 69.0
CMS1_k127_5851485_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00179 - 1.2.7.8 4.157e-197 623.0
CMS1_k127_5851485_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 529.0
CMS1_k127_5851485_5 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 521.0
CMS1_k127_5851485_6 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 438.0
CMS1_k127_5851485_7 Dehydrogenase K00008,K00121 - 1.1.1.1,1.1.1.14,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 440.0
CMS1_k127_5851485_8 EthD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 404.0
CMS1_k127_5851485_9 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 413.0
CMS1_k127_5864830_0 Protein of unknown function (DUF3683) - - - 0.0 1758.0
CMS1_k127_5864830_1 His Kinase A (phosphoacceptor) domain - - - 0.0 1120.0
CMS1_k127_5864830_10 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000002269 192.0
CMS1_k127_5864830_11 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000002966 162.0
CMS1_k127_5864830_12 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00001734 49.0
CMS1_k127_5864830_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 436.0
CMS1_k127_5864830_3 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 346.0
CMS1_k127_5864830_4 PhoQ Sensor K07640 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002382 281.0
CMS1_k127_5864830_5 PFAM response regulator receiver K07662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009016 266.0
CMS1_k127_5864830_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002864 253.0
CMS1_k127_5864830_7 FCD K05799 - - 0.0000000000000000000000000000000000000000000000000000000000007594 218.0
CMS1_k127_5864830_8 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000008236 209.0
CMS1_k127_5864830_9 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000309 200.0
CMS1_k127_5869164_0 UTRA domain K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 354.0
CMS1_k127_5869164_1 PFAM B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001338 274.0
CMS1_k127_5869164_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000007531 228.0
CMS1_k127_5875683_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.175e-298 926.0
CMS1_k127_5875683_1 PFAM Radical SAM domain protein K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 324.0
CMS1_k127_5875683_2 Pfam ABC - - - 0.0000000000000000000000000000000000000000000000000000003331 201.0
CMS1_k127_5875683_3 PFAM conserved K02069 - - 0.00000000000000000000000000000000000000000000000000001603 193.0
CMS1_k127_5881924_0 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1292.0
CMS1_k127_5881924_1 sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 4.19e-249 772.0
CMS1_k127_5881924_10 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K00533,K05922,K06281 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.5.1,1.12.7.2,1.12.99.6 0.000000000000000000000000000000008784 127.0
CMS1_k127_5881924_11 - - - - 0.00000000000000000000000000000001255 132.0
CMS1_k127_5881924_12 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.0000000000000000000396 92.0
CMS1_k127_5881924_2 FAD dependent oxidoreductase K16885 - - 1.533e-231 721.0
CMS1_k127_5881924_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K00533,K05922,K06281 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.5.1,1.12.7.2,1.12.99.6 1.522e-226 709.0
CMS1_k127_5881924_4 4Fe-4S dicluster domain K16887 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 539.0
CMS1_k127_5881924_5 Hydrogenase (NiFe) small subunit HydA K00534,K05927,K06282,K18008 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.5.1,1.12.7.2,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 534.0
CMS1_k127_5881924_6 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 468.0
CMS1_k127_5881924_7 cyclic nucleotide binding K04739,K10914 - - 0.000000000000000000000000000000000000000003235 161.0
CMS1_k127_5881924_8 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000003535 163.0
CMS1_k127_5881924_9 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000001271 158.0
CMS1_k127_5916458_0 Aminotransferase class-III - - - 2.246e-203 642.0
CMS1_k127_5916458_1 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 336.0
CMS1_k127_5916458_2 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000004733 168.0
CMS1_k127_5916458_3 Universal stress protein - - - 0.0000000000000000000000000000000000008833 144.0
CMS1_k127_5916458_4 YCII-related domain - - - 0.000000000000000000000000001515 111.0
CMS1_k127_5916458_5 Domain of unknown function (DUF309) K09763 - - 0.0000000000000000001145 96.0
CMS1_k127_593736_0 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 541.0
CMS1_k127_593736_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 452.0
CMS1_k127_593736_10 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.0000000000000000003503 91.0
CMS1_k127_593736_11 Heavy-metal-associated domain - - - 0.00000000000001198 75.0
CMS1_k127_593736_12 Heavy-metal resistance K07803 - - 0.000000002091 60.0
CMS1_k127_593736_13 membrane protein (DUF2078) K08982 - - 0.000000003965 63.0
CMS1_k127_593736_14 COG0607 Rhodanese-related sulfurtransferase K03151 - 2.8.1.4 0.000000006681 57.0
CMS1_k127_593736_15 Mycolic acid cyclopropane synthetase - - - 0.0000001994 54.0
CMS1_k127_593736_16 phosphatase K20074 - 3.1.3.16 0.00007258 52.0
CMS1_k127_593736_17 serine threonine protein kinase K12132 - 2.7.11.1 0.0009174 44.0
CMS1_k127_593736_2 response regulator receiver K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 421.0
CMS1_k127_593736_3 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000006029 219.0
CMS1_k127_593736_4 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000006774 210.0
CMS1_k127_593736_5 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000009812 165.0
CMS1_k127_593736_6 YCII-related domain - - - 0.0000000000000000000000000001321 120.0
CMS1_k127_593736_7 methyltransferase - - - 0.00000000000000000000001765 105.0
CMS1_k127_593736_9 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.00000000000000000003713 97.0
CMS1_k127_5950887_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07640 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 325.0
CMS1_k127_5950887_1 ErfK YbiS YcfS YnhG family protein K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000349 248.0
CMS1_k127_5952279_0 PFAM Transposase IS66 family K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 606.0
CMS1_k127_5952279_1 PFAM IS66 Orf2 like protein K07484 - - 0.000000000000000000000000000000000000000004677 158.0
CMS1_k127_5952279_2 IMG reference gene - - - 0.00000000005586 67.0
CMS1_k127_5952279_3 GMC oxidoreductase - - - 0.000000499 52.0
CMS1_k127_5953177_0 PFAM Type II IV secretion system protein K02283,K03609 - - 1.564e-214 673.0
CMS1_k127_5953177_1 AAA domain K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 372.0
CMS1_k127_5953177_2 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 355.0
CMS1_k127_5953177_3 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 356.0
CMS1_k127_5953177_4 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 294.0
CMS1_k127_5953177_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000002506 244.0
CMS1_k127_5953177_6 Type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000426 196.0
CMS1_k127_5953177_7 TadE-like protein - - - 0.0000000000000000000000000221 114.0
CMS1_k127_5953177_8 TPR repeat - - - 0.00000000000000000000001584 107.0
CMS1_k127_5953177_9 PFAM TadE family protein - - - 0.000000000000000005611 88.0
CMS1_k127_5953466_0 SMART ATP-binding region ATPase domain protein - - - 1.842e-199 651.0
CMS1_k127_5953466_1 sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 468.0
CMS1_k127_5953466_2 Sodium:solute symporter family K03307 - - 0.00000000000000000007797 92.0
CMS1_k127_5961983_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 527.0
CMS1_k127_5961983_1 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 438.0
CMS1_k127_5961983_10 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000002527 120.0
CMS1_k127_5961983_11 Nodulation protein S (NodS) K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000002712 107.0
CMS1_k127_5961983_12 Glycosyltransferase like family 2 - - - 0.0000000000000000003002 98.0
CMS1_k127_5961983_13 Psort location Cytoplasmic, score 9.26 - - - 0.0000000000000003354 86.0
CMS1_k127_5961983_14 PFAM Polysaccharide deacetylase - - - 0.000000007006 62.0
CMS1_k127_5961983_15 Glycosyltransferase like family 2 - - - 0.00000001276 67.0
CMS1_k127_5961983_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 301.0
CMS1_k127_5961983_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002777 287.0
CMS1_k127_5961983_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000006058 216.0
CMS1_k127_5961983_5 NAD(P)H-binding K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000001261 199.0
CMS1_k127_5961983_6 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000007732 188.0
CMS1_k127_5961983_7 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K03328,K16695 - - 0.0000000000000000000000000000000000000000000000003636 196.0
CMS1_k127_5961983_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000205 171.0
CMS1_k127_5961983_9 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000006041 164.0
CMS1_k127_596564_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1313.0
CMS1_k127_596564_1 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 3.158e-198 625.0
CMS1_k127_596564_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 453.0
CMS1_k127_596564_3 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 321.0
CMS1_k127_596564_4 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 308.0
CMS1_k127_596564_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000007522 244.0
CMS1_k127_596564_6 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.000000000000000000000000000008367 119.0
CMS1_k127_5967688_0 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000000000003602 237.0
CMS1_k127_5967688_1 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000008817 98.0
CMS1_k127_5967688_2 amine dehydrogenase activity - - - 0.000000000000000007596 94.0
CMS1_k127_5969475_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 4.937e-258 805.0
CMS1_k127_5969475_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 3.95e-227 707.0
CMS1_k127_5969475_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 542.0
CMS1_k127_5969475_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 350.0
CMS1_k127_5969475_4 cyclic nucleotide-binding K01420,K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000338 224.0
CMS1_k127_5969475_5 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000000000000000000000003227 216.0
CMS1_k127_5969475_6 Protein of unknown function (DUF1641) - - - 0.000000000000000000002303 96.0
CMS1_k127_5979783_0 Carbohydrate-selective porin OprB K07267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 476.0
CMS1_k127_5979783_1 Phospholipase D. Active site motifs. K06132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009591 447.0
CMS1_k127_5979783_2 response to heat K03668,K06079,K09914 - - 0.000000000000000000000000000000000002414 142.0
CMS1_k127_5984816_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 325.0
CMS1_k127_5984816_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004941 263.0
CMS1_k127_5984816_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001699 255.0
CMS1_k127_5984816_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000001611 229.0
CMS1_k127_5984816_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000001444 121.0
CMS1_k127_5987098_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.314e-297 923.0
CMS1_k127_5987098_1 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 372.0
CMS1_k127_5987098_2 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000002188 166.0
CMS1_k127_5995416_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.463e-212 668.0
CMS1_k127_5995416_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 3.332e-208 652.0
CMS1_k127_5995416_2 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 524.0
CMS1_k127_5995416_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 450.0
CMS1_k127_5995416_4 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000004866 90.0
CMS1_k127_6006150_0 PFAM Hydantoinase oxoprolinase - - - 1.488e-209 666.0
CMS1_k127_6006150_1 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 581.0
CMS1_k127_6006150_2 PFAM Histone deacetylase K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 387.0
CMS1_k127_6006150_3 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 307.0
CMS1_k127_6006150_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000002123 223.0
CMS1_k127_6045891_0 Uncharacterised protein family (UPF0182) K09118 - - 2.229e-313 984.0
CMS1_k127_6045891_1 Belongs to the Nudix hydrolase family. NudC subfamily K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 313.0
CMS1_k127_6045891_2 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000001289 196.0
CMS1_k127_6063679_0 PFAM Integrase catalytic - - - 2.001e-201 639.0
CMS1_k127_6063679_1 ISPsy14, transposition helper protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 357.0
CMS1_k127_6063679_2 PFAM Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000000002914 80.0
CMS1_k127_6063679_3 inositol 2-dehydrogenase activity - - - 0.000000002803 59.0
CMS1_k127_6074374_0 Beta-eliminating lyase K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 460.0
CMS1_k127_6074374_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 333.0
CMS1_k127_6074374_10 - - - - 0.00000000012 70.0
CMS1_k127_6074374_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000003278 244.0
CMS1_k127_6074374_3 Belongs to the PdaD family K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000006095 229.0
CMS1_k127_6074374_4 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000001537 229.0
CMS1_k127_6074374_5 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000001231 228.0
CMS1_k127_6074374_6 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000009255 220.0
CMS1_k127_6074374_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000004015 144.0
CMS1_k127_6074374_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000924 106.0
CMS1_k127_6078136_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 401.0
CMS1_k127_6078136_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 292.0
CMS1_k127_6078136_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002392 280.0
CMS1_k127_6091822_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 3.605e-250 777.0
CMS1_k127_6091822_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 545.0
CMS1_k127_6091822_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 378.0
CMS1_k127_6091822_3 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001936 243.0
CMS1_k127_6091822_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000005929 146.0
CMS1_k127_6091822_5 cheY-homologous receiver domain - - - 0.000000000000003755 78.0
CMS1_k127_6091822_6 Domain of unknown function (DUF4911) - - - 0.0000000001875 64.0
CMS1_k127_6104500_0 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000897 276.0
CMS1_k127_6104500_1 Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway K15525 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016020,GO:0016137,GO:0016138,GO:0016787,GO:0016810,GO:0016811,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 3.5.1.103 0.0000000000000000000000000000000000000008682 155.0
CMS1_k127_6104500_2 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000002283 95.0
CMS1_k127_61431_0 Phosphate acyltransferases K03928 - 3.1.1.1 3.436e-239 759.0
CMS1_k127_61431_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 523.0
CMS1_k127_61431_2 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 422.0
CMS1_k127_61431_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 376.0
CMS1_k127_61431_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 375.0
CMS1_k127_61431_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002958 259.0
CMS1_k127_61431_6 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005412 255.0
CMS1_k127_61431_7 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000003344 233.0
CMS1_k127_61431_8 NIL - - - 0.000000000000000000000000000000000000000000000000000000000005363 215.0
CMS1_k127_616121_0 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 1.763e-316 1004.0
CMS1_k127_616121_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 296.0
CMS1_k127_616121_2 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000006467 205.0
CMS1_k127_616121_3 cheY-homologous receiver domain K03413 - - 0.0000001772 54.0
CMS1_k127_6178461_0 Tripartite tricarboxylate transporter TctA family - - - 1.113e-196 625.0
CMS1_k127_6178461_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 413.0
CMS1_k127_6178461_2 PFAM Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003309 289.0
CMS1_k127_6178461_3 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00001574 49.0
CMS1_k127_6178461_4 Tripartite tricarboxylate transporter TctB family - - - 0.0001533 51.0
CMS1_k127_6202185_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 499.0
CMS1_k127_6202185_1 anaerobic respiration - - - 0.00000000000000000000000000000000000000000000000000000307 203.0
CMS1_k127_6204429_0 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 466.0
CMS1_k127_6204429_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 377.0
CMS1_k127_6204429_2 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 331.0
CMS1_k127_6204429_3 ThiF family K03148 - 2.7.7.73 0.000000000000000000000000000000000000000000000000000001834 197.0
CMS1_k127_6204429_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000001716 136.0
CMS1_k127_6204429_5 S-acyltransferase activity K02487,K06596,K07576 - - 0.000000000002869 72.0
CMS1_k127_6204429_6 ThiS family K03154 - - 0.000000001656 63.0
CMS1_k127_6204429_7 Type II/IV secretion system protein K02669 - - 0.000003319 56.0
CMS1_k127_62122_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000003303 238.0
CMS1_k127_62122_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000005498 230.0
CMS1_k127_6213176_0 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 373.0
CMS1_k127_6213176_1 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000009168 182.0
CMS1_k127_6213176_2 - - - - 0.000006897 51.0
CMS1_k127_6243347_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 564.0
CMS1_k127_6243347_1 sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 518.0
CMS1_k127_6243347_2 PFAM phosphoesterase RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
CMS1_k127_6243347_3 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 366.0
CMS1_k127_6243347_4 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 360.0
CMS1_k127_6243347_5 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007693 288.0
CMS1_k127_6243347_6 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001073 271.0
CMS1_k127_6243347_7 Hydrogenase maturation protease - - - 0.00000000000000000000000000000000000003488 148.0
CMS1_k127_6243347_8 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000002169 132.0
CMS1_k127_628209_0 Citrate transporter - - - 7.506e-276 860.0
CMS1_k127_628209_1 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 1.299e-228 715.0
CMS1_k127_628209_2 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 421.0
CMS1_k127_628209_3 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 338.0
CMS1_k127_628209_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000156 247.0
CMS1_k127_628209_5 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001065 239.0
CMS1_k127_628209_6 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000151 198.0
CMS1_k127_628209_7 response to stress - - - 0.0000000000000000000000000000000000000000000000009274 179.0
CMS1_k127_628209_8 flavin adenine dinucleotide binding K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000003093 52.0
CMS1_k127_65535_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 423.0
CMS1_k127_65535_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 361.0
CMS1_k127_65535_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 308.0
CMS1_k127_65535_3 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000001124 247.0
CMS1_k127_65535_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000003345 235.0
CMS1_k127_65535_5 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
CMS1_k127_6662_0 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 288.0
CMS1_k127_6662_1 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000002071 189.0
CMS1_k127_6662_2 Elongation factor Tu domain 2 K06207 - - 0.00000000000001271 74.0
CMS1_k127_668516_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.412e-284 884.0
CMS1_k127_668516_1 PFAM aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 388.0
CMS1_k127_668516_2 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000002089 168.0
CMS1_k127_678745_0 PFAM ABC transporter K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 567.0
CMS1_k127_678745_1 ABC-type multidrug transport system, permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 323.0
CMS1_k127_678745_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003704 284.0
CMS1_k127_678745_3 PFAM UbiE COQ5 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000001459 202.0
CMS1_k127_678745_4 Secretion protein K01993 - - 0.000000000000000000000000000000000000000000000001288 188.0
CMS1_k127_678745_5 COG0607 Rhodanese-related sulfurtransferase K03151 - 2.8.1.4 0.00000000000000000000000006439 111.0
CMS1_k127_678745_6 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000005159 96.0
CMS1_k127_678745_7 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000002075 100.0
CMS1_k127_678745_8 YHS domain - - - 0.00000000000001749 75.0
CMS1_k127_678745_9 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.0000000000001918 73.0
CMS1_k127_6797_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 473.0
CMS1_k127_6797_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000113 213.0
CMS1_k127_6797_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000002838 111.0
CMS1_k127_6797_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000005392 99.0
CMS1_k127_681015_0 NADH-quinone oxidoreductase chain L K00341 - 1.6.5.3 2.889e-202 649.0
CMS1_k127_681015_1 Belongs to the complex I 75 kDa subunit family K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 608.0
CMS1_k127_681015_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 591.0
CMS1_k127_681015_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 396.0
CMS1_k127_681015_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000009256 159.0
CMS1_k127_681015_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000002043 121.0
CMS1_k127_681015_6 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000004393 115.0
CMS1_k127_681015_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000001516 113.0
CMS1_k127_686449_0 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 2.88e-223 700.0
CMS1_k127_686449_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 315.0
CMS1_k127_686449_2 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000000000000009131 206.0
CMS1_k127_70945_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 5.149e-256 801.0
CMS1_k127_70945_1 Belongs to the thiolase family K00626 - 2.3.1.9 1.425e-209 655.0
CMS1_k127_70945_10 phosphorelay sensor kinase activity K01768,K02488,K17763 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65,4.6.1.1 0.000000000000000000000000000000000000000000000001044 188.0
CMS1_k127_70945_11 PFAM response regulator receiver - - - 0.000000000000000000000000000000000006985 139.0
CMS1_k127_70945_12 beta-lactamase domain protein - - - 0.000000000000000000000001227 115.0
CMS1_k127_70945_13 reverse transcriptase K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000005222 96.0
CMS1_k127_70945_14 Protein of unknown function (DUF2889) - - - 0.00004291 53.0
CMS1_k127_70945_2 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 492.0
CMS1_k127_70945_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 477.0
CMS1_k127_70945_4 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 464.0
CMS1_k127_70945_5 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 320.0
CMS1_k127_70945_6 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 310.0
CMS1_k127_70945_7 Histidine kinase K00936 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 310.0
CMS1_k127_70945_8 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000005015 220.0
CMS1_k127_70945_9 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000003823 198.0
CMS1_k127_716693_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 522.0
CMS1_k127_716693_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 471.0
CMS1_k127_716693_2 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 291.0
CMS1_k127_716693_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000007177 173.0
CMS1_k127_7290_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 3.244e-236 741.0
CMS1_k127_7290_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 2.195e-202 640.0
CMS1_k127_7290_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 6.973e-201 633.0
CMS1_k127_7290_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 363.0
CMS1_k127_7290_4 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 343.0
CMS1_k127_7290_5 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000001535 217.0
CMS1_k127_7290_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000003684 115.0
CMS1_k127_7290_7 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000007613 93.0
CMS1_k127_7290_8 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000000000006774 73.0
CMS1_k127_7290_9 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0002688 44.0
CMS1_k127_743946_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 6.987e-245 767.0
CMS1_k127_743946_1 phosphoenolpyruvate-dependent sugar phosphotransferase system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 573.0
CMS1_k127_743946_10 SMART Cold shock protein K03704 - - 0.0000000000000000008713 87.0
CMS1_k127_743946_11 - - - - 0.0000000000004358 72.0
CMS1_k127_743946_2 Uncharacterized protein family (UPF0051) K07033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 506.0
CMS1_k127_743946_3 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 432.0
CMS1_k127_743946_4 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 377.0
CMS1_k127_743946_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 307.0
CMS1_k127_743946_6 PASTA K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000002012 240.0
CMS1_k127_743946_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000004812 221.0
CMS1_k127_743946_8 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000003762 206.0
CMS1_k127_743946_9 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000005797 205.0
CMS1_k127_744014_0 two component, sigma54 specific, transcriptional regulator K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 574.0
CMS1_k127_744014_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 473.0
CMS1_k127_748949_0 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 3.406e-244 759.0
CMS1_k127_748949_1 Cytochrome c554 and c-prime - - - 6.06e-224 699.0
CMS1_k127_748949_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001055 231.0
CMS1_k127_748949_11 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001784 231.0
CMS1_k127_748949_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000003405 154.0
CMS1_k127_748949_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000001015 103.0
CMS1_k127_748949_14 response regulator - - - 0.0000000000002398 76.0
CMS1_k127_748949_15 PFAM Rhodanese domain protein K03892 - - 0.00000005359 57.0
CMS1_k127_748949_16 Tn3 transposase DDE domain - - - 0.00001434 48.0
CMS1_k127_748949_2 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 609.0
CMS1_k127_748949_3 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 387.0
CMS1_k127_748949_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 376.0
CMS1_k127_748949_5 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 344.0
CMS1_k127_748949_6 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 335.0
CMS1_k127_748949_7 Phosphonate ABC transporter, periplasmic K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 312.0
CMS1_k127_748949_8 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 292.0
CMS1_k127_748949_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004673 261.0
CMS1_k127_75345_0 Pyridine nucleotide-disulphide oxidoreductase - - - 1.415e-275 862.0
CMS1_k127_75345_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 441.0
CMS1_k127_75345_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000001387 190.0
CMS1_k127_75345_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000004132 184.0
CMS1_k127_785380_0 PFAM Pterin binding enzyme K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 421.0
CMS1_k127_785380_1 UTRA domain K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 356.0
CMS1_k127_785380_2 Methionine synthase B12-binding module cap domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 314.0
CMS1_k127_785380_3 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000002352 104.0
CMS1_k127_785380_4 PFAM B12 binding domain - - - 0.000000000000000000006529 95.0
CMS1_k127_79453_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 527.0
CMS1_k127_79453_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 512.0
CMS1_k127_79453_10 Uncharacterized conserved protein (DUF2196) - - - 0.000000000000000000000002375 103.0
CMS1_k127_79453_11 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000007774 99.0
CMS1_k127_79453_2 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 482.0
CMS1_k127_79453_3 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 384.0
CMS1_k127_79453_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000005044 246.0
CMS1_k127_79453_5 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.00000000000000000000000000000000000000000000000000000003441 211.0
CMS1_k127_79453_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000009426 183.0
CMS1_k127_79453_7 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000002923 182.0
CMS1_k127_79453_8 PFAM CMP dCMP deaminase zinc-binding K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000002891 181.0
CMS1_k127_79453_9 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.0000000000000000000000000000000000004155 145.0
CMS1_k127_803812_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 513.0
CMS1_k127_803812_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 504.0
CMS1_k127_803812_2 PFAM Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000001257 121.0
CMS1_k127_803812_3 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.000000000005419 66.0
CMS1_k127_803812_4 Polysaccharide biosynthesis protein - - - 0.000002947 60.0
CMS1_k127_81222_0 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 470.0
CMS1_k127_81222_1 queuosine salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 377.0
CMS1_k127_81222_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 381.0
CMS1_k127_81222_3 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000564 298.0
CMS1_k127_81222_4 esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000848 210.0
CMS1_k127_81222_5 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000001785 204.0
CMS1_k127_81222_7 PAAR repeat-containing protein - - - 0.000000005111 62.0
CMS1_k127_83554_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1007.0
CMS1_k127_83554_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.566e-200 636.0
CMS1_k127_83554_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 459.0
CMS1_k127_83554_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 420.0
CMS1_k127_83554_4 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 320.0
CMS1_k127_83554_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000407 170.0
CMS1_k127_83554_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000001552 162.0
CMS1_k127_83554_7 TIGRFAM phosphocarrier, HPr family K11189 - - 0.00000000000000004841 87.0
CMS1_k127_84298_0 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 478.0
CMS1_k127_84298_1 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 312.0
CMS1_k127_84298_2 Putative heavy-metal-binding - - - 0.0000000000000000000000000000000000000000002126 160.0
CMS1_k127_84298_3 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000785 159.0
CMS1_k127_84298_4 chaperone-mediated protein folding - - - 0.000000000000000000000000004833 123.0
CMS1_k127_84753_0 Large extracellular alpha-helical protein K06894 - - 0.0 1847.0
CMS1_k127_84753_1 penicillin binding K05367 - 2.4.1.129 3.155e-204 650.0
CMS1_k127_84753_2 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000007146 123.0
CMS1_k127_86616_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 484.0
CMS1_k127_86616_1 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 337.0
CMS1_k127_86616_2 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 289.0
CMS1_k127_86616_3 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000004777 207.0
CMS1_k127_86616_4 PIN domain - - - 0.0000000000000000000000000000000000000000000000000001678 187.0
CMS1_k127_86616_5 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000002013 147.0
CMS1_k127_86616_6 Uncharacterised protein family (UPF0158) - - - 0.000000000000000000000000000000000005287 140.0
CMS1_k127_86616_7 Ribbon-helix-helix protein, copG family - - - 0.000000000000000000000000001433 113.0
CMS1_k127_86616_8 Histidine kinase - - - 0.0000000000000000000000008065 115.0
CMS1_k127_877343_0 Domain of unknown function (DUF3394) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 511.0
CMS1_k127_877343_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 461.0
CMS1_k127_8794_0 Seven times multi-haem cytochrome CxxCH - - - 5.001e-207 655.0
CMS1_k127_8794_1 Cytochrome c-type protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008005 252.0
CMS1_k127_902475_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 376.0
CMS1_k127_902475_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009278 308.0
CMS1_k127_902475_2 lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000009834 184.0
CMS1_k127_902475_3 Tetratricopeptide TPR_2 repeat protein - - - 0.0002675 53.0
CMS1_k127_903434_0 pfam fad - - - 1.515e-239 746.0
CMS1_k127_903434_1 Cysteine-rich domain K00113 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 521.0
CMS1_k127_903434_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 387.0
CMS1_k127_903434_3 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 316.0
CMS1_k127_903434_4 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 293.0
CMS1_k127_903434_5 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000000000000000000000005491 213.0
CMS1_k127_903434_6 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000009786 210.0
CMS1_k127_907498_0 Pyridoxal-phosphate dependent enzyme K01751 - 4.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 427.0
CMS1_k127_907498_1 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 296.0
CMS1_k127_907498_2 Tellurite resistance protein TerB - - - 0.0000000000000000000000006202 110.0
CMS1_k127_907498_3 TIR domain K12132 - 2.7.11.1 0.00000000000000000000009373 106.0
CMS1_k127_907498_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000002194 96.0
CMS1_k127_907498_5 PFAM Cold-shock K03704 - - 0.000000006571 56.0
CMS1_k127_907498_6 diguanylate cyclase - - - 0.000004853 51.0
CMS1_k127_907498_7 Involved in the tonB-independent uptake of proteins - - - 0.00001352 59.0
CMS1_k127_909829_0 Serine protein kinase K07180 - - 0.0 1122.0
CMS1_k127_909829_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1038.0
CMS1_k127_909829_2 SMART molybdopterin oxidoreductase Fe4S4 region, NADH ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 593.0
CMS1_k127_909829_3 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 419.0
CMS1_k127_909829_4 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000002329 180.0
CMS1_k127_909829_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000002792 177.0
CMS1_k127_909829_6 VanZ like family - - - 0.0000000000000731 82.0
CMS1_k127_910498_0 COG0618 Exopolyphosphatase-related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 334.0
CMS1_k127_910498_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000008282 210.0
CMS1_k127_910498_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000002218 115.0
CMS1_k127_910498_3 - - - - 0.00000000000000000002979 94.0
CMS1_k127_910498_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000883 85.0
CMS1_k127_911464_0 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 467.0
CMS1_k127_911464_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 445.0
CMS1_k127_911464_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 367.0
CMS1_k127_911464_3 membrane K08978 - - 0.0000000000000000000000000000000000000138 150.0
CMS1_k127_911464_4 NlpC/P60 family K13695 - - 0.00000000000000000000000000000111 131.0
CMS1_k127_911464_5 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000002462 52.0
CMS1_k127_911466_0 membrane K08978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001878 272.0
CMS1_k127_911466_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000001412 131.0
CMS1_k127_911466_2 - - - - 0.00000000000001501 79.0
CMS1_k127_911466_3 Xylose isomerase-like TIM barrel - - - 0.00003522 46.0
CMS1_k127_911785_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 566.0
CMS1_k127_911785_1 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 393.0
CMS1_k127_911785_2 PFAM 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000001797 224.0
CMS1_k127_914981_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 308.0
CMS1_k127_914981_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K03703,K04096 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000004271 239.0
CMS1_k127_914981_2 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000001947 213.0
CMS1_k127_914981_3 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000009574 124.0
CMS1_k127_914981_4 PFAM Cytochrome C - - - 0.00000000000000000000000000004803 122.0
CMS1_k127_91745_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 589.0
CMS1_k127_91745_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 342.0
CMS1_k127_91745_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000022 96.0
CMS1_k127_920629_0 Belongs to the thiolase family K00626 - 2.3.1.9 4.355e-199 628.0
CMS1_k127_920629_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 323.0
CMS1_k127_920629_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000001159 259.0
CMS1_k127_920629_3 Ferritin-like domain K02217 - 1.16.3.2 0.0004082 44.0
CMS1_k127_921104_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 9.465e-262 811.0
CMS1_k127_921104_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000296 159.0
CMS1_k127_921104_2 Universal stress protein family - - - 0.00000000000000000000000000000000007056 139.0
CMS1_k127_923436_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 473.0
CMS1_k127_923436_1 Polysaccharide deacetylase K11931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 389.0
CMS1_k127_923436_2 PFAM Protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 357.0
CMS1_k127_923436_3 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000914 275.0
CMS1_k127_923436_4 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000004203 163.0
CMS1_k127_923436_5 - - - - 0.0000000000000000000000000001406 126.0
CMS1_k127_925045_0 PFAM Cytochrome c, class I - - - 1.26e-303 956.0
CMS1_k127_925045_1 PFAM ROK family protein K00845,K00847 - 2.7.1.2,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 360.0
CMS1_k127_925045_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 363.0
CMS1_k127_925045_3 oxidase subunit K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 291.0
CMS1_k127_925045_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799,K18990 - - 0.00001484 53.0
CMS1_k127_929702_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.33e-204 643.0
CMS1_k127_929702_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008846 377.0
CMS1_k127_929702_2 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003588 277.0
CMS1_k127_929702_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000001144 230.0
CMS1_k127_936760_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1153.0
CMS1_k127_936760_1 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 601.0
CMS1_k127_936760_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 516.0
CMS1_k127_936760_3 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 323.0
CMS1_k127_936760_4 - - - - 0.00000000000000000000000000001871 118.0
CMS1_k127_936760_5 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000008204 83.0
CMS1_k127_937951_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 466.0
CMS1_k127_937951_1 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 424.0
CMS1_k127_939018_0 chelatase, subunit ChlI K07391 - - 1.836e-221 696.0
CMS1_k127_939018_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 591.0
CMS1_k127_939018_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 402.0
CMS1_k127_939018_3 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000000000002396 211.0
CMS1_k127_939018_4 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000001175 209.0
CMS1_k127_939018_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000007385 132.0
CMS1_k127_939018_6 Protein of unknown function (DUF2892) - - - 0.0000000000000000000000007677 104.0
CMS1_k127_939018_7 Modulates RecA activity K03565 - - 0.000000000000000000009805 97.0
CMS1_k127_939018_8 - - - - 0.000000000000000001136 88.0
CMS1_k127_939910_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 600.0
CMS1_k127_939910_1 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 505.0
CMS1_k127_939910_2 Protein of unknown function (DUF554) K07150 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003324 275.0
CMS1_k127_939910_3 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007545 271.0
CMS1_k127_939910_4 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.000000000000000000000000000000000000000000000000000002459 199.0
CMS1_k127_939910_5 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000002363 128.0
CMS1_k127_939910_6 SnoaL-like polyketide cyclase - - - 0.0000000104 62.0
CMS1_k127_947065_0 Sodium/hydrogen exchanger family - - - 1.857e-244 781.0
CMS1_k127_947065_1 (ABC) transporter K06147 - - 0.000000000000000000000000003475 116.0
CMS1_k127_947065_2 response regulator, receiver - - - 0.0000000000000001098 82.0
CMS1_k127_950208_0 Belongs to the thiolase family - - - 6.142e-196 617.0
CMS1_k127_950208_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000242 109.0
CMS1_k127_953283_0 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 3.154e-280 871.0
CMS1_k127_953283_1 Elongation factor SelB winged helix K03833 - - 2.244e-256 805.0
CMS1_k127_953283_10 Uncharacterized protein conserved in bacteria (DUF2333) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 349.0
CMS1_k127_953283_11 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 293.0
CMS1_k127_953283_12 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
CMS1_k127_953283_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000006978 218.0
CMS1_k127_953283_14 Prokaryotic glutathione synthetase, ATP-grasp domain K05844 - - 0.0000000000000000000000000000000000000000000000000005452 193.0
CMS1_k127_953283_15 Domain of unknown function (DUF1992) - - - 0.00000000000000000000000000000000000000000000000001285 182.0
CMS1_k127_953283_16 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000167 187.0
CMS1_k127_953283_17 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000001108 166.0
CMS1_k127_953283_18 - - - - 0.000000000000000000000000000001399 127.0
CMS1_k127_953283_19 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000001184 128.0
CMS1_k127_953283_2 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 2.071e-215 676.0
CMS1_k127_953283_20 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000678 98.0
CMS1_k127_953283_21 - - - - 0.000000001762 58.0
CMS1_k127_953283_22 Tetratricopeptide repeat - - - 0.00000003724 63.0
CMS1_k127_953283_25 domain protein - - - 0.00002048 58.0
CMS1_k127_953283_26 PilZ domain - - - 0.0003204 50.0
CMS1_k127_953283_3 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 554.0
CMS1_k127_953283_4 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 505.0
CMS1_k127_953283_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 431.0
CMS1_k127_953283_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 419.0
CMS1_k127_953283_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 409.0
CMS1_k127_953283_8 PFAM glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 356.0
CMS1_k127_953283_9 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 354.0
CMS1_k127_960579_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1118.0
CMS1_k127_960579_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 469.0
CMS1_k127_960579_2 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008697,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016853,GO:0016860,GO:0016861,GO:0019585,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0042802,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0046872,GO:0071704,GO:0072329,GO:1901575 5.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 347.0
CMS1_k127_960579_3 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 317.0
CMS1_k127_960579_4 PFAM Cache - - - 0.00000000000000000000000000000000004925 139.0
CMS1_k127_960579_5 NAD dependent epimerase/dehydratase family K00046,K00065 - 1.1.1.127,1.1.1.69 0.000004675 49.0
CMS1_k127_962946_0 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007161 276.0
CMS1_k127_962946_1 - - - - 0.0000000000000000000000000001354 124.0
CMS1_k127_962946_2 - - - - 0.00000000002731 70.0
CMS1_k127_966636_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000317 284.0
CMS1_k127_966636_1 Peptidase, M20 K12941 - - 0.00000000000000000000000000000000000000000000000006085 185.0
CMS1_k127_966636_2 Short repeat of unknown function (DUF308) - - - 0.0002609 48.0
CMS1_k127_967864_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 460.0
CMS1_k127_967864_1 PFAM glycoside hydrolase family 13 domain protein - - - 0.0000000000000000000000000008005 120.0
CMS1_k127_967864_2 ECF sigma factor K03088 - - 0.000000000000000006309 88.0
CMS1_k127_967864_3 - - - - 0.00000000008419 73.0
CMS1_k127_972145_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 399.0
CMS1_k127_972145_1 SMART phosphoesterase PHP domain protein K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000005165 119.0
CMS1_k127_976565_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 610.0
CMS1_k127_976565_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 474.0
CMS1_k127_976565_2 - - - - 0.0000000000000000006944 91.0
CMS1_k127_97674_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1067.0
CMS1_k127_97674_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000253 148.0
CMS1_k127_977601_0 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 384.0
CMS1_k127_977601_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000008431 211.0
CMS1_k127_977601_2 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0001416 44.0
CMS1_k127_981459_0 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 2.08e-322 1004.0
CMS1_k127_981459_1 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 6.622e-280 878.0
CMS1_k127_981459_10 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000001136 197.0
CMS1_k127_981459_11 - - - - 0.000000000000000000000000000000000000003072 148.0
CMS1_k127_981459_12 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000007057 147.0
CMS1_k127_981459_13 4Fe-4S dicluster domain - - - 0.0000000000000000000000000004236 114.0
CMS1_k127_981459_14 PFAM Methyltransferase type 11 - - - 0.00000000000000000005198 90.0
CMS1_k127_981459_15 - - - - 0.0000000000000007346 89.0
CMS1_k127_981459_2 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 3.21e-248 777.0
CMS1_k127_981459_3 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.05e-222 714.0
CMS1_k127_981459_4 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 453.0
CMS1_k127_981459_5 NAD(P)H-binding K17947 - 5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 436.0
CMS1_k127_981459_6 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 401.0
CMS1_k127_981459_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 291.0
CMS1_k127_981459_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002315 256.0
CMS1_k127_981459_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000242 254.0
CMS1_k127_981798_0 Ammonium Transporter Family K03320 - - 1.904e-216 679.0
CMS1_k127_981798_1 PFAM Cation transporter K03498 - - 8.166e-201 634.0
CMS1_k127_981798_2 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 463.0
CMS1_k127_981798_3 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 434.0
CMS1_k127_981798_4 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 349.0
CMS1_k127_981798_5 - - - - 0.00000000000000000000000000000000000000000000000000000006247 205.0
CMS1_k127_981798_6 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 0.00000000000005878 82.0
CMS1_k127_984566_0 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 601.0
CMS1_k127_984566_1 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 527.0
CMS1_k127_984566_10 Transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000000003081 168.0
CMS1_k127_984566_11 PFAM ABC-2 type transporter K09694 - - 0.00000000000000000000000000000003736 126.0
CMS1_k127_984566_2 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 508.0
CMS1_k127_984566_3 Belongs to the GcvT family K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 491.0
CMS1_k127_984566_4 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 482.0
CMS1_k127_984566_5 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 436.0
CMS1_k127_984566_6 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 427.0
CMS1_k127_984566_7 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 403.0
CMS1_k127_984566_8 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 396.0
CMS1_k127_984566_9 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009572 304.0
CMS1_k127_986628_0 ATPase (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 573.0
CMS1_k127_986628_1 Belongs to the bacterial histone-like protein family K05788 - - 0.000000000000000000000000001253 118.0
CMS1_k127_986628_2 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000001185 111.0
CMS1_k127_986628_3 PFAM nuclease (SNase domain protein) - - - 0.000000000000000000000000264 106.0
CMS1_k127_986628_4 ORF6N domain - - - 0.00000000000000000000001542 106.0
CMS1_k127_986628_5 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000002882 99.0
CMS1_k127_986628_6 deoxyribonuclease I - - - 0.00000000000000001227 93.0
CMS1_k127_986628_7 PFAM nuclease (SNase domain protein) - - - 0.0000000000000007366 79.0
CMS1_k127_986628_8 - - - - 0.000000000008229 68.0
CMS1_k127_986628_9 endonuclease - - - 0.00004294 54.0
CMS1_k127_987114_0 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 1.263e-260 812.0
CMS1_k127_987114_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 443.0
CMS1_k127_987114_10 O-methyltransferase activity - - - 0.0000000000000000000000000000000000557 141.0
CMS1_k127_987114_11 Protein of unknown function (DUF2845) - - - 0.00000000008988 68.0
CMS1_k127_987114_2 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 408.0
CMS1_k127_987114_3 PFAM ABC 3 transport family K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 349.0
CMS1_k127_987114_4 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 322.0
CMS1_k127_987114_5 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 297.0
CMS1_k127_987114_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 290.0
CMS1_k127_987114_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000006495 261.0
CMS1_k127_987114_8 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000000000000000000004643 193.0
CMS1_k127_987114_9 PFAM histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000012 160.0
CMS1_k127_993636_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 5.05e-252 784.0
CMS1_k127_993636_1 COG3157 Hemolysin-coregulated protein K11903 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008106 289.0
CMS1_k127_993636_2 TIGRFAM Type VI secretion system, lysozyme-related K11905 - - 0.00000000000000000000000000000000000001711 148.0
CMS1_k127_993636_3 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.00000000000000000000000005958 108.0
CMS1_k127_997711_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 486.0
CMS1_k127_997711_1 Mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 400.0
CMS1_k127_997711_2 COG2829 Outer membrane phospholipase A K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 293.0
CMS1_k127_997711_3 YHS domain protein - - - 0.0000000000000000000001463 100.0
CMS1_k127_997711_4 - - - - 0.0000000000000003234 83.0
CMS1_k127_997711_5 gag-polyprotein putative aspartyl protease - - - 0.00000000001309 66.0
CMS1_k127_997711_6 YHS domain protein - - - 0.000000001557 60.0
CMS1_k127_997711_7 Ribonuclease BN K07058 - - 0.0001328 53.0
CMS1_k127_999546_0 PFAM Electron transfer flavoprotein alpha K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 438.0
CMS1_k127_999578_0 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000004386 255.0
CMS1_k127_999578_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000394 198.0