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Overview

ID MAG00367
Name CMS1_bin.53
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order UBA9214
Family UBA9214
Genus UBA9214
Species
Assembly information
Completeness (%) 62.76
Contamination (%) 0.23
GC content (%) 66.0
N50 (bp) 22,367
Genome size (bp) 1,772,660

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1704

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_108122_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 551.0
CMS1_k127_108122_1 Insulinase (Peptidase family M16) K00960,K07263 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 460.0
CMS1_k127_108122_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009029 439.0
CMS1_k127_108122_3 cell division K09812 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 313.0
CMS1_k127_108122_4 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000447 228.0
CMS1_k127_108122_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000008069 105.0
CMS1_k127_108122_6 endonuclease exonuclease phosphatase K07004 - - 0.00000583 57.0
CMS1_k127_1167509_0 Bacterial protein of unknown function (DUF853) K06915 - - 7.791e-204 644.0
CMS1_k127_1167509_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 601.0
CMS1_k127_1167509_10 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000001864 185.0
CMS1_k127_1167509_11 Glutathione peroxidase - - - 0.000000000000000000000000000000000000000000002006 170.0
CMS1_k127_1167509_12 COG1664 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000006027 149.0
CMS1_k127_1167509_13 Protein of unknown function (DUF3465) - - - 0.000000000000000000000000000000000001438 151.0
CMS1_k127_1167509_14 Bacterial Fe(2+) trafficking - - - 0.0000000000000000000000000000004435 125.0
CMS1_k127_1167509_15 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000846 117.0
CMS1_k127_1167509_16 - - - - 0.0000000000000000000000002256 115.0
CMS1_k127_1167509_17 Dodecin K09165 - - 0.00000000000000000000004305 101.0
CMS1_k127_1167509_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 525.0
CMS1_k127_1167509_20 Bacterial protein of unknown function (DUF937) - - - 0.00000000000003113 79.0
CMS1_k127_1167509_21 Domain of unknown function (DUF4332) - - - 0.0000000003685 64.0
CMS1_k127_1167509_22 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000003514 54.0
CMS1_k127_1167509_3 chloride channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 451.0
CMS1_k127_1167509_4 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 426.0
CMS1_k127_1167509_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 387.0
CMS1_k127_1167509_6 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009229 353.0
CMS1_k127_1167509_7 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000447 282.0
CMS1_k127_1167509_8 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
CMS1_k127_1167509_9 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000007318 185.0
CMS1_k127_1176074_0 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.0 1174.0
CMS1_k127_1176074_1 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 1.328e-267 848.0
CMS1_k127_1176074_10 outer membrane protein W K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000001214 153.0
CMS1_k127_1176074_11 FixH family K09926 - - 0.00000000000000000000000000000001026 132.0
CMS1_k127_1176074_12 Conserved TM helix - - - 0.0000000000000000000000000000000402 136.0
CMS1_k127_1176074_13 Cytochrome oxidase maturation protein cbb3-type - - - 0.000000000000001233 81.0
CMS1_k127_1176074_14 - - - - 0.000000000001237 74.0
CMS1_k127_1176074_15 Acts as a magnesium transporter K06213 - - 0.00000000007256 72.0
CMS1_k127_1176074_16 Cbb3-type cytochrome oxidase, subunit 3 K00407 - - 0.00000005589 60.0
CMS1_k127_1176074_17 domain protein - - - 0.0000001865 59.0
CMS1_k127_1176074_18 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.00003772 57.0
CMS1_k127_1176074_19 ABC-type sugar transport systems, permease components K02025,K10237 - - 0.0001859 46.0
CMS1_k127_1176074_2 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 6.653e-263 814.0
CMS1_k127_1176074_3 PFAM von Willebrand factor type A K02448 - - 1.519e-225 720.0
CMS1_k127_1176074_4 TIGRFAM cytochrome c oxidase accessory protein FixG - - - 4.829e-199 629.0
CMS1_k127_1176074_5 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 432.0
CMS1_k127_1176074_6 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 381.0
CMS1_k127_1176074_7 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 384.0
CMS1_k127_1176074_8 TIGRFAM cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 336.0
CMS1_k127_1176074_9 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000002866 228.0
CMS1_k127_1347919_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.145e-261 806.0
CMS1_k127_1347919_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.807e-229 716.0
CMS1_k127_1347919_10 glycosyl transferase - - - 0.0000000000000001416 85.0
CMS1_k127_1347919_12 Glycosyl transferase family 2 - - - 0.00003742 53.0
CMS1_k127_1347919_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 343.0
CMS1_k127_1347919_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 323.0
CMS1_k127_1347919_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001605 277.0
CMS1_k127_1347919_5 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000001206 231.0
CMS1_k127_1347919_6 NADH dehydrogenase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000008642 226.0
CMS1_k127_1347919_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000006416 204.0
CMS1_k127_1347919_8 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0000000000000000000000000000007206 137.0
CMS1_k127_1347919_9 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000001559 94.0
CMS1_k127_1399606_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.081e-260 809.0
CMS1_k127_1399606_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 5.287e-203 641.0
CMS1_k127_1399606_10 sulfur carrier activity K04085 - - 0.0000000000000003665 85.0
CMS1_k127_1399606_11 Domain of unknown function (DUF4124) - - - 0.000000000000003787 85.0
CMS1_k127_1399606_12 Chaperone - - - 0.0000001406 57.0
CMS1_k127_1399606_2 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 539.0
CMS1_k127_1399606_3 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 537.0
CMS1_k127_1399606_4 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 385.0
CMS1_k127_1399606_5 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 368.0
CMS1_k127_1399606_6 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 373.0
CMS1_k127_1399606_7 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000954 196.0
CMS1_k127_1399606_8 - - - - 0.00000000000000000000000000000000000000000003533 171.0
CMS1_k127_1399606_9 - - - - 0.00000000000000000007148 96.0
CMS1_k127_147928_0 His Kinase A (phosphoacceptor) domain K07637,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 503.0
CMS1_k127_147928_1 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 339.0
CMS1_k127_147928_2 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000001389 242.0
CMS1_k127_147928_3 PFAM Di-haem cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000001957 209.0
CMS1_k127_147928_4 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000005071 137.0
CMS1_k127_147928_5 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000001759 121.0
CMS1_k127_147928_6 Peptidase propeptide and YPEB domain - - - 0.0000000000000000000001715 100.0
CMS1_k127_147928_7 - - - - 0.000000048 55.0
CMS1_k127_1702291_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 430.0
CMS1_k127_1702291_1 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 369.0
CMS1_k127_1702291_10 Methyltransferase FkbM domain - - - 0.0000000000000178 84.0
CMS1_k127_1702291_11 Putative 2OG-Fe(II) oxygenase - - - 0.000000000007362 75.0
CMS1_k127_1702291_12 NMT1-like family - - - 0.00000000002746 76.0
CMS1_k127_1702291_2 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 368.0
CMS1_k127_1702291_3 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 325.0
CMS1_k127_1702291_4 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003129 261.0
CMS1_k127_1702291_5 response regulator K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001761 250.0
CMS1_k127_1702291_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002307 234.0
CMS1_k127_1702291_7 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000616 202.0
CMS1_k127_1702291_8 membrane K08987 - - 0.00000000000000000000000000000000000000000001386 164.0
CMS1_k127_1702291_9 Protein of unknown function (DUF2956) - - - 0.000000000000000000000000003705 114.0
CMS1_k127_1732600_0 DEAD DEAH box K03724 - - 0.0 1919.0
CMS1_k127_1732600_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 5.627e-235 742.0
CMS1_k127_1732600_10 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002374 282.0
CMS1_k127_1732600_11 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001017 278.0
CMS1_k127_1732600_12 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002781 245.0
CMS1_k127_1732600_13 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002039 244.0
CMS1_k127_1732600_14 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000002536 245.0
CMS1_k127_1732600_15 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000000000008299 207.0
CMS1_k127_1732600_16 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000001102 172.0
CMS1_k127_1732600_17 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000001394 183.0
CMS1_k127_1732600_18 Sterol-binding domain protein K03690 - - 0.0000000000000000000000000000000000000000000005887 174.0
CMS1_k127_1732600_19 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000001165 168.0
CMS1_k127_1732600_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 3.837e-230 723.0
CMS1_k127_1732600_20 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000003131 158.0
CMS1_k127_1732600_21 Rhodanese-related sulfurtransferase K01011 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 0.00000000000000000000000000000003259 133.0
CMS1_k127_1732600_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.9e-209 662.0
CMS1_k127_1732600_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 610.0
CMS1_k127_1732600_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 560.0
CMS1_k127_1732600_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 367.0
CMS1_k127_1732600_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 346.0
CMS1_k127_1732600_8 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 329.0
CMS1_k127_1732600_9 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 328.0
CMS1_k127_1829715_0 Serine dehydratase beta chain K01752 GO:0003674,GO:0003824,GO:0003941,GO:0016829,GO:0016840,GO:0016841 4.3.1.17 8.267e-210 660.0
CMS1_k127_1829715_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 502.0
CMS1_k127_1829715_10 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000006708 176.0
CMS1_k127_1829715_11 of membrane protease K07340 - - 0.000000000000000000000000000000000000000002858 167.0
CMS1_k127_1829715_12 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000006185 143.0
CMS1_k127_1829715_13 COG0695 Glutaredoxin and related proteins - - - 0.000000000000000000000000000000000009511 143.0
CMS1_k127_1829715_14 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000004099 140.0
CMS1_k127_1829715_15 - - - - 0.000000000000000000000004033 103.0
CMS1_k127_1829715_16 - - - - 0.00000002066 61.0
CMS1_k127_1829715_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 503.0
CMS1_k127_1829715_3 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 452.0
CMS1_k127_1829715_4 Related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 438.0
CMS1_k127_1829715_5 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 335.0
CMS1_k127_1829715_6 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001881 274.0
CMS1_k127_1829715_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000427 243.0
CMS1_k127_1829715_8 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000002504 205.0
CMS1_k127_1829715_9 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0000000000000000000000000000000000000000000000000001223 186.0
CMS1_k127_1843253_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 290.0
CMS1_k127_1843253_1 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000000000000000002352 233.0
CMS1_k127_1843253_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00007705 51.0
CMS1_k127_1843253_11 - - - - 0.00058 51.0
CMS1_k127_1843253_2 anaphase-promoting complex-dependent catabolic process - - - 0.000000000000000000000000000000000000000000000000000000002408 205.0
CMS1_k127_1843253_3 surface antigen - - - 0.0000000000000000000000000000000000000000000000000004301 193.0
CMS1_k127_1843253_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000044 173.0
CMS1_k127_1843253_5 - - - - 0.0000000000000000000000000000000000000000000008325 171.0
CMS1_k127_1843253_6 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000000000009313 141.0
CMS1_k127_1843253_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000005677 129.0
CMS1_k127_1843253_8 - - - - 0.0000000000000000000000002778 117.0
CMS1_k127_1843253_9 - - - - 0.00000000000002971 82.0
CMS1_k127_1894672_0 aminotransferase class I and II K14261 - - 5.193e-223 695.0
CMS1_k127_1894672_1 homoserine dehydrogenase K00003,K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 450.0
CMS1_k127_1894672_2 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 308.0
CMS1_k127_1894672_3 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001229 277.0
CMS1_k127_1894672_4 UPF0114 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001697 244.0
CMS1_k127_1894672_5 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000002727 171.0
CMS1_k127_1894672_6 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000003602 170.0
CMS1_k127_1894672_7 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000006387 148.0
CMS1_k127_1894672_8 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000001835 95.0
CMS1_k127_1894672_9 PFAM PKD domain containing protein - - - 0.0005604 52.0
CMS1_k127_194287_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1004.0
CMS1_k127_194287_1 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 1.787e-285 885.0
CMS1_k127_194287_10 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 349.0
CMS1_k127_194287_11 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 322.0
CMS1_k127_194287_12 protein methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 309.0
CMS1_k127_194287_13 response regulator receiver K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 300.0
CMS1_k127_194287_14 conserved protein involved in intracellular sulfur reduction K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000000000000001017 243.0
CMS1_k127_194287_15 Belongs to the DsrF TusC family K07236 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000000000000001558 243.0
CMS1_k127_194287_16 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000000000000001097 210.0
CMS1_k127_194287_17 CYTH K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000001391 199.0
CMS1_k127_194287_18 PFAM Rhodanese-like - - - 0.00000000000000000000000000000000000000000000000000839 193.0
CMS1_k127_194287_19 tRNA wobble position uridine thiolation K07237 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000000000000000000000000000000008543 143.0
CMS1_k127_194287_2 4Fe-4S dicluster domain - - - 1.439e-277 857.0
CMS1_k127_194287_20 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.0000000000000000000000000005092 116.0
CMS1_k127_194287_21 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000004131 111.0
CMS1_k127_194287_22 - - - - 0.0000000000000000000000006849 119.0
CMS1_k127_194287_23 CHAD domain - - - 0.000000000000000000000005222 113.0
CMS1_k127_194287_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 2.305e-203 640.0
CMS1_k127_194287_4 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 1.65e-196 622.0
CMS1_k127_194287_5 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 588.0
CMS1_k127_194287_6 FMN-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 572.0
CMS1_k127_194287_7 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007576 534.0
CMS1_k127_194287_8 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 394.0
CMS1_k127_194287_9 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 352.0
CMS1_k127_1945274_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1032.0
CMS1_k127_1945274_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008876 590.0
CMS1_k127_1945274_2 Type II transport protein GspH K08084 - - 0.000000000000000000000316 104.0
CMS1_k127_1945274_3 - - - - 0.000007034 51.0
CMS1_k127_2021679_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 533.0
CMS1_k127_2021679_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 318.0
CMS1_k127_2021679_10 RDD family - - - 0.000000000000000000000000000004207 125.0
CMS1_k127_2021679_11 - - - - 0.000000000000000606 86.0
CMS1_k127_2021679_12 - - - - 0.0000000000006775 77.0
CMS1_k127_2021679_13 surface antigen - - - 0.000000000368 69.0
CMS1_k127_2021679_2 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 305.0
CMS1_k127_2021679_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
CMS1_k127_2021679_4 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 288.0
CMS1_k127_2021679_5 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000003094 194.0
CMS1_k127_2021679_6 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000001752 186.0
CMS1_k127_2021679_7 Redoxin - - - 0.00000000000000000000000000000000000000000000004896 175.0
CMS1_k127_2021679_8 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000002956 161.0
CMS1_k127_2021679_9 - - - - 0.0000000000000000000000000000000000000004123 156.0
CMS1_k127_2133951_0 Cytochrome c-type biogenesis protein K02198 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564 - 2.407e-289 902.0
CMS1_k127_2133951_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 403.0
CMS1_k127_2133951_10 ig-like, plexins, transcription factors - - - 0.000000000000006769 87.0
CMS1_k127_2133951_11 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.0000008503 60.0
CMS1_k127_2133951_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 381.0
CMS1_k127_2133951_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001143 293.0
CMS1_k127_2133951_4 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000001656 265.0
CMS1_k127_2133951_5 TIGRFAM Cytochrome c-type biogenesis protein CcmI K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000004902 250.0
CMS1_k127_2133951_6 COG0526 Thiol-disulfide isomerase and thioredoxins K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000004753 233.0
CMS1_k127_2133951_7 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.0000000000000000000000000000000000000000000000000000000001336 209.0
CMS1_k127_2133951_8 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.00000000000000000000000000000000000000009946 163.0
CMS1_k127_2133951_9 - - - - 0.000000000000000003573 97.0
CMS1_k127_214830_0 Nickel-dependent hydrogenase K05922,K06281 - 1.12.5.1,1.12.99.6 0.0 1023.0
CMS1_k127_214830_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 4.883e-287 901.0
CMS1_k127_214830_10 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 501.0
CMS1_k127_214830_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 494.0
CMS1_k127_214830_12 Formate/nitrite transporter K06212,K21993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 474.0
CMS1_k127_214830_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 444.0
CMS1_k127_214830_14 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 406.0
CMS1_k127_214830_15 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 402.0
CMS1_k127_214830_16 PFAM NnrS family protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 389.0
CMS1_k127_214830_17 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 388.0
CMS1_k127_214830_18 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 388.0
CMS1_k127_214830_19 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 359.0
CMS1_k127_214830_2 kinase domain - - - 2.535e-264 826.0
CMS1_k127_214830_20 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 350.0
CMS1_k127_214830_21 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 333.0
CMS1_k127_214830_22 Transcriptional regulatory protein, C terminal K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
CMS1_k127_214830_23 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001164 250.0
CMS1_k127_214830_24 Cyanate lyase C-terminal domain, Cyanate hydratase K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000003024 246.0
CMS1_k127_214830_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007235 249.0
CMS1_k127_214830_26 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000005984 214.0
CMS1_k127_214830_27 - - - - 0.00000000000000000000000000000000000000000000000000000000009749 209.0
CMS1_k127_214830_28 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000001897 162.0
CMS1_k127_214830_29 - - - - 0.000000000000000000000000000000000000002581 151.0
CMS1_k127_214830_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 1.386e-212 668.0
CMS1_k127_214830_30 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000009132 154.0
CMS1_k127_214830_31 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000005604 142.0
CMS1_k127_214830_32 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000002165 137.0
CMS1_k127_214830_33 MlaC protein - - - 0.000000000000000000000000000000003617 136.0
CMS1_k127_214830_34 - - - - 0.0000000000000000000000000000001891 129.0
CMS1_k127_214830_35 - - - - 0.000000000000000000000000003311 119.0
CMS1_k127_214830_36 Heavy-metal-associated domain K07213 - - 0.000000000000000000000006737 104.0
CMS1_k127_214830_37 Sulphur globule protein - - - 0.0000000000000000001554 93.0
CMS1_k127_214830_38 HupE / UreJ protein K03192 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000001311 87.0
CMS1_k127_214830_39 - - - - 0.00000000000002697 79.0
CMS1_k127_214830_4 Cysteine-rich domain K21834 - - 1.488e-208 654.0
CMS1_k127_214830_40 nitrate reductase activity - - - 0.0000000000002244 70.0
CMS1_k127_214830_5 AAA-like domain K06915 - - 1.08e-203 647.0
CMS1_k127_214830_6 Domain of unknown function (DUF3333) K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 547.0
CMS1_k127_214830_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 539.0
CMS1_k127_214830_8 ANTAR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 526.0
CMS1_k127_214830_9 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 514.0
CMS1_k127_2185966_0 Protein of unknown function, DUF255 K06888 - - 3.234e-269 859.0
CMS1_k127_2185966_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 475.0
CMS1_k127_2185966_10 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000003214 189.0
CMS1_k127_2185966_11 response regulator - - - 0.0000000000000000000000000000000000000000000005705 175.0
CMS1_k127_2185966_12 - - - - 0.000000000000000000000001917 114.0
CMS1_k127_2185966_2 Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 436.0
CMS1_k127_2185966_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 399.0
CMS1_k127_2185966_4 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 400.0
CMS1_k127_2185966_5 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 357.0
CMS1_k127_2185966_6 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003304 279.0
CMS1_k127_2185966_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000002363 224.0
CMS1_k127_2185966_8 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000412 218.0
CMS1_k127_2185966_9 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000000002883 192.0
CMS1_k127_2224785_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1153.0
CMS1_k127_2224785_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000002734 232.0
CMS1_k127_2224785_2 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 - 0.00000000000000000000000159 106.0
CMS1_k127_2224785_3 Domain of unknown function (DUF4149) - - - 0.0000000000000000005384 92.0
CMS1_k127_2224785_4 von Willebrand factor (vWF) type A domain - - - 0.00002731 55.0
CMS1_k127_2224785_5 Subtilase family - - - 0.0008502 50.0
CMS1_k127_2229084_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2490.0
CMS1_k127_2229084_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1216.0
CMS1_k127_2229084_10 TLC ATP/ADP transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 584.0
CMS1_k127_2229084_11 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 571.0
CMS1_k127_2229084_12 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 560.0
CMS1_k127_2229084_13 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 538.0
CMS1_k127_2229084_14 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 534.0
CMS1_k127_2229084_15 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 491.0
CMS1_k127_2229084_16 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 482.0
CMS1_k127_2229084_17 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 488.0
CMS1_k127_2229084_18 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 471.0
CMS1_k127_2229084_19 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 387.0
CMS1_k127_2229084_2 carbon-nitrogen hydrolase - - - 7.34e-301 927.0
CMS1_k127_2229084_20 Osmosensitive K channel histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 387.0
CMS1_k127_2229084_21 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 362.0
CMS1_k127_2229084_22 PFAM Response regulator receiver domain K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 288.0
CMS1_k127_2229084_23 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000417 245.0
CMS1_k127_2229084_24 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000001239 246.0
CMS1_k127_2229084_25 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000594 233.0
CMS1_k127_2229084_26 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000001649 208.0
CMS1_k127_2229084_27 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000000000000002242 186.0
CMS1_k127_2229084_28 COG1525 Micrococcal nuclease (thermonuclease) homologs - - - 0.00000000000000000000000000000000000000000000000004152 190.0
CMS1_k127_2229084_29 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000007785 178.0
CMS1_k127_2229084_3 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 5.866e-277 874.0
CMS1_k127_2229084_30 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000001894 178.0
CMS1_k127_2229084_31 pilus assembly protein PilP K02665 - - 0.000000000000000000000000000000000000000003658 161.0
CMS1_k127_2229084_32 Sel1-like repeats. - - - 0.00000000000000000000000000000000000000002642 157.0
CMS1_k127_2229084_33 - - - - 0.00000000000000000003022 92.0
CMS1_k127_2229084_34 Protein of unknown function (DUF3135) - - - 0.00000000000000006966 85.0
CMS1_k127_2229084_35 Cysteine-rich CPXCG - - - 0.0000000000000009189 80.0
CMS1_k127_2229084_36 rho-dependent transcription termination K19000 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000162 73.0
CMS1_k127_2229084_37 lyase activity - - - 0.0000000000007542 78.0
CMS1_k127_2229084_4 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 5.993e-243 759.0
CMS1_k127_2229084_5 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 1.684e-242 760.0
CMS1_k127_2229084_6 Transport of potassium into the cell K03549 - - 8.18e-242 762.0
CMS1_k127_2229084_7 type IV pilus secretin PilQ K02666 - - 3.16e-229 730.0
CMS1_k127_2229084_8 Sulfatase - - - 2.713e-224 713.0
CMS1_k127_2229084_9 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 611.0
CMS1_k127_2473606_0 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 545.0
CMS1_k127_2473606_1 Sulfatase K03760 - 2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 486.0
CMS1_k127_2473606_2 Magnesium transport protein CorA K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 432.0
CMS1_k127_2473606_3 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 351.0
CMS1_k127_2473606_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000001638 229.0
CMS1_k127_2473606_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000005328 211.0
CMS1_k127_2473606_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000174 181.0
CMS1_k127_2473606_7 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000003528 184.0
CMS1_k127_2473606_8 - - - - 0.0000000000000000000000000000003966 128.0
CMS1_k127_2489325_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520 - 1.16.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 550.0
CMS1_k127_2489325_1 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 461.0
CMS1_k127_2489325_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 447.0
CMS1_k127_2489325_3 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 426.0
CMS1_k127_2489325_4 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 370.0
CMS1_k127_2489325_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 302.0
CMS1_k127_2489325_6 Pfam SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000172 245.0
CMS1_k127_2489325_7 - - - - 0.000000000000009035 78.0
CMS1_k127_2710540_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 565.0
CMS1_k127_2710540_1 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 503.0
CMS1_k127_2710540_10 Cytochrome c - - - 0.0000000000000000006108 95.0
CMS1_k127_2710540_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 389.0
CMS1_k127_2710540_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 306.0
CMS1_k127_2710540_4 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 285.0
CMS1_k127_2710540_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006601 289.0
CMS1_k127_2710540_6 Scavenger mRNA decapping enzyme C-term binding K02503 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 - 0.000000000000000000000000000000000000000000000002798 174.0
CMS1_k127_2710540_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000008424 173.0
CMS1_k127_2710540_8 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000001638 155.0
CMS1_k127_2710540_9 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000001827 140.0
CMS1_k127_2739398_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.728e-240 770.0
CMS1_k127_2739398_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.697e-219 685.0
CMS1_k127_2739398_10 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 322.0
CMS1_k127_2739398_11 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 310.0
CMS1_k127_2739398_12 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 302.0
CMS1_k127_2739398_13 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 293.0
CMS1_k127_2739398_14 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 289.0
CMS1_k127_2739398_15 PFAM Glutathione S-transferase K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001867 281.0
CMS1_k127_2739398_16 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007148 267.0
CMS1_k127_2739398_17 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000005317 219.0
CMS1_k127_2739398_18 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000001269 218.0
CMS1_k127_2739398_19 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000002281 195.0
CMS1_k127_2739398_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.962e-207 650.0
CMS1_k127_2739398_20 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000001768 193.0
CMS1_k127_2739398_21 toluene tolerance K07323 - - 0.0000000000000000000000000000000000000000000000003746 182.0
CMS1_k127_2739398_22 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000008814 149.0
CMS1_k127_2739398_23 Belongs to the BolA IbaG family - - - 0.000000000000000003612 88.0
CMS1_k127_2739398_24 Belongs to the UPF0312 family - - - 0.000000000000002132 85.0
CMS1_k127_2739398_25 PFAM Sulfate transporter antisigma-factor antagonist STAS K07122 - - 0.000000000000004813 81.0
CMS1_k127_2739398_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.158e-201 635.0
CMS1_k127_2739398_4 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 600.0
CMS1_k127_2739398_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 486.0
CMS1_k127_2739398_6 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 454.0
CMS1_k127_2739398_7 Trypsin K04691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 449.0
CMS1_k127_2739398_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 434.0
CMS1_k127_2739398_9 ABC transporter permease K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 344.0
CMS1_k127_2746044_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 4.616e-281 868.0
CMS1_k127_2746044_1 TIGRFAM type VI secretion protein, VC_A0110 family K11896 - - 4.775e-265 829.0
CMS1_k127_2746044_2 type VI secretion protein K11895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 364.0
CMS1_k127_2746044_3 ImpA, N-terminal, type VI secretion system K11902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 345.0
CMS1_k127_2746044_4 ImpE protein K11898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 333.0
CMS1_k127_2746044_5 TIGRFAM type VI secretion protein, VC_A0107 family K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 290.0
CMS1_k127_2746044_6 TIGRFAM Type VI secretion system effector, Hcp1 K11903 - - 0.000000000000000000000000000000000000000000000000000000000001028 213.0
CMS1_k127_2746044_7 TIGRFAM Type VI secretion system, lysozyme-related K11897 - - 0.00000000000000000000000000000000000000000000000000000000004921 209.0
CMS1_k127_2746044_8 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.000000000000000000000000000000000000000000000000000000006836 200.0
CMS1_k127_284320_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 1.076e-229 726.0
CMS1_k127_284320_1 COG1077 Actin-like ATPase involved in cell morphogenesis K03569 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - 6.086e-197 617.0
CMS1_k127_284320_10 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000002115 136.0
CMS1_k127_284320_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 452.0
CMS1_k127_284320_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 443.0
CMS1_k127_284320_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 451.0
CMS1_k127_284320_5 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 355.0
CMS1_k127_284320_6 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 332.0
CMS1_k127_284320_7 Cell shape-determining protein K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0043621,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944,GO:0071963 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008208 300.0
CMS1_k127_284320_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002731 274.0
CMS1_k127_284320_9 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000005629 182.0
CMS1_k127_2858360_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 322.0
CMS1_k127_2858360_1 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000006128 166.0
CMS1_k127_2858360_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000008916 165.0
CMS1_k127_2858360_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000001985 133.0
CMS1_k127_2874318_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 551.0
CMS1_k127_2874318_1 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 479.0
CMS1_k127_2874318_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K16950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 482.0
CMS1_k127_2874318_3 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 373.0
CMS1_k127_2874318_4 2 iron, 2 sulfur cluster binding K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 362.0
CMS1_k127_2874318_5 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000000000256 157.0
CMS1_k127_2874318_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000001104 121.0
CMS1_k127_2909758_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 4.586e-287 919.0
CMS1_k127_2909758_1 double-strand break repair protein AddB K16899 - 3.6.4.12 4.724e-217 707.0
CMS1_k127_2909758_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 9.979e-208 658.0
CMS1_k127_2909758_3 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 427.0
CMS1_k127_2909758_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000001704 240.0
CMS1_k127_2909758_5 PFAM Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000003572 241.0
CMS1_k127_2909758_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
CMS1_k127_2909758_7 AMP-binding enzyme - - - 0.00000000000000000000000000000001227 139.0
CMS1_k127_2911024_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 518.0
CMS1_k127_2911024_1 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 385.0
CMS1_k127_2911024_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 322.0
CMS1_k127_2911024_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 GO:0003674,GO:0003824,GO:0008119,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008757,GO:0010035,GO:0010038,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0046690,GO:0050896 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000004767 240.0
CMS1_k127_2911024_4 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000507 246.0
CMS1_k127_2911024_5 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000003489 223.0
CMS1_k127_2911024_6 - - - - 0.0000000000000000000000000000000000000000000000000000001653 198.0
CMS1_k127_2911024_7 cytochrome - - - 0.000000000000000000000000000000008282 129.0
CMS1_k127_2931706_0 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 479.0
CMS1_k127_2931706_1 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 391.0
CMS1_k127_2931706_10 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.0000000000000000000000000000000000000000000000000000004428 197.0
CMS1_k127_2931706_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000000000001285 186.0
CMS1_k127_2931706_12 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000174 165.0
CMS1_k127_2931706_13 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000000000000169 154.0
CMS1_k127_2931706_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000002999 137.0
CMS1_k127_2931706_15 PFAM Acetyltransferase (GNAT) family K03824 - - 0.0000000000000000000000000000004966 129.0
CMS1_k127_2931706_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 378.0
CMS1_k127_2931706_3 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 343.0
CMS1_k127_2931706_4 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 328.0
CMS1_k127_2931706_5 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 330.0
CMS1_k127_2931706_6 Abc transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004027 295.0
CMS1_k127_2931706_7 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002259 250.0
CMS1_k127_2931706_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000001126 253.0
CMS1_k127_2931706_9 - - - - 0.0000000000000000000000000000000000000000000000000000000004587 223.0
CMS1_k127_2996366_0 Subtilase family - - - 4.453e-205 667.0
CMS1_k127_2996366_1 HipA-like C-terminal domain K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 562.0
CMS1_k127_2996366_10 PrcB C-terminal - - - 0.000002113 57.0
CMS1_k127_2996366_11 Diguanylate cyclase, GGDEF domain - - - 0.00001888 50.0
CMS1_k127_2996366_2 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 383.0
CMS1_k127_2996366_3 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000004048 250.0
CMS1_k127_2996366_4 Belongs to the phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000001647 217.0
CMS1_k127_2996366_5 SH3 domain K07184 - - 0.00000000000000000000000000000000000000000000000000002675 195.0
CMS1_k127_2996366_6 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000006597 158.0
CMS1_k127_2996366_7 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000002249 116.0
CMS1_k127_2996366_8 Putative diguanylate phosphodiesterase - - - 0.0000000000000007524 83.0
CMS1_k127_2996366_9 Putative diguanylate phosphodiesterase - - - 0.0000000001492 66.0
CMS1_k127_3097319_0 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 444.0
CMS1_k127_3097319_1 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 352.0
CMS1_k127_3097319_2 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004423 270.0
CMS1_k127_3097319_3 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000006577 160.0
CMS1_k127_3097319_4 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000004963 123.0
CMS1_k127_3097319_5 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000005161 83.0
CMS1_k127_3097319_6 Neisseria PilC beta-propeller domain K02674 - - 0.000000000000007811 79.0
CMS1_k127_3097319_7 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000003429 63.0
CMS1_k127_3097319_8 Type II secretion system protein B K02451 - - 0.000002145 55.0
CMS1_k127_3238235_0 pfam php K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 347.0
CMS1_k127_3238235_1 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 293.0
CMS1_k127_3238235_2 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006838 278.0
CMS1_k127_3238235_3 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000004046 230.0
CMS1_k127_3238235_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000005946 209.0
CMS1_k127_3238235_5 - - - - 0.000000000000000000000000000000000000000000000822 174.0
CMS1_k127_3238235_6 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K05527,K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000008217 159.0
CMS1_k127_3238235_7 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000001328 106.0
CMS1_k127_3238235_8 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000008315 80.0
CMS1_k127_3254650_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 1.393e-260 834.0
CMS1_k127_3254650_1 His Kinase A (phosphoacceptor) domain - - - 2.136e-202 652.0
CMS1_k127_3254650_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 422.0
CMS1_k127_3254650_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 360.0
CMS1_k127_3254650_4 response regulator receiver K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 323.0
CMS1_k127_3254650_5 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000002461 117.0
CMS1_k127_3254650_6 - - - - 0.000000000000000000000000002089 115.0
CMS1_k127_3597439_0 - - - - 1.805e-295 926.0
CMS1_k127_3597439_1 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 486.0
CMS1_k127_3597439_10 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000006356 100.0
CMS1_k127_3597439_11 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000413 82.0
CMS1_k127_3597439_12 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0000126 52.0
CMS1_k127_3597439_13 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.0005888 46.0
CMS1_k127_3597439_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 411.0
CMS1_k127_3597439_3 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 335.0
CMS1_k127_3597439_4 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
CMS1_k127_3597439_5 Molybdate transporter of MFS superfamily - - - 0.00000000000000000000000000000000000000000000000000000004846 205.0
CMS1_k127_3597439_6 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000001351 180.0
CMS1_k127_3597439_7 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000004665 157.0
CMS1_k127_3597439_8 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000004215 117.0
CMS1_k127_3597439_9 PFAM Xanthine uracil vitamin C permease K03321 - - 0.00000000000000000000001499 108.0
CMS1_k127_3614426_0 DEAD DEAH box K06877 - - 0.0 1231.0
CMS1_k127_3614426_1 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 9.773e-294 925.0
CMS1_k127_3614426_10 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000000000000000000000000000007097 201.0
CMS1_k127_3614426_11 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000003784 177.0
CMS1_k127_3614426_12 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000000000002125 155.0
CMS1_k127_3614426_13 Belongs to the HesB IscA family K05997,K13628 - - 0.0000000000000000000000000000000003226 135.0
CMS1_k127_3614426_14 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000003844 141.0
CMS1_k127_3614426_15 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000000003915 131.0
CMS1_k127_3614426_16 Integrase core domain - - - 0.0000205 50.0
CMS1_k127_3614426_2 TIGRFAM FeS assembly protein SufB K09014 - - 2.054e-266 826.0
CMS1_k127_3614426_3 FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 404.0
CMS1_k127_3614426_4 Aldo keto - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 374.0
CMS1_k127_3614426_5 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 373.0
CMS1_k127_3614426_6 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 322.0
CMS1_k127_3614426_7 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005562 273.0
CMS1_k127_3614426_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006986 255.0
CMS1_k127_3614426_9 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000691 219.0
CMS1_k127_3616759_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1188.0
CMS1_k127_3616759_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1095.0
CMS1_k127_3616759_10 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 555.0
CMS1_k127_3616759_11 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 438.0
CMS1_k127_3616759_12 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 386.0
CMS1_k127_3616759_13 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002685 295.0
CMS1_k127_3616759_14 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000003432 237.0
CMS1_k127_3616759_15 receiver - - - 0.0000000000000000000000000000000000000000000000000000006151 211.0
CMS1_k127_3616759_16 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000001231 143.0
CMS1_k127_3616759_17 SnoaL-like domain - - - 0.000000000000000000000000000000000004674 144.0
CMS1_k127_3616759_18 - - - - 0.000000000128 69.0
CMS1_k127_3616759_2 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 5.969e-287 907.0
CMS1_k127_3616759_20 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.00000006579 54.0
CMS1_k127_3616759_21 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 - 1.12.1.2 0.0001354 53.0
CMS1_k127_3616759_3 Phosphoglucose isomerase K01810 - 5.3.1.9 2.861e-224 709.0
CMS1_k127_3616759_4 Belongs to the glycosyl hydrolase 57 family - - - 8.412e-219 692.0
CMS1_k127_3616759_5 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.747e-216 679.0
CMS1_k127_3616759_6 4-Hydroxyphenylpyruvate dioxygenase - - - 3.359e-206 660.0
CMS1_k127_3616759_7 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 7.046e-194 621.0
CMS1_k127_3616759_8 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 600.0
CMS1_k127_3616759_9 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 557.0
CMS1_k127_3702187_0 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 431.0
CMS1_k127_3702187_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000966 340.0
CMS1_k127_3702187_2 PFAM Sulphatase-modifying factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001233 304.0
CMS1_k127_3702187_3 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000007625 139.0
CMS1_k127_3702187_4 - - - - 0.0000000000000000000000000000003074 126.0
CMS1_k127_3702187_6 - - - - 0.00000000000003783 82.0
CMS1_k127_3702187_7 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.0005282 50.0
CMS1_k127_3758962_0 DNA polymerase X family K02347 - - 1.352e-259 810.0
CMS1_k127_3758962_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.381e-202 638.0
CMS1_k127_3758962_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000004987 226.0
CMS1_k127_3758962_11 Protein of unknown function (DUF1614) - - - 0.00000000000000000000000000000000000000000000000000001872 198.0
CMS1_k127_3758962_12 Protein of unknown function (DUF504) - - - 0.0000000000000000000000000000008555 126.0
CMS1_k127_3758962_14 Peptidase family M28 - - - 0.0000000000002792 72.0
CMS1_k127_3758962_15 Peptidase family M28 - - - 0.00000000003763 69.0
CMS1_k127_3758962_16 Peptidase family M28 - - - 0.000007195 53.0
CMS1_k127_3758962_2 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 587.0
CMS1_k127_3758962_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 560.0
CMS1_k127_3758962_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 517.0
CMS1_k127_3758962_5 Trypsin K04691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 449.0
CMS1_k127_3758962_6 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 412.0
CMS1_k127_3758962_7 NGG1p interacting factor 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 320.0
CMS1_k127_3758962_8 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 293.0
CMS1_k127_3758962_9 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001403 250.0
CMS1_k127_381683_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.963e-302 942.0
CMS1_k127_381683_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 9.272e-225 722.0
CMS1_k127_381683_10 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 436.0
CMS1_k127_381683_11 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 418.0
CMS1_k127_381683_12 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 404.0
CMS1_k127_381683_13 Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 401.0
CMS1_k127_381683_14 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 386.0
CMS1_k127_381683_15 metal ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 368.0
CMS1_k127_381683_16 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 349.0
CMS1_k127_381683_17 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 365.0
CMS1_k127_381683_18 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 296.0
CMS1_k127_381683_19 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 291.0
CMS1_k127_381683_2 Ion channel K10716 - - 3.155e-206 655.0
CMS1_k127_381683_20 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 293.0
CMS1_k127_381683_21 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
CMS1_k127_381683_22 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000238 274.0
CMS1_k127_381683_23 Carbonic anhydrase K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007171 271.0
CMS1_k127_381683_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001407 271.0
CMS1_k127_381683_25 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000003556 265.0
CMS1_k127_381683_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007141 263.0
CMS1_k127_381683_27 PFAM Sodium sulphate symporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003159 261.0
CMS1_k127_381683_28 PGAP1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008023 251.0
CMS1_k127_381683_29 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000007195 224.0
CMS1_k127_381683_3 glutamate--cysteine ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 573.0
CMS1_k127_381683_30 cell redox homeostasis K00221 - 4.99.1.2 0.00000000000000000000000000000000000000000000000000000000002192 213.0
CMS1_k127_381683_31 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000003735 214.0
CMS1_k127_381683_32 - - - - 0.00000000000000000000000000000000000000000000000000000002657 198.0
CMS1_k127_381683_33 Sodium:sulfate symporter transmembrane region K14445 - - 0.00000000000000000000000000000000000000000000000004729 194.0
CMS1_k127_381683_34 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000008218 180.0
CMS1_k127_381683_35 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000004253 172.0
CMS1_k127_381683_36 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000006712 177.0
CMS1_k127_381683_37 Haem-degrading - - - 0.000000000000000000000000000000000000000006654 160.0
CMS1_k127_381683_38 - - - - 0.000000000000000000000000000000000000001419 149.0
CMS1_k127_381683_39 DNA-binding transcription factor activity K03892,K07721,K22042,K22491 - - 0.000000000000000000000000000000000000003072 148.0
CMS1_k127_381683_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008411 495.0
CMS1_k127_381683_40 - - - - 0.00000000000000000000000000000000000000494 151.0
CMS1_k127_381683_41 - - - - 0.00000000000000000000000000000000000001122 150.0
CMS1_k127_381683_43 - - - - 0.000000000000000000000000000000000000131 146.0
CMS1_k127_381683_44 Domain of unknown function (DUF1820) - - - 0.0000000000000000000000000000000000002232 145.0
CMS1_k127_381683_45 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.1.107 0.000000000000000000000000000000000000271 143.0
CMS1_k127_381683_46 - - - - 0.0000000000000000000000000000000000006681 148.0
CMS1_k127_381683_47 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000565 143.0
CMS1_k127_381683_48 - - - - 0.000000000000000000000000000000001365 148.0
CMS1_k127_381683_49 proteolysis - - - 0.000000000000000000000000000002316 129.0
CMS1_k127_381683_5 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 465.0
CMS1_k127_381683_50 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000000000000533 122.0
CMS1_k127_381683_51 CDP-archaeol synthase K19664 - 2.7.7.67 0.00000000000000000000000000001524 124.0
CMS1_k127_381683_52 - - - - 0.00000000000000000000000000006163 123.0
CMS1_k127_381683_53 Glutaredoxin - - - 0.000000000000000000000000009228 114.0
CMS1_k127_381683_54 - - - - 0.0000000000000000000000001253 116.0
CMS1_k127_381683_55 Protein of unknown function, DUF481 - - - 0.0000000000000000000000009959 113.0
CMS1_k127_381683_56 Histidine kinase - - - 0.00000000000000000000001393 103.0
CMS1_k127_381683_57 Belongs to the UPF0250 family - - - 0.00000000000000000000002532 109.0
CMS1_k127_381683_58 - - - - 0.00000000000000000002095 95.0
CMS1_k127_381683_59 TIGRFAM Diguanylate cyclase - - - 0.000000000000002993 81.0
CMS1_k127_381683_6 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 444.0
CMS1_k127_381683_60 PFAM Sodium sulphate symporter K14445 - - 0.0000000000005641 72.0
CMS1_k127_381683_62 COG1291 Flagellar motor component K02556 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009288,GO:0009425,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044425,GO:0044459,GO:0044461,GO:0044463,GO:0044464,GO:0071944,GO:0120100,GO:0120101 - 0.000000000005922 72.0
CMS1_k127_381683_64 heat shock protein binding - - - 0.00000000001523 70.0
CMS1_k127_381683_67 Protein of unknown function (DUF3301) - - - 0.0000000002832 64.0
CMS1_k127_381683_68 ANTAR K22010 - - 0.000000008323 63.0
CMS1_k127_381683_69 Domain of unknown function (DUF4124) - - - 0.0000008828 58.0
CMS1_k127_381683_7 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 439.0
CMS1_k127_381683_70 Diguanylate cyclase - - - 0.00003024 47.0
CMS1_k127_381683_71 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000691 53.0
CMS1_k127_381683_8 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 450.0
CMS1_k127_381683_9 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 436.0
CMS1_k127_3825003_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1239.0
CMS1_k127_3825003_1 Extracellular solute-binding protein - - - 0.0 1013.0
CMS1_k127_3825003_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000007511 120.0
CMS1_k127_3825003_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 2.527e-274 865.0
CMS1_k127_3825003_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 590.0
CMS1_k127_3825003_4 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 511.0
CMS1_k127_3825003_5 Sodium:dicarboxylate symporter family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 509.0
CMS1_k127_3825003_6 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 497.0
CMS1_k127_3825003_7 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 388.0
CMS1_k127_3825003_8 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 378.0
CMS1_k127_3825003_9 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 355.0
CMS1_k127_3861542_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 2.567e-273 862.0
CMS1_k127_3861542_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 463.0
CMS1_k127_3861542_2 Transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3' - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 366.0
CMS1_k127_3861542_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 348.0
CMS1_k127_3861542_4 subfamily IB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 303.0
CMS1_k127_3861542_5 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001384 262.0
CMS1_k127_3861542_6 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004187 244.0
CMS1_k127_3861542_7 PFAM Sulfotransferase domain - - - 0.0000000000000000000000000002325 125.0
CMS1_k127_3861542_8 Transposase DDE domain - - - 0.000000000000001897 76.0
CMS1_k127_3861542_9 chlorophyll binding - - - 0.00004261 56.0
CMS1_k127_3888851_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0 1059.0
CMS1_k127_3888851_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 527.0
CMS1_k127_3888851_2 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 351.0
CMS1_k127_3888851_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
CMS1_k127_3888851_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001696 251.0
CMS1_k127_3888851_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000000000252 239.0
CMS1_k127_3888851_6 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000001316 236.0
CMS1_k127_3888851_7 - - - - 0.000000000000000000000000000000000000000000000000000000004735 210.0
CMS1_k127_3888851_8 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000002938 143.0
CMS1_k127_3888851_9 - - - - 0.00000000266 66.0
CMS1_k127_3914163_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 9.031e-313 978.0
CMS1_k127_3914163_1 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 5.807e-297 934.0
CMS1_k127_3914163_10 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 359.0
CMS1_k127_3914163_11 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 335.0
CMS1_k127_3914163_12 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 326.0
CMS1_k127_3914163_13 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 299.0
CMS1_k127_3914163_14 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 295.0
CMS1_k127_3914163_15 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003891 274.0
CMS1_k127_3914163_16 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002507 237.0
CMS1_k127_3914163_17 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000007222 215.0
CMS1_k127_3914163_18 CBS domain - - - 0.0000000000000000000000000000000002025 136.0
CMS1_k127_3914163_19 Polyketide cyclase / dehydrase and lipid transport K18588 - - 0.000000000000000000000003004 108.0
CMS1_k127_3914163_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.198e-224 704.0
CMS1_k127_3914163_20 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000003286 93.0
CMS1_k127_3914163_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 2.406e-207 659.0
CMS1_k127_3914163_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351,K16246 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 609.0
CMS1_k127_3914163_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347,K03614 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 575.0
CMS1_k127_3914163_6 Pyruvate ferredoxin oxidoreductase K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009954 520.0
CMS1_k127_3914163_7 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 523.0
CMS1_k127_3914163_8 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 513.0
CMS1_k127_3914163_9 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 454.0
CMS1_k127_3984732_0 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007375 242.0
CMS1_k127_3984732_1 Ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005077 242.0
CMS1_k127_3984732_2 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000000000000000000009299 222.0
CMS1_k127_3984732_3 Thiamine-binding protein - - - 0.00000000000000000000000000000000000003945 147.0
CMS1_k127_3984732_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000001486 144.0
CMS1_k127_3984732_5 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000001242 79.0
CMS1_k127_3984732_6 - - - - 0.00002609 49.0
CMS1_k127_3984732_7 cellulase activity - - - 0.00004038 53.0
CMS1_k127_4163158_0 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 535.0
CMS1_k127_4163158_1 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 527.0
CMS1_k127_4163158_10 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000000000000005895 205.0
CMS1_k127_4163158_11 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000006449 205.0
CMS1_k127_4163158_12 Protein of unknown function (DUF504) - - - 0.00000000000000000000000000000004586 127.0
CMS1_k127_4163158_13 - - - - 0.0000000000000000000000000001685 120.0
CMS1_k127_4163158_14 HNH endonuclease - - - 0.000000000000000000000000004653 113.0
CMS1_k127_4163158_15 50S ribosome-binding GTPase K06883 - - 0.00000000000000000000006143 100.0
CMS1_k127_4163158_16 - - - - 0.0000000000000001633 87.0
CMS1_k127_4163158_17 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000001629 81.0
CMS1_k127_4163158_2 amine dehydrogenase activity K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 516.0
CMS1_k127_4163158_20 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.0000000000003655 72.0
CMS1_k127_4163158_21 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000003895 76.0
CMS1_k127_4163158_22 helix_turn_helix, Lux Regulon - - - 0.0000000003446 69.0
CMS1_k127_4163158_23 Bacterial extracellular solute-binding protein - - - 0.000000002182 70.0
CMS1_k127_4163158_24 2-epimerase K16213 - 5.1.3.11 0.0001065 50.0
CMS1_k127_4163158_25 Cytochrome c - - - 0.0001584 55.0
CMS1_k127_4163158_3 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 486.0
CMS1_k127_4163158_4 Domain of unknown function (DUF697) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 472.0
CMS1_k127_4163158_5 His Kinase A (phosphoacceptor) domain K11711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 379.0
CMS1_k127_4163158_6 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002606 277.0
CMS1_k127_4163158_7 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002148 252.0
CMS1_k127_4163158_8 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000001172 257.0
CMS1_k127_4163158_9 PFAM Response regulator receiver domain K07689 - - 0.00000000000000000000000000000000000000000000000000000000003208 216.0
CMS1_k127_4175972_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.607e-198 625.0
CMS1_k127_4175972_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 493.0
CMS1_k127_4175972_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001137 230.0
CMS1_k127_4175972_11 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000006417 207.0
CMS1_k127_4175972_12 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000001019 196.0
CMS1_k127_4175972_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000003797 189.0
CMS1_k127_4175972_14 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000001307 187.0
CMS1_k127_4175972_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000007412 175.0
CMS1_k127_4175972_16 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000008798 165.0
CMS1_k127_4175972_17 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000000362 162.0
CMS1_k127_4175972_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000001625 160.0
CMS1_k127_4175972_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000003144 153.0
CMS1_k127_4175972_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 390.0
CMS1_k127_4175972_20 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000002478 142.0
CMS1_k127_4175972_21 ribosomal protein L30 K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000003682 86.0
CMS1_k127_4175972_22 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000001583 73.0
CMS1_k127_4175972_23 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000002277 80.0
CMS1_k127_4175972_24 cellulase activity - - - 0.000000000008395 74.0
CMS1_k127_4175972_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 349.0
CMS1_k127_4175972_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 315.0
CMS1_k127_4175972_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 301.0
CMS1_k127_4175972_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002643 265.0
CMS1_k127_4175972_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005562 257.0
CMS1_k127_4175972_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003008 230.0
CMS1_k127_4175972_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000803 226.0
CMS1_k127_4348274_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1024.0
CMS1_k127_4348274_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.979e-305 951.0
CMS1_k127_4348274_10 nUDIX hydrolase K01515,K03574,K19710 - 2.7.7.53,3.6.1.13,3.6.1.55 0.00000000000000000000000000000000000000000000000000000000001282 210.0
CMS1_k127_4348274_11 Redoxin - - - 0.000000000000000000000000000000000000000000000000004555 185.0
CMS1_k127_4348274_12 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000001271 168.0
CMS1_k127_4348274_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000009597 147.0
CMS1_k127_4348274_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000005381 132.0
CMS1_k127_4348274_15 COGs COG0790 FOG TPR repeat SEL1 subfamily - - - 0.000000000000000000000000004891 125.0
CMS1_k127_4348274_16 CHAD - - - 0.0000000000000000004501 100.0
CMS1_k127_4348274_17 - - - - 0.00000007254 60.0
CMS1_k127_4348274_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 7.258e-283 893.0
CMS1_k127_4348274_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.058e-242 761.0
CMS1_k127_4348274_4 Participates in both transcription termination and antitermination K02600 - - 1.327e-224 706.0
CMS1_k127_4348274_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 593.0
CMS1_k127_4348274_6 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341,K05559 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 415.0
CMS1_k127_4348274_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 398.0
CMS1_k127_4348274_8 PFAM Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 351.0
CMS1_k127_4348274_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001867 281.0
CMS1_k127_4484665_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.0 1318.0
CMS1_k127_4484665_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0 1127.0
CMS1_k127_4484665_2 reductase chain B K07307 - - 1.811e-205 655.0
CMS1_k127_4484665_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 548.0
CMS1_k127_4484665_4 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.0000000000000000000000000000000000000000000596 166.0
CMS1_k127_4517231_0 protein alpha chain K02586 - 1.18.6.1 1.569e-302 930.0
CMS1_k127_4517231_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.604e-302 932.0
CMS1_k127_4517231_10 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 502.0
CMS1_k127_4517231_11 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 459.0
CMS1_k127_4517231_12 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 409.0
CMS1_k127_4517231_13 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 401.0
CMS1_k127_4517231_14 Leucine Rich Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 321.0
CMS1_k127_4517231_15 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 329.0
CMS1_k127_4517231_16 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 302.0
CMS1_k127_4517231_17 PFAM ABC transporter K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 312.0
CMS1_k127_4517231_18 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 305.0
CMS1_k127_4517231_19 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001057 279.0
CMS1_k127_4517231_2 TIGRFAM Nitrogenase cofactor biosynthesis protein NifB K02585 - - 5.04e-266 830.0
CMS1_k127_4517231_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000207 278.0
CMS1_k127_4517231_21 transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002488 265.0
CMS1_k127_4517231_22 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008678 245.0
CMS1_k127_4517231_23 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000000000000000000000001975 235.0
CMS1_k127_4517231_24 Protein of unknown function, DUF269 - - - 0.000000000000000000000000000000000000000000000000000000000000005041 220.0
CMS1_k127_4517231_25 NifQ K15790 - - 0.000000000000000000000000000000000000000000000000000000001406 207.0
CMS1_k127_4517231_26 Molybdenum ABC transporter periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000001538 207.0
CMS1_k127_4517231_27 helix_turn_helix ASNC type K05800 GO:0000096,GO:0000098,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006351,GO:0006355,GO:0006520,GO:0006534,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009063,GO:0009069,GO:0009071,GO:0009093,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016054,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0043200,GO:0043254,GO:0043436,GO:0043565,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046395,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901698,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000004472 199.0
CMS1_k127_4517231_28 PFAM Dinitrogenase iron-molybdenum cofactor K02596 - - 0.0000000000000000000000000000000000000000000000000000001689 199.0
CMS1_k127_4517231_29 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000001004 184.0
CMS1_k127_4517231_3 Belongs to the NifD NifK NifE NifN family K02587 - - 1.337e-264 820.0
CMS1_k127_4517231_30 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000002397 171.0
CMS1_k127_4517231_31 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000001592 169.0
CMS1_k127_4517231_32 Ferredoxin - - - 0.000000000000000000000000000000000000000007927 156.0
CMS1_k127_4517231_33 TIGRFAM ferredoxin III - - - 0.00000000000000000000000000000000000000001601 158.0
CMS1_k127_4517231_34 acetyltransferase - - - 0.0000000000000000000000000000000000000006344 155.0
CMS1_k127_4517231_35 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000000000004451 143.0
CMS1_k127_4517231_36 CoA-binding domain protein K09181 - - 0.000000000000000000000000000000000002929 144.0
CMS1_k127_4517231_37 ArsC family - - - 0.00000000000000000000000000000000004527 141.0
CMS1_k127_4517231_38 NifZ domain K02597 - - 0.000000000000000000000000000001695 122.0
CMS1_k127_4517231_39 PFAM NifT FixU K02593 - - 0.00000000000000000000000000001312 121.0
CMS1_k127_4517231_4 Fis Family K02584 - - 4.498e-237 747.0
CMS1_k127_4517231_40 - - - - 0.0000000000000000000000000001177 127.0
CMS1_k127_4517231_41 PFAM Positive regulator of sigma(E), RseC MucC K03803 - - 0.0000000000000000000000000005284 121.0
CMS1_k127_4517231_42 PFAM 4Fe-4S binding domain - - - 0.0000000000000000000000000005669 117.0
CMS1_k127_4517231_43 Tetratricopeptide repeat - - - 0.00000000000000000000000000333 124.0
CMS1_k127_4517231_44 Rop-like - - - 0.00000000000000000000000007625 108.0
CMS1_k127_4517231_45 - - - - 0.00000000000000002702 84.0
CMS1_k127_4517231_46 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000001444 67.0
CMS1_k127_4517231_47 PFAM Hemerythrin HHE cation binding domain protein - - - 0.000000001938 59.0
CMS1_k127_4517231_48 17 kDa outer membrane surface antigen - - - 0.0000000291 61.0
CMS1_k127_4517231_49 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.0006326 49.0
CMS1_k127_4517231_5 Part of a membrane complex involved in electron transport K03615 - - 1.263e-228 721.0
CMS1_k127_4517231_6 PFAM flavodoxin nitric oxide synthase K12264,K22405 - 1.6.3.4 5.041e-219 687.0
CMS1_k127_4517231_7 Belongs to the NifD NifK NifE NifN family K02592 - - 1.527e-211 667.0
CMS1_k127_4517231_8 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 546.0
CMS1_k127_4517231_9 nitrogen fixation negative regulator NifL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 513.0
CMS1_k127_4518711_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.549e-305 951.0
CMS1_k127_4518711_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.946e-257 805.0
CMS1_k127_4518711_2 type IV pilus assembly PilZ K00694 - 2.4.1.12 3.385e-225 720.0
CMS1_k127_4518711_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 543.0
CMS1_k127_4518711_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 372.0
CMS1_k127_4518711_5 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000001033 237.0
CMS1_k127_4518711_6 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000001496 205.0
CMS1_k127_4518711_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000007599 198.0
CMS1_k127_4518711_8 Cellulose biosynthesis protein BcsS - - - 0.0000000000000000000000000000000444 135.0
CMS1_k127_4518711_9 TIGRFAM Diguanylate cyclase - - - 0.0000000000007907 70.0
CMS1_k127_4530972_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 606.0
CMS1_k127_4530972_1 PUA-like domain K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 489.0
CMS1_k127_4530972_10 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000003721 240.0
CMS1_k127_4530972_11 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000001243 186.0
CMS1_k127_4530972_12 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000008496 179.0
CMS1_k127_4530972_13 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000004915 174.0
CMS1_k127_4530972_14 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000013 113.0
CMS1_k127_4530972_15 - - - - 0.00000000000000000000131 102.0
CMS1_k127_4530972_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 492.0
CMS1_k127_4530972_3 Soluble lytic murein transglycosylase L domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 441.0
CMS1_k127_4530972_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 409.0
CMS1_k127_4530972_5 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 384.0
CMS1_k127_4530972_6 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 361.0
CMS1_k127_4530972_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 330.0
CMS1_k127_4530972_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001665 257.0
CMS1_k127_4530972_9 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
CMS1_k127_4532072_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 8.131e-289 910.0
CMS1_k127_4532072_1 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 353.0
CMS1_k127_4532072_10 amine dehydrogenase activity K08282,K08884 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009405,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010565,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0030145,GO:0030312,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0032091,GO:0033554,GO:0036211,GO:0042304,GO:0042594,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043393,GO:0043412,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051100,GO:0051704,GO:0051716,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000000000000000000000000001965 136.0
CMS1_k127_4532072_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000003634 124.0
CMS1_k127_4532072_12 - - - - 0.000000000003039 75.0
CMS1_k127_4532072_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000371 265.0
CMS1_k127_4532072_3 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001131 242.0
CMS1_k127_4532072_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000002375 211.0
CMS1_k127_4532072_5 ResB-like family K07399 - - 0.00000000000000000000000000000000000000000000000000000000000562 220.0
CMS1_k127_4532072_6 - - - - 0.000000000000000000000000000000000000000000000000002141 193.0
CMS1_k127_4532072_7 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000005455 192.0
CMS1_k127_4532072_8 photosynthesis - - - 0.0000000000000000000000000000000000000000000000003175 179.0
CMS1_k127_4532072_9 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000002947 137.0
CMS1_k127_4551346_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1207.0
CMS1_k127_4551346_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.204e-289 899.0
CMS1_k127_4551346_10 ATP synthase A chain K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 420.0
CMS1_k127_4551346_11 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 354.0
CMS1_k127_4551346_12 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 327.0
CMS1_k127_4551346_13 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 285.0
CMS1_k127_4551346_14 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000004308 256.0
CMS1_k127_4551346_15 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000002041 209.0
CMS1_k127_4551346_16 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000003922 202.0
CMS1_k127_4551346_17 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000004654 200.0
CMS1_k127_4551346_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000002274 187.0
CMS1_k127_4551346_19 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000000007072 171.0
CMS1_k127_4551346_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.331e-282 871.0
CMS1_k127_4551346_20 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000003888 134.0
CMS1_k127_4551346_21 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000000401 124.0
CMS1_k127_4551346_22 transcriptional regulator - - - 0.0000000000000000000000000001829 123.0
CMS1_k127_4551346_23 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000005863 112.0
CMS1_k127_4551346_24 Ribosomal protein L34 K02914 - - 0.00000000000002176 73.0
CMS1_k127_4551346_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.135e-207 652.0
CMS1_k127_4551346_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 2.004e-195 625.0
CMS1_k127_4551346_5 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 597.0
CMS1_k127_4551346_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 521.0
CMS1_k127_4551346_7 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 498.0
CMS1_k127_4551346_8 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 442.0
CMS1_k127_4551346_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 422.0
CMS1_k127_4571175_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.0 1090.0
CMS1_k127_4571175_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 1.263e-268 840.0
CMS1_k127_4571175_10 Cytosol aminopeptidase family, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 424.0
CMS1_k127_4571175_11 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 350.0
CMS1_k127_4571175_12 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 336.0
CMS1_k127_4571175_13 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 301.0
CMS1_k127_4571175_14 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000002215 242.0
CMS1_k127_4571175_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000002437 218.0
CMS1_k127_4571175_16 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000005715 189.0
CMS1_k127_4571175_17 - - - - 0.0000000000000000000000000000000000000000000000000001586 190.0
CMS1_k127_4571175_18 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000004101 169.0
CMS1_k127_4571175_19 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000000001356 128.0
CMS1_k127_4571175_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.333e-227 708.0
CMS1_k127_4571175_20 CopG antitoxin of type II toxin-antitoxin system - - - 0.000000000000000000000678 98.0
CMS1_k127_4571175_21 Protein of unknown function (DUF3617) - - - 0.00003679 52.0
CMS1_k127_4571175_22 - - - - 0.000102 53.0
CMS1_k127_4571175_3 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 1.692e-217 686.0
CMS1_k127_4571175_4 PFAM sodium alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 606.0
CMS1_k127_4571175_5 Transketolase, pyrimidine binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 559.0
CMS1_k127_4571175_6 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 556.0
CMS1_k127_4571175_7 Dehydrogenase E1 component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 515.0
CMS1_k127_4571175_8 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 495.0
CMS1_k127_4571175_9 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 454.0
CMS1_k127_4596701_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1817.0
CMS1_k127_4596701_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 5.196e-204 643.0
CMS1_k127_4596701_2 AAA ATPase, central domain protein K07478 - - 5.64e-198 625.0
CMS1_k127_4596701_3 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 380.0
CMS1_k127_4596701_4 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 321.0
CMS1_k127_4596701_5 Cyclic nucleotide-monophosphate binding domain K01420 - - 0.00000000000000000000000000000000000000000000000000001063 196.0
CMS1_k127_4596701_6 surface antigen - - - 0.00000000000000000000000000000000000000000000277 173.0
CMS1_k127_4596701_7 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000001905 162.0
CMS1_k127_4596701_8 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000000000001053 151.0
CMS1_k127_4596701_9 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000002454 123.0
CMS1_k127_4674543_0 Bifunctional purine biosynthesis protein PurH K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 7.023e-246 770.0
CMS1_k127_4674543_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 5.425e-233 733.0
CMS1_k127_4674543_10 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000001017 209.0
CMS1_k127_4674543_11 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000006616 195.0
CMS1_k127_4674543_12 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000666 193.0
CMS1_k127_4674543_13 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000000000000005409 156.0
CMS1_k127_4674543_14 Type II secretion system protein C - - - 0.00000000000000000000000000000000000009103 153.0
CMS1_k127_4674543_15 Belongs to the transcriptional regulatory Fis family K03557 GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0032991,GO:0032993,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815 - 0.0000000000000004982 82.0
CMS1_k127_4674543_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.841e-233 724.0
CMS1_k127_4674543_3 general secretion pathway protein D K02453 - - 1.216e-202 650.0
CMS1_k127_4674543_4 Belongs to the GARS family K01945 - 6.3.4.13 6.264e-199 627.0
CMS1_k127_4674543_5 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0019904,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0090304,GO:0097718,GO:0140098,GO:1901360,GO:1901361,GO:1901575 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 569.0
CMS1_k127_4674543_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 465.0
CMS1_k127_4674543_7 PFAM Type II secretion system protein E K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 404.0
CMS1_k127_4674543_8 Heat shock protein HtpX K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 400.0
CMS1_k127_4674543_9 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 302.0
CMS1_k127_4700782_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1443.0
CMS1_k127_4700782_1 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 1.657e-318 994.0
CMS1_k127_4700782_10 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 400.0
CMS1_k127_4700782_11 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 396.0
CMS1_k127_4700782_12 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 381.0
CMS1_k127_4700782_13 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 379.0
CMS1_k127_4700782_14 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 359.0
CMS1_k127_4700782_15 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 361.0
CMS1_k127_4700782_16 TIGRFAM HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 339.0
CMS1_k127_4700782_17 PfkB domain protein K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 325.0
CMS1_k127_4700782_18 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 309.0
CMS1_k127_4700782_19 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0000287,GO:0003674,GO:0003824,GO:0004349,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019202,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0055129,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901973 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 308.0
CMS1_k127_4700782_2 Alpha amylase catalytic K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 1.377e-299 925.0
CMS1_k127_4700782_20 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001042 272.0
CMS1_k127_4700782_21 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003771 259.0
CMS1_k127_4700782_22 ADP-Ribose Pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001387 247.0
CMS1_k127_4700782_23 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000807 231.0
CMS1_k127_4700782_24 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000002057 230.0
CMS1_k127_4700782_25 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000001066 217.0
CMS1_k127_4700782_26 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000004705 205.0
CMS1_k127_4700782_27 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000009583 219.0
CMS1_k127_4700782_28 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000001915 205.0
CMS1_k127_4700782_29 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000004382 202.0
CMS1_k127_4700782_3 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 3.341e-197 623.0
CMS1_k127_4700782_30 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000001444 198.0
CMS1_k127_4700782_31 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000000000000000000000001157 203.0
CMS1_k127_4700782_32 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000002046 188.0
CMS1_k127_4700782_33 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000006192 192.0
CMS1_k127_4700782_34 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000003116 186.0
CMS1_k127_4700782_35 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000000004417 165.0
CMS1_k127_4700782_36 belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000000000001001 164.0
CMS1_k127_4700782_37 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000001505 154.0
CMS1_k127_4700782_38 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.000000000000000000000000000000000001102 149.0
CMS1_k127_4700782_39 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000000000000000000000000000000002903 143.0
CMS1_k127_4700782_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 565.0
CMS1_k127_4700782_40 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.000000000000000000000000000000000002937 139.0
CMS1_k127_4700782_41 Psort location Extracellular, score - - - 0.0000000000000000000000000000001763 127.0
CMS1_k127_4700782_42 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000002701 113.0
CMS1_k127_4700782_43 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000000001815 114.0
CMS1_k127_4700782_44 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.00000000000000000000000004986 115.0
CMS1_k127_4700782_45 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000001082 108.0
CMS1_k127_4700782_46 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000002443 102.0
CMS1_k127_4700782_47 Type IV pilus biogenesis protein K02655 - - 0.000000000000001427 86.0
CMS1_k127_4700782_48 P COG0025 NhaP-type Na H and K H antiporters K11747 - - 0.000000000000001647 85.0
CMS1_k127_4700782_49 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000471 78.0
CMS1_k127_4700782_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 491.0
CMS1_k127_4700782_50 protein conserved in bacteria K09908 - - 0.00000000006869 70.0
CMS1_k127_4700782_51 type IV pilus modification protein PilV K02671 - - 0.0000000005616 67.0
CMS1_k127_4700782_52 - - - - 0.0000001901 54.0
CMS1_k127_4700782_54 PilX N-terminal - - - 0.00001431 58.0
CMS1_k127_4700782_55 - - - - 0.00002161 46.0
CMS1_k127_4700782_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 473.0
CMS1_k127_4700782_7 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 473.0
CMS1_k127_4700782_8 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 439.0
CMS1_k127_4700782_9 TIGRFAM TIGR03790 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 403.0
CMS1_k127_4758241_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1276.0
CMS1_k127_4758241_1 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0 1079.0
CMS1_k127_4758241_10 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 289.0
CMS1_k127_4758241_11 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003475 255.0
CMS1_k127_4758241_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000155 219.0
CMS1_k127_4758241_13 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000002188 199.0
CMS1_k127_4758241_14 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000001034 183.0
CMS1_k127_4758241_15 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000005898 195.0
CMS1_k127_4758241_16 Protein of unknown function (DUF489) K07153 - - 0.000000000000000000000000000000000000000002234 165.0
CMS1_k127_4758241_17 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000001251 155.0
CMS1_k127_4758241_18 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000001836 141.0
CMS1_k127_4758241_19 protein acetylation K02348 - - 0.00000000000000000000000000000000001172 141.0
CMS1_k127_4758241_2 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 3.688e-229 714.0
CMS1_k127_4758241_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 5.173e-217 681.0
CMS1_k127_4758241_4 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 550.0
CMS1_k127_4758241_5 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 522.0
CMS1_k127_4758241_6 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 481.0
CMS1_k127_4758241_7 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 461.0
CMS1_k127_4758241_8 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 455.0
CMS1_k127_4758241_9 Leucyl/phenylalanyl-tRNA protein transferase K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 287.0
CMS1_k127_4774719_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 GO:0003674,GO:0003824,GO:0005488,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010467,GO:0016740,GO:0016741,GO:0016743,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0046944,GO:0051604,GO:0071704,GO:1901564 - 1.445e-270 852.0
CMS1_k127_4774719_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 592.0
CMS1_k127_4774719_10 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001574 263.0
CMS1_k127_4774719_11 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007152 248.0
CMS1_k127_4774719_12 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000001267 231.0
CMS1_k127_4774719_13 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.000000000000000000000000000000000000000000000000000001563 196.0
CMS1_k127_4774719_14 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000003458 189.0
CMS1_k127_4774719_15 - - - - 0.000000000000000000000000000000000000000000000001212 189.0
CMS1_k127_4774719_16 - - - - 0.000000000000000000000000000000000000000001889 164.0
CMS1_k127_4774719_17 - - - - 0.0000000000000000000000000000001678 131.0
CMS1_k127_4774719_18 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000001135 119.0
CMS1_k127_4774719_19 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000001174 110.0
CMS1_k127_4774719_2 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 593.0
CMS1_k127_4774719_20 - - - - 0.00000000000000000000001043 105.0
CMS1_k127_4774719_21 Phospholipase_D-nuclease N-terminal - - - 0.00000000000000000002463 92.0
CMS1_k127_4774719_23 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000007876 59.0
CMS1_k127_4774719_24 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00002573 54.0
CMS1_k127_4774719_25 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00002699 54.0
CMS1_k127_4774719_3 Hydrogenase formation hypA family K04654 GO:0003674,GO:0005488,GO:0005506,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0036211,GO:0042165,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0070025,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 590.0
CMS1_k127_4774719_4 CobW/HypB/UreG, nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 498.0
CMS1_k127_4774719_5 AIR synthase related protein, N-terminal domain K04655 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0018193,GO:0018198,GO:0018249,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046892,GO:0051604,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 513.0
CMS1_k127_4774719_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 467.0
CMS1_k127_4774719_7 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 447.0
CMS1_k127_4774719_8 HPP family K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 349.0
CMS1_k127_4774719_9 Hydrogenase maturation protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000177 273.0
CMS1_k127_4791017_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1403.0
CMS1_k127_4791017_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1050.0
CMS1_k127_4791017_10 - - - - 0.0000000000000000000000000000007981 124.0
CMS1_k127_4791017_11 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000000005389 100.0
CMS1_k127_4791017_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000002449 107.0
CMS1_k127_4791017_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.179e-274 866.0
CMS1_k127_4791017_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 510.0
CMS1_k127_4791017_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 400.0
CMS1_k127_4791017_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000002285 233.0
CMS1_k127_4791017_6 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000145 223.0
CMS1_k127_4791017_7 PFAM regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000000000000000000005102 205.0
CMS1_k127_4791017_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000165 190.0
CMS1_k127_4791017_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000003098 159.0
CMS1_k127_4848004_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 462.0
CMS1_k127_4848004_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 449.0
CMS1_k127_4848004_10 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000008711 178.0
CMS1_k127_4848004_11 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000000002679 165.0
CMS1_k127_4848004_12 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000003556 139.0
CMS1_k127_4848004_13 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.000000000000000000000000000000002523 138.0
CMS1_k127_4848004_14 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000003189 130.0
CMS1_k127_4848004_15 - - - - 0.00000000000000000000000000001525 122.0
CMS1_k127_4848004_16 Signal transduction histidine kinase K15011 - 2.7.13.3 0.000000000000000000000004584 106.0
CMS1_k127_4848004_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 433.0
CMS1_k127_4848004_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 404.0
CMS1_k127_4848004_4 AI-2E family transporter K03548 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 400.0
CMS1_k127_4848004_5 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 331.0
CMS1_k127_4848004_6 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 333.0
CMS1_k127_4848004_7 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 317.0
CMS1_k127_4848004_8 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000000000000000000000000000000000072 243.0
CMS1_k127_4848004_9 COG1225 Peroxiredoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000001151 228.0
CMS1_k127_4860897_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 9.894e-223 719.0
CMS1_k127_4860897_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 595.0
CMS1_k127_4860897_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 566.0
CMS1_k127_4860897_3 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.0000000000000000000000000000000000002367 147.0
CMS1_k127_4860897_4 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000000007193 133.0
CMS1_k127_4860897_5 COG0457 FOG TPR repeat - - - 0.000000000000000000003962 96.0
CMS1_k127_4867884_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K18138 - - 0.0 1598.0
CMS1_k127_4867884_1 Proton-conducting membrane transporter K05568 - - 2.4e-262 818.0
CMS1_k127_4867884_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 415.0
CMS1_k127_4867884_11 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 343.0
CMS1_k127_4867884_12 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 300.0
CMS1_k127_4867884_13 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003662 267.0
CMS1_k127_4867884_14 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005142 262.0
CMS1_k127_4867884_15 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005254 255.0
CMS1_k127_4867884_16 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000008152 237.0
CMS1_k127_4867884_17 COG2111 Multisubunit Na H antiporter, MnhB subunit K05566 - - 0.000000000000000000000000000000000000000000000000000000000000000001534 236.0
CMS1_k127_4867884_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002654 243.0
CMS1_k127_4867884_19 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000004281 213.0
CMS1_k127_4867884_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 3.01e-259 805.0
CMS1_k127_4867884_20 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000001998 200.0
CMS1_k127_4867884_21 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000005663 193.0
CMS1_k127_4867884_22 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.000000000000000000000000000000000000000000000005234 182.0
CMS1_k127_4867884_23 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000001545 181.0
CMS1_k127_4867884_24 Na+/H+ ion antiporter subunit K05569 - - 0.00000000000000000000000000000005412 137.0
CMS1_k127_4867884_25 Na+/H+ antiporter subunit K05571 - - 0.00000000000000000000000000000009988 127.0
CMS1_k127_4867884_26 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000000000009521 117.0
CMS1_k127_4867884_27 ABC-2 family transporter protein K19341 - - 0.000000000000000000000001568 104.0
CMS1_k127_4867884_28 - - - - 0.00000000000000000000008388 105.0
CMS1_k127_4867884_29 - - - - 0.00000000000000000001684 100.0
CMS1_k127_4867884_3 Citrate transporter - - - 8.033e-235 734.0
CMS1_k127_4867884_4 Single-stranded-DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 4.44e-218 698.0
CMS1_k127_4867884_5 Proton-conducting membrane transporter K05568 - - 3.163e-207 661.0
CMS1_k127_4867884_6 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 2.246e-194 612.0
CMS1_k127_4867884_7 Proton-conducting membrane transporter K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 596.0
CMS1_k127_4867884_8 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 549.0
CMS1_k127_4867884_9 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 484.0
CMS1_k127_4868580_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.409e-251 781.0
CMS1_k127_4868580_1 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 593.0
CMS1_k127_4868580_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000003476 227.0
CMS1_k127_4868580_3 Transcriptional regulatory protein, C terminal K07670 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016310,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000003058 192.0
CMS1_k127_4868580_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000001889 81.0
CMS1_k127_4906379_0 UPF0313 protein - - - 0.0 1146.0
CMS1_k127_4906379_1 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 8.675e-231 723.0
CMS1_k127_4906379_10 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000000000004857 146.0
CMS1_k127_4906379_11 Cytidylate kinase-like family - - - 0.00000000000000000000000000000004672 141.0
CMS1_k127_4906379_12 - - - - 0.00000000000000000000859 104.0
CMS1_k127_4906379_13 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.00000000000000000001138 97.0
CMS1_k127_4906379_15 2Fe-2S -binding K07303 - 1.3.99.16 0.00000000000003637 79.0
CMS1_k127_4906379_16 - - - - 0.00000000000008637 76.0
CMS1_k127_4906379_17 Outer membrane lipoprotein K07285 - - 0.0000000000466 65.0
CMS1_k127_4906379_2 Beta-lactamase superfamily domain K00784 - 3.1.26.11 9.088e-204 653.0
CMS1_k127_4906379_3 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 369.0
CMS1_k127_4906379_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 308.0
CMS1_k127_4906379_5 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008655 278.0
CMS1_k127_4906379_6 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003537 274.0
CMS1_k127_4906379_7 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001332 262.0
CMS1_k127_4906379_8 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000001998 193.0
CMS1_k127_4906379_9 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000007399 168.0
CMS1_k127_4921406_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 2.164e-201 634.0
CMS1_k127_4921406_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 500.0
CMS1_k127_4921406_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 398.0
CMS1_k127_4921406_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 364.0
CMS1_k127_4921406_4 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003415 237.0
CMS1_k127_4921406_5 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000001328 177.0
CMS1_k127_4921406_6 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000001245 141.0
CMS1_k127_4921406_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000001703 98.0
CMS1_k127_4921406_8 TIGRFAM TIGR02449 family protein K09892 - - 0.00000000001301 68.0
CMS1_k127_4922092_0 Bacterial protein of unknown function (DUF898) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 330.0
CMS1_k127_4922092_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
CMS1_k127_4922092_2 - - - - 0.00000000000000000000000000000000006097 136.0
CMS1_k127_4922092_3 PFAM peptidylprolyl isomerase FKBP-type K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000004298 128.0
CMS1_k127_4922092_4 a CheY-like receiver domain and an HD-GYP domain K07814,K13815 - - 0.00000000000000000000000002188 113.0
CMS1_k127_4922092_5 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000001858 85.0
CMS1_k127_4922092_6 CoA-binding domain protein - - - 0.000191 50.0
CMS1_k127_4983471_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 5.658e-199 634.0
CMS1_k127_4983471_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 464.0
CMS1_k127_4983471_2 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 368.0
CMS1_k127_4983471_3 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000002017 239.0
CMS1_k127_4983471_4 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000008072 241.0
CMS1_k127_4983471_5 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000005637 202.0
CMS1_k127_4983471_6 AIG2-like family - - - 0.00000000000000000000000000000000000000002639 160.0
CMS1_k127_4983471_7 Protein of unknown function (DUF3175) - - - 0.00000000000000000000000000000000002051 137.0
CMS1_k127_5049576_0 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 533.0
CMS1_k127_5049576_1 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 393.0
CMS1_k127_5049576_2 PAP2 (Acid phosphatase) superfamily protein - - - 0.000000000000000000000000000000000000000000000008687 183.0
CMS1_k127_5049576_3 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000001385 168.0
CMS1_k127_5049576_4 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000002498 162.0
CMS1_k127_5049576_5 DoxX K15977 - - 0.0000000000000000000000000000000000000001475 154.0
CMS1_k127_5049576_6 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000005491 143.0
CMS1_k127_5049576_7 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000000000001389 121.0
CMS1_k127_5049576_8 Transcriptional regulator - - - 0.0001358 49.0
CMS1_k127_5126779_0 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 - 4.1.1.38 0.0 1752.0
CMS1_k127_5126779_1 GTP-binding protein TypA K06207 - - 2.636e-319 985.0
CMS1_k127_5126779_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001034 284.0
CMS1_k127_5126779_11 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004636 254.0
CMS1_k127_5126779_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002201 233.0
CMS1_k127_5126779_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000009548 221.0
CMS1_k127_5126779_14 Outer Membrane Lipoprotein - GO:0008150,GO:0043900,GO:0050789,GO:0050794,GO:0065007,GO:1900190 - 0.00000000000000000000000000000000000000000000000000000000000008879 220.0
CMS1_k127_5126779_15 Copper resistance protein D - - - 0.00000000000000000000000000000000000000000000000000000003452 201.0
CMS1_k127_5126779_16 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000000000000000000000000000000001429 192.0
CMS1_k127_5126779_17 Elongation factor P K02356 - - 0.00000000000000000000000000000000000000000000000000004119 199.0
CMS1_k127_5126779_18 - - - - 0.00000000000000000000000000000000000000000000000000286 190.0
CMS1_k127_5126779_19 Peptidyl-prolyl cis-trans K03775 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010467,GO:0016151,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022417,GO:0031647,GO:0035821,GO:0036211,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043963,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044501,GO:0046872,GO:0046914,GO:0050821,GO:0050896,GO:0050897,GO:0051082,GO:0051604,GO:0051701,GO:0051704,GO:0051817,GO:0052027,GO:0052250,GO:0065007,GO:0065008,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000000000000000000000000004204 189.0
CMS1_k127_5126779_2 ABC transporter K15738 - - 1.384e-231 732.0
CMS1_k127_5126779_20 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000000001844 177.0
CMS1_k127_5126779_21 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000001497 151.0
CMS1_k127_5126779_22 CbiX K03794 - 4.99.1.4 0.000000000000000000000000000000005181 133.0
CMS1_k127_5126779_23 Cold shock K03704 - - 0.00000000000000000000000000001679 117.0
CMS1_k127_5126779_24 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000001088 117.0
CMS1_k127_5126779_25 - - - - 0.000000000000000000000000003031 117.0
CMS1_k127_5126779_26 - - - - 0.00000000000000000000000006776 120.0
CMS1_k127_5126779_27 - - - - 0.0000000000000000000000005911 105.0
CMS1_k127_5126779_28 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000001998 97.0
CMS1_k127_5126779_29 - - - - 0.00000000000000000005229 92.0
CMS1_k127_5126779_3 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 507.0
CMS1_k127_5126779_30 - - - - 0.0000000000000000004398 88.0
CMS1_k127_5126779_31 Belongs to the ompA family K03286 - - 0.0000000000002768 75.0
CMS1_k127_5126779_32 - - - - 0.000000000001138 70.0
CMS1_k127_5126779_34 Protein of unknown function (DUF2384) - - - 0.000000000594 66.0
CMS1_k127_5126779_36 - - - - 0.00000000421 60.0
CMS1_k127_5126779_37 Fibronectin type III domain protein - - - 0.0000006139 63.0
CMS1_k127_5126779_39 COG3710 DNA-binding winged-HTH domains K10921 GO:0000156,GO:0000160,GO:0003674,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009405,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0044419,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051704,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0006968 44.0
CMS1_k127_5126779_4 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 417.0
CMS1_k127_5126779_5 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 404.0
CMS1_k127_5126779_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 349.0
CMS1_k127_5126779_7 PFAM metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 339.0
CMS1_k127_5126779_8 May be involved in recombination K03554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 291.0
CMS1_k127_5126779_9 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006823 287.0
CMS1_k127_514551_0 PFAM von Willebrand factor type A - - - 0.0 1089.0
CMS1_k127_514551_1 Citrate transporter - - - 5.617e-294 916.0
CMS1_k127_514551_2 PFAM Citrate transporter - - - 6.983e-213 670.0
CMS1_k127_514551_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 405.0
CMS1_k127_514551_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000003759 196.0
CMS1_k127_514551_5 - - - - 0.000000000000000000000001165 110.0
CMS1_k127_5222597_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1200.0
CMS1_k127_5222597_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 8.584e-194 612.0
CMS1_k127_5222597_10 - K10716 - - 0.000000000000000000000000000000000000000000000000000000001658 206.0
CMS1_k127_5222597_11 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000007581 199.0
CMS1_k127_5222597_12 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000001983 186.0
CMS1_k127_5222597_13 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000009782 179.0
CMS1_k127_5222597_14 - - - - 0.0000000000000000000000000000000007351 135.0
CMS1_k127_5222597_15 - - - - 0.00000000000000000000000000000008516 140.0
CMS1_k127_5222597_16 - - - - 0.00000000000000000000000000000009311 130.0
CMS1_k127_5222597_17 SMART Cold shock protein K03704 - - 0.00000000000000000000000000003499 117.0
CMS1_k127_5222597_18 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K14160 - - 0.00000000000000000000000168 117.0
CMS1_k127_5222597_19 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.000000000000000000001185 100.0
CMS1_k127_5222597_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 465.0
CMS1_k127_5222597_22 - - - - 0.0000000000001035 80.0
CMS1_k127_5222597_23 - - - - 0.00000000001531 74.0
CMS1_k127_5222597_24 Esterase-like activity of phytase K01126 - 3.1.4.46 0.00001371 55.0
CMS1_k127_5222597_3 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 403.0
CMS1_k127_5222597_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 326.0
CMS1_k127_5222597_5 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 308.0
CMS1_k127_5222597_6 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003902 277.0
CMS1_k127_5222597_7 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000001157 231.0
CMS1_k127_5222597_8 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000008033 240.0
CMS1_k127_5222597_9 Acetyltransferase (GNAT) family K03824 - - 0.00000000000000000000000000000000000000000000000000000000000796 212.0
CMS1_k127_523780_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 536.0
CMS1_k127_523780_1 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 400.0
CMS1_k127_523780_10 - - - - 0.00000000000000000000000008817 109.0
CMS1_k127_523780_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000001786 87.0
CMS1_k127_523780_12 - - - - 0.0000000000000003185 87.0
CMS1_k127_523780_13 - - - - 0.00000000001761 66.0
CMS1_k127_523780_15 SMART Water Stress and Hypersensitive response domain protein - - - 0.0000000008423 70.0
CMS1_k127_523780_16 - - - - 0.000004342 55.0
CMS1_k127_523780_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 416.0
CMS1_k127_523780_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 343.0
CMS1_k127_523780_4 Protein of unknown function (DUF4238) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 321.0
CMS1_k127_523780_5 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000000000000000000000000000004896 175.0
CMS1_k127_523780_6 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000004814 170.0
CMS1_k127_523780_7 protein conserved in bacteria K07401 - - 0.000000000000000000000000000000000000000002596 158.0
CMS1_k127_523780_8 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000002131 121.0
CMS1_k127_523780_9 - - - - 0.0000000000000000000000000003706 121.0
CMS1_k127_5414973_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 516.0
CMS1_k127_5414973_1 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 471.0
CMS1_k127_5414973_10 cyclic nucleotide-binding K01420 - - 0.00000000000000000000000000000000000000000000000001168 188.0
CMS1_k127_5414973_11 Pyruvate kinase K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.0000000000000000000000000000000000000000000000001015 185.0
CMS1_k127_5414973_12 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000002526 91.0
CMS1_k127_5414973_13 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000009027 91.0
CMS1_k127_5414973_14 cellulase activity - - - 0.000000000002242 79.0
CMS1_k127_5414973_2 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 385.0
CMS1_k127_5414973_3 Amino Acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006845 363.0
CMS1_k127_5414973_4 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 325.0
CMS1_k127_5414973_5 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 295.0
CMS1_k127_5414973_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001368 280.0
CMS1_k127_5414973_7 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009148 252.0
CMS1_k127_5414973_8 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000007256 251.0
CMS1_k127_5414973_9 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000001513 217.0
CMS1_k127_54150_0 Ammonium transporter K03320 - - 1.717e-211 665.0
CMS1_k127_54150_1 Ammonium Transporter K03320 - - 1.716e-199 627.0
CMS1_k127_54150_2 Ammonium Transporter K03320 - - 2.341e-195 624.0
CMS1_k127_54150_3 Uncharacterised protein family (UPF0014) K02069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 335.0
CMS1_k127_54150_4 Pfam ABC - - - 0.0000000000000000000000000000000000000000000000000000000002315 209.0
CMS1_k127_54150_5 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000002519 202.0
CMS1_k127_54150_6 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000000005845 177.0
CMS1_k127_54150_7 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000004524 132.0
CMS1_k127_5471545_0 Nitrous oxidase accessory protein K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 574.0
CMS1_k127_5471545_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 456.0
CMS1_k127_5471545_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 438.0
CMS1_k127_5471545_3 PFAM Cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 347.0
CMS1_k127_5471545_4 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 353.0
CMS1_k127_5471545_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 346.0
CMS1_k127_5471545_6 ABC-2 family transporter protein K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 327.0
CMS1_k127_5471545_7 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 314.0
CMS1_k127_5471545_8 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000000000000000000000000000002254 128.0
CMS1_k127_5471545_9 NosL - - - 0.0000000000000000000000000007356 121.0
CMS1_k127_562755_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0003674,GO:0003824,GO:0004044,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0034641,GO:0034654,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.4.2.14 2.992e-245 765.0
CMS1_k127_562755_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.722e-245 762.0
CMS1_k127_562755_10 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 398.0
CMS1_k127_562755_11 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 348.0
CMS1_k127_562755_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 342.0
CMS1_k127_562755_13 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 346.0
CMS1_k127_562755_14 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 346.0
CMS1_k127_562755_15 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 323.0
CMS1_k127_562755_16 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 316.0
CMS1_k127_562755_17 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 295.0
CMS1_k127_562755_18 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 319.0
CMS1_k127_562755_19 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002293 275.0
CMS1_k127_562755_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 7.894e-219 683.0
CMS1_k127_562755_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001227 236.0
CMS1_k127_562755_21 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000248 229.0
CMS1_k127_562755_22 membrane protein, required for colicin V production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.00000000000000000000000000000000000000000000006708 174.0
CMS1_k127_562755_23 - - - - 0.00000000000000000000000000001003 128.0
CMS1_k127_562755_24 Sporulation related domain K03749 - - 0.000000000001403 76.0
CMS1_k127_562755_25 - - - - 0.00000008907 55.0
CMS1_k127_562755_26 - - - - 0.0000003413 53.0
CMS1_k127_562755_27 - - - - 0.0000009963 51.0
CMS1_k127_562755_28 - - - - 0.000002198 52.0
CMS1_k127_562755_29 - - - - 0.0001124 47.0
CMS1_k127_562755_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 3.561e-216 681.0
CMS1_k127_562755_4 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 6.191e-197 620.0
CMS1_k127_562755_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 563.0
CMS1_k127_562755_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 546.0
CMS1_k127_562755_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 443.0
CMS1_k127_562755_8 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 426.0
CMS1_k127_562755_9 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 411.0
CMS1_k127_5632010_0 Acyl-CoA synthetase (NDP forming) K09181 - - 1.936e-296 934.0
CMS1_k127_5632010_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.568e-270 845.0
CMS1_k127_5632010_10 Phasin protein - - - 0.000007772 53.0
CMS1_k127_5632010_2 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 561.0
CMS1_k127_5632010_3 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 504.0
CMS1_k127_5632010_4 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 361.0
CMS1_k127_5632010_5 TIGRFAM acetoacetyl-CoA reductase K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 330.0
CMS1_k127_5632010_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 285.0
CMS1_k127_5632010_7 TIGRFAM Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.0000000000000000000000000000000000000000000000002161 190.0
CMS1_k127_5632010_8 synthesis repressor, PhaR - - - 0.000000000000000000000000000000000000000000001264 169.0
CMS1_k127_5632010_9 periplasmic protein - - - 0.000000000000000000000004837 112.0
CMS1_k127_5640361_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 1.157e-299 934.0
CMS1_k127_5640361_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.559e-222 702.0
CMS1_k127_5640361_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000125 208.0
CMS1_k127_5640361_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000003346 121.0
CMS1_k127_5640361_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000002353 109.0
CMS1_k127_5671590_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 1.851e-282 878.0
CMS1_k127_5671590_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.54e-245 782.0
CMS1_k127_5671590_10 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 383.0
CMS1_k127_5671590_11 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 382.0
CMS1_k127_5671590_12 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 363.0
CMS1_k127_5671590_13 signal peptide peptidase SppA K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 355.0
CMS1_k127_5671590_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 339.0
CMS1_k127_5671590_15 Responsible for synthesis of pseudouridine from uracil K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 339.0
CMS1_k127_5671590_16 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 335.0
CMS1_k127_5671590_17 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 290.0
CMS1_k127_5671590_18 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 288.0
CMS1_k127_5671590_19 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002532 278.0
CMS1_k127_5671590_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 1.575e-243 759.0
CMS1_k127_5671590_20 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000006143 257.0
CMS1_k127_5671590_21 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001104 244.0
CMS1_k127_5671590_22 subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000001223 245.0
CMS1_k127_5671590_23 DNA polymerase III, delta' K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000006383 247.0
CMS1_k127_5671590_24 low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000001695 215.0
CMS1_k127_5671590_25 PilZ domain K02676 - - 0.00000000000000000000000000000000000000000000000000006421 188.0
CMS1_k127_5671590_26 Thioesterase superfamily protein K10806 - - 0.000000000000000000000000000000000000000000006731 175.0
CMS1_k127_5671590_27 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000002444 141.0
CMS1_k127_5671590_28 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000006819 134.0
CMS1_k127_5671590_29 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000001462 118.0
CMS1_k127_5671590_3 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 4.967e-232 734.0
CMS1_k127_5671590_30 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000231 103.0
CMS1_k127_5671590_31 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000006615 98.0
CMS1_k127_5671590_32 Ankyrin 3a K10380,K21440 GO:0000278,GO:0000281,GO:0000323,GO:0000902,GO:0000904,GO:0000910,GO:0001508,GO:0002028,GO:0003008,GO:0003254,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005783,GO:0005794,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0006810,GO:0006888,GO:0006892,GO:0006893,GO:0006928,GO:0006935,GO:0006996,GO:0007009,GO:0007010,GO:0007016,GO:0007049,GO:0007154,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008092,GO:0008104,GO:0008150,GO:0009605,GO:0009653,GO:0009893,GO:0009986,GO:0009987,GO:0010035,GO:0010038,GO:0010171,GO:0010256,GO:0010468,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010649,GO:0010650,GO:0010765,GO:0010959,GO:0010960,GO:0012505,GO:0014704,GO:0014731,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016328,GO:0016528,GO:0016529,GO:0019222,GO:0019226,GO:0019228,GO:0022008,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022898,GO:0023052,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030154,GO:0030155,GO:0030182,GO:0030315,GO:0030424,GO:0030425,GO:0030507,GO:0030674,GO:0031175,GO:0031594,GO:0031674,GO:0032026,GO:0032386,GO:0032388,GO:0032409,GO:0032410,GO:0032411,GO:0032412,GO:0032413,GO:0032414,GO:0032501,GO:0032502,GO:0032507,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0033036,GO:0033157,GO:0033267,GO:0033268,GO:0033270,GO:0033563,GO:0034110,GO:0034112,GO:0034613,GO:0034762,GO:0034763,GO:0034764,GO:0034765,GO:0034766,GO:0034767,GO:0035637,GO:0036477,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042221,GO:0042330,GO:0042383,GO:0042391,GO:0042592,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043034,GO:0043194,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043267,GO:0043269,GO:0043270,GO:0043271,GO:0043292,GO:0044085,GO:0044091,GO:0044092,GO:0044093,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045185,GO:0045202,GO:0045211,GO:0045296,GO:0045760,GO:0045785,GO:0045838,GO:0045927,GO:0046907,GO:0048193,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050808,GO:0050839,GO:0050877,GO:0050896,GO:0051049,GO:0051050,GO:0051051,GO:0051094,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051301,GO:0051641,GO:0051649,GO:0051651,GO:0051716,GO:0055065,GO:0055080,GO:0060090,GO:0060255,GO:0060341,GO:0061024,GO:0061564,GO:0061640,GO:0061951,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070727,GO:0070887,GO:0071241,GO:0071248,GO:0071286,GO:0071702,GO:0071705,GO:0071709,GO:0071840,GO:0071944,GO:0072507,GO:0072657,GO:0072658,GO:0072659,GO:0072660,GO:0090087,GO:0090150,GO:0090313,GO:0090314,GO:0090316,GO:0097060,GO:0097447,GO:0097458,GO:0097485,GO:0098590,GO:0098771,GO:0098794,GO:0098876,GO:0098900,GO:0098901,GO:0098902,GO:0099080,GO:0099081,GO:0099512,GO:0099612,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1900825,GO:1900827,GO:1901016,GO:1901017,GO:1901379,GO:1901380,GO:1902259,GO:1902260,GO:1902305,GO:1902307,GO:1903047,GO:1903533,GO:1903817,GO:1903827,GO:1903829,GO:1904062,GO:1904063,GO:1904064,GO:1904181,GO:1904951,GO:1905475,GO:1905477,GO:1990778,GO:2000649,GO:2000651,GO:2001257,GO:2001258,GO:2001259 - 0.000000000000524 78.0
CMS1_k127_5671590_4 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.738e-227 720.0
CMS1_k127_5671590_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.378e-195 616.0
CMS1_k127_5671590_6 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 569.0
CMS1_k127_5671590_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 529.0
CMS1_k127_5671590_8 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 505.0
CMS1_k127_5671590_9 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007504 429.0
CMS1_k127_5750856_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.767e-299 919.0
CMS1_k127_5750856_1 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 498.0
CMS1_k127_5750856_2 Transcriptional regulator, LysR K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 379.0
CMS1_k127_5750856_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 359.0
CMS1_k127_5750856_4 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000005859 231.0
CMS1_k127_5750856_5 Thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000003864 197.0
CMS1_k127_5750856_6 - - - - 0.0000000000000000000000000000000000000000000001613 180.0
CMS1_k127_5750856_7 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000005564 168.0
CMS1_k127_5750856_8 - - - - 0.00000000000000000000000000000006662 128.0
CMS1_k127_5750856_9 - - - - 0.00000000001972 66.0
CMS1_k127_5812109_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1137.0
CMS1_k127_5812109_1 PFAM Pyruvate kinase barrel K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 573.0
CMS1_k127_5812109_10 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000002318 183.0
CMS1_k127_5812109_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 499.0
CMS1_k127_5812109_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 494.0
CMS1_k127_5812109_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 391.0
CMS1_k127_5812109_5 Bile acid sodium symporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 364.0
CMS1_k127_5812109_6 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 362.0
CMS1_k127_5812109_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000007354 256.0
CMS1_k127_5812109_8 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000004874 253.0
CMS1_k127_5812109_9 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000006697 186.0
CMS1_k127_5867955_0 Transglycosylase - - - 5.253e-293 933.0
CMS1_k127_5867955_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 8.889e-269 838.0
CMS1_k127_5867955_10 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000001039 122.0
CMS1_k127_5867955_11 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000002156 113.0
CMS1_k127_5867955_12 PFAM RNA recognition motif - - - 0.00000000000000000000326 96.0
CMS1_k127_5867955_13 Uncharacterized ACR, COG1678 K07735 - - 0.000000000000000001395 94.0
CMS1_k127_5867955_14 META domain - - - 0.000000000001818 78.0
CMS1_k127_5867955_2 - - - - 2.5e-259 812.0
CMS1_k127_5867955_3 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 607.0
CMS1_k127_5867955_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 303.0
CMS1_k127_5867955_5 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 298.0
CMS1_k127_5867955_6 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001501 294.0
CMS1_k127_5867955_7 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 - - 0.000000000000000000000000000000000000000000000000000000000000001054 224.0
CMS1_k127_5867955_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000004424 209.0
CMS1_k127_5867955_9 O COG3187 Heat shock protein - - - 0.0000000000000000000000000000000000005357 147.0
CMS1_k127_5944480_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 537.0
CMS1_k127_5944480_1 sequence-specific DNA binding K02099,K13529,K15051,K18954 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000004277 222.0
CMS1_k127_5944480_2 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000001982 162.0
CMS1_k127_5944480_3 Cytochrome c mono- and diheme variants - - - 0.000000000000000000000000000001388 127.0
CMS1_k127_5944480_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000001033 78.0
CMS1_k127_6008326_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1299.0
CMS1_k127_6008326_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1118.0
CMS1_k127_6008326_10 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 448.0
CMS1_k127_6008326_11 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 430.0
CMS1_k127_6008326_12 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 399.0
CMS1_k127_6008326_13 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 376.0
CMS1_k127_6008326_14 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 364.0
CMS1_k127_6008326_15 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 346.0
CMS1_k127_6008326_16 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 342.0
CMS1_k127_6008326_17 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 332.0
CMS1_k127_6008326_18 PFAM HhH-GPD K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007653 271.0
CMS1_k127_6008326_19 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000569 259.0
CMS1_k127_6008326_2 Universal stress protein family K07090 - - 5.887e-275 859.0
CMS1_k127_6008326_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005906 253.0
CMS1_k127_6008326_21 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006772 266.0
CMS1_k127_6008326_22 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001411 245.0
CMS1_k127_6008326_23 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000003501 217.0
CMS1_k127_6008326_24 cyclic nucleotide-binding K01420 - - 0.000000000000000000000000000000000000000000000001021 183.0
CMS1_k127_6008326_25 domain, Protein - - - 0.00000000000000000000000000000000000000000000003357 196.0
CMS1_k127_6008326_26 - - - - 0.000000000000000000000000000000000000008357 153.0
CMS1_k127_6008326_27 Cupin - - - 0.000000000000000000000000000000000001173 148.0
CMS1_k127_6008326_28 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000001317 144.0
CMS1_k127_6008326_29 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00210,K00800 - 1.3.1.12,2.5.1.19 0.0000000000000000000000000000000003669 133.0
CMS1_k127_6008326_3 PFAM phosphate transporter K03306 - - 1.494e-230 724.0
CMS1_k127_6008326_31 Uncharacterized ArCR, COG1888 K09732 - - 0.000000000000000000000000000006006 123.0
CMS1_k127_6008326_32 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000002069 119.0
CMS1_k127_6008326_33 - - - - 0.000000000000000000000000001261 115.0
CMS1_k127_6008326_34 HxlR-like helix-turn-helix - - - 0.0000000000000002453 83.0
CMS1_k127_6008326_35 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000003332 78.0
CMS1_k127_6008326_36 COG0668 Small-conductance mechanosensitive channel K03442 - - 0.000003721 52.0
CMS1_k127_6008326_37 Transcriptional regulator - - - 0.00000511 51.0
CMS1_k127_6008326_38 - - - - 0.0000931 46.0
CMS1_k127_6008326_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 598.0
CMS1_k127_6008326_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 574.0
CMS1_k127_6008326_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 552.0
CMS1_k127_6008326_7 hemolysin activation secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 488.0
CMS1_k127_6008326_8 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 469.0
CMS1_k127_6008326_9 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 462.0
CMS1_k127_6034990_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 569.0
CMS1_k127_6034990_1 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000464 78.0
CMS1_k127_6051318_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.38e-317 987.0
CMS1_k127_6051318_1 PFAM Na Picotransporter K03324 - - 1.311e-240 757.0
CMS1_k127_6051318_10 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000003872 97.0
CMS1_k127_6051318_11 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.0000000001593 71.0
CMS1_k127_6051318_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 4.931e-228 721.0
CMS1_k127_6051318_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 590.0
CMS1_k127_6051318_4 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 414.0
CMS1_k127_6051318_5 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 359.0
CMS1_k127_6051318_6 negative regulation of phosphate transmembrane transport K01104,K02039,K03741 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 1.20.4.1,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 321.0
CMS1_k127_6051318_7 2-phosphoglycerate kinase K05715 - - 0.00000000000000000000000000000000000000000000000000002984 203.0
CMS1_k127_6051318_8 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000007237 161.0
CMS1_k127_6051318_9 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.0000000000000000000000000000000000000007279 160.0
CMS1_k127_6051474_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 8.715e-195 629.0
CMS1_k127_6051474_1 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 570.0
CMS1_k127_6051474_10 dihydroorotate dehydrogenase activity - - - 0.00024 55.0
CMS1_k127_6051474_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 434.0
CMS1_k127_6051474_3 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 398.0
CMS1_k127_6051474_4 Cupin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 307.0
CMS1_k127_6051474_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001771 239.0
CMS1_k127_6051474_6 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000005568 203.0
CMS1_k127_6051474_7 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000002354 131.0
CMS1_k127_6051474_8 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000005779 83.0
CMS1_k127_6051474_9 bacterial-type flagellum-dependent cell motility - - - 0.00000002675 68.0
CMS1_k127_6074356_0 Molecular chaperone. Has ATPase activity K04079 - - 3.554e-280 874.0
CMS1_k127_6074356_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 4.015e-206 649.0
CMS1_k127_6074356_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000003099 193.0
CMS1_k127_6074356_11 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000009191 187.0
CMS1_k127_6074356_12 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000001826 186.0
CMS1_k127_6074356_13 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.000000000000000000000000000000000000008112 152.0
CMS1_k127_6074356_14 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000003267 124.0
CMS1_k127_6074356_15 Planctomycete cytochrome C - - - 0.0000000000000000000000000000006905 127.0
CMS1_k127_6074356_16 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000003561 93.0
CMS1_k127_6074356_17 - - - - 0.0000000000002784 78.0
CMS1_k127_6074356_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.452e-198 627.0
CMS1_k127_6074356_3 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 503.0
CMS1_k127_6074356_4 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 501.0
CMS1_k127_6074356_5 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 501.0
CMS1_k127_6074356_6 Capsule synthesis protein K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 441.0
CMS1_k127_6074356_7 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 330.0
CMS1_k127_6074356_8 transport system, permease component - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003376 280.0
CMS1_k127_6074356_9 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002272 258.0
CMS1_k127_611757_0 Alpha amylase catalytic K00690 - 2.4.1.7 1.082e-245 774.0
CMS1_k127_611757_1 Poly-beta-hydroxybutyrate polymerase N terminal K03821 - - 3.29e-243 767.0
CMS1_k127_611757_10 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 326.0
CMS1_k127_611757_11 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001139 277.0
CMS1_k127_611757_12 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
CMS1_k127_611757_13 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001218 263.0
CMS1_k127_611757_14 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000003837 228.0
CMS1_k127_611757_15 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000003003 146.0
CMS1_k127_611757_16 - - - - 0.0000000000000000002804 93.0
CMS1_k127_611757_17 - - - - 0.00000000000000008766 85.0
CMS1_k127_611757_18 Putative metal-binding motif - - - 0.00000000009544 70.0
CMS1_k127_611757_19 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.00001512 48.0
CMS1_k127_611757_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
CMS1_k127_611757_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 518.0
CMS1_k127_611757_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 499.0
CMS1_k127_611757_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009064,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 481.0
CMS1_k127_611757_6 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 419.0
CMS1_k127_611757_7 nitric oxide reductase activity K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 406.0
CMS1_k127_611757_8 HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 363.0
CMS1_k127_611757_9 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 359.0
CMS1_k127_6160656_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1258.0
CMS1_k127_6160656_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.703e-208 654.0
CMS1_k127_6160656_10 - - - - 0.0000000000004626 80.0
CMS1_k127_6160656_11 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000009344 54.0
CMS1_k127_6160656_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 577.0
CMS1_k127_6160656_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 487.0
CMS1_k127_6160656_4 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 346.0
CMS1_k127_6160656_5 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000005195 185.0
CMS1_k127_6160656_6 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000001031 159.0
CMS1_k127_6160656_7 Modulates RecA activity K03565 - - 0.000000000000000000000000000000002376 134.0
CMS1_k127_6160656_8 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005979,GO:0006109,GO:0006139,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010675,GO:0010677,GO:0010906,GO:0010962,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032881,GO:0032885,GO:0034248,GO:0034249,GO:0034641,GO:0043170,GO:0043255,GO:0043467,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045719,GO:0045912,GO:0045947,GO:0046483,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0065007,GO:0070873,GO:0070874,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.00000000000000000000001008 102.0
CMS1_k127_6160656_9 Peptidase propeptide and YPEB domain - - - 0.00000000000000000001041 95.0
CMS1_k127_6162132_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 491.0
CMS1_k127_6162132_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 481.0
CMS1_k127_6162132_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
CMS1_k127_6162132_3 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000007131 243.0
CMS1_k127_6162132_4 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000006913 231.0
CMS1_k127_6162132_5 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 GO:0003674,GO:0003824,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016787,GO:0016788,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:0072330,GO:0090499,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000001875 231.0
CMS1_k127_6162132_6 Integral membrane protein (DUF2244) - - - 0.0000000000000000000000000000001647 130.0
CMS1_k127_6207359_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.092e-196 621.0
CMS1_k127_6207359_1 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 512.0
CMS1_k127_6207359_10 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001449 250.0
CMS1_k127_6207359_11 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006388 254.0
CMS1_k127_6207359_12 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon - GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000664 240.0
CMS1_k127_6207359_13 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000005275 220.0
CMS1_k127_6207359_14 2OG-Fe(II) oxygenase K07394 - - 0.00000000000000000000000000000000000000000000000000000000001199 215.0
CMS1_k127_6207359_15 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000002948 209.0
CMS1_k127_6207359_16 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000005038 205.0
CMS1_k127_6207359_17 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000001483 203.0
CMS1_k127_6207359_18 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000004162 183.0
CMS1_k127_6207359_19 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000002035 171.0
CMS1_k127_6207359_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 500.0
CMS1_k127_6207359_20 - - - - 0.00000000000000000000000000000000000000000007067 163.0
CMS1_k127_6207359_21 transglycosylase - - - 0.000000000000000000000000000000000000004545 166.0
CMS1_k127_6207359_22 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000005027 147.0
CMS1_k127_6207359_23 COG0666 FOG Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000009776 160.0
CMS1_k127_6207359_24 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000004486 142.0
CMS1_k127_6207359_25 Protein of unknown function (DUF2799) - - - 0.00000000000000000000000000000005476 136.0
CMS1_k127_6207359_26 Thioredoxin - - - 0.000000000000000000000144 110.0
CMS1_k127_6207359_27 - - - - 0.0000000000000000004135 93.0
CMS1_k127_6207359_28 PFAM lipolytic protein G-D-S-L family - - - 0.00000000000000007723 85.0
CMS1_k127_6207359_29 PFAM lipolytic protein G-D-S-L family - - - 0.000000000001142 75.0
CMS1_k127_6207359_3 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 464.0
CMS1_k127_6207359_30 - - - - 0.00000000001699 73.0
CMS1_k127_6207359_4 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 394.0
CMS1_k127_6207359_5 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 364.0
CMS1_k127_6207359_6 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 336.0
CMS1_k127_6207359_7 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 323.0
CMS1_k127_6207359_8 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 302.0
CMS1_k127_6207359_9 Flavoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 297.0
CMS1_k127_634261_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 6.642e-197 632.0
CMS1_k127_634261_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 402.0
CMS1_k127_634261_2 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 387.0
CMS1_k127_634261_3 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 326.0
CMS1_k127_666032_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 5.665e-250 778.0
CMS1_k127_666032_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 5.554e-206 651.0
CMS1_k127_666032_2 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 478.0
CMS1_k127_666032_3 Uncharacterised signal transduction histidine kinase domain (DUF2222) K07678 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009185 430.0
CMS1_k127_666032_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000008114 234.0
CMS1_k127_666032_5 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000005121 212.0
CMS1_k127_666032_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000007477 147.0
CMS1_k127_666032_7 transport system, periplasmic component - - - 0.00000000000000000000000000000000001766 149.0
CMS1_k127_67688_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1103.0
CMS1_k127_67688_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 0.0 1031.0
CMS1_k127_67688_10 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 445.0
CMS1_k127_67688_11 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 435.0
CMS1_k127_67688_12 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 399.0
CMS1_k127_67688_13 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 376.0
CMS1_k127_67688_14 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 342.0
CMS1_k127_67688_15 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 311.0
CMS1_k127_67688_16 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000253 271.0
CMS1_k127_67688_17 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000428 276.0
CMS1_k127_67688_18 PFAM Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001687 260.0
CMS1_k127_67688_19 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009638 255.0
CMS1_k127_67688_2 ABC transporter - - - 1.375e-299 937.0
CMS1_k127_67688_20 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007272 245.0
CMS1_k127_67688_21 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000002487 229.0
CMS1_k127_67688_22 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000001431 224.0
CMS1_k127_67688_23 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000003444 216.0
CMS1_k127_67688_24 Mota tolq exbb proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000002843 214.0
CMS1_k127_67688_25 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000001708 173.0
CMS1_k127_67688_26 Aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000006277 168.0
CMS1_k127_67688_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000001641 157.0
CMS1_k127_67688_28 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000007886 122.0
CMS1_k127_67688_29 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000003154 126.0
CMS1_k127_67688_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.686e-217 681.0
CMS1_k127_67688_30 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000001405 126.0
CMS1_k127_67688_31 - - - - 0.00000000000000000000000003777 115.0
CMS1_k127_67688_32 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000001133 110.0
CMS1_k127_67688_33 CNP1-like family - - - 0.000000000000000006466 91.0
CMS1_k127_67688_34 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.00000000000000005698 85.0
CMS1_k127_67688_37 PFAM Sporulation - - - 0.000003916 59.0
CMS1_k127_67688_4 Cysteine-rich domain - - - 2.142e-214 673.0
CMS1_k127_67688_5 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 3.169e-197 625.0
CMS1_k127_67688_6 Lipase maturation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 516.0
CMS1_k127_67688_7 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 496.0
CMS1_k127_67688_8 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 479.0
CMS1_k127_67688_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 455.0
CMS1_k127_710456_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 1.646e-308 951.0
CMS1_k127_710456_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.416e-306 947.0
CMS1_k127_710456_10 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 486.0
CMS1_k127_710456_11 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 467.0
CMS1_k127_710456_12 AIR synthase related protein, C-terminal K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 458.0
CMS1_k127_710456_13 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 426.0
CMS1_k127_710456_14 3'-5' exonuclease K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 380.0
CMS1_k127_710456_15 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 370.0
CMS1_k127_710456_16 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 338.0
CMS1_k127_710456_17 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 329.0
CMS1_k127_710456_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 324.0
CMS1_k127_710456_19 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 303.0
CMS1_k127_710456_2 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.069e-275 853.0
CMS1_k127_710456_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001591 280.0
CMS1_k127_710456_21 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000308 278.0
CMS1_k127_710456_22 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000001436 261.0
CMS1_k127_710456_23 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000002517 255.0
CMS1_k127_710456_24 Belongs to the DnaA family K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000000000000000007367 232.0
CMS1_k127_710456_25 MucB/RseB C-terminal domain K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.0000000000000000000000000000000000000000000000000000000000000000112 236.0
CMS1_k127_710456_26 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000002543 228.0
CMS1_k127_710456_27 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000000000000000000000000000000006577 211.0
CMS1_k127_710456_28 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000000000000000000000000000000000000000000056 214.0
CMS1_k127_710456_29 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000000000579 208.0
CMS1_k127_710456_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.727e-262 819.0
CMS1_k127_710456_30 Belongs to the UPF0260 family K09160 - - 0.00000000000000000000000000000000000000000000000000000001055 201.0
CMS1_k127_710456_31 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000008655 197.0
CMS1_k127_710456_32 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000001075 208.0
CMS1_k127_710456_33 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000005999 188.0
CMS1_k127_710456_34 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000007075 156.0
CMS1_k127_710456_35 COG1393 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.00000000000000000000000000000000000002225 162.0
CMS1_k127_710456_36 Macrophage migration inhibitory factor (MIF) - - - 0.0000000000000000000000000000000000001295 145.0
CMS1_k127_710456_37 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000001043 143.0
CMS1_k127_710456_38 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000000000000000000000008178 119.0
CMS1_k127_710456_39 - - - - 0.0000000000000000000000000104 122.0
CMS1_k127_710456_4 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.279e-250 781.0
CMS1_k127_710456_40 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000001992 109.0
CMS1_k127_710456_41 acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000004229 109.0
CMS1_k127_710456_42 cell adhesion - - - 0.00000000000000000002516 94.0
CMS1_k127_710456_43 cell redox homeostasis K00384 - 1.8.1.9 0.0000000000000000168 86.0
CMS1_k127_710456_44 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E K03597 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.0000000000001022 78.0
CMS1_k127_710456_45 Domain of unknown function (DUF4124) - - - 0.00000002577 61.0
CMS1_k127_710456_46 COG0642 Signal transduction histidine kinase K07678 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.00005475 52.0
CMS1_k127_710456_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 5.037e-235 738.0
CMS1_k127_710456_6 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.379e-208 653.0
CMS1_k127_710456_7 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 560.0
CMS1_k127_710456_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 531.0
CMS1_k127_710456_9 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 514.0
CMS1_k127_858622_0 peptidyl-tyrosine sulfation - - - 2.531e-241 764.0
CMS1_k127_858622_1 peptidyl-tyrosine sulfation - - - 0.00000000003234 73.0
CMS1_k127_917032_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.437e-300 940.0
CMS1_k127_917032_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 8.077e-255 798.0
CMS1_k127_917032_10 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 302.0
CMS1_k127_917032_11 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 288.0
CMS1_k127_917032_12 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000009736 265.0
CMS1_k127_917032_13 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000009232 201.0
CMS1_k127_917032_14 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000347 179.0
CMS1_k127_917032_15 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000001139 169.0
CMS1_k127_917032_16 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000037 139.0
CMS1_k127_917032_17 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003522 134.0
CMS1_k127_917032_18 membrane - - - 0.000000000000000000000000000002485 135.0
CMS1_k127_917032_19 nuclear chromosome segregation - - - 0.0000000000000002797 79.0
CMS1_k127_917032_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 3.06e-233 726.0
CMS1_k127_917032_20 protein conserved in bacteria K09937 - - 0.000000000000005082 76.0
CMS1_k127_917032_21 - - - - 0.000000000101 65.0
CMS1_k127_917032_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 6.193e-213 669.0
CMS1_k127_917032_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 519.0
CMS1_k127_917032_5 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 464.0
CMS1_k127_917032_6 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 455.0
CMS1_k127_917032_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 379.0
CMS1_k127_917032_8 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 362.0
CMS1_k127_917032_9 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 351.0
CMS1_k127_942536_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1672.0
CMS1_k127_942536_1 Heat shock 70 kDa protein K04043 - - 0.0 1047.0
CMS1_k127_942536_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 527.0
CMS1_k127_942536_11 synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 500.0
CMS1_k127_942536_12 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 433.0
CMS1_k127_942536_13 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 422.0
CMS1_k127_942536_14 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 390.0
CMS1_k127_942536_15 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 412.0
CMS1_k127_942536_16 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 409.0
CMS1_k127_942536_17 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 365.0
CMS1_k127_942536_18 YHS domain K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 321.0
CMS1_k127_942536_19 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 289.0
CMS1_k127_942536_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.712e-318 985.0
CMS1_k127_942536_20 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008154 270.0
CMS1_k127_942536_21 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006298 276.0
CMS1_k127_942536_22 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000007087 237.0
CMS1_k127_942536_23 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000002065 234.0
CMS1_k127_942536_24 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000007093 210.0
CMS1_k127_942536_25 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000000000008894 214.0
CMS1_k127_942536_26 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030554,GO:0032991,GO:0036094,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000008133 195.0
CMS1_k127_942536_28 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000006476 179.0
CMS1_k127_942536_29 Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000001669 168.0
CMS1_k127_942536_3 FecR protein - - - 2.446e-246 798.0
CMS1_k127_942536_30 monooxygenase activity - - - 0.00000000000000000000000000000000000001247 149.0
CMS1_k127_942536_31 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000001087 143.0
CMS1_k127_942536_32 PFAM toluene tolerance K07323 - - 0.0000000000000000000000000000000005331 140.0
CMS1_k127_942536_33 - - - - 0.00000000000000000000000000000114 126.0
CMS1_k127_942536_34 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000005506 123.0
CMS1_k127_942536_35 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000006835 122.0
CMS1_k127_942536_36 - - - - 0.00000000000000000000000001984 111.0
CMS1_k127_942536_37 CRS1_YhbY K07574 - - 0.00000000000000000000007858 103.0
CMS1_k127_942536_38 Domain of unknown function (DUF4149) - - - 0.000000000000000000000105 104.0
CMS1_k127_942536_39 efflux transmembrane transporter activity K02004 - - 0.000000000000000002326 92.0
CMS1_k127_942536_4 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 3.841e-195 621.0
CMS1_k127_942536_40 - - - - 0.000000000000000337 83.0
CMS1_k127_942536_42 Hydrogenase maturation protease K03605 - - 0.000002892 55.0
CMS1_k127_942536_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 608.0
CMS1_k127_942536_6 Carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 595.0
CMS1_k127_942536_7 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 555.0
CMS1_k127_942536_8 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 537.0
CMS1_k127_942536_9 Sterol-sensing domain of SREBP cleavage-activation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 535.0
CMS1_k127_95078_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1406.0
CMS1_k127_95078_1 branched-chain amino acid K11959 - - 1.531e-240 749.0
CMS1_k127_95078_10 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000002146 222.0
CMS1_k127_95078_11 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000009117 209.0
CMS1_k127_95078_12 ferredoxin-type protein napF K02572 - - 0.0000000000000000000000000000000000000000000001644 174.0
CMS1_k127_95078_13 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000002361 169.0
CMS1_k127_95078_14 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000001496 78.0
CMS1_k127_95078_15 Pfam Hemerythrin HHE - - - 0.000000000000006053 81.0
CMS1_k127_95078_16 NapD protein K02570 - - 0.00000000000001206 83.0
CMS1_k127_95078_2 short chain amide porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 532.0
CMS1_k127_95078_3 TIGRFAM ferredoxin-type protein, NapH MauN family K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 432.0
CMS1_k127_95078_4 4Fe-4S binding domain K02573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 417.0
CMS1_k127_95078_5 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 305.0
CMS1_k127_95078_6 Cytochrome c-type protein K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 300.0
CMS1_k127_95078_7 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 290.0
CMS1_k127_95078_8 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006 295.0
CMS1_k127_95078_9 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000696 273.0
CMS1_k127_953157_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 1.181e-247 778.0
CMS1_k127_953157_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 4.948e-197 619.0
CMS1_k127_953157_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009554 316.0
CMS1_k127_953157_11 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 314.0
CMS1_k127_953157_12 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003573 254.0
CMS1_k127_953157_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000003146 233.0
CMS1_k127_953157_14 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000001218 158.0
CMS1_k127_953157_15 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000009318 145.0
CMS1_k127_953157_16 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000006086 132.0
CMS1_k127_953157_17 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000001244 111.0
CMS1_k127_953157_18 - - - - 0.00000000000001113 78.0
CMS1_k127_953157_19 Pentapeptide repeats (8 copies) - - - 0.00000000000001291 80.0
CMS1_k127_953157_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 564.0
CMS1_k127_953157_20 Protein of unknown function (DUF3106) - - - 0.000007556 53.0
CMS1_k127_953157_22 - - - - 0.0005947 49.0
CMS1_k127_953157_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 485.0
CMS1_k127_953157_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 440.0
CMS1_k127_953157_5 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 438.0
CMS1_k127_953157_6 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 390.0
CMS1_k127_953157_7 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 381.0
CMS1_k127_953157_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 363.0
CMS1_k127_953157_9 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008565 363.0