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Overview

ID MAG00368
Name CMS1_bin.54
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobulbia
Order Desulfobulbales
Family Desulfocapsaceae
Genus Desulforhopalus
Species
Assembly information
Completeness (%) 86.8
Contamination (%) 4.52
GC content (%) 51.0
N50 (bp) 10,771
Genome size (bp) 3,446,647

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3133

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1036721_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 0.0 1019.0
CMS1_k127_1036721_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 321.0
CMS1_k127_1036721_2 TIGRFAM Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 303.0
CMS1_k127_1047329_0 amino acid transport K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 579.0
CMS1_k127_1047329_1 Binding-protein-dependent transport system inner membrane component K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 530.0
CMS1_k127_1047329_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 521.0
CMS1_k127_1047329_3 ATPases associated with a variety of cellular activities K02028,K09972 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 435.0
CMS1_k127_1050668_0 GGGtGRT protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 572.0
CMS1_k127_1050668_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 472.0
CMS1_k127_1050668_10 - - - - 0.00000000000000162 82.0
CMS1_k127_1050668_2 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009585 457.0
CMS1_k127_1050668_3 COG0822 NifU homolog involved in Fe-S cluster formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 399.0
CMS1_k127_1050668_4 Mo-molybdopterin cofactor biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 339.0
CMS1_k127_1050668_5 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 302.0
CMS1_k127_1050668_6 ABC-2 type transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000003606 246.0
CMS1_k127_1050668_7 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 240.0
CMS1_k127_1050668_8 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000002701 202.0
CMS1_k127_1050668_9 - - - - 0.00000000000000000001592 96.0
CMS1_k127_1057857_0 HlyD family secretion protein K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538 509.0
CMS1_k127_1057857_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000002327 214.0
CMS1_k127_1057857_2 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000000000000000000000000005991 186.0
CMS1_k127_1057857_3 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000006426 97.0
CMS1_k127_1069276_0 Conserved region in glutamate synthase - - - 5.183e-209 653.0
CMS1_k127_1069276_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 390.0
CMS1_k127_1069276_2 ANTAR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 314.0
CMS1_k127_1069276_3 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003888 284.0
CMS1_k127_1069276_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 261.0
CMS1_k127_1069276_5 Predicted membrane protein (DUF2318) - - - 0.0000000000000000000000000000000000000000003727 164.0
CMS1_k127_1092292_0 belongs to the CobB CobQ family K00625,K13788 - 2.3.1.8 3.728e-208 662.0
CMS1_k127_1092292_1 Sigma-54 interaction domain K03974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 405.0
CMS1_k127_1092292_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 373.0
CMS1_k127_1092292_3 Peptidase dimerisation domain K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 347.0
CMS1_k127_1092292_4 Cytochrome bd terminal oxidase subunit I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 339.0
CMS1_k127_1092292_5 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001797 250.0
CMS1_k127_1092292_6 iron-sulfur transferase activity K04488,K15790 - - 0.000000000000000000000000000000000000001497 151.0
CMS1_k127_1092292_7 PspC domain K03973 - - 0.000000000000000000000000000000000003058 142.0
CMS1_k127_1092292_8 - - - - 0.00000002687 58.0
CMS1_k127_1143562_0 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 1.421e-320 983.0
CMS1_k127_1143562_1 TIGRFAM Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 503.0
CMS1_k127_1143562_2 glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002684 252.0
CMS1_k127_1143562_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000000000001653 124.0
CMS1_k127_1143562_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000007383 90.0
CMS1_k127_1193544_0 Cache 3/Cache 2 fusion domain K03406 - - 2.556e-228 737.0
CMS1_k127_1193544_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 433.0
CMS1_k127_1193544_2 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 413.0
CMS1_k127_1193544_3 transport system periplasmic component K02055,K05777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009811 393.0
CMS1_k127_1193544_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002317 280.0
CMS1_k127_1193544_5 Glycosyl transferase family 2 K09931 - - 0.00000000000000000000000000000000000000000000000000000000000000000001472 241.0
CMS1_k127_1193544_6 binding-protein-dependent transport systems inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000009085 223.0
CMS1_k127_1193544_7 HI0933-like protein K00322 - 1.6.1.1 0.0000000000000000000000000000000000000000000000000000000005583 211.0
CMS1_k127_1193544_8 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000001232 194.0
CMS1_k127_1193544_9 Alternative locus ID - - - 0.0000000000000000000000000000000000000000000000002286 183.0
CMS1_k127_1199916_0 Branched-chain amino acid transport system / permease component K01989,K05832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 440.0
CMS1_k127_1199916_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 434.0
CMS1_k127_1199916_2 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 419.0
CMS1_k127_1199916_3 ABC transporter K05833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 382.0
CMS1_k127_1199916_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 374.0
CMS1_k127_1199916_5 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 322.0
CMS1_k127_1199916_6 - K07020,K18614 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0034641,GO:0042365,GO:0042737,GO:0042802,GO:0042803,GO:0042816,GO:0042820,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046983,GO:0047411,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.29 0.0000000000000000000000000000000000000000000000001074 181.0
CMS1_k127_1199916_7 PFAM UspA - - - 0.00000000000000000000000000000000000000000001021 175.0
CMS1_k127_1199916_8 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 GO:0003674,GO:0003824,GO:0004416,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 3.1.2.6 0.0000000008232 61.0
CMS1_k127_120643_0 FtsX-like permease family K02004 - - 5.713e-246 784.0
CMS1_k127_120643_1 Bacterial regulatory protein, Fis family - - - 4.783e-199 630.0
CMS1_k127_120643_10 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000007301 164.0
CMS1_k127_120643_11 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.00000000000000000000000000000000000463 139.0
CMS1_k127_120643_12 Belongs to the histone-like protein H-NS family K03746,K11685 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0043900,GO:0043901,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1900190,GO:1900191,GO:1900231,GO:1900232,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000005969 114.0
CMS1_k127_120643_13 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000001481 108.0
CMS1_k127_120643_14 phosphorelay signal transduction system - - - 0.0000000000000000002817 92.0
CMS1_k127_120643_15 Family of unknown function (DUF5320) - - - 0.000000006054 61.0
CMS1_k127_120643_2 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 459.0
CMS1_k127_120643_3 CobQ CobB MinD ParA nucleotide binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 429.0
CMS1_k127_120643_4 CobQ CobB MinD ParA nucleotide binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 396.0
CMS1_k127_120643_5 ABC transporter K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 295.0
CMS1_k127_120643_6 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000002133 250.0
CMS1_k127_120643_7 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000002062 226.0
CMS1_k127_120643_8 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000000000005255 209.0
CMS1_k127_120643_9 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000000003401 180.0
CMS1_k127_1230260_0 Amino acid kinase family K00928 - 2.7.2.4 2.474e-229 717.0
CMS1_k127_1230260_1 aminotransferase K00813,K00832 GO:0003674,GO:0003824,GO:0004069,GO:0004838,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0033585,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0070279,GO:0070547,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.6.1.1,2.6.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 579.0
CMS1_k127_1230260_2 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 453.0
CMS1_k127_1230260_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000004265 231.0
CMS1_k127_1230260_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000001934 207.0
CMS1_k127_1230260_5 - - - - 0.000000000000000000000000000000000000000000000000006298 184.0
CMS1_k127_1230260_6 - - - - 0.0000000000000000000000000000000000000000002788 164.0
CMS1_k127_1230260_7 Acetyltransferase (GNAT) domain K02348 - - 0.0000000000000000000000000000000000000001413 154.0
CMS1_k127_1230260_8 ACT domain - - - 0.00000000000000000000000000000000000449 143.0
CMS1_k127_1241980_0 PFAM HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004897 279.0
CMS1_k127_1241980_1 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000001209 222.0
CMS1_k127_1241980_2 - - - - 0.0000000000000000000000000000000000000000000009989 167.0
CMS1_k127_1241980_4 PFAM Transglycosylase-associated protein - - - 0.00000000000000000001675 94.0
CMS1_k127_1241980_5 - - - - 0.000000000000002616 78.0
CMS1_k127_1241980_6 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000133 54.0
CMS1_k127_1267669_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004871 276.0
CMS1_k127_1267669_1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01802,K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000002981 235.0
CMS1_k127_1267669_2 - - - - 0.00000000000000000000000000000000000000007899 157.0
CMS1_k127_1298324_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006512 407.0
CMS1_k127_1298324_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 294.0
CMS1_k127_1298324_2 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000009481 187.0
CMS1_k127_1298324_3 - - - - 0.0000000000000000000000000000000006199 135.0
CMS1_k127_130455_0 SelR domain K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
CMS1_k127_130455_1 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000001136 149.0
CMS1_k127_130455_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000014 155.0
CMS1_k127_131792_0 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 428.0
CMS1_k127_131792_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 385.0
CMS1_k127_131792_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002481 277.0
CMS1_k127_131792_3 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000003954 245.0
CMS1_k127_131792_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K16950 - - 0.00000000000000000000000000000000000000000000000000000000000002372 228.0
CMS1_k127_131792_5 TIGRFAM thiazole biosynthesis protein ThiH K03150 - 4.1.99.19 0.0000000000000000000000001509 108.0
CMS1_k127_131792_6 ThiS family K03154 - - 0.0000000000009285 72.0
CMS1_k127_131792_7 Lysin motif - - - 0.000000001935 67.0
CMS1_k127_131792_8 Rubrerythrin - - - 0.00000002596 62.0
CMS1_k127_1318192_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 7.054e-197 621.0
CMS1_k127_1318192_1 membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 359.0
CMS1_k127_1318192_10 regulation of single-species biofilm formation K13572 - - 0.0000001767 58.0
CMS1_k127_1318192_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 288.0
CMS1_k127_1318192_3 Virulence protein RhuM family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006614 271.0
CMS1_k127_1318192_4 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003081 245.0
CMS1_k127_1318192_5 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.00000000000000000000000000000000000000000000000000000000003008 209.0
CMS1_k127_1318192_6 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000003848 183.0
CMS1_k127_1318192_7 regulation of single-species biofilm formation - - - 0.0000000000000000000000000000000000000003183 158.0
CMS1_k127_1318192_8 - - - - 0.000000000000000000000000000006951 124.0
CMS1_k127_1318192_9 Virulence protein RhuM family - - - 0.000000000000000000000000000393 115.0
CMS1_k127_1333075_0 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 434.0
CMS1_k127_1333075_1 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 366.0
CMS1_k127_1333075_2 membrane K09807 - - 0.000000000000000000000000000000000000000000000000000000171 202.0
CMS1_k127_1333075_3 Diguanylate cyclase - - - 0.000000000000000000705 95.0
CMS1_k127_1342859_0 PFAM sigma-54 factor interaction domain-containing protein K03721 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 412.0
CMS1_k127_1342859_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009134 284.0
CMS1_k127_134640_0 Glycosyl transferase family 21 - - - 0.0 1134.0
CMS1_k127_134640_1 - - - - 0.0000000000000000000000000000000000000000000000000000001618 199.0
CMS1_k127_134640_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000003485 177.0
CMS1_k127_134640_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000002201 103.0
CMS1_k127_134640_4 small membrane protein - - - 0.00000000003171 72.0
CMS1_k127_1348809_0 Bacterial type II and III secretion system protein K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 539.0
CMS1_k127_1348809_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 381.0
CMS1_k127_1348809_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003941 283.0
CMS1_k127_1348809_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000007944 223.0
CMS1_k127_1351288_0 MMPL family K07003 - - 0.0 1155.0
CMS1_k127_1351288_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 284.0
CMS1_k127_1351288_2 Thioesterase K07107 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006943 278.0
CMS1_k127_1351288_3 polysaccharide deacetylase K01452,K22278 - 3.5.1.104,3.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002584 277.0
CMS1_k127_1351288_4 glycosyltransferase involved in LPS biosynthesis K07270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 261.0
CMS1_k127_1351288_5 Polyketide synthase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009121 240.0
CMS1_k127_1351288_6 - - - - 0.00000000000000000000000000000000000000000008851 162.0
CMS1_k127_1351288_7 PFAM EAL domain - - - 0.000000000005866 69.0
CMS1_k127_1361479_0 Belongs to the aconitase IPM isomerase family K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:0097159,GO:1901363,GO:1901575 4.2.1.3,4.2.1.99 3.141e-286 901.0
CMS1_k127_1361479_1 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 1.245e-228 713.0
CMS1_k127_1361479_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 391.0
CMS1_k127_1361479_3 Ammonia monooxygenase K07120 - - 0.00000000000000000000000000000000000000000000000000000000000000004103 233.0
CMS1_k127_1361479_4 Protein conserved in bacteria - - - 0.000006607 51.0
CMS1_k127_136159_0 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 456.0
CMS1_k127_136159_1 Mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 375.0
CMS1_k127_136159_2 - - - - 0.00000000000000000000000000000000008208 137.0
CMS1_k127_1372562_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.986e-220 689.0
CMS1_k127_1372562_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 546.0
CMS1_k127_1372562_10 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 325.0
CMS1_k127_1372562_11 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002035 260.0
CMS1_k127_1372562_12 Thioredoxin - - - 0.000000000000000000000000000000000000000000001221 168.0
CMS1_k127_1372562_13 Thioredoxin - - - 0.00000000000000000000000000000000000434 143.0
CMS1_k127_1372562_14 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000389 57.0
CMS1_k127_1372562_16 - - - - 0.00004901 49.0
CMS1_k127_1372562_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 511.0
CMS1_k127_1372562_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01751,K01754 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008838,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575 4.3.1.15,4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 475.0
CMS1_k127_1372562_4 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 465.0
CMS1_k127_1372562_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 379.0
CMS1_k127_1372562_6 Pfam MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 355.0
CMS1_k127_1372562_7 Secreted protein, containing von Willebrand factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 348.0
CMS1_k127_1372562_8 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008504 346.0
CMS1_k127_1372562_9 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 329.0
CMS1_k127_1373756_0 Bacterial periplasmic substrate-binding proteins - - - 1.657e-219 693.0
CMS1_k127_1373756_1 histidine kinase A domain protein - - - 1.571e-200 647.0
CMS1_k127_1373756_2 histidine kinase A domain protein - - - 5.291e-194 631.0
CMS1_k127_1373756_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 539.0
CMS1_k127_1373756_4 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 467.0
CMS1_k127_1373756_5 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000493 259.0
CMS1_k127_1373756_6 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000000000000000000000000000000001419 190.0
CMS1_k127_1373756_7 Uncharacterized conserved protein (DUF2293) - - - 0.00000000000000000000000000000000000000000000106 169.0
CMS1_k127_137663_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 368.0
CMS1_k127_137663_1 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 340.0
CMS1_k127_137663_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000005092 184.0
CMS1_k127_14138_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 602.0
CMS1_k127_14138_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 517.0
CMS1_k127_14138_2 Major facilitator superfamily K05939,K18214 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 389.0
CMS1_k127_14138_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 351.0
CMS1_k127_14138_4 PFAM Cysteine-rich domain K11473 - - 0.000000000000000000000000000000000000000000001189 171.0
CMS1_k127_1431008_0 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 2.361e-258 801.0
CMS1_k127_1431008_1 TIGRFAM Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 490.0
CMS1_k127_1431008_10 - - - - 0.00000004563 59.0
CMS1_k127_1431008_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 423.0
CMS1_k127_1431008_3 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis K02585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 338.0
CMS1_k127_1431008_4 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000773 196.0
CMS1_k127_1431008_5 ATP synthase gamma subunit K02115 - - 0.00000000000000000000000000000000000000000000001856 182.0
CMS1_k127_1431008_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000002786 160.0
CMS1_k127_1431008_7 - - - - 0.000000000000000000000000000000000000003235 150.0
CMS1_k127_1431008_8 - - - - 0.0000000000000000000000000000001653 124.0
CMS1_k127_1431008_9 - - - - 0.0000000000000000000000003371 108.0
CMS1_k127_1439970_0 LUD domain - - - 1.522e-292 914.0
CMS1_k127_1439970_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.187e-213 668.0
CMS1_k127_1439970_10 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 351.0
CMS1_k127_1439970_11 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 349.0
CMS1_k127_1439970_12 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 316.0
CMS1_k127_1439970_13 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001711 231.0
CMS1_k127_1439970_14 FCD K05799,K07746 - - 0.00000000000000000000000000000000000000000000000000000000000001445 223.0
CMS1_k127_1439970_15 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000002137 206.0
CMS1_k127_1439970_16 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000007104 185.0
CMS1_k127_1439970_17 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000001896 175.0
CMS1_k127_1439970_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000002391 164.0
CMS1_k127_1439970_19 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.0000000000000000000000000000000000000000006158 160.0
CMS1_k127_1439970_2 two component, sigma54 specific, transcriptional regulator K02481 - - 4.456e-202 642.0
CMS1_k127_1439970_21 LUD domain K00782 - - 0.000000000000000000000000000000000000001814 158.0
CMS1_k127_1439970_22 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000004396 155.0
CMS1_k127_1439970_23 peptidase - - - 0.0000000000000000000000000000000006728 143.0
CMS1_k127_1439970_24 hemerythrin-like metal-binding K07216 - - 0.00000000000000000000000000000009084 132.0
CMS1_k127_1439970_25 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0004888 47.0
CMS1_k127_1439970_3 Domain of unknown function (DUF3390) K18929 - - 7.98e-202 638.0
CMS1_k127_1439970_4 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 552.0
CMS1_k127_1439970_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 498.0
CMS1_k127_1439970_6 FMN-dependent dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 490.0
CMS1_k127_1439970_7 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 408.0
CMS1_k127_1439970_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 399.0
CMS1_k127_1439970_9 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 369.0
CMS1_k127_147174_0 PFAM Polysulphide reductase, NrfD K00185 - - 8.05e-201 630.0
CMS1_k127_147174_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 3.218e-195 618.0
CMS1_k127_147174_10 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000001281 69.0
CMS1_k127_147174_2 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 456.0
CMS1_k127_147174_3 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 400.0
CMS1_k127_147174_4 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 376.0
CMS1_k127_147174_5 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 374.0
CMS1_k127_147174_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 363.0
CMS1_k127_147174_7 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
CMS1_k127_147174_8 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000002349 222.0
CMS1_k127_147174_9 NAD(P)H dehydrogenase (quinone) activity - - - 0.000000000000000000000000000000000000000000000000000000000001098 216.0
CMS1_k127_1485445_0 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001511 279.0
CMS1_k127_1485445_1 pfam nlp p60 K13695 - - 0.00000000000000000000000000000000000000000000005285 174.0
CMS1_k127_1485445_3 Uncharacterised protein family (UPF0270) K09898 - - 0.0000000000000000000000001235 108.0
CMS1_k127_1485445_4 Virulence protein RhuM family - - - 0.000009705 49.0
CMS1_k127_1485445_5 - - - - 0.00007684 52.0
CMS1_k127_1485445_6 SH3 type 3 domain protein K01447 - 3.5.1.28 0.0002938 48.0
CMS1_k127_1515349_0 thiamine transport K02063 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006855,GO:0008150,GO:0015234,GO:0015238,GO:0015893,GO:0016020,GO:0022857,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0045117,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071934,GO:0071944,GO:0072348,GO:0072531,GO:0090482,GO:1901474,GO:1901682 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008766 521.0
CMS1_k127_1515349_1 Bacterial extracellular solute-binding protein K02064 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 429.0
CMS1_k127_1515349_2 ATPase activity K02010,K02052,K02062,K11072 - 3.6.3.30,3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 309.0
CMS1_k127_1515349_3 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002929 272.0
CMS1_k127_1515349_4 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.0000000000000000000000000000000000000685 150.0
CMS1_k127_1515349_5 - - - - 0.00000004199 57.0
CMS1_k127_1515349_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000008698 55.0
CMS1_k127_153893_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 530.0
CMS1_k127_153893_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008545 364.0
CMS1_k127_153893_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 347.0
CMS1_k127_153893_3 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 329.0
CMS1_k127_153893_4 Cache 3/Cache 2 fusion domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 290.0
CMS1_k127_153893_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000003343 240.0
CMS1_k127_153893_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000004195 234.0
CMS1_k127_153893_7 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000002935 189.0
CMS1_k127_153893_9 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0004425,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000261 53.0
CMS1_k127_154968_0 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 340.0
CMS1_k127_154968_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 312.0
CMS1_k127_154968_2 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001081 253.0
CMS1_k127_154968_3 Nitroreductase family - - - 0.00006179 45.0
CMS1_k127_154968_4 PAS fold - - - 0.000132 48.0
CMS1_k127_1555182_0 AcrB/AcrD/AcrF family - - - 0.0 1130.0
CMS1_k127_1555182_1 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 3.796e-194 613.0
CMS1_k127_1555182_2 SWIM zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 466.0
CMS1_k127_1555182_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 383.0
CMS1_k127_1555182_4 pfam nlp p60 K13695 - - 0.000000000000000000000000000000000002766 145.0
CMS1_k127_1570614_0 Glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 1.718e-196 620.0
CMS1_k127_1570614_1 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975,K20427 - 2.7.7.27,2.7.7.91 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 596.0
CMS1_k127_1570614_2 PFAM phosphoesterase RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 496.0
CMS1_k127_1570614_3 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 420.0
CMS1_k127_1570614_4 Recombinase - - - 0.0006972 44.0
CMS1_k127_1571973_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 2.831e-239 773.0
CMS1_k127_1571973_1 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 309.0
CMS1_k127_1571973_2 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000001944 199.0
CMS1_k127_1571973_3 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000002923 111.0
CMS1_k127_1571973_4 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000168 108.0
CMS1_k127_157959_0 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 4.092e-244 766.0
CMS1_k127_157959_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000818 515.0
CMS1_k127_157959_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 398.0
CMS1_k127_157959_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004835 278.0
CMS1_k127_157959_4 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005013 273.0
CMS1_k127_157959_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000004659 228.0
CMS1_k127_157959_6 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000002251 172.0
CMS1_k127_157959_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000609 171.0
CMS1_k127_157959_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000002998 121.0
CMS1_k127_1581393_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1297.0
CMS1_k127_1581393_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1129.0
CMS1_k127_1581393_10 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 485.0
CMS1_k127_1581393_11 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 477.0
CMS1_k127_1581393_12 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 429.0
CMS1_k127_1581393_13 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 411.0
CMS1_k127_1581393_14 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 311.0
CMS1_k127_1581393_15 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 307.0
CMS1_k127_1581393_16 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 302.0
CMS1_k127_1581393_17 reductase, beta subunit K00395 - 1.8.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 294.0
CMS1_k127_1581393_18 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000552 263.0
CMS1_k127_1581393_19 'Cold-shock' DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006041 247.0
CMS1_k127_1581393_2 Phosphoenolpyruvate carboxykinase N-terminal domain K01596 - 4.1.1.32 0.0 1045.0
CMS1_k127_1581393_20 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000001995 243.0
CMS1_k127_1581393_21 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000002701 191.0
CMS1_k127_1581393_23 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000001453 162.0
CMS1_k127_1581393_25 TIGRFAM PAS domain S-box - - - 0.0000000000000000001118 99.0
CMS1_k127_1581393_26 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.00000000000000006487 91.0
CMS1_k127_1581393_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 7.268e-281 874.0
CMS1_k127_1581393_4 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 7.427e-249 786.0
CMS1_k127_1581393_5 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.202e-224 701.0
CMS1_k127_1581393_6 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 6.381e-203 634.0
CMS1_k127_1581393_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.111e-202 635.0
CMS1_k127_1581393_8 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 541.0
CMS1_k127_1581393_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 536.0
CMS1_k127_161646_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 568.0
CMS1_k127_161646_1 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 453.0
CMS1_k127_161646_2 GPR1/FUN34/yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 308.0
CMS1_k127_161646_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000001 225.0
CMS1_k127_161646_4 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000008871 198.0
CMS1_k127_161646_5 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000008116 105.0
CMS1_k127_1654360_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 597.0
CMS1_k127_1654360_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 582.0
CMS1_k127_1654360_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 501.0
CMS1_k127_1654360_3 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 473.0
CMS1_k127_1654360_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 444.0
CMS1_k127_1654360_5 PFAM oxidoreductase domain protein K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 425.0
CMS1_k127_1654360_6 PFAM ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 392.0
CMS1_k127_1654360_7 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 287.0
CMS1_k127_1654360_8 branched-chain amino acid transmembrane transporter activity K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000253 236.0
CMS1_k127_1654360_9 Smr domain - - - 0.0000000000000000000000000005277 117.0
CMS1_k127_1699374_0 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 332.0
CMS1_k127_1699374_1 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001567 259.0
CMS1_k127_1699374_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000004079 200.0
CMS1_k127_1734395_0 ABC-type dipeptide transport system periplasmic component K12368 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0008150,GO:0009987,GO:0015833,GO:0020037,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042938,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 6.164e-282 872.0
CMS1_k127_1734395_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 2.626e-255 792.0
CMS1_k127_1734395_10 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 436.0
CMS1_k127_1734395_11 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 431.0
CMS1_k127_1734395_12 Belongs to the ABC transporter superfamily K12372 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0008144,GO:0008150,GO:0009314,GO:0009628,GO:0015232,GO:0015886,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0050896,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 423.0
CMS1_k127_1734395_13 Paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008613 413.0
CMS1_k127_1734395_14 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 344.0
CMS1_k127_1734395_15 reductase K00002,K17743 - 1.1.1.2,1.1.1.307 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 338.0
CMS1_k127_1734395_16 high-affinity sulfate:proton symporter activity K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 310.0
CMS1_k127_1734395_17 Methylates ribosomal protein L11 K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 291.0
CMS1_k127_1734395_18 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001278 241.0
CMS1_k127_1734395_19 CYTH - - - 0.0000000000000000000000000000000000000000000000000000000000006514 214.0
CMS1_k127_1734395_2 PFAM Mammalian cell entry related domain protein - - - 4.796e-254 812.0
CMS1_k127_1734395_20 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000002612 193.0
CMS1_k127_1734395_21 - - - - 0.0000000000000000000000000000000000000000000167 165.0
CMS1_k127_1734395_3 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 1.166e-245 763.0
CMS1_k127_1734395_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 601.0
CMS1_k127_1734395_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 536.0
CMS1_k127_1734395_6 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 522.0
CMS1_k127_1734395_7 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 524.0
CMS1_k127_1734395_8 Belongs to the ABC transporter superfamily K12371 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0015232,GO:0015886,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 481.0
CMS1_k127_1734395_9 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 438.0
CMS1_k127_176440_0 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 483.0
CMS1_k127_176440_1 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 400.0
CMS1_k127_176440_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 314.0
CMS1_k127_176440_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000006795 232.0
CMS1_k127_177012_0 NAD-specific glutamate dehydrogenase GdhA K15371 - 1.4.1.2 0.0 1467.0
CMS1_k127_177012_1 Glutathionylspermidine synthase K01460 - 3.5.1.78,6.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 614.0
CMS1_k127_1804532_0 PFAM sulfate transporter K03321 - - 0.0 1020.0
CMS1_k127_1804532_1 PFAM Radical SAM - - - 2.949e-243 765.0
CMS1_k127_1804532_2 Na H antiporter - - - 7.946e-234 731.0
CMS1_k127_1804532_3 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 286.0
CMS1_k127_180910_0 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 4.757e-260 822.0
CMS1_k127_180910_1 PFAM Methyl-accepting chemotaxis protein (MCP) K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 579.0
CMS1_k127_180910_10 protein-glutamate methylesterase activity K03412,K03413,K13924 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000004498 57.0
CMS1_k127_180910_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 362.0
CMS1_k127_180910_3 Outer membrane lipoprotein carrier protein LolA - - - 0.0000000000000000000000000000000000000000000000000000000001234 210.0
CMS1_k127_180910_4 dehydratase - - - 0.00000000000000000000000000000000000000000000008352 173.0
CMS1_k127_180910_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000005119 168.0
CMS1_k127_180910_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000005419 148.0
CMS1_k127_180910_7 - - - - 0.000000000000000000000000000000000006166 145.0
CMS1_k127_180910_8 acyl carrier protein K02078 - - 0.00000000000000000000000000000000009574 134.0
CMS1_k127_180910_9 transposase IS116 IS110 IS902 family protein - - - 0.0000000000000939 73.0
CMS1_k127_1812025_0 ABC-2 family transporter protein K01992 - - 0.0 1329.0
CMS1_k127_1812025_1 CheR methyltransferase, SAM binding domain K13924 - 2.1.1.80,3.1.1.61 0.0 1205.0
CMS1_k127_1812025_10 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 400.0
CMS1_k127_1812025_11 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 374.0
CMS1_k127_1812025_12 PFAM 4Fe-4S dicluster domain K04014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 355.0
CMS1_k127_1812025_13 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 289.0
CMS1_k127_1812025_14 SET domain K07117 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000219 260.0
CMS1_k127_1812025_15 PFAM extracellular solute-binding protein family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004609 250.0
CMS1_k127_1812025_16 Histidine kinase K13040 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000008831 248.0
CMS1_k127_1812025_17 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000000000000000000000000001656 175.0
CMS1_k127_1812025_18 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000000000000000000000000006914 177.0
CMS1_k127_1812025_19 PFAM Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000000000001902 158.0
CMS1_k127_1812025_2 ABC transporter transmembrane region - - - 1.58e-299 940.0
CMS1_k127_1812025_20 12 heme-binding sites - - - 0.000000000000000000000000000000000000003306 151.0
CMS1_k127_1812025_21 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000154 145.0
CMS1_k127_1812025_22 - - - - 0.0000000000000000000000000000000000001659 142.0
CMS1_k127_1812025_23 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000001832 123.0
CMS1_k127_1812025_24 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000003111 102.0
CMS1_k127_1812025_25 STAS domain K04749 - - 0.0000000000000000000003779 100.0
CMS1_k127_1812025_26 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000001069 92.0
CMS1_k127_1812025_3 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 596.0
CMS1_k127_1812025_4 TOBE domain K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 560.0
CMS1_k127_1812025_5 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 548.0
CMS1_k127_1812025_6 Binding-protein-dependent transport system inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 477.0
CMS1_k127_1812025_7 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 476.0
CMS1_k127_1812025_8 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 433.0
CMS1_k127_1812025_9 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 421.0
CMS1_k127_1813284_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.715e-231 729.0
CMS1_k127_1813284_1 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 499.0
CMS1_k127_1813284_2 EamA-like transporter family K03298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 389.0
CMS1_k127_1813284_3 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 312.0
CMS1_k127_1813284_4 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004038 193.0
CMS1_k127_1813284_5 chain release factor K15034 - - 0.000000000000000000000000000000000007972 139.0
CMS1_k127_1813284_6 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000003585 75.0
CMS1_k127_1819459_0 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 475.0
CMS1_k127_1819459_1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - 0.0000000000000000000000000000000000000000000000000000000000000007795 228.0
CMS1_k127_1819459_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000001621 220.0
CMS1_k127_1830670_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0 1075.0
CMS1_k127_1830670_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 9.526e-263 827.0
CMS1_k127_1830670_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000349 252.0
CMS1_k127_1830670_11 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000003839 251.0
CMS1_k127_1830670_12 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000000000000000000000000000000000000008454 220.0
CMS1_k127_1830670_13 SH3 domain K07184 - - 0.000000000000000000000000000000000000000000000000000000004434 207.0
CMS1_k127_1830670_14 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000001393 190.0
CMS1_k127_1830670_15 MoaE protein - - - 0.0000000000000000000000000000000000000000000000000004535 186.0
CMS1_k127_1830670_16 - - - - 0.000000000000000000000000000000000000000000000000008601 183.0
CMS1_k127_1830670_17 PFAM Outer membrane K06142 - - 0.00000000000000000000000000000000000000008049 156.0
CMS1_k127_1830670_18 Domain of unknown function (DUF370) K09777 - - 0.0000000000000000000000000000000001276 134.0
CMS1_k127_1830670_19 PFAM Sulfatase - - - 0.0000000000000000000000000000001137 143.0
CMS1_k127_1830670_2 Endoribonuclease that initiates mRNA decay K18682 - - 1.465e-246 769.0
CMS1_k127_1830670_21 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000005711 74.0
CMS1_k127_1830670_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 4.916e-201 631.0
CMS1_k127_1830670_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 606.0
CMS1_k127_1830670_5 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 441.0
CMS1_k127_1830670_6 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 411.0
CMS1_k127_1830670_7 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 372.0
CMS1_k127_1830670_8 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 364.0
CMS1_k127_1830670_9 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001421 270.0
CMS1_k127_1844165_0 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1269.0
CMS1_k127_1844165_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1090.0
CMS1_k127_1844165_10 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006098 263.0
CMS1_k127_1844165_11 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000008568 213.0
CMS1_k127_1844165_14 electron transfer activity K05337 - - 0.00000000000000000002101 93.0
CMS1_k127_1844165_2 Calcineurin-like phosphoesterase - - - 5.457e-252 796.0
CMS1_k127_1844165_3 PFAM phosphate transporter K03306 - - 4.15e-222 693.0
CMS1_k127_1844165_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.704e-217 692.0
CMS1_k127_1844165_5 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 1.345e-197 627.0
CMS1_k127_1844165_6 Flavodoxin - - - 8.229e-195 615.0
CMS1_k127_1844165_7 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 618.0
CMS1_k127_1844165_8 Rhodanese Homology Domain K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 374.0
CMS1_k127_1844165_9 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 325.0
CMS1_k127_1856439_0 Conserved region in glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2526.0
CMS1_k127_1856439_1 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1468.0
CMS1_k127_1856439_10 Bacterial protein of unknown function (DUF945) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005159 248.0
CMS1_k127_1856439_11 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000003532 137.0
CMS1_k127_1856439_12 DoxX - - - 0.00000000000000000000000000000000994 133.0
CMS1_k127_1856439_13 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000138 116.0
CMS1_k127_1856439_14 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000001517 115.0
CMS1_k127_1856439_15 - - - - 0.0000000003441 64.0
CMS1_k127_1856439_16 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 0.0001242 44.0
CMS1_k127_1856439_2 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 1.812e-265 820.0
CMS1_k127_1856439_3 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.06e-258 803.0
CMS1_k127_1856439_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 518.0
CMS1_k127_1856439_5 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 482.0
CMS1_k127_1856439_6 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 393.0
CMS1_k127_1856439_7 hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 337.0
CMS1_k127_1856439_8 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 314.0
CMS1_k127_1856439_9 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001771 266.0
CMS1_k127_1876945_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair - - - 0.0 1263.0
CMS1_k127_1876945_1 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 416.0
CMS1_k127_1884572_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.336e-263 822.0
CMS1_k127_1884572_1 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 1.09e-223 699.0
CMS1_k127_1884572_2 UV-endonuclease UvdE K13281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 428.0
CMS1_k127_1884572_3 oxidoreductases (related to aryl-alcohol dehydrogenases) - - - 0.0000000000000001803 81.0
CMS1_k127_1895575_0 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 6.43e-233 734.0
CMS1_k127_1895575_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 417.0
CMS1_k127_1895575_2 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 405.0
CMS1_k127_1895575_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 325.0
CMS1_k127_1895575_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 322.0
CMS1_k127_1895575_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003969 264.0
CMS1_k127_1895575_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000267 240.0
CMS1_k127_1901527_0 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 567.0
CMS1_k127_1901527_1 Belongs to the TtcA family K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 302.0
CMS1_k127_1901527_2 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 298.0
CMS1_k127_1901527_3 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 290.0
CMS1_k127_1901527_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000001452 162.0
CMS1_k127_1901527_5 - - - - 0.0000000000000000000000000000000000005843 148.0
CMS1_k127_1901527_6 - - - - 0.0001211 45.0
CMS1_k127_190276_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1828.0
CMS1_k127_190276_1 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1274.0
CMS1_k127_190276_10 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 418.0
CMS1_k127_190276_11 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 415.0
CMS1_k127_190276_12 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 404.0
CMS1_k127_190276_13 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 402.0
CMS1_k127_190276_14 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 399.0
CMS1_k127_190276_15 manually curated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 326.0
CMS1_k127_190276_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 318.0
CMS1_k127_190276_17 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009567 312.0
CMS1_k127_190276_18 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 312.0
CMS1_k127_190276_19 Nitrite/Sulfite reductase ferredoxin-like half domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 293.0
CMS1_k127_190276_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.12e-303 941.0
CMS1_k127_190276_20 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 286.0
CMS1_k127_190276_21 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000009183 217.0
CMS1_k127_190276_23 Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000000000000000000001534 184.0
CMS1_k127_190276_24 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000000008787 109.0
CMS1_k127_190276_25 endonuclease containing a URI domain K07461 - - 0.00000000000000000006546 95.0
CMS1_k127_190276_26 Domain of unknown function (DUF4388) - - - 0.0000000001785 68.0
CMS1_k127_190276_3 Firmicute fructose-1,6-bisphosphatase K04041 - 3.1.3.11 6.638e-294 913.0
CMS1_k127_190276_4 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.709e-220 690.0
CMS1_k127_190276_5 aldolase class-II K01624 - 4.1.2.13 2.458e-197 623.0
CMS1_k127_190276_6 VWA containing CoxE family protein K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 584.0
CMS1_k127_190276_7 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 565.0
CMS1_k127_190276_8 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 498.0
CMS1_k127_190276_9 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 439.0
CMS1_k127_1971838_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.663e-293 908.0
CMS1_k127_1971838_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 556.0
CMS1_k127_1971838_10 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000002345 246.0
CMS1_k127_1971838_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 513.0
CMS1_k127_1971838_3 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 486.0
CMS1_k127_1971838_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 441.0
CMS1_k127_1971838_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 392.0
CMS1_k127_1971838_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 314.0
CMS1_k127_1971838_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 298.0
CMS1_k127_1971838_8 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003244 278.0
CMS1_k127_1971838_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001762 263.0
CMS1_k127_2006722_0 belongs to the CobB CobQ family K00625,K13788 - 2.3.1.8 5.688e-251 792.0
CMS1_k127_2006722_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 3.961e-216 684.0
CMS1_k127_2006722_10 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.000000000000000000000000000000000001179 143.0
CMS1_k127_2006722_11 HupF/HypC family K04653,K04656 - - 0.0000007937 54.0
CMS1_k127_2006722_2 hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 547.0
CMS1_k127_2006722_3 N2,N2-dimethylguanosine tRNA methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 539.0
CMS1_k127_2006722_4 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 504.0
CMS1_k127_2006722_5 TIGRFAM hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 419.0
CMS1_k127_2006722_6 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 334.0
CMS1_k127_2006722_7 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 287.0
CMS1_k127_2006722_8 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003598 263.0
CMS1_k127_2006722_9 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000003403 233.0
CMS1_k127_2032675_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.098e-234 730.0
CMS1_k127_2032675_1 Bacterial extracellular solute-binding protein, family 7 - - - 3.313e-194 609.0
CMS1_k127_2032675_2 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 410.0
CMS1_k127_2032675_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000246 282.0
CMS1_k127_2032675_4 Domain of unknown function (DUF3390) K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000003259 229.0
CMS1_k127_2050658_0 ATP synthase alpha beta family, nucleotide-binding domain K02412,K03224 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 527.0
CMS1_k127_2050658_1 PFAM MgtE intracellular - - - 0.000000000000000000000000000000001698 136.0
CMS1_k127_2050658_2 bacterial-type flagellum organization K02413 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000001516 111.0
CMS1_k127_2050658_3 PFAM flagellar hook-length control K02414 - - 0.0000000000000000004434 100.0
CMS1_k127_2052579_0 PFAM sigma-54 factor interaction domain-containing protein - - - 1.483e-251 790.0
CMS1_k127_2052579_1 Alanine dehydrogenase/PNT, C-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008771 492.0
CMS1_k127_2052579_2 - - - - 0.00000000000000000000000000000000000000001118 158.0
CMS1_k127_2052579_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000004107 133.0
CMS1_k127_2052579_4 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000003877 122.0
CMS1_k127_2054462_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829,K19969,K21342 - 2.7.1.71,4.2.3.152,4.2.3.154,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 608.0
CMS1_k127_2054462_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 526.0
CMS1_k127_206216_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 3.291e-213 676.0
CMS1_k127_206216_1 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 450.0
CMS1_k127_206216_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000008402 176.0
CMS1_k127_2083762_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1255.0
CMS1_k127_2083762_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1123.0
CMS1_k127_2083762_10 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 368.0
CMS1_k127_2083762_11 PFAM NADH Ubiquinone plastoquinone K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 377.0
CMS1_k127_2083762_12 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 322.0
CMS1_k127_2083762_13 ThiF family K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 319.0
CMS1_k127_2083762_14 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 299.0
CMS1_k127_2083762_16 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009301 268.0
CMS1_k127_2083762_17 ThiF family K03148 - 2.7.7.73 0.00000000000000000000000000000000000000000000000000000000000000007861 233.0
CMS1_k127_2083762_18 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000006774 210.0
CMS1_k127_2083762_19 Bacterial inner membrane protein - - - 0.0000000000000000000000000000000000000000000000000000117 194.0
CMS1_k127_2083762_2 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.0 1058.0
CMS1_k127_2083762_20 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000127 159.0
CMS1_k127_2083762_21 Rubrerythrin - - - 0.0000000000000000000000000000000000000003801 155.0
CMS1_k127_2083762_23 COG0456 Acetyltransferases K03789 - 2.3.1.128 0.0000000000000000000000000000001377 129.0
CMS1_k127_2083762_24 4Fe-4S single cluster domain K05337 - - 0.0000000000000000000000003117 105.0
CMS1_k127_2083762_25 - - - - 0.00000000000000000000006774 101.0
CMS1_k127_2083762_26 - - - - 0.00000000000000000004402 90.0
CMS1_k127_2083762_27 - - - - 0.000000000000004783 87.0
CMS1_k127_2083762_28 Protein of unknown function (DUF3135) - - - 0.00000000000003985 79.0
CMS1_k127_2083762_29 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.000000007859 57.0
CMS1_k127_2083762_3 Proton-conducting membrane transporter K12137 - - 9.778e-247 777.0
CMS1_k127_2083762_4 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 9.04e-243 758.0
CMS1_k127_2083762_5 response regulator receiver K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 591.0
CMS1_k127_2083762_6 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 417.0
CMS1_k127_2083762_7 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 409.0
CMS1_k127_2083762_8 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 403.0
CMS1_k127_2083762_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 405.0
CMS1_k127_2084046_0 Formate dehydrogenase, alpha subunit K00123 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009326,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016622,GO:0016903,GO:0018282,GO:0018289,GO:0018291,GO:0019538,GO:0022607,GO:0031163,GO:0032991,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0047111,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:1901564,GO:1902494 1.17.1.9 0.0 1268.0
CMS1_k127_2084046_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.058e-220 689.0
CMS1_k127_2084046_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.00000000000000003043 86.0
CMS1_k127_2084046_11 Putative regulatory protein - - - 0.0000000001234 66.0
CMS1_k127_2084046_2 Mechanosensitive ion channel K22044 - - 8.762e-195 634.0
CMS1_k127_2084046_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 415.0
CMS1_k127_2084046_4 4Fe-4S binding domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 391.0
CMS1_k127_2084046_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 350.0
CMS1_k127_2084046_6 formate dehydrogenase K00127 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 342.0
CMS1_k127_2084046_7 Mo-molybdopterin cofactor metabolic process K03750,K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002823 278.0
CMS1_k127_2084046_8 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000054 171.0
CMS1_k127_2084046_9 Protein of unknown function (DUF523) - - - 0.00000000000000000000000000000000000000005547 155.0
CMS1_k127_208476_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 558.0
CMS1_k127_208476_1 Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 334.0
CMS1_k127_208476_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005347 276.0
CMS1_k127_2095974_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 471.0
CMS1_k127_2095974_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 375.0
CMS1_k127_2095974_2 Bacterial export proteins, family 1 K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 332.0
CMS1_k127_2095974_3 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000001089 193.0
CMS1_k127_2095974_4 Role in flagellar biosynthesis K02420,K03227 - - 0.0000000000000000000000000000001029 126.0
CMS1_k127_2102064_0 Histidine kinase - - - 1.79e-278 878.0
CMS1_k127_2102064_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 524.0
CMS1_k127_2102064_10 ferric iron binding K02380 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008199,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0051604,GO:0055114,GO:0071704,GO:1901564 - 0.0000000000000000000000000004047 124.0
CMS1_k127_2102064_12 beta-galactosidase activity - - - 0.00000004017 65.0
CMS1_k127_2102064_13 DSBA-like thioredoxin domain - - - 0.00005664 47.0
CMS1_k127_2102064_2 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 469.0
CMS1_k127_2102064_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 424.0
CMS1_k127_2102064_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 397.0
CMS1_k127_2102064_5 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 391.0
CMS1_k127_2102064_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 312.0
CMS1_k127_2102064_7 Formate dehydrogenase, alpha subunit K00123 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009326,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016622,GO:0016903,GO:0018282,GO:0018289,GO:0018291,GO:0019538,GO:0022607,GO:0031163,GO:0032991,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0047111,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:1901564,GO:1902494 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000278 245.0
CMS1_k127_2102064_8 protein complex oligomerization - - - 0.00000000000000000000000000000000000000000000000003128 186.0
CMS1_k127_2102064_9 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000704 160.0
CMS1_k127_2107707_0 TIGRFAM thiamine biosynthesis protein ThiC K22466 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.23 2.449e-228 714.0
CMS1_k127_2107707_1 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 3.384e-205 651.0
CMS1_k127_2107707_2 NlpC/P60 family K13694,K13695 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 343.0
CMS1_k127_2107707_3 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000001038 88.0
CMS1_k127_2107707_4 diguanylate cyclase activity - - - 0.0000000001154 64.0
CMS1_k127_2108687_0 Domain of unknown function (DUF3482) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 520.0
CMS1_k127_2108687_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 313.0
CMS1_k127_2108687_2 Protein of unknown function (DUF2868) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 307.0
CMS1_k127_2108687_3 Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000000000000000000263 152.0
CMS1_k127_2116059_0 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 526.0
CMS1_k127_2116059_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 496.0
CMS1_k127_2116059_2 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 402.0
CMS1_k127_2116059_3 nitric oxide reductase activity K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000003246 194.0
CMS1_k127_2116059_4 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000008095 163.0
CMS1_k127_2116059_5 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000006899 137.0
CMS1_k127_2116059_6 DsrE/DsrF-like family - - - 0.00000000000000000000000000185 119.0
CMS1_k127_213698_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667,K01668 - 4.1.99.1,4.1.99.2 1.02e-227 713.0
CMS1_k127_213698_1 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 602.0
CMS1_k127_213698_2 Fumarylacetoacetase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 518.0
CMS1_k127_213698_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006027 286.0
CMS1_k127_213698_4 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000004126 114.0
CMS1_k127_213698_5 histidyl-tRNA synthetase - - - 0.00000000000001808 81.0
CMS1_k127_2137373_0 Peptidase M16C associated K06972 - - 0.0 1275.0
CMS1_k127_2137373_1 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000003427 224.0
CMS1_k127_2137373_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000001876 195.0
CMS1_k127_2137373_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000003871 191.0
CMS1_k127_2137373_4 Roadblock/LC7 domain K07131 - - 0.0000000000000000000000000001046 120.0
CMS1_k127_2137373_5 COG0822 NifU homolog involved in Fe-S cluster formation - - - 0.00000000000001639 74.0
CMS1_k127_2144614_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.854e-265 833.0
CMS1_k127_2144614_1 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 456.0
CMS1_k127_2144614_2 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 317.0
CMS1_k127_2144614_3 prephenate dehydrogenase (NADP+) activity K00077,K00210,K06410,K14170,K16182 - 1.1.1.169,1.3.1.12,4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000002039 197.0
CMS1_k127_2144614_4 (twin-arginine translocation) pathway signal - - - 0.0000000000000000000000000000000004052 134.0
CMS1_k127_2144614_5 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000002422 74.0
CMS1_k127_2144614_6 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0000000005733 59.0
CMS1_k127_2144614_7 EamA-like transporter family - - - 0.0002801 46.0
CMS1_k127_2149430_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.27e-300 927.0
CMS1_k127_2149430_1 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 535.0
CMS1_k127_2149430_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 473.0
CMS1_k127_2149430_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 353.0
CMS1_k127_2149430_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000001949 168.0
CMS1_k127_2149430_5 metal cluster binding - - - 0.000000000000000000000000000000000003145 137.0
CMS1_k127_2182256_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 9.29e-310 956.0
CMS1_k127_2182256_1 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 1.015e-214 677.0
CMS1_k127_2182256_10 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
CMS1_k127_2182256_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 308.0
CMS1_k127_2182256_12 Putative tRNA binding domain K06878 - - 0.0000000000000000000000000000000000000000000000000002067 186.0
CMS1_k127_2182256_13 RNA recognition motif - - - 0.0000000000000000000000000000000007799 134.0
CMS1_k127_2182256_14 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000003502 124.0
CMS1_k127_2182256_15 MerR HTH family regulatory protein K18997 - - 0.00000000000000000000000001805 111.0
CMS1_k127_2182256_2 sulphate transporter K03321 - - 9.37e-212 674.0
CMS1_k127_2182256_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 559.0
CMS1_k127_2182256_4 PFAM Pyridine nucleotide-disulphide oxidoreductase K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 532.0
CMS1_k127_2182256_5 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 500.0
CMS1_k127_2182256_6 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 476.0
CMS1_k127_2182256_7 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 449.0
CMS1_k127_2182256_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 440.0
CMS1_k127_2182256_9 Heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 371.0
CMS1_k127_2197110_0 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 508.0
CMS1_k127_2197110_1 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 464.0
CMS1_k127_2197110_2 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 355.0
CMS1_k127_2197110_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 321.0
CMS1_k127_2197110_4 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 315.0
CMS1_k127_2197110_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 302.0
CMS1_k127_2197110_6 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 302.0
CMS1_k127_2197110_7 Mannosyltransferase (PIG-V) - - - 0.00000000000000000000000000000000000000000000000000000000000000000158 240.0
CMS1_k127_2197110_8 SH3 domain - - - 0.00000000000000000000003184 104.0
CMS1_k127_2197110_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000038 96.0
CMS1_k127_2224290_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.0 1360.0
CMS1_k127_2224290_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1115.0
CMS1_k127_2224290_10 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000002963 140.0
CMS1_k127_2224290_2 Required for morphogenesis under gluconeogenic growth conditions - - - 1.626e-242 771.0
CMS1_k127_2224290_3 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 448.0
CMS1_k127_2224290_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000801 427.0
CMS1_k127_2224290_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 373.0
CMS1_k127_2224290_6 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000001118 257.0
CMS1_k127_2224290_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007209 250.0
CMS1_k127_2224290_8 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000002136 210.0
CMS1_k127_2224290_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000001491 189.0
CMS1_k127_2225328_0 4Fe-4S dicluster domain - - - 3.47e-321 993.0
CMS1_k127_2225328_1 acyl-coa dehydrogenase - - - 4.103e-196 616.0
CMS1_k127_2225328_10 - - - - 0.00000000000000000000000000000005526 127.0
CMS1_k127_2225328_11 Thioesterase K12500 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0047617,GO:0055114,GO:0071704,GO:0072329,GO:1901575 - 0.0000000000000000000000000000005625 126.0
CMS1_k127_2225328_12 addiction module antidote protein HigA K21498 - - 0.00000000000000008324 79.0
CMS1_k127_2225328_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 516.0
CMS1_k127_2225328_3 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 443.0
CMS1_k127_2225328_4 PFAM Electron transfer flavoprotein alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 438.0
CMS1_k127_2225328_5 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 388.0
CMS1_k127_2225328_6 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001498 276.0
CMS1_k127_2225328_7 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000001197 229.0
CMS1_k127_2225328_8 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K21902 - - 0.000000000000000000000000000000000000000000009231 166.0
CMS1_k127_2225328_9 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000002971 149.0
CMS1_k127_2227251_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 542.0
CMS1_k127_2234715_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.072e-194 610.0
CMS1_k127_2234715_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 285.0
CMS1_k127_2234715_2 flavin reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005254 249.0
CMS1_k127_2234715_3 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000000000000001977 149.0
CMS1_k127_2234715_4 Domain of unknown function (DUF4388) - - - 0.00008544 47.0
CMS1_k127_2247512_0 COG1653 ABC-type sugar transport system, periplasmic component K17321 - - 7.986e-318 978.0
CMS1_k127_2247512_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.056e-317 980.0
CMS1_k127_2247512_10 COG1175 ABC-type sugar transport systems permease components K17322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 484.0
CMS1_k127_2247512_11 diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 507.0
CMS1_k127_2247512_12 ABC-type sugar transport system, permease component K17323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 460.0
CMS1_k127_2247512_13 Belongs to the ABC transporter superfamily K17325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 465.0
CMS1_k127_2247512_14 Belongs to the ABC transporter superfamily K17324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 453.0
CMS1_k127_2247512_15 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 398.0
CMS1_k127_2247512_16 DeoR C terminal sensor domain K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 389.0
CMS1_k127_2247512_17 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 396.0
CMS1_k127_2247512_18 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 389.0
CMS1_k127_2247512_19 Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 381.0
CMS1_k127_2247512_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.231e-228 717.0
CMS1_k127_2247512_20 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 375.0
CMS1_k127_2247512_21 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 361.0
CMS1_k127_2247512_22 LysR substrate binding domain K11921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 331.0
CMS1_k127_2247512_23 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 295.0
CMS1_k127_2247512_24 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003884 237.0
CMS1_k127_2247512_25 response regulator K02657,K03413 - - 0.00000000000000000000000000000000000000000000008239 190.0
CMS1_k127_2247512_26 Small integral membrane protein - - - 0.000000000000000000000000000000000008132 138.0
CMS1_k127_2247512_27 PFAM response regulator receiver K03413 - - 0.0000000000000000000002433 113.0
CMS1_k127_2247512_28 IMP dehydrogenase activity - - - 0.00000000000000002493 87.0
CMS1_k127_2247512_29 toxin-antitoxin pair type II binding - - - 0.0001857 44.0
CMS1_k127_2247512_3 PFAM Histone deacetylase K04768 - - 2.704e-210 661.0
CMS1_k127_2247512_4 FAD dependent oxidoreductase K00111 - 1.1.5.3 6.156e-201 640.0
CMS1_k127_2247512_5 PFAM Hydantoinase oxoprolinase - - - 6.42e-201 640.0
CMS1_k127_2247512_6 PFAM Xanthine uracil vitamin C permease K02824 - - 1.613e-199 629.0
CMS1_k127_2247512_7 manually curated - - - 5.329e-198 625.0
CMS1_k127_2247512_8 PFAM chemotaxis sensory transducer - - - 1.759e-197 639.0
CMS1_k127_2247512_9 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 4.638e-196 623.0
CMS1_k127_225016_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1866.0
CMS1_k127_225016_1 chorismate binding enzyme K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 611.0
CMS1_k127_225016_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000001326 131.0
CMS1_k127_225016_3 - - - - 0.00000000000000000000000000002571 119.0
CMS1_k127_227624_0 Possible lysine decarboxylase K06966 - 3.2.2.10 7.707e-316 980.0
CMS1_k127_227624_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 329.0
CMS1_k127_228297_0 thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 1.051e-308 954.0
CMS1_k127_228297_1 Lysine-2,3-aminomutase K01843 - 5.4.3.2 1.039e-228 715.0
CMS1_k127_228297_10 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000001701 75.0
CMS1_k127_228297_11 transcriptional - - - 0.00000002273 56.0
CMS1_k127_228297_2 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 527.0
CMS1_k127_228297_3 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 474.0
CMS1_k127_228297_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 466.0
CMS1_k127_228297_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 378.0
CMS1_k127_228297_6 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 302.0
CMS1_k127_228297_7 PFAM GCN5-related N-acetyltransferase K21935 - 2.3.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000002206 265.0
CMS1_k127_228297_8 acetolactate synthase activity K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000446 231.0
CMS1_k127_228297_9 Desulfoferrodoxin K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000003878 194.0
CMS1_k127_2310189_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.303e-226 707.0
CMS1_k127_2310189_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 297.0
CMS1_k127_2310189_2 epsilon subunit K02114 - - 0.000000000000000000000000000000000001525 143.0
CMS1_k127_2310189_3 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000000000000000000000001092 120.0
CMS1_k127_2310189_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000004443 119.0
CMS1_k127_2310189_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000165 89.0
CMS1_k127_2314813_0 ATP-grasp domain - - - 3.201e-252 800.0
CMS1_k127_2340657_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.131e-227 711.0
CMS1_k127_2340657_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 368.0
CMS1_k127_235252_0 Aminotransferase class-V K00281,K00283 - 1.4.4.2 1.034e-246 768.0
CMS1_k127_235252_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 2.586e-210 661.0
CMS1_k127_235252_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 406.0
CMS1_k127_235252_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000008283 241.0
CMS1_k127_235252_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000003231 196.0
CMS1_k127_235252_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000003701 194.0
CMS1_k127_235252_6 Belongs to the GcvT family K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000009398 181.0
CMS1_k127_235252_7 Uncharacterized lipoprotein K07286 - - 0.000000000000000000000000000000004605 140.0
CMS1_k127_2386873_0 4Fe-4S dicluster domain - - - 4.56e-288 896.0
CMS1_k127_2386873_1 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 8.625e-242 757.0
CMS1_k127_2386873_2 PFAM Electron transfer flavoprotein alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 404.0
CMS1_k127_2386873_3 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 377.0
CMS1_k127_2386873_4 GPR1/FUN34/yaaH family K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 333.0
CMS1_k127_2386873_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000005859 51.0
CMS1_k127_2397394_0 Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 477.0
CMS1_k127_2397394_1 ferredoxin oxidoreductase K00186 - 1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 381.0
CMS1_k127_2397394_2 Conserved region in glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 337.0
CMS1_k127_2397394_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 290.0
CMS1_k127_2397394_4 4Fe-4S dicluster domain K00188 - 1.2.7.7 0.00000000000000000000302 95.0
CMS1_k127_2447557_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 3.749e-240 747.0
CMS1_k127_2447557_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 6.142e-198 630.0
CMS1_k127_2447557_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 6.108e-196 615.0
CMS1_k127_2447557_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 541.0
CMS1_k127_2447557_4 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 296.0
CMS1_k127_2447557_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000002228 221.0
CMS1_k127_2463662_0 Enoyl-(Acyl carrier protein) reductase K16066 - 1.1.1.381 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 383.0
CMS1_k127_2463662_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001898 254.0
CMS1_k127_2463662_2 PFAM transposase IS4 family protein - - - 0.0000000000000004077 78.0
CMS1_k127_246614_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.429e-213 670.0
CMS1_k127_246614_1 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 2.715e-200 629.0
CMS1_k127_246614_2 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 616.0
CMS1_k127_246614_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 473.0
CMS1_k127_246614_4 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004384 244.0
CMS1_k127_246614_5 phosphate synthase K01493,K01663 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0004359,GO:0005575,GO:0005622,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016811,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.12 0.00000000000000000000005791 99.0
CMS1_k127_2524346_0 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 516.0
CMS1_k127_2524346_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 424.0
CMS1_k127_2524346_2 MlaD protein K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 310.0
CMS1_k127_2524346_3 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000000000000001097 206.0
CMS1_k127_2524346_4 (GGDEF) domain - - - 0.0000000002944 65.0
CMS1_k127_2524346_5 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000001729 57.0
CMS1_k127_2526734_0 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 532.0
CMS1_k127_2526734_1 dTDP-4-dehydrorhamnose reductase activity K00067,K19997 - 1.1.1.133,5.1.3.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 408.0
CMS1_k127_2526734_2 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000005302 132.0
CMS1_k127_2532869_0 ABC transporter K05776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 447.0
CMS1_k127_2532869_1 aspartate K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 308.0
CMS1_k127_2532869_2 - - - - 0.00000000000000000000000000000000002078 141.0
CMS1_k127_2565155_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.939e-288 891.0
CMS1_k127_2565155_1 diguanylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007163 278.0
CMS1_k127_2565155_2 Universal stress protein family - - - 0.0000000000000000000000000001376 120.0
CMS1_k127_2614181_0 acyl-coa dehydrogenase - - - 5.096e-200 629.0
CMS1_k127_2614181_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 593.0
CMS1_k127_2614181_2 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 525.0
CMS1_k127_2614181_3 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 439.0
CMS1_k127_2614181_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000002046 222.0
CMS1_k127_2614181_5 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000005511 191.0
CMS1_k127_2638877_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 3.075e-304 955.0
CMS1_k127_2638877_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 9.41e-256 799.0
CMS1_k127_2638877_2 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 543.0
CMS1_k127_2638877_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000000000000000000000000000006094 219.0
CMS1_k127_2638877_4 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000000000000000009061 212.0
CMS1_k127_2638877_5 Belongs to the phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000005785 172.0
CMS1_k127_2638877_6 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000007394 106.0
CMS1_k127_2660964_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470,K02622 - 5.99.1.3 6.83e-321 992.0
CMS1_k127_2660964_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 9.58e-321 993.0
CMS1_k127_2660964_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 584.0
CMS1_k127_2660964_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 316.0
CMS1_k127_2660964_4 PFAM peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005384 282.0
CMS1_k127_2660964_5 - - - - 0.0000000000000000000000000000002629 123.0
CMS1_k127_2660964_6 CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000008087 87.0
CMS1_k127_267510_0 AAA ATPase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 597.0
CMS1_k127_267510_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 561.0
CMS1_k127_267510_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 442.0
CMS1_k127_267510_3 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
CMS1_k127_267510_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 393.0
CMS1_k127_267510_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 321.0
CMS1_k127_2680637_0 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 1.413e-215 678.0
CMS1_k127_2680637_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 538.0
CMS1_k127_2680637_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 451.0
CMS1_k127_2680637_3 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000001971 211.0
CMS1_k127_2680637_4 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000002725 81.0
CMS1_k127_2687745_0 SNF2 family N-terminal domain - - - 0.0 1532.0
CMS1_k127_2687745_1 Cache 3/Cache 2 fusion domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 453.0
CMS1_k127_2687745_2 Protein of unknown function (DUF2971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 426.0
CMS1_k127_2687745_3 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 307.0
CMS1_k127_2687745_4 response to cobalt ion - - - 0.000000000000000000000000000000000000000000000001698 179.0
CMS1_k127_2700737_0 Valine--pyruvate aminotransferase K00835 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009042,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0030632,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 567.0
CMS1_k127_2700737_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 462.0
CMS1_k127_2700737_2 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008939 400.0
CMS1_k127_2700737_3 PFAM nucleoside recognition domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004363 286.0
CMS1_k127_2700737_4 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000003842 237.0
CMS1_k127_2700737_5 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000001102 218.0
CMS1_k127_2700737_6 response to cobalt ion - - - 0.00000000000000000000000000000000000000000000000000000000009171 209.0
CMS1_k127_2700737_7 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000000000007539 168.0
CMS1_k127_2700737_9 - - - - 0.000000000000001269 79.0
CMS1_k127_2708799_0 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.0 1139.0
CMS1_k127_2708799_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 352.0
CMS1_k127_2708799_2 Mitochondrial fission ELM1 K07276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 304.0
CMS1_k127_2713916_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 1.635e-288 900.0
CMS1_k127_2713916_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.808e-254 793.0
CMS1_k127_2713916_10 S4 RNA-binding domain K04762 - - 0.0000000000000000000000000000000000000001682 155.0
CMS1_k127_2713916_11 - - - - 0.00000000000000000000000000000000004713 142.0
CMS1_k127_2713916_12 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000008196 135.0
CMS1_k127_2713916_13 Mo-molybdopterin cofactor metabolic process K03154 - - 0.00000000000000000000002922 100.0
CMS1_k127_2713916_2 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 497.0
CMS1_k127_2713916_3 PFAM peptidase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 476.0
CMS1_k127_2713916_4 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 365.0
CMS1_k127_2713916_5 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 351.0
CMS1_k127_2713916_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 306.0
CMS1_k127_2713916_7 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000006577 244.0
CMS1_k127_2713916_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000001524 207.0
CMS1_k127_2713916_9 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000185 179.0
CMS1_k127_2743008_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 549.0
CMS1_k127_2743008_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 346.0
CMS1_k127_2743008_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00000000000000000000000002755 115.0
CMS1_k127_2743008_3 PFAM Radical SAM - - - 0.0000000000000000000002438 97.0
CMS1_k127_2744505_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1069.0
CMS1_k127_2744505_1 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 466.0
CMS1_k127_2744505_2 4Fe-4S dicluster domain K00196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 291.0
CMS1_k127_2744505_3 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.0000000000000000000000000000000000002362 151.0
CMS1_k127_2744505_4 transposase activity - - - 0.0000000000000000001602 90.0
CMS1_k127_2744505_5 Transposase K07491 - - 0.0000000000001418 72.0
CMS1_k127_2744505_6 Tetratricopeptide repeat - - - 0.00000000000975 75.0
CMS1_k127_2744505_7 COG COG3385 FOG Transposase and inactivated derivatives - - - 0.0000000003016 65.0
CMS1_k127_2744505_8 positive regulation of growth rate - - - 0.0000000003459 68.0
CMS1_k127_2747417_0 sigma-54 factor interaction domain-containing protein K02667 - - 4.669e-203 640.0
CMS1_k127_2747417_1 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 526.0
CMS1_k127_2747417_2 PFAM metal-dependent phosphohydrolase HD sub - - - 0.00000000000000000000000000000000000000000000000000003235 193.0
CMS1_k127_2763825_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 432.0
CMS1_k127_2763825_1 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 339.0
CMS1_k127_2763825_2 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000007731 194.0
CMS1_k127_2764694_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 527.0
CMS1_k127_2764694_1 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 480.0
CMS1_k127_2764694_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 473.0
CMS1_k127_2764694_3 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 362.0
CMS1_k127_2764694_5 PFAM von Willebrand factor type A domain K07114 - - 0.00003487 47.0
CMS1_k127_2769522_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 1.409e-229 722.0
CMS1_k127_2769522_1 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 418.0
CMS1_k127_2769522_2 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001536 241.0
CMS1_k127_2769522_3 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000003042 187.0
CMS1_k127_2778889_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003579 276.0
CMS1_k127_2778889_1 response regulator, receiver - - - 0.0000000000000000000000000002978 125.0
CMS1_k127_2778889_2 PFAM response regulator receiver - - - 0.000000147 58.0
CMS1_k127_2778889_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.000001263 58.0
CMS1_k127_2778889_4 Histidine kinase K02660,K07677,K11525 - 2.7.13.3 0.0001007 50.0
CMS1_k127_2790749_0 Elongation factor Tu domain 2 K06207 - - 0.0 1037.0
CMS1_k127_2790749_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.502e-291 910.0
CMS1_k127_2790749_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000267 258.0
CMS1_k127_2790749_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000006304 233.0
CMS1_k127_2790749_12 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000000000000000000000000000000000000008029 224.0
CMS1_k127_2790749_13 DsrE/DsrF-like family K06039 - - 0.0000000000000000000000000000000000000000000000000000000000008681 211.0
CMS1_k127_2790749_14 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000004495 205.0
CMS1_k127_2790749_15 Uncharacterized protein conserved in bacteria (DUF2058) K09912 - - 0.0000000000000000000000000000000000000000000000001402 182.0
CMS1_k127_2790749_16 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000001329 164.0
CMS1_k127_2790749_17 - - - - 0.0000000000000000000000000000009598 129.0
CMS1_k127_2790749_18 - - - - 0.0000000004742 66.0
CMS1_k127_2790749_2 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 3.251e-244 765.0
CMS1_k127_2790749_3 type II secretion system protein E K02454,K02652,K12276 - - 1.508e-207 664.0
CMS1_k127_2790749_4 type III restriction protein res subunit - - - 9.721e-195 617.0
CMS1_k127_2790749_5 PFAM Pyridoxal-dependent decarboxylase K01580,K13745 - 4.1.1.15,4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 571.0
CMS1_k127_2790749_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 445.0
CMS1_k127_2790749_8 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 316.0
CMS1_k127_2790749_9 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
CMS1_k127_2792444_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 3.659e-230 715.0
CMS1_k127_2792444_1 fumarylacetoacetate hydrolase (fumarylacetoacetase) K01555 GO:0003674,GO:0003824,GO:0004334,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006558,GO:0006559,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 526.0
CMS1_k127_2792444_10 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667,K01668 - 4.1.99.1,4.1.99.2 0.000001183 52.0
CMS1_k127_2792444_2 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 481.0
CMS1_k127_2792444_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 429.0
CMS1_k127_2792444_4 PFAM PrpF protein K20451 - 5.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 380.0
CMS1_k127_2792444_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000504 273.0
CMS1_k127_2792444_6 histidine-tRNA ligase activity K01892,K02502 - 6.1.1.21 0.0000000000000000000000000000000000000000000001041 181.0
CMS1_k127_2792444_7 Transition state regulatory protein AbrB K07120 - - 0.00000000000000000000000000000000000000001669 158.0
CMS1_k127_2792444_8 PFAM transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000647 141.0
CMS1_k127_2792444_9 Belongs to the beta-eliminating lyase family K01667 - 4.1.99.1 0.0000009963 51.0
CMS1_k127_2798407_0 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 5.206e-198 624.0
CMS1_k127_2798407_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 538.0
CMS1_k127_2798407_2 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 511.0
CMS1_k127_2798407_3 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 347.0
CMS1_k127_2798407_4 PFAM aminotransferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 319.0
CMS1_k127_2798407_5 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000002917 167.0
CMS1_k127_2798407_6 Toxin-antitoxin system, antitoxin component, HicB family - - - 0.000000003511 60.0
CMS1_k127_2798407_7 Belongs to the SlyX family K03745 - - 0.00009303 49.0
CMS1_k127_2807789_0 amino acid carrier protein K03310 - - 2.842e-244 759.0
CMS1_k127_2807789_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 1.308e-205 643.0
CMS1_k127_2807789_2 PFAM sigma-54 factor interaction domain-containing protein K03721 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 445.0
CMS1_k127_2807789_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000003477 64.0
CMS1_k127_2809877_0 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000882 279.0
CMS1_k127_2809877_1 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000019 211.0
CMS1_k127_2809877_2 Protein of unknown function (DUF1018) - - - 0.0000000000000000001099 94.0
CMS1_k127_2809877_3 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000005368 83.0
CMS1_k127_281127_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 1.888e-217 683.0
CMS1_k127_281127_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 1.51e-200 631.0
CMS1_k127_281127_2 PFAM Iron-containing alcohol dehydrogenase K19714 - 1.1.3.48 6.707e-197 617.0
CMS1_k127_281127_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 595.0
CMS1_k127_281127_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 430.0
CMS1_k127_281127_5 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 379.0
CMS1_k127_281127_6 AzlC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 318.0
CMS1_k127_281127_7 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 307.0
CMS1_k127_281127_8 helix_turn_helix ASNC type K03718,K03719 - - 0.0000000000000000000000000000000000000000000000002004 182.0
CMS1_k127_281127_9 PFAM Branched-chain amino acid transport - - - 0.000000000000000000001912 97.0
CMS1_k127_2815339_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1032.0
CMS1_k127_2815339_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 443.0
CMS1_k127_2815339_2 LysR substrate binding domain K05596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 400.0
CMS1_k127_2815339_3 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 348.0
CMS1_k127_2815339_4 LysE type translocator K06895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 301.0
CMS1_k127_2815339_5 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 303.0
CMS1_k127_2815339_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000002679 220.0
CMS1_k127_2815339_7 PFAM Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000002389 169.0
CMS1_k127_2815339_8 - - - - 0.00000000000000000000009731 102.0
CMS1_k127_2815339_9 YbaK prolyl-tRNA synthetase associated region - - - 0.0000000000002662 72.0
CMS1_k127_2817264_0 Belongs to the BCCT transporter (TC 2.A.15) family K02168,K05020 - - 2.039e-227 716.0
CMS1_k127_2817264_1 PFAM Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 564.0
CMS1_k127_2817264_2 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 516.0
CMS1_k127_2817264_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 387.0
CMS1_k127_2817264_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 334.0
CMS1_k127_2817264_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000006188 231.0
CMS1_k127_2817264_6 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000001655 79.0
CMS1_k127_2817264_7 Glutaredoxin K03671 - - 0.0000000000005289 72.0
CMS1_k127_2824439_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1251.0
CMS1_k127_2824439_1 Region found in RelA / SpoT proteins K00951 - 2.7.6.5 2.213e-309 961.0
CMS1_k127_2824439_10 domain, Protein K02450,K03112,K15539 - - 0.00000000000000000000000000000000000000000000000000000000000001687 237.0
CMS1_k127_2824439_11 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000001097 218.0
CMS1_k127_2824439_12 ribonucleoside-diphosphate reductase activity K00525,K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000001065 183.0
CMS1_k127_2824439_13 - - - - 0.0000000000000000000000000000000002935 134.0
CMS1_k127_2824439_14 bacterial-type flagellum-dependent cell motility K02388,K02390,K02396,K03418,K07004,K15125,K21012 - 3.5.1.56 0.0000000000000000000000000478 112.0
CMS1_k127_2824439_15 Belongs to the HesB IscA family - - - 0.0000000000000000000000007016 105.0
CMS1_k127_2824439_17 protein transport across the cell outer membrane K02457,K08084 - - 0.0000000000009093 75.0
CMS1_k127_2824439_18 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000002805 70.0
CMS1_k127_2824439_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 3.787e-197 620.0
CMS1_k127_2824439_3 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 582.0
CMS1_k127_2824439_4 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 569.0
CMS1_k127_2824439_5 General secretion pathway protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 438.0
CMS1_k127_2824439_6 Type II secretory pathway, component ExeA K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 328.0
CMS1_k127_2824439_7 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001941 280.0
CMS1_k127_2824439_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004666 279.0
CMS1_k127_2824439_9 endonuclease III K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005008 272.0
CMS1_k127_2829448_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0 1070.0
CMS1_k127_2829448_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 299.0
CMS1_k127_2829448_2 PFAM ATP-binding region ATPase domain protein K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002806 290.0
CMS1_k127_2829448_3 UMP catabolic process K01101 GO:0000121,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030145,GO:0042578,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0046475,GO:0046486,GO:0046503,GO:0046872,GO:0046914,GO:0046983,GO:0050897,GO:0071704,GO:1901575 3.1.3.41 0.000000000000000000000000000000000000000000000000000000456 195.0
CMS1_k127_284200_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 9.158e-236 741.0
CMS1_k127_284200_1 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003252 254.0
CMS1_k127_2844650_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 548.0
CMS1_k127_2844650_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 499.0
CMS1_k127_2844650_2 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 355.0
CMS1_k127_2844650_3 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 313.0
CMS1_k127_2844650_4 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007586 279.0
CMS1_k127_2844650_5 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000008388 105.0
CMS1_k127_2844650_6 Aldo/keto reductase family - - - 0.000000000000000009299 84.0
CMS1_k127_2844650_7 histidine kinase A domain protein - - - 0.0000000000000982 72.0
CMS1_k127_2850572_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.542e-292 904.0
CMS1_k127_2850572_1 Oligopeptidase F K08602 - - 1.585e-261 818.0
CMS1_k127_2850572_10 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 427.0
CMS1_k127_2850572_11 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 388.0
CMS1_k127_2850572_12 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 382.0
CMS1_k127_2850572_13 metal-dependent phosphohydrolase HD region K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 381.0
CMS1_k127_2850572_14 PFAM permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 350.0
CMS1_k127_2850572_15 Single cache domain 3 K02476 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 361.0
CMS1_k127_2850572_16 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
CMS1_k127_2850572_17 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 291.0
CMS1_k127_2850572_18 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002481 277.0
CMS1_k127_2850572_19 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005487 235.0
CMS1_k127_2850572_2 Protein conserved in bacteria K07793 - - 2.457e-244 766.0
CMS1_k127_2850572_20 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.0000000000000000000000000000000000000000000000000000000001016 208.0
CMS1_k127_2850572_21 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000008785 179.0
CMS1_k127_2850572_22 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000000001167 158.0
CMS1_k127_2850572_23 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000001812 153.0
CMS1_k127_2850572_24 and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000000008284 141.0
CMS1_k127_2850572_25 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.00000000000000000000000000000001255 130.0
CMS1_k127_2850572_26 Predicted permease K07089 - - 0.000000000000000373 80.0
CMS1_k127_2850572_27 Covalent carrier of the coenzyme of citrate lyase K01646 - - 0.000000000000001497 80.0
CMS1_k127_2850572_28 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000002527 78.0
CMS1_k127_2850572_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 5.764e-228 711.0
CMS1_k127_2850572_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.593e-216 685.0
CMS1_k127_2850572_5 galactose-1-phosphate uridylyltransferase - - - 3.31e-207 657.0
CMS1_k127_2850572_6 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 564.0
CMS1_k127_2850572_7 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 539.0
CMS1_k127_2850572_8 Protein conserved in bacteria K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 434.0
CMS1_k127_2850572_9 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 425.0
CMS1_k127_2865355_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 511.0
CMS1_k127_2865355_1 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000001761 142.0
CMS1_k127_2884526_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 543.0
CMS1_k127_2884526_1 transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 291.0
CMS1_k127_2884526_2 - - - - 0.000000000000000000000000000000000000000006428 157.0
CMS1_k127_2884526_3 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000003927 138.0
CMS1_k127_2884526_4 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000001834 85.0
CMS1_k127_2884526_6 Transposase IS200 like K07491 - - 0.0000006808 53.0
CMS1_k127_2904969_0 AMP-binding enzyme K00666 - - 9.882e-247 768.0
CMS1_k127_2904969_1 Seven times multi-haem cytochrome CxxCH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 507.0
CMS1_k127_2905773_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1043.0
CMS1_k127_2905773_1 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.293e-288 894.0
CMS1_k127_2905773_10 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000803 275.0
CMS1_k127_2905773_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 270.0
CMS1_k127_2905773_12 PFAM transcription factor CarD K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001141 248.0
CMS1_k127_2905773_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000004723 222.0
CMS1_k127_2905773_14 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000001926 218.0
CMS1_k127_2905773_15 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000000000000002156 149.0
CMS1_k127_2905773_16 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000002351 140.0
CMS1_k127_2905773_17 PFAM FeoA K04758 - - 0.0000000000000000000000000000000002469 134.0
CMS1_k127_2905773_18 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000009691 130.0
CMS1_k127_2905773_19 FeoA domain - - - 0.000000000000000000000000000006658 121.0
CMS1_k127_2905773_2 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 1.26e-259 809.0
CMS1_k127_2905773_20 - - - - 0.0000001812 54.0
CMS1_k127_2905773_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.815e-251 782.0
CMS1_k127_2905773_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.987e-238 740.0
CMS1_k127_2905773_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.264e-196 618.0
CMS1_k127_2905773_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 555.0
CMS1_k127_2905773_7 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 535.0
CMS1_k127_2905773_8 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 468.0
CMS1_k127_2905773_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 341.0
CMS1_k127_2910354_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 2003.0
CMS1_k127_2943929_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0 1205.0
CMS1_k127_2943929_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1038.0
CMS1_k127_2943929_10 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000004803 196.0
CMS1_k127_2943929_11 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000001719 183.0
CMS1_k127_2943929_12 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000008192 141.0
CMS1_k127_2943929_13 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000009907 120.0
CMS1_k127_2943929_14 (Hpt) domain K20976 - - 0.0000000000000000000002137 103.0
CMS1_k127_2943929_2 PFAM ABC transporter K06020 - 3.6.3.25 9.191e-318 979.0
CMS1_k127_2943929_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 4.683e-287 890.0
CMS1_k127_2943929_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006913 550.0
CMS1_k127_2943929_5 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009 541.0
CMS1_k127_2943929_6 PFAM Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 516.0
CMS1_k127_2943929_7 PFAM 4Fe-4S ferredoxin K08358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 433.0
CMS1_k127_2943929_8 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004248 278.0
CMS1_k127_2943929_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004661 258.0
CMS1_k127_2945683_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 550.0
CMS1_k127_2945683_1 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 316.0
CMS1_k127_2945683_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000003992 225.0
CMS1_k127_2945683_3 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000002647 219.0
CMS1_k127_2945683_4 Domain of unknown function (DUF3333) K02038 - - 0.0000000000000000000000000000000000000000000002031 172.0
CMS1_k127_2955173_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 4.991e-288 891.0
CMS1_k127_2955173_1 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 452.0
CMS1_k127_2955173_2 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.0000000000001388 71.0
CMS1_k127_2957294_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 7.966e-213 670.0
CMS1_k127_2957294_1 Flavin containing amine oxidoreductase - - - 2.381e-202 638.0
CMS1_k127_2957294_10 Pfam Pyridoxamine 5'-phosphate - - - 0.00000000000000000000000000000000001441 141.0
CMS1_k127_2957294_11 PFAM response regulator receiver K03413 - - 0.0000000000000000002621 89.0
CMS1_k127_2957294_12 Histidine kinase - - - 0.000000000000000008232 87.0
CMS1_k127_2957294_14 - - - - 0.0000000001249 63.0
CMS1_k127_2957294_2 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 468.0
CMS1_k127_2957294_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000598 467.0
CMS1_k127_2957294_4 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 383.0
CMS1_k127_2957294_5 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 316.0
CMS1_k127_2957294_6 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 323.0
CMS1_k127_2957294_7 Protein of unknown function (DUF3833) - - - 0.000000000000000000000000000000000000000000000000000000000000000769 224.0
CMS1_k127_2957294_8 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000001669 179.0
CMS1_k127_2957294_9 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000001178 173.0
CMS1_k127_2959763_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 572.0
CMS1_k127_2959763_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 425.0
CMS1_k127_2959763_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000006177 196.0
CMS1_k127_298276_0 type II and III secretion system protein K02453 - - 4.577e-227 728.0
CMS1_k127_298276_1 type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001071 256.0
CMS1_k127_298276_2 General secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000001063 216.0
CMS1_k127_298276_3 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000000000000000000000006431 132.0
CMS1_k127_298276_4 Fimbrial assembly family protein K02461 - - 0.000000000000000006077 97.0
CMS1_k127_298276_5 General secretion pathway protein C K02452 - - 0.0000000000281 72.0
CMS1_k127_298276_6 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000004749 69.0
CMS1_k127_298276_7 Prokaryotic N-terminal methylation motif K02459 - - 0.0000002084 61.0
CMS1_k127_298276_8 - - - - 0.000001192 59.0
CMS1_k127_2982904_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 470.0
CMS1_k127_2982904_1 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 445.0
CMS1_k127_2982904_2 SMART Metal-dependent phosphohydrolase, HD region K07141 - 2.7.7.76 0.0000000000000000000000000000000000003739 145.0
CMS1_k127_2982904_3 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000002924 69.0
CMS1_k127_2982904_4 AMP-binding enzyme - - - 0.0004181 48.0
CMS1_k127_2988264_0 CBS domain K00974 - 2.7.7.72 0.0 1081.0
CMS1_k127_2988264_1 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 325.0
CMS1_k127_2988264_2 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 312.0
CMS1_k127_2988264_3 Molydopterin dinucleotide binding domain - - - 0.0000000000000000000000000000000000000000004216 164.0
CMS1_k127_2988264_4 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000001165 104.0
CMS1_k127_2992148_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 387.0
CMS1_k127_2992148_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004976 254.0
CMS1_k127_2992148_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000602 234.0
CMS1_k127_2992148_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000009347 213.0
CMS1_k127_2992148_4 Plasmid stabilization - - - 0.00000000000000000000000000000000000001009 146.0
CMS1_k127_2992148_5 AhpC/TSA antioxidant enzyme - - - 0.000000000000000000000000000000001865 133.0
CMS1_k127_2992148_6 - - - - 0.000000000000000000000074 102.0
CMS1_k127_3012399_0 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 2.342e-264 829.0
CMS1_k127_3012399_1 PFAM DisA bacterial checkpoint controller nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 506.0
CMS1_k127_3012399_10 Glycine zipper 2TM domain - - - 0.000009512 55.0
CMS1_k127_3012399_2 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 475.0
CMS1_k127_3012399_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 473.0
CMS1_k127_3012399_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 465.0
CMS1_k127_3012399_5 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 412.0
CMS1_k127_3012399_6 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000001277 201.0
CMS1_k127_3012399_7 PFAM peptidase K21471 - - 0.000000000000000000000000000000000008244 138.0
CMS1_k127_3012399_8 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000114 117.0
CMS1_k127_301659_0 acyl-CoA dehydrogenase activity K00248 - 1.3.8.1 5.515e-289 894.0
CMS1_k127_301659_1 pentaerythritol trinitrate reductase activity K00219,K01069 - 1.3.1.34,3.1.2.6 9.615e-276 862.0
CMS1_k127_301659_2 pentaerythritol trinitrate reductase activity K00219,K01069 - 1.3.1.34,3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 363.0
CMS1_k127_301659_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000006047 90.0
CMS1_k127_3017395_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1272.0
CMS1_k127_3017395_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 1.33e-276 861.0
CMS1_k127_3017395_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 3.795e-230 724.0
CMS1_k127_3017395_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 581.0
CMS1_k127_3017395_4 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006326 332.0
CMS1_k127_3017395_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 329.0
CMS1_k127_3017395_6 PilZ domain - - - 0.000000000000000000000000000000000000002273 151.0
CMS1_k127_3017395_7 TIGRFAM precorrin-2 C20-methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.00000000000002155 74.0
CMS1_k127_3025057_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1028.0
CMS1_k127_3025057_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.918e-314 970.0
CMS1_k127_3025057_10 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 323.0
CMS1_k127_3025057_11 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002714 282.0
CMS1_k127_3025057_12 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 282.0
CMS1_k127_3025057_13 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000001222 217.0
CMS1_k127_3025057_14 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000002238 177.0
CMS1_k127_3025057_15 regulation of translation K01524,K03530,K04764,K05788 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000003169 124.0
CMS1_k127_3025057_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 3.016e-293 909.0
CMS1_k127_3025057_3 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.409e-280 868.0
CMS1_k127_3025057_4 Pyruvate ferredoxin/flavodoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.79e-279 870.0
CMS1_k127_3025057_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.929e-254 790.0
CMS1_k127_3025057_6 PFAM type II secretion system protein E K02669 - - 2.826e-200 631.0
CMS1_k127_3025057_7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 508.0
CMS1_k127_3025057_8 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 496.0
CMS1_k127_3025057_9 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 427.0
CMS1_k127_303125_0 Efflux pump membrane transporter K18138 - - 0.0 1496.0
CMS1_k127_303125_1 belongs to the CobB CobQ family K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 527.0
CMS1_k127_303125_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 367.0
CMS1_k127_303125_3 MAATS-type transcriptional repressor, C-terminal region K03577 - - 0.000000000000000000000000000000000000000000000004324 179.0
CMS1_k127_303125_4 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000001974 171.0
CMS1_k127_3039910_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239 - 1.3.5.1,1.3.5.4 6.072e-269 837.0
CMS1_k127_3039910_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K05568 - - 2.02e-197 628.0
CMS1_k127_3039910_2 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 478.0
CMS1_k127_3039910_3 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 336.0
CMS1_k127_3039910_4 Domain related to MnhB subunit of Na+/H+ antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000002102 236.0
CMS1_k127_3039910_5 Na H antiporter K05571 - - 0.00000000000000000000000006387 112.0
CMS1_k127_3039910_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.00000000000000000000001042 104.0
CMS1_k127_3039910_7 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.000000000000000009361 87.0
CMS1_k127_3046646_0 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 512.0
CMS1_k127_3046646_1 Bacterial capsule synthesis protein PGA_cap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 449.0
CMS1_k127_3046646_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 400.0
CMS1_k127_3046646_3 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000001261 151.0
CMS1_k127_3047317_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 602.0
CMS1_k127_3047317_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 389.0
CMS1_k127_3047317_2 Predicted metal-binding protein (DUF2284) - - - 0.0000000000000000000000000000000000000000000002909 175.0
CMS1_k127_3047317_3 - - - - 0.00000000000000000000000000000000009814 141.0
CMS1_k127_3055201_0 CHAT domain - - - 0.0 1847.0
CMS1_k127_3055201_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.496e-215 687.0
CMS1_k127_3055201_10 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.0000000000000000000000000000000002802 134.0
CMS1_k127_3055201_11 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000002925 113.0
CMS1_k127_3055201_2 mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 604.0
CMS1_k127_3055201_3 Alanine dehydrogenase PNT, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 555.0
CMS1_k127_3055201_4 amino acid transport K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 544.0
CMS1_k127_3055201_5 PFAM Mammalian cell entry related domain protein K06192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 502.0
CMS1_k127_3055201_6 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 425.0
CMS1_k127_3055201_7 Paraquat-inducible protein A K03808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 302.0
CMS1_k127_3055201_8 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007508 280.0
CMS1_k127_3055201_9 Paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000000000000001917 183.0
CMS1_k127_3060430_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1297.0
CMS1_k127_3060430_1 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.397e-273 849.0
CMS1_k127_3060430_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000001946 196.0
CMS1_k127_3060430_11 - - - - 0.0000000000000000000000000000000001599 138.0
CMS1_k127_3060430_12 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000001221 126.0
CMS1_k127_3060430_2 Participates in initiation and elongation during chromosome replication K02314,K02316,K17680 - 3.6.4.12 1.348e-229 725.0
CMS1_k127_3060430_3 cyclic nucleotide-binding K10914 - - 2.079e-207 685.0
CMS1_k127_3060430_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 5.358e-202 636.0
CMS1_k127_3060430_5 TIGRFAM polyphosphate kinase 2, PA0141 family K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 458.0
CMS1_k127_3060430_6 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 460.0
CMS1_k127_3060430_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008403 401.0
CMS1_k127_3060430_8 3D domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008222 290.0
CMS1_k127_3060430_9 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009798 232.0
CMS1_k127_3061773_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 373.0
CMS1_k127_3061773_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 343.0
CMS1_k127_3061773_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001136 269.0
CMS1_k127_3061773_3 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000006778 177.0
CMS1_k127_3061773_4 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000001483 162.0
CMS1_k127_3061773_5 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000002577 109.0
CMS1_k127_3061773_6 monooxygenase activity - - - 0.000000000000001011 79.0
CMS1_k127_312261_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1196.0
CMS1_k127_312261_1 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010501,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0032268,GO:0032270,GO:0033554,GO:0033592,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034655,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070035,GO:0070417,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000112 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 622.0
CMS1_k127_312261_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 504.0
CMS1_k127_312261_3 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 441.0
CMS1_k127_312261_4 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 380.0
CMS1_k127_312261_5 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 359.0
CMS1_k127_312261_6 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 354.0
CMS1_k127_312261_7 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 288.0
CMS1_k127_312261_8 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007117 272.0
CMS1_k127_3124619_0 Hydrogenase (NiFe) small subunit HydA K05927,K06282,K18008 - 1.12.2.1,1.12.5.1,1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 512.0
CMS1_k127_3124619_1 radical SAM domain protein K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 486.0
CMS1_k127_3124619_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 404.0
CMS1_k127_3124619_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 367.0
CMS1_k127_3124619_4 response regulator K02657,K03413 - - 0.00000000000000000000000000000000000000000000000005368 192.0
CMS1_k127_3124619_5 domain, Protein - - - 0.00000000000000000000000000000000000000001925 164.0
CMS1_k127_3137621_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 2.531e-232 723.0
CMS1_k127_3137621_1 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 380.0
CMS1_k127_3137621_2 TrkA-C domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 314.0
CMS1_k127_3150062_0 Elongation factor SelB winged helix K03833 - - 7.527e-296 920.0
CMS1_k127_3150062_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.727e-235 735.0
CMS1_k127_3150062_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 343.0
CMS1_k127_3150062_11 PFAM aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 333.0
CMS1_k127_3150062_12 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 326.0
CMS1_k127_3150062_13 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 312.0
CMS1_k127_3150062_14 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000001865 226.0
CMS1_k127_3150062_15 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000008797 184.0
CMS1_k127_3150062_16 response regulator, receiver K03413 - - 0.000000002886 62.0
CMS1_k127_3150062_2 acyl-coa dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 584.0
CMS1_k127_3150062_3 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 555.0
CMS1_k127_3150062_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 467.0
CMS1_k127_3150062_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 457.0
CMS1_k127_3150062_6 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 422.0
CMS1_k127_3150062_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 420.0
CMS1_k127_3150062_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 387.0
CMS1_k127_3150062_9 Tellurite resistance protein TerB K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 374.0
CMS1_k127_31521_0 Belongs to the thiolase family K00626 - 2.3.1.9 5.715e-195 616.0
CMS1_k127_31521_1 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 513.0
CMS1_k127_31521_2 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 485.0
CMS1_k127_31521_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 361.0
CMS1_k127_31521_4 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 341.0
CMS1_k127_31521_5 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001759 263.0
CMS1_k127_3185170_0 Glycosyl hydrolase family 65 central catalytic domain K01194 - 3.2.1.28 0.0 1219.0
CMS1_k127_3185170_1 PFAM carboxyl transferase K01615 - 4.1.1.70 0.0 1069.0
CMS1_k127_3185170_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 479.0
CMS1_k127_3185170_11 PFAM Electron transfer flavoprotein alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 436.0
CMS1_k127_3185170_12 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 377.0
CMS1_k127_3185170_13 NAD(P)H-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 311.0
CMS1_k127_3185170_14 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 317.0
CMS1_k127_3185170_15 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005249 275.0
CMS1_k127_3185170_16 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004001 258.0
CMS1_k127_3185170_17 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001865 226.0
CMS1_k127_3185170_18 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000001027 153.0
CMS1_k127_3185170_19 Histidine kinase K00936 - 2.7.13.3 0.0000000000000000000000000000000000000397 164.0
CMS1_k127_3185170_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.428e-293 910.0
CMS1_k127_3185170_20 AMP binding - - - 0.000000000000000000009633 98.0
CMS1_k127_3185170_21 PFAM zinc finger, DksA TraR C4-type K06204 - - 0.0000000000008189 74.0
CMS1_k127_3185170_22 Mo-molybdopterin cofactor metabolic process - - - 0.000006327 51.0
CMS1_k127_3185170_3 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 2.427e-225 701.0
CMS1_k127_3185170_4 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 3.828e-213 668.0
CMS1_k127_3185170_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 4.263e-201 633.0
CMS1_k127_3185170_6 sarcosine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 527.0
CMS1_k127_3185170_7 Cation transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 520.0
CMS1_k127_3185170_8 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 475.0
CMS1_k127_3185170_9 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 473.0
CMS1_k127_3225592_0 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 559.0
CMS1_k127_3225592_1 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 470.0
CMS1_k127_3225592_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 352.0
CMS1_k127_3230234_0 Acts as a magnesium transporter K06213 - - 1.064e-212 668.0
CMS1_k127_3230234_1 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 544.0
CMS1_k127_3230234_10 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000131 208.0
CMS1_k127_3230234_12 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000004266 77.0
CMS1_k127_3230234_13 S4 domain K14761 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000001684 73.0
CMS1_k127_3230234_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 544.0
CMS1_k127_3230234_3 Elongation factor Tu domain 2 K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 518.0
CMS1_k127_3230234_4 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 521.0
CMS1_k127_3230234_5 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 473.0
CMS1_k127_3230234_6 GAF domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 479.0
CMS1_k127_3230234_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 471.0
CMS1_k127_3230234_8 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 415.0
CMS1_k127_3230234_9 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001281 210.0
CMS1_k127_3249660_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004611 284.0
CMS1_k127_3249660_1 PFAM Desulfoferrodoxin ferrous iron-binding region K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000004274 174.0
CMS1_k127_3249660_2 Possible catecholamine-binding domain present in a variety of eukaryotic proteins. - - - 0.00000000000000000000000000000000000000000008194 169.0
CMS1_k127_3249660_3 MarR family transcriptional K15973 - - 0.000000000000000000000000000000000000002518 151.0
CMS1_k127_3249660_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0001863 52.0
CMS1_k127_3298704_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 5.721e-265 822.0
CMS1_k127_3298704_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 3.208e-234 733.0
CMS1_k127_3298704_2 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 601.0
CMS1_k127_3298704_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 379.0
CMS1_k127_3298704_4 LysR substrate binding domain K02521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 372.0
CMS1_k127_3298704_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 351.0
CMS1_k127_3298704_6 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K14696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004158 269.0
CMS1_k127_3298704_7 amino acid - - - 0.00000000000000000000000000000000000000000000000000000005745 212.0
CMS1_k127_3298704_8 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000002817 86.0
CMS1_k127_3298704_9 photosystem II stabilization K02237 - - 0.0000000000000004897 83.0
CMS1_k127_3309442_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 419.0
CMS1_k127_3309442_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002706 282.0
CMS1_k127_3309442_2 BioY family K03523 - - 0.0000000000000000000000000000000000000000000000003368 181.0
CMS1_k127_3321721_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009499 332.0
CMS1_k127_3321721_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000004817 138.0
CMS1_k127_3321721_2 PFAM histidine kinase A domain protein - - - 0.000000000000000000000001464 111.0
CMS1_k127_3342839_0 PFAM ABC transporter related - - - 6.956e-276 856.0
CMS1_k127_3342839_1 DEAD DEAH box helicase K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 599.0
CMS1_k127_3342839_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000004652 226.0
CMS1_k127_3342839_3 PFAM Cold-shock K03704 - - 0.0000000000000000000000000000000005074 130.0
CMS1_k127_3351385_0 pyruvate phosphate dikinase K01007 - 2.7.9.2 1.819e-245 786.0
CMS1_k127_3351385_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000000007193 133.0
CMS1_k127_3351385_2 - - - - 0.00000000000000004905 82.0
CMS1_k127_3371939_0 HD domain - - - 0.0 1176.0
CMS1_k127_3371939_1 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 368.0
CMS1_k127_3371939_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000821 216.0
CMS1_k127_3371939_3 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000001503 218.0
CMS1_k127_3371939_4 Macrolide transporter - - - 0.0000000000000000000000000000000000000000000004718 171.0
CMS1_k127_3371939_5 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000002746 115.0
CMS1_k127_3371939_6 Protein of unknown function (DUF2860) - - - 0.0000000000000000000001166 110.0
CMS1_k127_3391211_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 6.04e-321 990.0
CMS1_k127_3391211_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 506.0
CMS1_k127_3391211_2 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 499.0
CMS1_k127_3391211_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 316.0
CMS1_k127_3391211_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005568 271.0
CMS1_k127_3391211_5 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000004356 192.0
CMS1_k127_3410913_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0 1300.0
CMS1_k127_3410913_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 1.733e-220 694.0
CMS1_k127_3410913_2 Histidine kinase - - - 3.02e-203 647.0
CMS1_k127_3410913_3 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 282.0
CMS1_k127_3410913_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000005707 179.0
CMS1_k127_342542_0 CDP-archaeol synthase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 380.0
CMS1_k127_342542_1 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000001528 170.0
CMS1_k127_342542_2 ACT domain K09964 - - 0.0000000000000000000000000000000000002684 144.0
CMS1_k127_342542_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000000000000000004653 122.0
CMS1_k127_342542_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000006735 97.0
CMS1_k127_3442716_0 PFAM Alpha amylase, catalytic K00690,K05341,K05343 - 2.4.1.4,2.4.1.7,3.2.1.1,5.4.99.16 3e-314 964.0
CMS1_k127_3442716_1 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 3.075e-249 773.0
CMS1_k127_3481405_0 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 289.0
CMS1_k127_3481405_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000297 267.0
CMS1_k127_3481405_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000004605 198.0
CMS1_k127_3481405_3 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.000000000000000000000000000000000000000000000001104 179.0
CMS1_k127_3481405_4 - K20150 - 1.16.9.1 0.000000000000000000007913 105.0
CMS1_k127_3482229_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1269.0
CMS1_k127_3482229_1 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 4.826e-263 823.0
CMS1_k127_3482229_10 ribonuclease Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 610.0
CMS1_k127_3482229_11 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 580.0
CMS1_k127_3482229_12 radical SAM domain protein K03716 - 4.1.99.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 516.0
CMS1_k127_3482229_13 permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 497.0
CMS1_k127_3482229_14 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 496.0
CMS1_k127_3482229_15 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 489.0
CMS1_k127_3482229_16 LysR substrate binding domain K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 488.0
CMS1_k127_3482229_17 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 485.0
CMS1_k127_3482229_18 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 467.0
CMS1_k127_3482229_19 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 407.0
CMS1_k127_3482229_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.629e-258 817.0
CMS1_k127_3482229_20 heat shock protein DnaJ domain protein K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 397.0
CMS1_k127_3482229_21 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 385.0
CMS1_k127_3482229_22 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 380.0
CMS1_k127_3482229_23 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 338.0
CMS1_k127_3482229_24 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 299.0
CMS1_k127_3482229_25 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 306.0
CMS1_k127_3482229_26 Predicted membrane protein (DUF2232) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001276 286.0
CMS1_k127_3482229_27 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005291 275.0
CMS1_k127_3482229_28 AP2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001275 258.0
CMS1_k127_3482229_29 Single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000000000000000000000000000004676 199.0
CMS1_k127_3482229_3 Na H antiporter - - - 2.159e-244 763.0
CMS1_k127_3482229_30 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000000000000000000000000000000000000000000000000002463 198.0
CMS1_k127_3482229_31 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000000000000000004358 182.0
CMS1_k127_3482229_32 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000002004 177.0
CMS1_k127_3482229_33 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000000003456 178.0
CMS1_k127_3482229_34 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000002612 171.0
CMS1_k127_3482229_35 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000004414 156.0
CMS1_k127_3482229_36 TIGRFAM MazG family protein K02499,K04765 - 3.6.1.9 0.00000000000000000000000000000000000001782 149.0
CMS1_k127_3482229_37 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000002125 141.0
CMS1_k127_3482229_38 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000002232 135.0
CMS1_k127_3482229_39 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000000002235 126.0
CMS1_k127_3482229_4 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 3.901e-243 763.0
CMS1_k127_3482229_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.481e-242 754.0
CMS1_k127_3482229_6 AMP-binding enzyme K22319 - 6.1.3.1 3.239e-224 706.0
CMS1_k127_3482229_7 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 2.531e-222 696.0
CMS1_k127_3482229_8 HDOD domain - - - 7.848e-209 661.0
CMS1_k127_3482229_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 2.244e-203 646.0
CMS1_k127_3508811_0 thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 4.195e-316 974.0
CMS1_k127_3508811_1 belongs to the aldehyde dehydrogenase family K04072,K15515 - 1.1.1.1,1.2.1.10,1.2.1.81 4.087e-209 659.0
CMS1_k127_3508811_2 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 290.0
CMS1_k127_3508811_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001115 260.0
CMS1_k127_3508811_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000995 224.0
CMS1_k127_3508811_5 Glucose dehydrogenase C-terminus K00008,K00060 - 1.1.1.103,1.1.1.14 0.00001427 48.0
CMS1_k127_356675_0 PFAM Peptidase M20 K01439 - 3.5.1.18 1.927e-197 625.0
CMS1_k127_356675_1 PFAM phosphoesterase RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 351.0
CMS1_k127_356675_2 (Rhomboid) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 332.0
CMS1_k127_356675_3 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000006013 154.0
CMS1_k127_356675_4 Thioesterase superfamily - - - 0.0000000000000000000000000000000002381 138.0
CMS1_k127_3585989_0 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 5.358e-207 651.0
CMS1_k127_3585989_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 578.0
CMS1_k127_3585989_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 414.0
CMS1_k127_3585989_3 PFAM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 383.0
CMS1_k127_360221_0 Chloride channel K03281 - - 3.73e-261 816.0
CMS1_k127_360221_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 7.949e-199 630.0
CMS1_k127_360221_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 294.0
CMS1_k127_360221_3 HNH endonuclease K07454 - - 0.000000000000000000000000000000000000000000000000000000000000000000009365 246.0
CMS1_k127_360221_4 Protein of unknown function (DUF2786) - - - 0.00000000000000000000000000000000000000000000000000000000000005476 229.0
CMS1_k127_360221_5 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.0000000000000003158 95.0
CMS1_k127_360221_6 regulator of chromosome condensation, RCC1 - - - 0.00000001347 70.0
CMS1_k127_360221_7 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.0001315 44.0
CMS1_k127_3604348_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 533.0
CMS1_k127_3604348_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 465.0
CMS1_k127_3604348_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000003203 149.0
CMS1_k127_3604348_3 Major facilitator Superfamily K08177,K18326 - - 0.00002533 48.0
CMS1_k127_3604348_4 Solute carrier family 16 (monocarboxylic acid transporters), member 12b K08189,K11810 GO:0003333,GO:0003674,GO:0005215,GO:0005308,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006865,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015238,GO:0015318,GO:0015711,GO:0015718,GO:0015849,GO:0015881,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0072349,GO:0098656,GO:1903825,GO:1905039 - 0.00003175 51.0
CMS1_k127_3615895_0 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007532 278.0
CMS1_k127_3615895_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000004366 246.0
CMS1_k127_3615895_2 Domain of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002805 244.0
CMS1_k127_3615895_3 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000003187 215.0
CMS1_k127_3615895_4 4Fe-4S single cluster domain K05337 - - 0.000000000000000000000005364 104.0
CMS1_k127_3615895_5 Pentapeptide repeats (8 copies) - - - 0.000000000000000000000235 110.0
CMS1_k127_361797_0 PFAM inner-membrane translocator K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 574.0
CMS1_k127_361797_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 531.0
CMS1_k127_361797_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 491.0
CMS1_k127_361797_3 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 430.0
CMS1_k127_3637732_0 of the drug metabolite transporter (DMT) superfamily K15268 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 413.0
CMS1_k127_3637732_1 PFAM ABC 3 transport family K09816,K09819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 402.0
CMS1_k127_3637732_2 PFAM periplasmic solute binding protein K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 353.0
CMS1_k127_3637732_3 PFAM ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 352.0
CMS1_k127_3637732_4 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 322.0
CMS1_k127_3637732_5 Phosphonate ABC transporter, periplasmic K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000001986 254.0
CMS1_k127_3637732_6 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000003727 224.0
CMS1_k127_3637732_7 Ferric uptake regulator family K03711 - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
CMS1_k127_3637732_8 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000001935 179.0
CMS1_k127_3638364_0 PFAM Glycoside hydrolase 15-related - - - 4.732e-301 941.0
CMS1_k127_3638364_1 Cache_2 - - - 1.052e-264 827.0
CMS1_k127_3638364_2 L,D-transpeptidase catalytic domain K21470 - - 5.458e-221 698.0
CMS1_k127_3638364_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 450.0
CMS1_k127_3638364_4 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006355 249.0
CMS1_k127_3652222_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 5.816e-241 754.0
CMS1_k127_3652222_1 PFAM Binding-protein-dependent transport system inner membrane component K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 554.0
CMS1_k127_3652222_10 PFAM toluene tolerance K07323 - - 0.000000000000000000000000000000000000000000000000001649 191.0
CMS1_k127_3652222_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000001414 176.0
CMS1_k127_3652222_12 - - - - 0.000000000000000000000000000000000000000000005833 169.0
CMS1_k127_3652222_13 decarboxylase, gamma subunit - - - 0.00000000000000006648 85.0
CMS1_k127_3652222_2 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 540.0
CMS1_k127_3652222_3 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 486.0
CMS1_k127_3652222_4 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 465.0
CMS1_k127_3652222_5 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 427.0
CMS1_k127_3652222_6 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 391.0
CMS1_k127_3652222_7 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 369.0
CMS1_k127_3652222_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 320.0
CMS1_k127_3652222_9 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001289 263.0
CMS1_k127_36533_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008197 368.0
CMS1_k127_36533_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000471 238.0
CMS1_k127_36533_3 - - - - 0.000000000000000000000004092 111.0
CMS1_k127_3653593_0 AAA domain - - - 1.728e-253 802.0
CMS1_k127_3653593_1 Calcineurin-like phosphoesterase K03547 - - 3.402e-196 619.0
CMS1_k127_3653593_2 Mechanosensitive ion channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005614 279.0
CMS1_k127_365741_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1122.0
CMS1_k127_365741_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.355e-314 977.0
CMS1_k127_365741_10 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 448.0
CMS1_k127_365741_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 456.0
CMS1_k127_365741_12 CHAD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 399.0
CMS1_k127_365741_13 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 356.0
CMS1_k127_365741_14 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 337.0
CMS1_k127_365741_15 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 320.0
CMS1_k127_365741_16 TIGRFAM methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 310.0
CMS1_k127_365741_17 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001704 265.0
CMS1_k127_365741_18 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003681 257.0
CMS1_k127_365741_19 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000001503 229.0
CMS1_k127_365741_2 PFAM ABC transporter K06158 - - 1.46e-276 865.0
CMS1_k127_365741_20 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002833 200.0
CMS1_k127_365741_21 TIGRFAM cysteine synthase A K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000004078 163.0
CMS1_k127_365741_3 PFAM Cys Met metabolism K01740 - 2.5.1.49 8.528e-217 679.0
CMS1_k127_365741_4 Receptor family ligand binding region K01999 - - 6.769e-202 633.0
CMS1_k127_365741_5 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 574.0
CMS1_k127_365741_6 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 549.0
CMS1_k127_365741_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 493.0
CMS1_k127_365741_8 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 486.0
CMS1_k127_365741_9 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 463.0
CMS1_k127_3684948_0 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 481.0
CMS1_k127_3684948_1 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 479.0
CMS1_k127_3684948_10 cell wall organization - - - 0.0000000000004509 76.0
CMS1_k127_3684948_11 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000003476 48.0
CMS1_k127_3684948_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 438.0
CMS1_k127_3684948_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 400.0
CMS1_k127_3684948_4 Bacterial periplasmic substrate-binding proteins K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 379.0
CMS1_k127_3684948_5 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 287.0
CMS1_k127_3684948_6 - - - - 0.0000000000000000000000000000000000000000000000001036 184.0
CMS1_k127_3684948_7 ThiF family K03148 - 2.7.7.73 0.000000000000000000000000000000000000000000000008761 177.0
CMS1_k127_3684948_8 - - - - 0.0000000000000000000000000000000000000000000001105 170.0
CMS1_k127_3684948_9 glycolate biosynthetic process K01091,K06019,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18,3.6.1.1 0.000000000000000000000000000000000001045 149.0
CMS1_k127_3686939_0 YXWGXW repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 351.0
CMS1_k127_3686939_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 317.0
CMS1_k127_3686939_2 PFAM ApbE family K09740 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 299.0
CMS1_k127_3686939_3 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 294.0
CMS1_k127_3686939_4 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000004136 209.0
CMS1_k127_3686939_5 toxin biosynthetic process K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.00000000000000000000000000000000000000000000000000001317 195.0
CMS1_k127_3686939_6 - - - - 0.00000000000000000000000000000000002158 138.0
CMS1_k127_3687894_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.72e-294 918.0
CMS1_k127_3687894_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 572.0
CMS1_k127_3687894_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004349 264.0
CMS1_k127_3687894_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003538 186.0
CMS1_k127_3687894_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000001334 149.0
CMS1_k127_3687894_5 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000003444 105.0
CMS1_k127_3697470_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 3.891e-311 974.0
CMS1_k127_3697470_1 TIGRFAM ammonium transporter K03320 - - 7.921e-214 669.0
CMS1_k127_3697470_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 601.0
CMS1_k127_3697470_3 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 574.0
CMS1_k127_3697470_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 527.0
CMS1_k127_3697470_5 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000005433 194.0
CMS1_k127_3705988_0 Sulfatase K01130 - 3.1.6.1 0.0 1368.0
CMS1_k127_3705988_1 Iron-sulfur cluster-binding domain K06871 - - 6.255e-203 638.0
CMS1_k127_3705988_2 Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000003456 226.0
CMS1_k127_3705988_3 Protein of unknown function (DUF3313) - - - 0.00000000000000000000000000000000000000000000000000000005586 203.0
CMS1_k127_3705988_4 Cysteine rich repeat - - - 0.00000000000000000000000000000000000000000000000006864 181.0
CMS1_k127_3716802_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 344.0
CMS1_k127_3716802_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000001425 216.0
CMS1_k127_3716802_2 Immunoglobulin-like domain of bacterial spore germination - - - 0.0000000000000000000000000000000000000007367 154.0
CMS1_k127_3716802_3 response to heat K03668,K06079,K09914 - - 0.0000000000000000000000000000000002083 136.0
CMS1_k127_3745237_0 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 576.0
CMS1_k127_3745237_1 Periplasmic binding protein domain K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 541.0
CMS1_k127_3745237_2 Belongs to the binding-protein-dependent transport system permease family K02057,K10440,K10538 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 511.0
CMS1_k127_3745237_3 ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 389.0
CMS1_k127_3745237_4 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 308.0
CMS1_k127_3745237_5 ABC transporter K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 292.0
CMS1_k127_3745237_6 - - - - 0.0000000000003643 71.0
CMS1_k127_3778989_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 9.57e-205 642.0
CMS1_k127_3778989_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 595.0
CMS1_k127_3778989_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 582.0
CMS1_k127_3778989_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 372.0
CMS1_k127_3778989_4 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003671 253.0
CMS1_k127_3778989_5 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000001757 239.0
CMS1_k127_3778989_6 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000000499 129.0
CMS1_k127_3778989_7 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000008822 97.0
CMS1_k127_3787747_0 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 309.0
CMS1_k127_3787747_1 CorA-like Mg2+ transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004674 247.0
CMS1_k127_3787747_2 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001066 237.0
CMS1_k127_3787747_3 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000000000000000003114 163.0
CMS1_k127_3787747_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000002024 141.0
CMS1_k127_3787747_5 Lipopolysaccharide-assembly, LptC-related - - - 0.00000004586 59.0
CMS1_k127_379325_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.281e-245 765.0
CMS1_k127_379325_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 330.0
CMS1_k127_379325_2 Putative exonuclease, RdgC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 309.0
CMS1_k127_379325_3 May be involved in recombination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004819 270.0
CMS1_k127_3798712_0 PFAM response regulator receiver K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001026 264.0
CMS1_k127_3798712_1 Histidine kinase - - - 0.00000000000000000000000000000673 124.0
CMS1_k127_3798712_2 Response regulator, receiver K21025 - - 0.00000000000000000001469 96.0
CMS1_k127_3798712_3 PFAM response regulator receiver - - - 0.0000000006076 68.0
CMS1_k127_3817359_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 534.0
CMS1_k127_3817359_1 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 357.0
CMS1_k127_3817359_2 protein complex oligomerization - - - 0.00000000000000000000000000000000000002829 152.0
CMS1_k127_3817359_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000006247 66.0
CMS1_k127_3846649_0 membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 528.0
CMS1_k127_3846649_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 494.0
CMS1_k127_3846649_2 lipolytic protein G-D-S-L family - GO:0000272,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010391,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0017144,GO:0042737,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0045491,GO:0045493,GO:0046555,GO:0052689,GO:0071554,GO:0071704,GO:1901575,GO:2000884 - 0.000006201 51.0
CMS1_k127_3871810_0 FtsX-like permease family - - - 0.0 1695.0
CMS1_k127_3871810_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 348.0
CMS1_k127_3896057_0 ATP-grasp domain - - - 0.0 1107.0
CMS1_k127_3896057_1 CoA-binding domain protein K01905,K22224 - 6.2.1.13 9.282e-234 746.0
CMS1_k127_3896057_2 PFAM aminotransferase class I and II K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 540.0
CMS1_k127_3896057_3 B3/4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001206 262.0
CMS1_k127_3896057_4 N-acetyltransferase K00675 - 2.3.1.118 0.00000000000000000000000000000000002068 139.0
CMS1_k127_3896057_5 molybdopterin cofactor binding - - - 0.0000000000000000000000000000000367 127.0
CMS1_k127_3896057_6 Alkyl sulfatase dimerisation - - - 0.00000000000006612 76.0
CMS1_k127_3905579_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 400.0
CMS1_k127_3905579_1 hydrolase family 65, central catalytic K00691,K01838,K04844,K05342 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944 2.4.1.64,2.4.1.8,5.4.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 400.0
CMS1_k127_3905579_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000001662 178.0
CMS1_k127_3919449_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 1.093e-320 1004.0
CMS1_k127_3919449_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.36e-199 631.0
CMS1_k127_3919449_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 4.267e-197 617.0
CMS1_k127_3919449_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 432.0
CMS1_k127_3919449_4 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009026 248.0
CMS1_k127_3919449_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000001046 237.0
CMS1_k127_3919449_6 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000166 161.0
CMS1_k127_3927384_0 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 597.0
CMS1_k127_3927384_1 polymerase with PALM domain, HD hydrolase domain and Zn ribbon K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 479.0
CMS1_k127_3927384_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 434.0
CMS1_k127_3927384_3 cyclic nucleotide-binding K01420,K21563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 297.0
CMS1_k127_3927384_4 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000003017 208.0
CMS1_k127_3971653_0 Phosphate acyltransferases K03928 - 3.1.1.1 2.515e-220 704.0
CMS1_k127_3971653_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 5.285e-195 625.0
CMS1_k127_3971653_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002666 260.0
CMS1_k127_3971653_3 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.000000000000000000006799 94.0
CMS1_k127_3984722_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.464e-265 831.0
CMS1_k127_3984722_1 Trimethylamine methyltransferase (MTTB) - - - 1.044e-207 655.0
CMS1_k127_3984722_10 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 286.0
CMS1_k127_3984722_11 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000007544 184.0
CMS1_k127_3984722_12 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000002503 167.0
CMS1_k127_3984722_13 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000005508 156.0
CMS1_k127_3984722_14 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000001995 152.0
CMS1_k127_3984722_15 Universal stress protein - - - 0.000000000000000000000000000000000002701 143.0
CMS1_k127_3984722_16 EamA-like transporter family - - - 0.00000000001528 68.0
CMS1_k127_3984722_17 Proline dehydrogenase K00318 - - 0.000003682 48.0
CMS1_k127_3984722_2 Sodium:sulfate symporter transmembrane region K14445 - - 4.953e-202 635.0
CMS1_k127_3984722_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 1.426e-199 626.0
CMS1_k127_3984722_4 AsmA-like C-terminal region K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 545.0
CMS1_k127_3984722_5 Bacterial regulatory protein, Fis family K06714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 468.0
CMS1_k127_3984722_6 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 456.0
CMS1_k127_3984722_7 PFAM dihydropteroate synthase DHPS K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 443.0
CMS1_k127_3984722_8 DNA ligase OB-like domain K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 377.0
CMS1_k127_3984722_9 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 299.0
CMS1_k127_3990684_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 398.0
CMS1_k127_3990684_1 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006187 285.0
CMS1_k127_3990684_2 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000001662 217.0
CMS1_k127_3993274_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 7.449e-320 988.0
CMS1_k127_3993274_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 1.786e-316 975.0
CMS1_k127_3993274_10 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000009204 191.0
CMS1_k127_3993274_11 ATP synthesis coupled electron transport K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000008733 119.0
CMS1_k127_3993274_2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 1.096e-238 743.0
CMS1_k127_3993274_3 molybdopterin oxidoreductase Fe4S4 region K00336 - 1.6.5.3 8.033e-228 717.0
CMS1_k127_3993274_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.488e-217 683.0
CMS1_k127_3993274_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 456.0
CMS1_k127_3993274_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 326.0
CMS1_k127_3993274_7 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 305.0
CMS1_k127_3993274_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 286.0
CMS1_k127_3993274_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000007335 234.0
CMS1_k127_3998960_0 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 5.692e-207 655.0
CMS1_k127_3998960_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 477.0
CMS1_k127_3998960_2 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 252.0
CMS1_k127_3998960_3 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000007231 252.0
CMS1_k127_3998960_4 methyltransferase activity - - - 0.00000000000000000000000000000000061 138.0
CMS1_k127_3998960_5 Universal stress protein family - - - 0.00000000000000000000000000008811 122.0
CMS1_k127_4005578_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 3.71e-288 917.0
CMS1_k127_4005578_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 583.0
CMS1_k127_4005578_2 radical SAM K04034 - 1.21.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 588.0
CMS1_k127_4005578_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 514.0
CMS1_k127_4005578_4 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000423 289.0
CMS1_k127_4005578_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 288.0
CMS1_k127_4005578_6 TIGRFAM maf protein K06287 - - 0.00000000000000000000000000000000000000000000000000000005755 201.0
CMS1_k127_4029559_0 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 1.276e-302 938.0
CMS1_k127_4029559_1 Bacterial extracellular solute-binding proteins, family 5 Middle K13889 - - 9.943e-276 853.0
CMS1_k127_4029559_2 PFAM CoA-binding domain protein - - - 3.701e-225 711.0
CMS1_k127_4029559_3 Binding-protein-dependent transport system inner membrane component K02033,K12369,K13890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 519.0
CMS1_k127_4029559_4 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007926 512.0
CMS1_k127_4029559_5 PFAM binding-protein-dependent transport systems inner membrane component K13891 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 447.0
CMS1_k127_4029559_6 Glutamine amidotransferase domain K00764 - 2.4.2.14 0.0001078 46.0
CMS1_k127_4030122_0 Domain of unknown function (DUF3394) - - - 5.096e-283 879.0
CMS1_k127_4030122_1 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000004863 197.0
CMS1_k127_4030122_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000001313 57.0
CMS1_k127_4032899_0 Threonyl and Alanyl tRNA synthetase second additional domain K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 569.0
CMS1_k127_4032899_1 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 524.0
CMS1_k127_4056155_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.705e-307 950.0
CMS1_k127_4056155_1 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 3.901e-288 901.0
CMS1_k127_4056155_10 Lytic murein transglycosylase K00786,K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 436.0
CMS1_k127_4056155_11 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 300.0
CMS1_k127_4056155_12 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 284.0
CMS1_k127_4056155_13 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002441 273.0
CMS1_k127_4056155_14 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000005072 263.0
CMS1_k127_4056155_15 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005613 235.0
CMS1_k127_4056155_16 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000004541 222.0
CMS1_k127_4056155_17 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001156 209.0
CMS1_k127_4056155_18 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000005298 200.0
CMS1_k127_4056155_19 AMMECR1 K06990 - - 0.0000000000000000000000000000000000000000000000000000005392 198.0
CMS1_k127_4056155_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.947e-227 714.0
CMS1_k127_4056155_20 PFAM DsrE DsrF-like family - - - 0.000000000000000000000000000000000000000000001944 166.0
CMS1_k127_4056155_21 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000669 161.0
CMS1_k127_4056155_22 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000000001869 151.0
CMS1_k127_4056155_24 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.00000000000000000000000000000000000657 144.0
CMS1_k127_4056155_25 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000001178 123.0
CMS1_k127_4056155_3 Sulphur transport K07112 - - 2.214e-198 625.0
CMS1_k127_4056155_4 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 541.0
CMS1_k127_4056155_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 533.0
CMS1_k127_4056155_6 Protein of unknown function (DUF933) K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 524.0
CMS1_k127_4056155_7 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 499.0
CMS1_k127_4056155_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 448.0
CMS1_k127_4056155_9 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 443.0
CMS1_k127_4076868_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.221e-303 937.0
CMS1_k127_4076868_1 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 415.0
CMS1_k127_4076868_2 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 329.0
CMS1_k127_4076868_3 PFAM peptidase K21471 - - 0.000000000000000000000000000000000000000000000000000000000001688 223.0
CMS1_k127_4099976_0 PFAM Acetyl-CoA hydrolase transferase - - - 1.997e-273 854.0
CMS1_k127_4099976_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 300.0
CMS1_k127_4099976_2 PFAM peptidase M48 Ste24p K07387 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002466 265.0
CMS1_k127_4099976_3 - - - - 0.00000000000001603 76.0
CMS1_k127_4103700_0 Belongs to the TelA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 436.0
CMS1_k127_4103700_1 PFAM 5-bromo-4-chloroindolyl phosphate hydrolysis protein - - - 0.0000000000000000000000000000000000000000000000000000000000004489 223.0
CMS1_k127_4103700_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000002653 168.0
CMS1_k127_4103700_3 AhpC/TSA antioxidant enzyme - - - 0.000000000000000000000000000000001036 134.0
CMS1_k127_4135945_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05559,K14086 - - 0.0 1200.0
CMS1_k127_4135945_1 - - - - 0.0 1028.0
CMS1_k127_4135945_10 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05563 - - 0.00000000000000000000000005572 109.0
CMS1_k127_4135945_2 COG0790 FOG TPR repeat, SEL1 subfamily - - - 7.253e-284 885.0
CMS1_k127_4135945_3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K05342 - 2.4.1.64 6.489e-208 659.0
CMS1_k127_4135945_4 PFAM NADH Ubiquinone plastoquinone (complex I) K05561,K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 552.0
CMS1_k127_4135945_5 phosphonoacetaldehyde hydrolase activity K01087,K01194,K01838,K05342 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009058,GO:0009292,GO:0009294,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016853,GO:0016866,GO:0016868,GO:0019203,GO:0030312,GO:0033554,GO:0034637,GO:0040007,GO:0042221,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046351,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704,GO:0071944,GO:1901576 2.4.1.64,3.1.3.12,3.2.1.28,5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006903 277.0
CMS1_k127_4135945_6 antiporter K05562,K05569 - - 0.000000000000000000000000000000000000000000000000000000000000000001098 234.0
CMS1_k127_4135945_7 PFAM Restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000001642 204.0
CMS1_k127_4135945_8 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05560,K05567 - - 0.000000000000000000000000000000000000000000003536 166.0
CMS1_k127_4135945_9 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05564,K05571 - - 0.000000000000000000000000000001262 130.0
CMS1_k127_4164253_0 FAD dependent oxidoreductase K07137 - - 1.454e-244 762.0
CMS1_k127_4164253_1 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 570.0
CMS1_k127_4164253_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 552.0
CMS1_k127_4164253_3 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 419.0
CMS1_k127_4164253_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 396.0
CMS1_k127_4164253_5 C-terminal domain of 1-Cys peroxiredoxin K03386,K20011 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 316.0
CMS1_k127_4164253_6 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000001925 128.0
CMS1_k127_4164253_7 Rubredoxin - - - 0.000000000000000000000006879 100.0
CMS1_k127_4164253_8 PFAM peptidase K08303 - - 0.000000000000000001782 88.0
CMS1_k127_4164253_9 Belongs to the ArsC family - - - 0.0000000000000000387 84.0
CMS1_k127_4195668_0 CheR methyltransferase, all-alpha domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 493.0
CMS1_k127_4195668_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006169 271.0
CMS1_k127_4195668_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000004348 158.0
CMS1_k127_4195668_3 PFAM Cold-shock K03704 - - 0.00000000000000000000000009493 107.0
CMS1_k127_4195668_4 PFAM GGDEF domain - - - 0.0000000000000000000617 103.0
CMS1_k127_4195668_5 translation release factor activity - - - 0.0000000000357 66.0
CMS1_k127_4195668_6 response regulator, receiver - - - 0.000009761 55.0
CMS1_k127_4214197_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 6.773e-212 665.0
CMS1_k127_4214197_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 471.0
CMS1_k127_4228132_0 Heat shock 70 kDa protein K04043 - - 0.0 1060.0
CMS1_k127_4228132_1 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 549.0
CMS1_k127_4228132_2 response regulator receiver K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 550.0
CMS1_k127_4228132_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 406.0
CMS1_k127_4228132_4 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.000000000000000000000000000000000000000000000000000000000003564 213.0
CMS1_k127_4228132_5 Asparaginase, N-terminal K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000003324 214.0
CMS1_k127_4228132_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000003189 203.0
CMS1_k127_4232712_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 0.0 1457.0
CMS1_k127_4232712_1 Seven times multi-haem cytochrome CxxCH - - - 2.779e-288 893.0
CMS1_k127_4232712_10 TIGRFAM MauM NapG family ferredoxin-type protein K02573 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 317.0
CMS1_k127_4232712_11 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 321.0
CMS1_k127_4232712_12 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 314.0
CMS1_k127_4232712_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002147 251.0
CMS1_k127_4232712_14 heat shock protein binding - - - 0.0000000000000000000000000000000000367 138.0
CMS1_k127_4232712_16 negative regulation of establishment of protein localization K02570 GO:0003674,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0032879,GO:0032880,GO:0033218,GO:0042277,GO:0044424,GO:0044464,GO:0048519,GO:0050789,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0065007,GO:0070201,GO:0090087,GO:1904950 - 0.00000000000000000000000000558 112.0
CMS1_k127_4232712_17 - - - - 0.00000000000000000000000206 114.0
CMS1_k127_4232712_2 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 599.0
CMS1_k127_4232712_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 596.0
CMS1_k127_4232712_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 578.0
CMS1_k127_4232712_5 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 467.0
CMS1_k127_4232712_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 433.0
CMS1_k127_4232712_7 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 422.0
CMS1_k127_4232712_8 PFAM sigma-54 factor interaction domain-containing protein K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 392.0
CMS1_k127_4232712_9 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 381.0
CMS1_k127_4242114_0 Conserved carboxylase domain K01960 - 6.4.1.1 0.0 1004.0
CMS1_k127_4242114_1 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 1.722e-208 660.0
CMS1_k127_4242114_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000005897 167.0
CMS1_k127_4260666_0 PFAM TrkA-N domain - - - 1.719e-215 683.0
CMS1_k127_4260666_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
CMS1_k127_4260666_2 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000000000000000000000000000001772 216.0
CMS1_k127_4260666_3 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000125 211.0
CMS1_k127_4260666_4 Belongs to the GcvT family K00605 - 2.1.2.10 0.00000000000000000000000000006643 118.0
CMS1_k127_4260666_5 aldo keto reductase - - - 0.0000000000000000000000004971 105.0
CMS1_k127_4261_0 Belongs to the ABC transporter superfamily K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004254 273.0
CMS1_k127_4261_1 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000009132 224.0
CMS1_k127_4261_2 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000000000000000000000001026 171.0
CMS1_k127_4261_3 protein trimerization K01448 - 3.5.1.28 0.0000000000000000724 81.0
CMS1_k127_4261_4 Protein of unknown function DUF72 - - - 0.000000003015 58.0
CMS1_k127_4261_5 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.00000006482 59.0
CMS1_k127_4261_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00001308 52.0
CMS1_k127_4278847_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042,K18121 - 1.1.1.31,1.1.1.60,1.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 426.0
CMS1_k127_4278847_1 - - - - 0.000000000000000000000000000000000007972 139.0
CMS1_k127_4278847_3 Chemotaxis sensory transducer K03406,K13487 - - 0.00000000000000000000007456 97.0
CMS1_k127_4278847_4 Methyltransferase domain - - - 0.00000000000000003882 83.0
CMS1_k127_4278847_5 META domain K03668 - - 0.0000000052 65.0
CMS1_k127_4317373_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 490.0
CMS1_k127_4317373_1 Sodium Bile acid symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005247 248.0
CMS1_k127_4317373_2 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000003195 231.0
CMS1_k127_4317373_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000004897 154.0
CMS1_k127_4317373_4 Rhodanese-like domain - - - 0.000000000000000000000000000007774 119.0
CMS1_k127_4317373_5 Sodium Bile acid symporter family - - - 0.00000001334 62.0
CMS1_k127_4353568_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 2.084e-226 715.0
CMS1_k127_4353568_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 579.0
CMS1_k127_4353568_2 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 541.0
CMS1_k127_4353568_3 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 448.0
CMS1_k127_4353568_4 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 438.0
CMS1_k127_4353568_5 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 409.0
CMS1_k127_4353568_6 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000216 228.0
CMS1_k127_4353568_7 Universal stress protein - - - 0.000000000000000000000000000000000000001628 154.0
CMS1_k127_4353568_8 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000003705 143.0
CMS1_k127_4376783_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1471.0
CMS1_k127_4376783_1 PFAM ATP-binding region ATPase domain protein - - - 0.0 1072.0
CMS1_k127_4376783_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 5.771e-299 930.0
CMS1_k127_4376783_3 N-terminal domain of oxidoreductase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 540.0
CMS1_k127_4376783_4 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 499.0
CMS1_k127_4376783_5 Major Facilitator Superfamily K02445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 439.0
CMS1_k127_4410497_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 380.0
CMS1_k127_4410497_1 PFAM YkuD domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 338.0
CMS1_k127_4410497_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000007127 185.0
CMS1_k127_4410497_3 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000002106 176.0
CMS1_k127_44123_0 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 4.73e-197 643.0
CMS1_k127_44123_1 PFAM Dual specificity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 354.0
CMS1_k127_44123_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 300.0
CMS1_k127_44123_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.0000000000000000000000000000000001054 134.0
CMS1_k127_4447283_0 NAD-specific glutamate dehydrogenase GdhA K15371 - 1.4.1.2 0.0 1238.0
CMS1_k127_4447283_1 membrane carboxypeptidase (Penicillin-binding protein) - - - 0.0 1056.0
CMS1_k127_4447283_10 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 538.0
CMS1_k127_4447283_11 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 511.0
CMS1_k127_4447283_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 386.0
CMS1_k127_4447283_13 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 345.0
CMS1_k127_4447283_14 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001164 250.0
CMS1_k127_4447283_15 HI0933-like protein K00322 - 1.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000002227 237.0
CMS1_k127_4447283_16 Nicotinamidase K08281 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.1.19 0.000000000000000000000000000000000000000000000000000001083 198.0
CMS1_k127_4447283_17 Type II secretory pathway, component ExeA (ATPase) K01714,K02450,K12283 - 4.3.3.7 0.0000000000000000000000000002931 117.0
CMS1_k127_4447283_2 PFAM ferredoxin - - - 4.34e-314 973.0
CMS1_k127_4447283_3 Voltage gated chloride channel K03281 - - 4.341e-312 968.0
CMS1_k127_4447283_4 Cache 3/Cache 2 fusion domain - - - 3.915e-277 869.0
CMS1_k127_4447283_5 Receptor family ligand binding region K01999 - - 6.34e-224 699.0
CMS1_k127_4447283_6 Bacterial regulatory protein, Fis family - - - 2.588e-200 633.0
CMS1_k127_4447283_7 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 592.0
CMS1_k127_4447283_8 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 555.0
CMS1_k127_4447283_9 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 549.0
CMS1_k127_4460690_0 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.0 1035.0
CMS1_k127_4460690_1 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00002085 49.0
CMS1_k127_4467311_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 516.0
CMS1_k127_4467311_1 PFAM 2-nitropropane dioxygenase NPD K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 466.0
CMS1_k127_4467311_2 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 387.0
CMS1_k127_4472705_0 sigma54 specific, transcriptional regulator, Fis family K21405 - - 2.491e-234 741.0
CMS1_k127_4472705_1 Prolipoprotein diacylglyceryl transferase - - - 0.000000000000008112 78.0
CMS1_k127_4493014_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 5.234e-242 752.0
CMS1_k127_4493014_1 Bacterial extracellular solute-binding protein, family 7 - - - 1.45e-235 730.0
CMS1_k127_4493014_10 Phosphate acyltransferases K03928 - 3.1.1.1 0.00000000000000000000000000000001488 128.0
CMS1_k127_4493014_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.838e-208 656.0
CMS1_k127_4493014_3 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 576.0
CMS1_k127_4493014_4 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 564.0
CMS1_k127_4493014_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 512.0
CMS1_k127_4493014_6 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 403.0
CMS1_k127_4493014_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008862 258.0
CMS1_k127_4493014_8 FCD K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 257.0
CMS1_k127_4493014_9 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000348 202.0
CMS1_k127_4507691_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1134.0
CMS1_k127_4507691_1 PFAM AMP-dependent synthetase and ligase K00666 - - 4.751e-257 801.0
CMS1_k127_4507691_10 PFAM Sulphate transporter K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009409 286.0
CMS1_k127_4507691_11 Carbon-nitrogen hydrolase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002559 268.0
CMS1_k127_4507691_12 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000009067 239.0
CMS1_k127_4507691_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000002469 231.0
CMS1_k127_4507691_14 Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000008326 203.0
CMS1_k127_4507691_15 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000002267 204.0
CMS1_k127_4507691_16 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000000001181 184.0
CMS1_k127_4507691_17 - - - - 0.000000000000000000000000000000000000000003835 156.0
CMS1_k127_4507691_18 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.0000000000000000000000000000000000000002499 158.0
CMS1_k127_4507691_2 DNA polymerase X family K02347 - - 3.918e-220 698.0
CMS1_k127_4507691_20 belongs to the carbohydrate kinase PfkB family K00882 - 2.7.1.56 0.000000000000000001844 89.0
CMS1_k127_4507691_3 Pirin K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 541.0
CMS1_k127_4507691_4 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 539.0
CMS1_k127_4507691_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 493.0
CMS1_k127_4507691_6 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 422.0
CMS1_k127_4507691_7 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 415.0
CMS1_k127_4507691_8 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 300.0
CMS1_k127_4507691_9 overlaps another CDS with the same product name K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004266 276.0
CMS1_k127_4512861_0 Histidine kinase-like ATPases - - - 1.946e-197 656.0
CMS1_k127_4512861_1 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 428.0
CMS1_k127_4524143_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 502.0
CMS1_k127_4524143_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 452.0
CMS1_k127_4524143_2 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001054 230.0
CMS1_k127_4524143_3 cheY-homologous receiver domain K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000002187 165.0
CMS1_k127_4524143_4 PFAM nuclease (SNase - - - 0.000000000000000000000000000000001509 136.0
CMS1_k127_4527041_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 7.741e-287 888.0
CMS1_k127_4527041_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 486.0
CMS1_k127_4527041_2 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000001258 187.0
CMS1_k127_4527041_3 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000002907 145.0
CMS1_k127_4527041_4 - - - - 0.000000000003871 68.0
CMS1_k127_4527041_5 - - - - 0.0000000004015 66.0
CMS1_k127_453303_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1469.0
CMS1_k127_453303_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 390.0
CMS1_k127_453303_2 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 290.0
CMS1_k127_453303_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 295.0
CMS1_k127_453303_4 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000039 160.0
CMS1_k127_453303_5 DNA-binding transcription factor activity - - - 0.000000000000000000000003244 107.0
CMS1_k127_453303_6 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000002906 93.0
CMS1_k127_4542630_0 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 325.0
CMS1_k127_4542630_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000005386 145.0
CMS1_k127_4549897_0 prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 1.321e-241 758.0
CMS1_k127_4549897_1 chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 571.0
CMS1_k127_4549897_10 DEAD DEAH box helicase K06877 - - 0.00000000000000000000000000000003434 130.0
CMS1_k127_4549897_11 - - - - 0.0001846 44.0
CMS1_k127_4549897_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 446.0
CMS1_k127_4549897_3 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004682 280.0
CMS1_k127_4549897_4 MafB19-like deaminase K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000005371 263.0
CMS1_k127_4549897_5 Methyltransferase small domain K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000000000000000000000007247 247.0
CMS1_k127_4549897_6 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000002628 228.0
CMS1_k127_4549897_8 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000002162 166.0
CMS1_k127_4556575_0 SMART Elongator protein 3 MiaB NifB - - - 4.247e-288 901.0
CMS1_k127_4556575_1 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 317.0
CMS1_k127_4561689_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1118.0
CMS1_k127_4561689_1 AMP-binding enzyme C-terminal domain K05939 - 2.3.1.40,6.2.1.20 1.037e-252 788.0
CMS1_k127_4561689_10 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 473.0
CMS1_k127_4561689_11 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 450.0
CMS1_k127_4561689_12 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 447.0
CMS1_k127_4561689_13 Ligated ion channel L-glutamate- and glycine-binding site K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 414.0
CMS1_k127_4561689_14 protein conserved in bacteria K09760 GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 420.0
CMS1_k127_4561689_15 Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 406.0
CMS1_k127_4561689_16 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 367.0
CMS1_k127_4561689_17 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 342.0
CMS1_k127_4561689_18 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 340.0
CMS1_k127_4561689_19 histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 336.0
CMS1_k127_4561689_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 3.069e-249 778.0
CMS1_k127_4561689_20 transcriptional regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000003617 212.0
CMS1_k127_4561689_21 Belongs to the P(II) protein family K02589 - - 0.000000000000000000000000000000000000000000000000000000003232 201.0
CMS1_k127_4561689_22 Belongs to the P(II) protein family K02590 - - 0.000000000000000000000000000000000000000000000000000003857 193.0
CMS1_k127_4561689_23 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000000001835 173.0
CMS1_k127_4561689_24 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000001443 149.0
CMS1_k127_4561689_3 Pyridoxal-phosphate dependent enzyme K01754,K17989 - 4.3.1.17,4.3.1.19 9.427e-239 747.0
CMS1_k127_4561689_4 molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 548.0
CMS1_k127_4561689_5 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 528.0
CMS1_k127_4561689_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 518.0
CMS1_k127_4561689_7 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 507.0
CMS1_k127_4561689_8 ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 492.0
CMS1_k127_4561689_9 DNA polymerase III, delta' K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 487.0
CMS1_k127_4563683_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 5.526e-215 675.0
CMS1_k127_4563683_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 533.0
CMS1_k127_4563683_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000006019 220.0
CMS1_k127_4563683_3 - - - - 0.0000000000000000000000000000003174 131.0
CMS1_k127_4563683_4 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000726 125.0
CMS1_k127_4570708_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 2.207e-229 724.0
CMS1_k127_4570708_1 response regulator receiver K02481 - - 2.154e-211 665.0
CMS1_k127_4570708_10 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 320.0
CMS1_k127_4570708_11 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 314.0
CMS1_k127_4570708_12 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000001284 270.0
CMS1_k127_4570708_13 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000001196 252.0
CMS1_k127_4570708_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007344 244.0
CMS1_k127_4570708_15 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004489 245.0
CMS1_k127_4570708_16 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000008735 229.0
CMS1_k127_4570708_17 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000002134 219.0
CMS1_k127_4570708_18 - - - - 0.000000000000000000000000000000000000000000000000000004963 199.0
CMS1_k127_4570708_19 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000002101 179.0
CMS1_k127_4570708_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 3.371e-204 641.0
CMS1_k127_4570708_21 Belongs to the UPF0434 family K09791 - - 0.000000000000000003764 85.0
CMS1_k127_4570708_3 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 507.0
CMS1_k127_4570708_4 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 480.0
CMS1_k127_4570708_5 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 461.0
CMS1_k127_4570708_6 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 407.0
CMS1_k127_4570708_7 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 387.0
CMS1_k127_4570708_8 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 361.0
CMS1_k127_4570708_9 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 347.0
CMS1_k127_4574994_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 6.412e-249 782.0
CMS1_k127_4574994_1 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.00000000000000006889 81.0
CMS1_k127_4574994_2 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000002069 90.0
CMS1_k127_4577526_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 3.081e-262 816.0
CMS1_k127_4577526_1 ABC transporter K02031,K02032 - - 2.246e-242 759.0
CMS1_k127_4577526_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000000000004698 202.0
CMS1_k127_4577526_11 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000001591 162.0
CMS1_k127_4577526_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000519 157.0
CMS1_k127_4577526_13 Protein of unknown function (DUF2905) - - - 0.000000000000000003681 85.0
CMS1_k127_4577526_14 - - - - 0.00000000000000002398 86.0
CMS1_k127_4577526_15 Zinc-binding dehydrogenase - - - 0.0000001149 57.0
CMS1_k127_4577526_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 5.643e-218 688.0
CMS1_k127_4577526_3 Major Facilitator Superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 526.0
CMS1_k127_4577526_4 Endonuclease Exonuclease Phosphatase K06896,K12351 - 3.1.3.90,3.1.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 473.0
CMS1_k127_4577526_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 460.0
CMS1_k127_4577526_6 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 415.0
CMS1_k127_4577526_7 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
CMS1_k127_4577526_8 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000004817 227.0
CMS1_k127_4577526_9 amino acid ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000003733 213.0
CMS1_k127_4578692_0 ABC transporter K06158 - - 4.775e-271 843.0
CMS1_k127_4578692_1 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 598.0
CMS1_k127_4578692_2 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 386.0
CMS1_k127_4578692_3 PhoP regulatory network protein YrbL - - - 0.00000000000000008277 89.0
CMS1_k127_4595263_0 PFAM ATP-binding region ATPase domain protein - - - 1.731e-242 769.0
CMS1_k127_4595263_1 Protein of unknown function (DUF401) K09133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 552.0
CMS1_k127_4612948_0 RNA binding S1 domain protein K06959 - - 1.468e-199 632.0
CMS1_k127_4612948_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 378.0
CMS1_k127_4612948_2 EamA-like transporter family K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 323.0
CMS1_k127_4612948_3 Cytochrome C biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009648 255.0
CMS1_k127_4612948_4 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000004396 214.0
CMS1_k127_4612948_5 LysM domain K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000001869 151.0
CMS1_k127_4612948_6 LysM domain K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000009599 117.0
CMS1_k127_46140_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.345e-236 737.0
CMS1_k127_46140_1 Von Willebrand factor type A K02448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 556.0
CMS1_k127_46140_10 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000009019 205.0
CMS1_k127_46140_11 translation initiation factor activity K02237,K03497,K12065 - - 0.0000000000000000000000000000000000000000004896 169.0
CMS1_k127_46140_12 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000004617 160.0
CMS1_k127_46140_13 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002572 136.0
CMS1_k127_46140_14 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000001233 134.0
CMS1_k127_46140_16 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000009048 102.0
CMS1_k127_46140_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 471.0
CMS1_k127_46140_3 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 409.0
CMS1_k127_46140_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 375.0
CMS1_k127_46140_5 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 350.0
CMS1_k127_46140_6 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009167 252.0
CMS1_k127_46140_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000002163 253.0
CMS1_k127_46140_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
CMS1_k127_46140_9 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000004212 224.0
CMS1_k127_4626826_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 1.134e-268 850.0
CMS1_k127_4626826_1 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 4.676e-254 796.0
CMS1_k127_4626826_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 542.0
CMS1_k127_4626826_3 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 496.0
CMS1_k127_4626826_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 382.0
CMS1_k127_4626826_5 monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000005922 185.0
CMS1_k127_4626826_6 DsrE/DsrF-like family - - - 0.000000000000000000000000000000002811 136.0
CMS1_k127_4626826_7 Fic/DOC family - - - 0.0000006789 51.0
CMS1_k127_4630483_0 PFAM Sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 494.0
CMS1_k127_4630483_1 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 373.0
CMS1_k127_4630483_2 protein flavinylation K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000212 245.0
CMS1_k127_4630483_3 - - - - 0.00000000000000000000000000000000000005149 144.0
CMS1_k127_4630483_4 Transcriptional regulator - - - 0.00000000000000000000000000002048 122.0
CMS1_k127_4661150_0 type II secretion system K02454 - - 1.911e-250 786.0
CMS1_k127_4661150_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 4.66e-244 761.0
CMS1_k127_4661150_10 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007612 261.0
CMS1_k127_4661150_12 DNA integration - - - 0.0000000000000000003118 89.0
CMS1_k127_4661150_13 - - - - 0.00000000003148 69.0
CMS1_k127_4661150_14 - - - - 0.000000713 53.0
CMS1_k127_4661150_2 PFAM peptidase - - - 1.964e-206 659.0
CMS1_k127_4661150_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 457.0
CMS1_k127_4661150_4 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 443.0
CMS1_k127_4661150_5 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 366.0
CMS1_k127_4661150_6 NGG1p interacting factor 3 K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002744 278.0
CMS1_k127_4661150_7 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004965 274.0
CMS1_k127_4661150_8 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000108 269.0
CMS1_k127_4661150_9 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002762 257.0
CMS1_k127_4663711_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 370.0
CMS1_k127_4663711_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 319.0
CMS1_k127_4663711_2 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000002083 105.0
CMS1_k127_4666552_0 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 494.0
CMS1_k127_4668751_0 PFAM CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 0.0 1226.0
CMS1_k127_4668751_1 Nickel-dependent hydrogenase K06281 - 1.12.99.6 2.036e-197 627.0
CMS1_k127_4668751_10 Protein of unknown function (DUF2786) - - - 0.00000000000000000000000000000000000000000000000000000000000000001454 240.0
CMS1_k127_4668751_11 PFAM HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000001053 208.0
CMS1_k127_4668751_12 spore germination K03605,K04656,K08315 - 3.4.23.51 0.0000000000000000000000000000000000001451 147.0
CMS1_k127_4668751_13 Universal stress protein - - - 0.00000000000000000000000000000000007295 138.0
CMS1_k127_4668751_14 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000001312 127.0
CMS1_k127_4668751_15 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000001423 85.0
CMS1_k127_4668751_16 Protein of unknown function (DUF1294) - - - 0.00000000002376 66.0
CMS1_k127_4668751_2 Histidine Phosphotransfer domain K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 591.0
CMS1_k127_4668751_3 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 516.0
CMS1_k127_4668751_4 NADH ubiquinone oxidoreductase 20 kDa subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 466.0
CMS1_k127_4668751_5 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K02440,K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 434.0
CMS1_k127_4668751_6 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 437.0
CMS1_k127_4668751_7 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 368.0
CMS1_k127_4668751_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 345.0
CMS1_k127_4668751_9 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003375 282.0
CMS1_k127_4678860_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0 1116.0
CMS1_k127_4678860_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.161e-267 850.0
CMS1_k127_4678860_10 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 358.0
CMS1_k127_4678860_11 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 351.0
CMS1_k127_4678860_12 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 332.0
CMS1_k127_4678860_13 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 317.0
CMS1_k127_4678860_14 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000241 277.0
CMS1_k127_4678860_15 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000004098 209.0
CMS1_k127_4678860_16 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000004123 209.0
CMS1_k127_4678860_17 homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000006335 207.0
CMS1_k127_4678860_18 Protein of unknown function, DUF480 K09915 - - 0.00000000000000000000000000000000000000000000000000004911 194.0
CMS1_k127_4678860_19 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000004174 158.0
CMS1_k127_4678860_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 576.0
CMS1_k127_4678860_20 Universal stress protein family - - - 0.000000000000000000000000000000000005987 141.0
CMS1_k127_4678860_21 HemY protein - - - 0.000000000000000000000000000008649 125.0
CMS1_k127_4678860_22 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - - 0.0000000000000000000000002017 107.0
CMS1_k127_4678860_23 Dodecin K09165 - - 0.000000000000000000001286 95.0
CMS1_k127_4678860_3 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 524.0
CMS1_k127_4678860_4 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 523.0
CMS1_k127_4678860_5 Bacterial extracellular solute-binding protein K02027,K10117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 467.0
CMS1_k127_4678860_6 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 462.0
CMS1_k127_4678860_7 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 451.0
CMS1_k127_4678860_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586,K12526 - 2.7.2.4,4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 430.0
CMS1_k127_4678860_9 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 384.0
CMS1_k127_4693447_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 7.426e-236 736.0
CMS1_k127_4693447_1 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 448.0
CMS1_k127_4693447_2 phosphorelay sensor kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 373.0
CMS1_k127_4693447_3 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 331.0
CMS1_k127_4693447_4 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000159 261.0
CMS1_k127_4693447_5 Histidine kinase - - - 0.0000000000000000000000000000000000000002501 172.0
CMS1_k127_4698416_0 Cytochrome bd terminal oxidase subunit I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 313.0
CMS1_k127_4698416_1 oxidase subunit K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001312 273.0
CMS1_k127_4698416_2 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000001835 174.0
CMS1_k127_4698416_3 - - - - 0.0000000000005512 71.0
CMS1_k127_4713898_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K15792 - 6.3.2.10,6.3.2.13 7.475e-304 962.0
CMS1_k127_4713898_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 5.088e-257 803.0
CMS1_k127_4713898_10 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 520.0
CMS1_k127_4713898_11 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 488.0
CMS1_k127_4713898_12 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 475.0
CMS1_k127_4713898_13 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 415.0
CMS1_k127_4713898_14 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 420.0
CMS1_k127_4713898_15 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 400.0
CMS1_k127_4713898_16 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 403.0
CMS1_k127_4713898_17 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 397.0
CMS1_k127_4713898_18 Thiamine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 404.0
CMS1_k127_4713898_19 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 388.0
CMS1_k127_4713898_2 HEAT repeats - - - 6.643e-247 772.0
CMS1_k127_4713898_20 Uncharacterised protein family (UPF0014) K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 334.0
CMS1_k127_4713898_21 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 289.0
CMS1_k127_4713898_22 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002765 287.0
CMS1_k127_4713898_23 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001172 289.0
CMS1_k127_4713898_24 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000004294 266.0
CMS1_k127_4713898_25 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000003544 237.0
CMS1_k127_4713898_26 PFAM iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000008034 198.0
CMS1_k127_4713898_27 PFAM ABC transporter - - - 0.000000000000000000000000000000000000000000000000000366 191.0
CMS1_k127_4713898_28 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000001548 183.0
CMS1_k127_4713898_29 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000138 169.0
CMS1_k127_4713898_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 5.202e-206 651.0
CMS1_k127_4713898_30 Essential cell division protein K03589 - - 0.000000000000000000000000000000000000000000007735 176.0
CMS1_k127_4713898_32 PFAM iron dependent repressor K03709 - - 0.0000000000174 64.0
CMS1_k127_4713898_33 Rdx family K07401 - - 0.00000006636 55.0
CMS1_k127_4713898_34 PFAM IstB domain protein ATP-binding protein - - - 0.000006772 52.0
CMS1_k127_4713898_4 May be involved in recombinational repair of damaged DNA K03631 - - 3.081e-198 632.0
CMS1_k127_4713898_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 587.0
CMS1_k127_4713898_6 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 585.0
CMS1_k127_4713898_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 584.0
CMS1_k127_4713898_8 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 568.0
CMS1_k127_4713898_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 555.0
CMS1_k127_4718372_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1485.0
CMS1_k127_4718372_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1061.0
CMS1_k127_4718372_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 511.0
CMS1_k127_4718372_11 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 454.0
CMS1_k127_4718372_12 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 409.0
CMS1_k127_4718372_13 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 388.0
CMS1_k127_4718372_14 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 355.0
CMS1_k127_4718372_15 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 336.0
CMS1_k127_4718372_16 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
CMS1_k127_4718372_17 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 309.0
CMS1_k127_4718372_18 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005768 295.0
CMS1_k127_4718372_19 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000005904 265.0
CMS1_k127_4718372_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.251e-300 933.0
CMS1_k127_4718372_20 PFAM HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002833 266.0
CMS1_k127_4718372_21 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006563 254.0
CMS1_k127_4718372_22 triose-phosphate isomerase activity K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000007477 238.0
CMS1_k127_4718372_23 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000002387 237.0
CMS1_k127_4718372_24 phosphoserine phosphatase activity K00003,K07166 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000004661 225.0
CMS1_k127_4718372_25 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000000000000000000000008451 211.0
CMS1_k127_4718372_26 Glycine zipper 2TM domain - - - 0.000000000000000000000000000000000000000000000000007836 184.0
CMS1_k127_4718372_27 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000002171 186.0
CMS1_k127_4718372_28 YGGT family K02221 - - 0.00000000000000000000000000000000000000000003911 162.0
CMS1_k127_4718372_29 regulation of cell shape K04074,K06997 - - 0.0000000000000000000000000000000000000000004698 168.0
CMS1_k127_4718372_3 Molecular chaperone. Has ATPase activity K04079 - - 7.404e-298 923.0
CMS1_k127_4718372_30 - - - - 0.000000000000000000000000000000000000009939 149.0
CMS1_k127_4718372_31 - - - - 0.0000000000000000000000000000006758 131.0
CMS1_k127_4718372_32 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.0000000000000000001096 93.0
CMS1_k127_4718372_33 Belongs to the UPF0235 family K09131 - - 0.0000000000000003489 82.0
CMS1_k127_4718372_4 Uncharacterised ACR (DUF711) K09157 - - 4.955e-250 778.0
CMS1_k127_4718372_5 pfam abc-1 K03688 - - 8.398e-247 773.0
CMS1_k127_4718372_6 Belongs to the GPI family K01810 - 5.3.1.9 4.748e-213 673.0
CMS1_k127_4718372_7 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 7.381e-204 650.0
CMS1_k127_4718372_8 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008681 585.0
CMS1_k127_4718372_9 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 538.0
CMS1_k127_4720005_0 PFAM MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 340.0
CMS1_k127_4720005_1 Flagellar motor switch protein FliM K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 323.0
CMS1_k127_4720005_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008856 276.0
CMS1_k127_4720005_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000001028 187.0
CMS1_k127_474545_0 4Fe-4S single cluster domain - - - 2.636e-208 649.0
CMS1_k127_474545_1 Beta-ketoacyl synthase, C-terminal domain - - - 3.192e-198 623.0
CMS1_k127_474545_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 577.0
CMS1_k127_474545_3 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 478.0
CMS1_k127_474545_4 Peptidase family U32 - - - 0.00000000000000000000000000000000000000000000000000000000000002712 229.0
CMS1_k127_474545_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000001176 183.0
CMS1_k127_474545_6 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000296 137.0
CMS1_k127_474545_7 FabA-like domain - - - 0.0000000000000000000000000001504 118.0
CMS1_k127_4749114_0 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 514.0
CMS1_k127_4749114_1 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000005355 234.0
CMS1_k127_4749114_2 SprA-related family - - - 0.00000000000000000000000000000000002075 144.0
CMS1_k127_4756708_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1207.0
CMS1_k127_4756708_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1197.0
CMS1_k127_4756708_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000008081 163.0
CMS1_k127_4756708_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000001089 160.0
CMS1_k127_4756708_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.038e-301 928.0
CMS1_k127_4756708_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.986e-286 881.0
CMS1_k127_4756708_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 2.719e-212 676.0
CMS1_k127_4756708_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 440.0
CMS1_k127_4756708_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001423 271.0
CMS1_k127_4756708_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000000002325 236.0
CMS1_k127_4756708_8 PFAM Isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000000005046 210.0
CMS1_k127_4756708_9 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000005051 192.0
CMS1_k127_4766742_0 Hydantoinase/oxoprolinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 571.0
CMS1_k127_4766742_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 396.0
CMS1_k127_4766742_2 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 342.0
CMS1_k127_4766742_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 297.0
CMS1_k127_4766742_4 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009821 250.0
CMS1_k127_4766742_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000005785 230.0
CMS1_k127_4766742_6 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000002308 224.0
CMS1_k127_4780336_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 329.0
CMS1_k127_4780336_1 HIT domain K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000004466 236.0
CMS1_k127_4780336_2 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000004524 209.0
CMS1_k127_4780336_3 class II (D K and N) K04568 - - 0.000000000000000000000000000000000000000000000003543 174.0
CMS1_k127_4786150_0 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 565.0
CMS1_k127_4786150_1 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 546.0
CMS1_k127_4786150_2 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 451.0
CMS1_k127_4786150_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 432.0
CMS1_k127_4786150_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000001467 209.0
CMS1_k127_4817042_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 1.662e-287 892.0
CMS1_k127_4817042_1 Pfam:CPSase_L_chain - - - 3.793e-266 823.0
CMS1_k127_4817042_10 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 325.0
CMS1_k127_4817042_11 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001687 261.0
CMS1_k127_4817042_12 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000001488 186.0
CMS1_k127_4817042_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 3.431e-201 632.0
CMS1_k127_4817042_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 564.0
CMS1_k127_4817042_4 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 546.0
CMS1_k127_4817042_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 527.0
CMS1_k127_4817042_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 503.0
CMS1_k127_4817042_7 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 343.0
CMS1_k127_4817042_8 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 340.0
CMS1_k127_4817042_9 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 338.0
CMS1_k127_4847114_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 586.0
CMS1_k127_4847114_1 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 574.0
CMS1_k127_4847114_10 ABC transporter K02003 - - 0.00001323 47.0
CMS1_k127_4847114_2 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 510.0
CMS1_k127_4847114_3 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 390.0
CMS1_k127_4847114_4 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004849 260.0
CMS1_k127_4847114_5 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008027 260.0
CMS1_k127_4847114_6 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000001324 240.0
CMS1_k127_4847114_7 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000005378 198.0
CMS1_k127_4847114_8 - - - - 0.00000000000000000001603 94.0
CMS1_k127_4859687_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 309.0
CMS1_k127_4859687_1 PFAM lipid A biosynthesis domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002718 243.0
CMS1_k127_4859687_2 AAA domain K02450 - - 0.00000000000000000000000000000000000002069 147.0
CMS1_k127_4864088_0 Bacterial regulatory protein, Fis family K02481,K07713 - - 4.492e-217 681.0
CMS1_k127_4864088_1 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 601.0
CMS1_k127_4864088_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 593.0
CMS1_k127_4864088_3 Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 484.0
CMS1_k127_4864088_4 Cache_2 K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 426.0
CMS1_k127_4864088_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000007693 181.0
CMS1_k127_4864088_6 Oxygen tolerance - - - 0.0000000000000000000000000000000717 133.0
CMS1_k127_4877857_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1252.0
CMS1_k127_4877857_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.0 1021.0
CMS1_k127_4877857_2 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 328.0
CMS1_k127_4877857_3 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 302.0
CMS1_k127_4877857_4 Papain-like cysteine protease AvrRpt2 K06992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009784 278.0
CMS1_k127_4877857_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001733 275.0
CMS1_k127_4877857_6 - - - - 0.0000000000004097 76.0
CMS1_k127_4877857_7 - - - - 0.00007062 45.0
CMS1_k127_4916980_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 2.85e-295 913.0
CMS1_k127_4916980_1 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 9.097e-285 882.0
CMS1_k127_4916980_10 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001375 233.0
CMS1_k127_4916980_11 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000000000000002372 221.0
CMS1_k127_4916980_12 PFAM conserved K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000005904 169.0
CMS1_k127_4916980_13 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.000000000000000000000000000000000000438 144.0
CMS1_k127_4916980_14 cell redox homeostasis K03671 - - 0.00000004236 59.0
CMS1_k127_4916980_15 Roadblock/LC7 domain - - - 0.0000001036 53.0
CMS1_k127_4916980_2 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 5.289e-257 805.0
CMS1_k127_4916980_3 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 376.0
CMS1_k127_4916980_4 PFAM 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 350.0
CMS1_k127_4916980_5 - K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 349.0
CMS1_k127_4916980_6 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 299.0
CMS1_k127_4916980_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001865 284.0
CMS1_k127_4916980_8 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004004 273.0
CMS1_k127_4916980_9 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000006614 233.0
CMS1_k127_4938281_0 ATP-binding region, ATPase domain protein - - - 6.225e-204 660.0
CMS1_k127_4938281_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 452.0
CMS1_k127_4938281_2 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 423.0
CMS1_k127_4938281_3 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 304.0
CMS1_k127_4938281_4 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000069 278.0
CMS1_k127_4948212_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 7.398e-245 762.0
CMS1_k127_4948212_1 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 413.0
CMS1_k127_4948212_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000173 258.0
CMS1_k127_4948212_3 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000002728 219.0
CMS1_k127_4948212_4 CGGC - - - 0.000000000000000000000000000000001181 134.0
CMS1_k127_4960090_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 7.383e-196 628.0
CMS1_k127_4960090_1 mannitol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 417.0
CMS1_k127_4960090_10 PFAM Glutaredoxin K06191 - - 0.0000000000000000000000002607 108.0
CMS1_k127_4960090_11 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000007782 83.0
CMS1_k127_4960090_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 390.0
CMS1_k127_4960090_3 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 341.0
CMS1_k127_4960090_4 Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 300.0
CMS1_k127_4960090_5 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009953 298.0
CMS1_k127_4960090_6 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000005848 191.0
CMS1_k127_4960090_7 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000000000000000000000000000000000000001793 166.0
CMS1_k127_4960090_8 Universal stress protein family - - - 0.00000000000000000000000000000000000000000002095 169.0
CMS1_k127_4960090_9 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000331 125.0
CMS1_k127_497822_0 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 556.0
CMS1_k127_497822_1 PFAM CBS domain K04767 - - 0.000001576 51.0
CMS1_k127_5002642_0 BadF BadG BcrA BcrD - - - 0.0 1477.0
CMS1_k127_5002642_1 belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 1.664e-213 674.0
CMS1_k127_5002642_2 PFAM type II secretion system protein E K02669 - - 1.317e-206 646.0
CMS1_k127_5002642_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 582.0
CMS1_k127_5002642_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 548.0
CMS1_k127_5002642_5 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 432.0
CMS1_k127_5002642_6 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 404.0
CMS1_k127_5002642_7 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 329.0
CMS1_k127_5002642_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 297.0
CMS1_k127_5002642_9 - - - - 0.000000000000000000000000000000000000000000000000004271 186.0
CMS1_k127_5008037_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006741 480.0
CMS1_k127_5008037_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 492.0
CMS1_k127_5008037_2 PFAM Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 417.0
CMS1_k127_5008037_3 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 375.0
CMS1_k127_5008037_4 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 359.0
CMS1_k127_5008037_5 heterodisulfide reductase, subunit K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000055 288.0
CMS1_k127_5008037_6 cheY-homologous receiver domain K07773 - - 0.000000000000000000000000000000000000000000000000002529 184.0
CMS1_k127_5008037_7 aspartate kinase activity - - - 0.000000000000003225 82.0
CMS1_k127_5027574_0 Glycine radical K00656,K07540 - 2.3.1.54,4.1.99.11 0.0 1012.0
CMS1_k127_5027574_1 glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 320.0
CMS1_k127_5041216_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 528.0
CMS1_k127_5041216_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000009928 228.0
CMS1_k127_50464_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00087,K11177 - 1.17.1.4 1.33e-239 758.0
CMS1_k127_50464_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 447.0
CMS1_k127_50464_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 394.0
CMS1_k127_50464_3 Uncharacterized protein family (UPF0051) K07033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 334.0
CMS1_k127_50464_4 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000004169 238.0
CMS1_k127_50464_5 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000009415 190.0
CMS1_k127_50464_6 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000001908 94.0
CMS1_k127_50464_7 ABC transporter K09013 - - 0.000000000002197 68.0
CMS1_k127_5052376_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 484.0
CMS1_k127_5052376_1 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 344.0
CMS1_k127_5052376_2 PFAM Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000000000000000000000000000000001104 246.0
CMS1_k127_5052376_3 PFAM ABC transporter K02013 - 3.6.3.34 0.0000000000000003299 79.0
CMS1_k127_5062923_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 3.592e-310 959.0
CMS1_k127_5062923_1 PFAM Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 310.0
CMS1_k127_5062923_2 Sel1-like repeats. - - - 0.000000000000000000000000000000000005787 149.0
CMS1_k127_5062923_3 Mediates influx of magnesium ions K03284 - - 0.00007484 49.0
CMS1_k127_5069613_0 DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 1.167e-270 848.0
CMS1_k127_5069613_1 cheY-homologous receiver domain - - - 0.00000000000000000000000006715 111.0
CMS1_k127_5081904_0 Aminotransferase class-III K09251 - 2.6.1.82 2.841e-212 668.0
CMS1_k127_5081904_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.787e-202 645.0
CMS1_k127_5081904_2 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 513.0
CMS1_k127_5081904_3 TOBE domain K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 469.0
CMS1_k127_5081904_4 spermidine putrescine transport system, permease K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 452.0
CMS1_k127_5081904_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 443.0
CMS1_k127_5081904_6 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 389.0
CMS1_k127_5081904_7 transcriptional regulator K16137,K18476 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005645 266.0
CMS1_k127_5081904_8 Bacterial protein of unknown function (DUF945) - - - 0.0000000000000000000000000000000002057 134.0
CMS1_k127_5081904_9 PFAM thiamineS protein - - - 0.0000000000125 68.0
CMS1_k127_5113728_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 7.074e-231 722.0
CMS1_k127_5113728_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 2.772e-219 689.0
CMS1_k127_5113728_10 WYL domain K13573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 324.0
CMS1_k127_5113728_11 OstA-like protein K09774 - - 0.0000000000000000000000000000000000000000000000001539 183.0
CMS1_k127_5113728_12 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000008379 137.0
CMS1_k127_5113728_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 2.512e-217 678.0
CMS1_k127_5113728_3 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 557.0
CMS1_k127_5113728_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 488.0
CMS1_k127_5113728_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 480.0
CMS1_k127_5113728_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 451.0
CMS1_k127_5113728_7 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 406.0
CMS1_k127_5113728_8 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 363.0
CMS1_k127_5113728_9 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 340.0
CMS1_k127_5122621_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1357.0
CMS1_k127_5122621_1 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1121.0
CMS1_k127_5122621_11 Predicted RNA-binding protein - - - 0.000000000007635 68.0
CMS1_k127_5122621_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 541.0
CMS1_k127_5122621_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 533.0
CMS1_k127_5122621_4 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 501.0
CMS1_k127_5122621_5 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 352.0
CMS1_k127_5122621_6 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 316.0
CMS1_k127_5122621_7 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000001144 130.0
CMS1_k127_5122621_8 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.00000000000000000006798 91.0
CMS1_k127_5122621_9 Pentapeptide repeats (8 copies) - - - 0.000000000000000001737 89.0
CMS1_k127_514736_0 PFAM Response regulator receiver domain K02481,K07712,K07713 - - 1.466e-230 726.0
CMS1_k127_514736_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 582.0
CMS1_k127_514736_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 426.0
CMS1_k127_5151249_0 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 8.874e-292 924.0
CMS1_k127_5151249_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 496.0
CMS1_k127_5151249_2 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001087 272.0
CMS1_k127_5151249_3 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000003114 229.0
CMS1_k127_5156177_0 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 7.225e-210 656.0
CMS1_k127_5156177_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 9.064e-204 640.0
CMS1_k127_5156177_10 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000113 169.0
CMS1_k127_5156177_11 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000004177 149.0
CMS1_k127_5156177_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000007142 122.0
CMS1_k127_5156177_13 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000003112 111.0
CMS1_k127_5156177_14 ParB domain protein nuclease K03497 - - 0.00000000000000000001422 104.0
CMS1_k127_5156177_15 type II secretion system K02653 - - 0.0000000001515 61.0
CMS1_k127_5156177_2 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 557.0
CMS1_k127_5156177_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009663 454.0
CMS1_k127_5156177_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 433.0
CMS1_k127_5156177_5 PFAM Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 416.0
CMS1_k127_5156177_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 412.0
CMS1_k127_5156177_7 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 369.0
CMS1_k127_5156177_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000121 278.0
CMS1_k127_5156177_9 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000006771 176.0
CMS1_k127_5170181_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 7.723e-231 719.0
CMS1_k127_5170181_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000004603 263.0
CMS1_k127_5170181_2 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
CMS1_k127_5170181_3 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000001854 133.0
CMS1_k127_5170181_4 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000002115 128.0
CMS1_k127_5170181_5 B12 binding domain - - - 0.000000000000000000000206 97.0
CMS1_k127_51811_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 1.884e-277 872.0
CMS1_k127_51811_1 Predicted permease K07089 - - 1.076e-213 671.0
CMS1_k127_51811_10 TIGRFAM redox-active disulfide protein 2 - - - 0.0000000000000000000000003196 106.0
CMS1_k127_51811_11 - - - - 0.00000000000000004499 86.0
CMS1_k127_51811_2 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 483.0
CMS1_k127_51811_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 458.0
CMS1_k127_51811_4 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 363.0
CMS1_k127_51811_5 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 351.0
CMS1_k127_51811_6 binding domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000005755 237.0
CMS1_k127_51811_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000003488 181.0
CMS1_k127_51811_8 Universal stress protein - - - 0.0000000000000000000000000000000000000000007241 161.0
CMS1_k127_51811_9 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000003515 156.0
CMS1_k127_5194936_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 573.0
CMS1_k127_5194936_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 463.0
CMS1_k127_5194936_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 452.0
CMS1_k127_5194936_3 PFAM Ubiquitin-conjugating - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 441.0
CMS1_k127_5194936_4 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001362 263.0
CMS1_k127_5194936_5 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
CMS1_k127_5194936_6 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000007056 212.0
CMS1_k127_5200393_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 528.0
CMS1_k127_5200393_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 - - 0.00000000000000000000000000000004231 128.0
CMS1_k127_5200393_2 chemotaxis K03408 - - 0.0000000000000003658 85.0
CMS1_k127_5200393_3 Uncharacterized conserved protein (DUF2293) - - - 0.000000000005037 67.0
CMS1_k127_5215925_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1447.0
CMS1_k127_5215925_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000001176 94.0
CMS1_k127_5233376_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 478.0
CMS1_k127_5233376_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000691 240.0
CMS1_k127_5233376_2 Sodium:sulfate symporter transmembrane region K14445 - - 0.000000000000000000000000000000000000000000000000000000009235 199.0
CMS1_k127_5233376_3 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000006206 115.0
CMS1_k127_5240281_0 plastoquinone (complex I) K05568,K12137 - - 2.852e-300 929.0
CMS1_k127_5240281_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.506e-259 805.0
CMS1_k127_5240281_10 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 293.0
CMS1_k127_5240281_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008086 256.0
CMS1_k127_5240281_12 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000019 230.0
CMS1_k127_5240281_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001549 226.0
CMS1_k127_5240281_14 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000007302 209.0
CMS1_k127_5240281_15 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000002332 201.0
CMS1_k127_5240281_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.00000000000000000000000000000000000000000004296 163.0
CMS1_k127_5240281_17 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05574 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000003831 81.0
CMS1_k127_5240281_2 Proton-conducting membrane transporter K05568 - - 2.488e-258 802.0
CMS1_k127_5240281_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 8.66e-216 673.0
CMS1_k127_5240281_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 608.0
CMS1_k127_5240281_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 523.0
CMS1_k127_5240281_6 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 510.0
CMS1_k127_5240281_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 506.0
CMS1_k127_5240281_8 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 488.0
CMS1_k127_5240281_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 307.0
CMS1_k127_5280265_0 ABC transporter transmembrane region 2 K17938 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015291,GO:0015638,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0019534,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0042884,GO:0042885,GO:0042886,GO:0042887,GO:0042891,GO:0042895,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:1901998,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 553.0
CMS1_k127_5280265_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 479.0
CMS1_k127_5280265_2 hemolysin III K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002218 255.0
CMS1_k127_5280265_3 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002635 251.0
CMS1_k127_5280265_4 Rhodanese Homology Domain K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000009492 223.0
CMS1_k127_5280265_5 Protein of unknown function (DUF3999) - - - 0.00000000000000003665 87.0
CMS1_k127_5287232_0 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 546.0
CMS1_k127_5287232_1 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 387.0
CMS1_k127_5287232_2 FAD linked oxidase K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 384.0
CMS1_k127_5287232_3 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 353.0
CMS1_k127_5287232_4 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 344.0
CMS1_k127_5287232_5 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 317.0
CMS1_k127_533341_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1614.0
CMS1_k127_533341_1 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002342 251.0
CMS1_k127_533341_2 DJ-1/PfpI family K03152,K05520,K05687,K12132 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009100,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019538,GO:0022613,GO:0030091,GO:0033554,GO:0034599,GO:0036211,GO:0036524,GO:0036525,GO:0042026,GO:0042221,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 2.7.11.1,3.5.1.124 0.00000000000000000000000000000000000000000000000000000009081 203.0
CMS1_k127_533341_3 protein conserved in bacteria K09966 - - 0.000000000000000000000000000000000000000000000001607 177.0
CMS1_k127_533341_4 Domain of unknown function (DUF309) - - - 0.0000000000000000000000000000000000389 141.0
CMS1_k127_533341_5 MutT nudix family protein - - - 0.0000000000000000000000000000741 121.0
CMS1_k127_533341_6 - - - - 0.0000000000000000000000000003569 115.0
CMS1_k127_533341_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000006697 115.0
CMS1_k127_533341_8 - - - - 0.00001262 49.0
CMS1_k127_5348721_0 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 500.0
CMS1_k127_5348721_1 PFAM peptidase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 444.0
CMS1_k127_5348721_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000001508 228.0
CMS1_k127_5348721_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000001913 100.0
CMS1_k127_535496_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.619e-246 771.0
CMS1_k127_535496_1 Molydopterin dinucleotide binding domain - - - 4.984e-195 622.0
CMS1_k127_5355459_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1444.0
CMS1_k127_5355459_1 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1334.0
CMS1_k127_5355459_10 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000001105 201.0
CMS1_k127_5355459_11 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000001242 192.0
CMS1_k127_5355459_12 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000001295 191.0
CMS1_k127_5355459_13 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000003171 153.0
CMS1_k127_5355459_14 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000001639 132.0
CMS1_k127_5355459_15 - - - - 0.0000000000000000000000000032 122.0
CMS1_k127_5355459_16 heat shock protein binding - - - 0.000000000000000003681 85.0
CMS1_k127_5355459_17 - - - - 0.000000000004695 67.0
CMS1_k127_5355459_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 7.803e-222 693.0
CMS1_k127_5355459_3 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 564.0
CMS1_k127_5355459_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 389.0
CMS1_k127_5355459_5 glutamine amidotransferase K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 319.0
CMS1_k127_5355459_6 Belongs to the Nudix hydrolase family. NudC subfamily K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 291.0
CMS1_k127_5355459_7 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000006257 241.0
CMS1_k127_5355459_8 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000003681 237.0
CMS1_k127_5355459_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004184 224.0
CMS1_k127_5361855_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 534.0
CMS1_k127_5361855_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 480.0
CMS1_k127_5361855_2 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 354.0
CMS1_k127_5361855_3 Cellulose biosynthesis protein BcsQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001139 270.0
CMS1_k127_5361855_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000001459 156.0
CMS1_k127_5361855_5 PFAM 4Fe-4S ferredoxin - - - 0.00000000000000000000000000002133 119.0
CMS1_k127_5369881_0 COG1834 N-Dimethylarginine dimethylaminohydrolase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 370.0
CMS1_k127_5369881_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 319.0
CMS1_k127_5369881_2 Belongs to the bacterial solute-binding protein 3 family K10018 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 310.0
CMS1_k127_5369881_3 COG4160 ABC-type arginine histidine transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 293.0
CMS1_k127_5369881_4 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K10021,K10025 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 286.0
CMS1_k127_5369881_5 ABC transporter K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 284.0
CMS1_k127_5369881_6 cytochrome c K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006502 261.0
CMS1_k127_537338_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 286.0
CMS1_k127_537338_1 Phospholipid N-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000003028 205.0
CMS1_k127_537338_2 - - - - 0.000000000000000000000000000000000000001259 153.0
CMS1_k127_5374589_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006691 346.0
CMS1_k127_5376060_0 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009988 497.0
CMS1_k127_5376060_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 434.0
CMS1_k127_5376060_10 Motility quorum-sensing regulator, toxin of MqsA K13651 - - 0.000009475 49.0
CMS1_k127_5376060_2 PFAM Phosphomethylpyrimidine kinase type-1 K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 377.0
CMS1_k127_5376060_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 338.0
CMS1_k127_5376060_4 WLM domain K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001044 249.0
CMS1_k127_5376060_5 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000000000000000000002034 185.0
CMS1_k127_5376060_6 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000001046 132.0
CMS1_k127_5376060_7 Protein of unknown function (DUF2799) - - - 0.00000000000000000000000000000001141 135.0
CMS1_k127_5376060_8 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000001937 112.0
CMS1_k127_5376060_9 ABC transporter K02049,K10831,K15555 - 3.6.3.36 0.0000000000003118 78.0
CMS1_k127_5425049_0 ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 619.0
CMS1_k127_5425049_1 ABC transporter substrate-binding protein PnrA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 537.0
CMS1_k127_5425049_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 464.0
CMS1_k127_5425049_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 453.0
CMS1_k127_5425049_4 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 439.0
CMS1_k127_5425049_5 ABC transporter transmembrane region K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 391.0
CMS1_k127_5426366_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 424.0
CMS1_k127_5426366_1 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 347.0
CMS1_k127_5426366_2 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000003066 204.0
CMS1_k127_5426366_3 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000002559 145.0
CMS1_k127_5426366_4 - - - - 0.0000000000000000000002443 98.0
CMS1_k127_5426366_5 - - - - 0.0000000000000004836 85.0
CMS1_k127_5438277_0 PFAM NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 565.0
CMS1_k127_5438277_1 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 481.0
CMS1_k127_5438277_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 346.0
CMS1_k127_5438277_3 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000191 281.0
CMS1_k127_5438277_4 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002094 260.0
CMS1_k127_5438277_5 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001803 236.0
CMS1_k127_5438277_6 ADP-ribose pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000003204 221.0
CMS1_k127_5438277_7 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000586 199.0
CMS1_k127_5438277_8 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000001803 144.0
CMS1_k127_5438277_9 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000008672 114.0
CMS1_k127_5438642_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 2.157e-267 831.0
CMS1_k127_5438642_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 511.0
CMS1_k127_5438642_2 addiction module antidote protein HigA K21498 - - 0.000000000000000000000000000000000000000000000001327 175.0
CMS1_k127_5438642_3 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000000000000002504 142.0
CMS1_k127_5438642_4 Mechanosensitive ion channel K22044 - - 0.00000000002801 65.0
CMS1_k127_5441058_0 E1-E2 ATPase K17686 - 3.6.3.54 2.264e-320 994.0
CMS1_k127_5441058_1 extracellular solute-binding K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 509.0
CMS1_k127_5441058_2 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 393.0
CMS1_k127_5441058_3 ABC transporter K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003371 286.0
CMS1_k127_5441058_4 protein trimerization K01448 - 3.5.1.28 0.000000000000000000000000000000000000000007262 158.0
CMS1_k127_5441058_5 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000086 61.0
CMS1_k127_5488217_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0031224,GO:0031226,GO:0034641,GO:0036094,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072524,GO:0097159,GO:1901265,GO:1901360,GO:1901363,GO:1901564 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 451.0
CMS1_k127_5488217_1 cofactor biosynthesis protein NifB K02585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 383.0
CMS1_k127_5488217_2 - - - - 0.000000000000000000000000000000000000000000000005449 175.0
CMS1_k127_5489427_0 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 400.0
CMS1_k127_5489427_1 PFAM PfkB K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 347.0
CMS1_k127_5489427_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 298.0
CMS1_k127_5489427_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007067 274.0
CMS1_k127_5489427_4 Histidine kinase - - - 0.0000000000000000000000000000000000002021 154.0
CMS1_k127_5489427_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000002452 130.0
CMS1_k127_5509396_0 Protein of unknown function (DUF3683) - - - 0.0 1467.0
CMS1_k127_5509396_1 PFAM Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004981 237.0
CMS1_k127_5515156_0 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 7.175e-248 786.0
CMS1_k127_5515156_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.746e-244 780.0
CMS1_k127_5515156_2 PFAM IstB domain protein ATP-binding protein - - - 0.0000009448 51.0
CMS1_k127_5522675_0 PFAM Acetyl-CoA hydrolase transferase - - - 1.294e-241 761.0
CMS1_k127_5522675_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000001608 141.0
CMS1_k127_552513_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 1.47e-321 988.0
CMS1_k127_552513_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 537.0
CMS1_k127_552513_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000008721 195.0
CMS1_k127_552513_3 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000000000288 184.0
CMS1_k127_552513_4 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000105 181.0
CMS1_k127_552513_5 MltA-interacting protein MipA - - - 0.0000000000000000000000000000000000000000000000003079 185.0
CMS1_k127_552513_6 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000001478 169.0
CMS1_k127_5532771_0 SNF2 family N-terminal domain - - - 0.0 1546.0
CMS1_k127_5532771_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.498e-253 799.0
CMS1_k127_5532771_10 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000004057 200.0
CMS1_k127_5532771_11 recombinase activity - - - 0.00000000000000000000000000000000000000000000000002112 187.0
CMS1_k127_5532771_12 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000006108 170.0
CMS1_k127_5532771_13 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000000000000001469 107.0
CMS1_k127_5532771_14 - - - - 0.0000000000000000000000005625 107.0
CMS1_k127_5532771_15 Protein of unknown function (DUF3096) - - - 0.00000000000003301 73.0
CMS1_k127_5532771_2 PFAM ABC transporter K15738 - - 3.752e-243 765.0
CMS1_k127_5532771_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 589.0
CMS1_k127_5532771_4 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 459.0
CMS1_k127_5532771_5 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 435.0
CMS1_k127_5532771_6 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 289.0
CMS1_k127_5532771_7 ligase activity K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 287.0
CMS1_k127_5532771_8 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008945 274.0
CMS1_k127_5532771_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000007869 225.0
CMS1_k127_5541873_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.154e-206 650.0
CMS1_k127_5541873_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 578.0
CMS1_k127_5541873_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004753 240.0
CMS1_k127_5542670_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 385.0
CMS1_k127_5542670_1 FCD - - - 0.00000000000000000000000000000000000000000007847 168.0
CMS1_k127_5542670_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000002656 82.0
CMS1_k127_5549678_1 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000000000000000000000000002101 211.0
CMS1_k127_5549678_2 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000000001266 187.0
CMS1_k127_5549678_3 DnaJ molecular chaperone homology domain K03686 - - 0.00000000000000000000000000000000000000000000003289 179.0
CMS1_k127_5549678_4 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000003513 86.0
CMS1_k127_5549678_5 Protein of unknown function K09800 - - 0.00000009635 63.0
CMS1_k127_5549678_6 Belongs to the ompA family K03286 - - 0.0000003612 55.0
CMS1_k127_5550123_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 325.0
CMS1_k127_5550123_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001678 265.0
CMS1_k127_5550123_2 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001451 258.0
CMS1_k127_5550123_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000000000000000007389 207.0
CMS1_k127_5550123_4 methyltransferase - - - 0.0000000000000000000000000000000000001957 145.0
CMS1_k127_5550123_5 - - - - 0.000000000004667 70.0
CMS1_k127_5550123_6 Response regulator, receiver - - - 0.000000005707 57.0
CMS1_k127_5550123_7 - - - - 0.000002395 51.0
CMS1_k127_5554697_0 cysteine protease - - - 0.0 1054.0
CMS1_k127_5554697_1 arsenite transmembrane transporter activity - - - 1.31e-216 689.0
CMS1_k127_5554697_2 Chitinase class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 361.0
CMS1_k127_5554697_3 Universal stress protein family - - - 0.00000000000000000000000000000000006242 145.0
CMS1_k127_5558669_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 602.0
CMS1_k127_5558669_1 Dihydroxyacetone kinase family K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 583.0
CMS1_k127_5558669_2 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 465.0
CMS1_k127_5558669_3 lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 408.0
CMS1_k127_5558669_4 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 310.0
CMS1_k127_5577856_0 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 383.0
CMS1_k127_5577856_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 364.0
CMS1_k127_5577856_2 impB/mucB/samB family K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 360.0
CMS1_k127_5577856_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 293.0
CMS1_k127_5577856_4 DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000004437 84.0
CMS1_k127_5584846_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 7.644e-314 970.0
CMS1_k127_5584846_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 7.618e-225 701.0
CMS1_k127_5584846_2 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 582.0
CMS1_k127_5584846_3 Histidine Phosphotransfer domain K02488,K11443 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 466.0
CMS1_k127_5584846_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 424.0
CMS1_k127_5584846_5 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 334.0
CMS1_k127_5584846_6 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 307.0
CMS1_k127_5593556_0 Binding-protein-dependent transport system inner membrane component K09970 - - 3.554e-195 614.0
CMS1_k127_5593556_1 Binding-protein-dependent transport system inner membrane component K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 594.0
CMS1_k127_5593556_2 Bacterial extracellular solute-binding proteins, family 3 K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 567.0
CMS1_k127_5593556_3 ABC transporter K02028,K09972,K10004,K10038 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 452.0
CMS1_k127_5593556_4 PFAM Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 381.0
CMS1_k127_5593556_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 323.0
CMS1_k127_5593556_6 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004231 254.0
CMS1_k127_5593556_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000009328 201.0
CMS1_k127_5603770_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847 - 5.4.99.2 0.0 1271.0
CMS1_k127_5603770_1 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 0.0 1068.0
CMS1_k127_5603770_10 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 - 6.2.1.1,6.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 415.0
CMS1_k127_5603770_11 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 412.0
CMS1_k127_5603770_12 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 340.0
CMS1_k127_5603770_13 isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 297.0
CMS1_k127_5603770_14 GPR1/FUN34/yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 293.0
CMS1_k127_5603770_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001046 249.0
CMS1_k127_5603770_16 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000001266 187.0
CMS1_k127_5603770_17 Biotin-requiring enzyme - - - 0.00000000000000000000000000003823 120.0
CMS1_k127_5603770_18 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000008889 100.0
CMS1_k127_5603770_2 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1011.0
CMS1_k127_5603770_3 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 7.025e-282 871.0
CMS1_k127_5603770_4 PFAM Acetyl-CoA hydrolase transferase - - - 1.036e-248 782.0
CMS1_k127_5603770_5 Psort location CytoplasmicMembrane, score 10.00 K01572 - 4.1.1.3 4.864e-200 628.0
CMS1_k127_5603770_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 573.0
CMS1_k127_5603770_7 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 518.0
CMS1_k127_5603770_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 490.0
CMS1_k127_5603770_9 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 461.0
CMS1_k127_5614_0 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 484.0
CMS1_k127_5614_1 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000000000008471 209.0
CMS1_k127_5614_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000005455 182.0
CMS1_k127_5614_3 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000000000000009653 160.0
CMS1_k127_5614_4 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000005475 92.0
CMS1_k127_5637147_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 524.0
CMS1_k127_5637147_1 COG0845 Membrane-fusion protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 438.0
CMS1_k127_5637147_2 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000005875 198.0
CMS1_k127_5637326_0 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.0 1203.0
CMS1_k127_5637326_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.761e-285 888.0
CMS1_k127_5637326_10 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K02114 - - 0.00000000000000000000000000000000000000000006689 164.0
CMS1_k127_5637326_11 Universal stress protein - - - 0.00000000000000000000000000000000000008069 147.0
CMS1_k127_5637326_12 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000002121 142.0
CMS1_k127_5637326_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000004589 139.0
CMS1_k127_5637326_14 ATP synthase B/B' CF(0) K02109 - - 0.000000000000000000000000000000000006874 147.0
CMS1_k127_5637326_15 - - - - 0.00000000000000000000000000000003703 128.0
CMS1_k127_5637326_16 TIGRFAM F0F1-ATPase subunit K02116 - - 0.000000000000000000000000001609 121.0
CMS1_k127_5637326_17 TIGRFAM F1 F0 ATPase, Methanosarcina type, subunit 2 - - - 0.00000008695 57.0
CMS1_k127_5637326_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.829e-250 788.0
CMS1_k127_5637326_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.478e-209 662.0
CMS1_k127_5637326_4 ATP synthase alpha/beta chain, C terminal domain K02112 - 3.6.3.14 9.015e-198 627.0
CMS1_k127_5637326_5 4-alpha-glucanotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 583.0
CMS1_k127_5637326_6 ATP synthase A chain K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 304.0
CMS1_k127_5637326_7 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002339 271.0
CMS1_k127_5637326_8 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 259.0
CMS1_k127_5637326_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000004747 250.0
CMS1_k127_5641205_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 7.616e-299 924.0
CMS1_k127_5641205_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000858 453.0
CMS1_k127_5641205_2 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 344.0
CMS1_k127_5641205_3 Peptidase family U32 - - - 0.00000000000000000000000000000000000000000000000000000000000000002022 230.0
CMS1_k127_5641205_4 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.0000000000000000000000000000000000000000000000000000000000002674 235.0
CMS1_k127_5641205_5 Male sterility protein - - - 0.0000000000000000000000000000000009015 148.0
CMS1_k127_5641205_6 Dienelactone hydrolase family - - - 0.000000000000000000000000000001416 130.0
CMS1_k127_56462_0 metal-dependent hydrolase with the TIM-barrel fold - - - 6.133e-233 732.0
CMS1_k127_56462_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 3.285e-227 712.0
CMS1_k127_56462_2 extracellular solute-binding protein, family 1 K11069 - - 1.76e-213 664.0
CMS1_k127_56462_3 PFAM TrkA-N domain K03499 - - 6.581e-198 626.0
CMS1_k127_56462_4 ABC transporter K02017,K11072 - 3.6.3.29,3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 582.0
CMS1_k127_56462_5 Proline racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 482.0
CMS1_k127_56462_6 dTDP-4-dehydrorhamnose reductase activity K00067,K19997 - 1.1.1.133,5.1.3.26 0.000000000000000000000000000000001644 132.0
CMS1_k127_5666584_0 Cytochrome C and Quinol oxidase polypeptide I K02274,K02298 - 1.10.3.10,1.9.3.1 1.445e-272 846.0
CMS1_k127_5666584_1 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 313.0
CMS1_k127_5666584_2 Cytochrome C oxidase subunit II, transmembrane domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005948 266.0
CMS1_k127_5666584_3 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000000000000000000000005968 123.0
CMS1_k127_5666584_4 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000003283 78.0
CMS1_k127_5696292_0 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 535.0
CMS1_k127_5696292_1 Hydrogenase maturation protease K00442 - - 0.000000000000000000000000000000000000000000000000000000000000000002062 231.0
CMS1_k127_5696292_2 Sigma-54 interaction domain - - - 0.00000000122 63.0
CMS1_k127_5698546_0 belongs to the aldehyde dehydrogenase family - - - 6.488e-231 721.0
CMS1_k127_5698546_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 606.0
CMS1_k127_5698546_2 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 370.0
CMS1_k127_5698546_3 Dehydrogenase K18120,K19954 - 1.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 334.0
CMS1_k127_5698546_4 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000004753 227.0
CMS1_k127_5698546_5 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000004996 226.0
CMS1_k127_5698546_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K04069 - 1.97.1.4 0.0000000000000000000009118 95.0
CMS1_k127_5698546_7 Lipid A 3-O-deacylase (PagL) - - - 0.000005226 55.0
CMS1_k127_5732478_0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 284.0
CMS1_k127_5732478_1 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000003534 220.0
CMS1_k127_5732478_10 EamA-like transporter family - - - 0.00000000000000000000002184 104.0
CMS1_k127_5732478_11 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000002239 97.0
CMS1_k127_5732478_12 ABC transporter K05776 - - 0.00000001368 58.0
CMS1_k127_5732478_13 integral membrane protein - - - 0.00003625 55.0
CMS1_k127_5732478_2 C-terminal region of band_7 - - - 0.000000000000000000000000000000000000000000000000000000000007098 213.0
CMS1_k127_5732478_3 Thioesterase superfamily K10806 - - 0.000000000000000000000000000000000000000000000000009888 183.0
CMS1_k127_5732478_4 of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000001243 181.0
CMS1_k127_5732478_5 Dihydrofolate reductase K00287,K18589 - 1.5.1.3 0.000000000000000000000000000000000000005827 151.0
CMS1_k127_5732478_6 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000008873 139.0
CMS1_k127_5732478_7 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000002932 125.0
CMS1_k127_5732478_8 nitric oxide dioxygenase activity - - - 0.00000000000000000000000000003912 126.0
CMS1_k127_5732478_9 - - - - 0.000000000000000000000001323 104.0
CMS1_k127_5739978_0 PrkA serine protein kinase C-terminal domain - - - 0.0 1062.0
CMS1_k127_5739978_1 SpoVR like protein K06415 - - 2.609e-239 750.0
CMS1_k127_5739978_2 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 469.0
CMS1_k127_5739978_3 G T U mismatch-specific DNA glycosylase - - - 0.00000000000000000000000000000000000000003382 154.0
CMS1_k127_5742592_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1825.0
CMS1_k127_5742592_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1007.0
CMS1_k127_5742592_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 398.0
CMS1_k127_5742592_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 316.0
CMS1_k127_5742592_4 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001605 264.0
CMS1_k127_5742592_5 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000006163 168.0
CMS1_k127_5742592_6 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000003277 105.0
CMS1_k127_5759772_0 Pyridine nucleotide-disulphide oxidoreductase - - - 7.024e-291 934.0
CMS1_k127_5759772_1 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 1.041e-235 743.0
CMS1_k127_5759772_10 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000001197 228.0
CMS1_k127_5759772_11 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000007842 188.0
CMS1_k127_5759772_12 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000002864 181.0
CMS1_k127_5759772_13 ABC transporter K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000002368 178.0
CMS1_k127_5759772_15 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000004468 152.0
CMS1_k127_5759772_16 TIGRFAM DNA binding domain - - - 0.000000000000000000000000000000000000002294 147.0
CMS1_k127_5759772_17 cheY-homologous receiver domain K07773 - - 0.0000000000000000000000000000000004425 134.0
CMS1_k127_5759772_2 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 442.0
CMS1_k127_5759772_3 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 413.0
CMS1_k127_5759772_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 401.0
CMS1_k127_5759772_5 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 344.0
CMS1_k127_5759772_6 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009921 338.0
CMS1_k127_5759772_7 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 325.0
CMS1_k127_5759772_8 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 286.0
CMS1_k127_5759772_9 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000001538 263.0
CMS1_k127_5759850_0 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 554.0
CMS1_k127_5759850_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 517.0
CMS1_k127_5759850_10 branched-chain amino acid K01995 - - 0.0000000000000000000000001251 109.0
CMS1_k127_5759850_11 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000148 83.0
CMS1_k127_5759850_12 Acetyltransferase (GNAT) domain K14682 - 2.3.1.1 0.00000003448 65.0
CMS1_k127_5759850_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 492.0
CMS1_k127_5759850_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 343.0
CMS1_k127_5759850_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 337.0
CMS1_k127_5759850_5 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 326.0
CMS1_k127_5759850_6 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 322.0
CMS1_k127_5759850_7 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 295.0
CMS1_k127_5759850_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000001533 171.0
CMS1_k127_5759850_9 - - - - 0.000000000000000000000000000000000000000127 157.0
CMS1_k127_5777536_0 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 494.0
CMS1_k127_5777536_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000001566 202.0
CMS1_k127_5777536_2 modulation by symbiont of host adenylate cyclase-mediated signal transduction K01802,K03774,K03775 - 5.2.1.8 0.000000000000000000000000000000000000000004513 161.0
CMS1_k127_5777536_3 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000004118 138.0
CMS1_k127_5777536_4 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000003784 90.0
CMS1_k127_5795911_0 UvrD REP helicase K03657 - 3.6.4.12 2.085e-312 977.0
CMS1_k127_5795911_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 489.0
CMS1_k127_5795911_2 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 438.0
CMS1_k127_5795911_3 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 411.0
CMS1_k127_5795911_4 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 384.0
CMS1_k127_5795911_5 PFAM TM2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004804 222.0
CMS1_k127_5795911_6 - - - - 0.000000000000000000000000000000000000000000000000004513 186.0
CMS1_k127_5795911_7 PFAM HNH endonuclease K07451 - - 0.000000000000000000000000000000000000000000003767 169.0
CMS1_k127_580190_0 PFAM Oligopeptide transporter OPT superfamily - - - 0.0 1207.0
CMS1_k127_580190_1 - - - - 1.271e-211 664.0
CMS1_k127_580190_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000174 207.0
CMS1_k127_580190_3 - - - - 0.00000000000000000000000000000000000000000000000000000002486 203.0
CMS1_k127_580190_4 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000000000000000009851 121.0
CMS1_k127_580190_5 - - - - 0.00000000003734 74.0
CMS1_k127_580190_6 - - - - 0.0000002885 58.0
CMS1_k127_5802420_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008144,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0097159,GO:0097367,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 448.0
CMS1_k127_5802420_1 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 327.0
CMS1_k127_5802420_2 Binding-protein-dependent transport system inner membrane component K11070 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 310.0
CMS1_k127_5802420_3 ABC-type spermidine putrescine transport system, permease component I K11071 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 306.0
CMS1_k127_5802420_4 PFAM Lytic transglycosylase-like, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 302.0
CMS1_k127_5825278_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 1.17e-288 895.0
CMS1_k127_5825278_1 PFAM amino acid permease-associated region K03294 - - 1.86e-207 654.0
CMS1_k127_5825278_2 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 550.0
CMS1_k127_5825278_3 PFAM response regulator receiver K02481,K07712 - - 0.0000000000000000000000000000000000000000000000000005504 189.0
CMS1_k127_5825278_4 transcriptional regulator - - - 0.0000000000000000000003 102.0
CMS1_k127_5828580_0 lysine 2,3-aminomutase activity - - - 0.0 1085.0
CMS1_k127_5828580_1 Binding-protein-dependent transport system inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 524.0
CMS1_k127_5828580_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 406.0
CMS1_k127_5828580_3 heme binding K21472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 304.0
CMS1_k127_5828580_4 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002532 278.0
CMS1_k127_5828580_5 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005913 235.0
CMS1_k127_5828580_6 Transcriptional regulator IclR - - - 0.000000000000000000000000000000000000000000004699 173.0
CMS1_k127_5828580_7 extracellular solute-binding protein, family 1 K11069 - - 0.000000000000000000000000000000007578 132.0
CMS1_k127_5828580_8 PA14 domain - - - 0.0000000000001423 78.0
CMS1_k127_5828580_9 GtrA-like protein - - - 0.000000000006663 72.0
CMS1_k127_5843498_0 Sodium hydrogen exchanger K03316 - - 1.565e-305 947.0
CMS1_k127_5843498_1 Belongs to the ABC transporter superfamily K02031,K02032,K10824,K15587,K16786,K16787 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 555.0
CMS1_k127_5843498_2 Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 537.0
CMS1_k127_5843498_3 Domain of unknown function (DUF4198) K02009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 407.0
CMS1_k127_5843498_4 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001414 267.0
CMS1_k127_5843498_5 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000003385 240.0
CMS1_k127_5843498_6 - - - - 0.000000000000000000000000000000000000001128 153.0
CMS1_k127_5843498_7 - - - - 0.000000000000000000000000000000000001838 139.0
CMS1_k127_5843498_8 Large extracellular alpha-helical protein K16915 - - 0.00000000000000000000000000003238 120.0
CMS1_k127_584583_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 439.0
CMS1_k127_584583_1 PFAM regulatory protein GntR HTH K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 398.0
CMS1_k127_584583_2 Bacterial extracellular solute-binding protein K02064 - - 0.0005673 46.0
CMS1_k127_5887489_0 PFAM Radical SAM domain protein K22227 - - 8.705e-200 627.0
CMS1_k127_5887489_2 - - - - 0.0000000000000000000000000000000000000000000000005483 181.0
CMS1_k127_5887489_3 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000001387 159.0
CMS1_k127_5887489_4 - - - - 0.00000000000000000000002922 100.0
CMS1_k127_5887489_5 - - - - 0.00000000000000000006836 92.0
CMS1_k127_5887489_6 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.000000000005922 70.0
CMS1_k127_5887489_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0001147 45.0
CMS1_k127_5924197_0 Sigma-54 interaction domain K00575 - 2.1.1.80 7.632e-220 698.0
CMS1_k127_5924197_1 Belongs to the aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 535.0
CMS1_k127_5924197_2 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 283.0
CMS1_k127_5928564_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0 1159.0
CMS1_k127_5928564_1 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000004101 173.0
CMS1_k127_5980933_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.149e-217 689.0
CMS1_k127_5980933_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 469.0
CMS1_k127_5980933_2 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000287 275.0
CMS1_k127_5980933_3 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000000000001277 131.0
CMS1_k127_5980933_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000721 108.0
CMS1_k127_5980933_5 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000007772 71.0
CMS1_k127_5993484_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 3.798e-262 817.0
CMS1_k127_5993484_1 Beta-Casp domain K07576 - - 2.621e-206 647.0
CMS1_k127_5993484_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 383.0
CMS1_k127_5993484_3 Transport Permease Protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 330.0
CMS1_k127_5993484_4 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000003227 193.0
CMS1_k127_5993484_5 Belongs to the prokaryotic GSH synthase family K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.0000000000000000000000000000000000000000001031 173.0
CMS1_k127_5993484_6 ISXO2-like transposase domain - - - 0.00000000000000000000000000001799 123.0
CMS1_k127_5993484_7 Glutathione S-transferase, N-terminal domain - - - 0.0000000002981 64.0
CMS1_k127_6002132_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 9.42e-218 682.0
CMS1_k127_6002132_1 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 513.0
CMS1_k127_6002132_2 TIGRFAM electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 508.0
CMS1_k127_6002132_3 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 509.0
CMS1_k127_6002132_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 438.0
CMS1_k127_6002132_5 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 425.0
CMS1_k127_6002132_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 368.0
CMS1_k127_6002132_7 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 347.0
CMS1_k127_6002132_8 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 321.0
CMS1_k127_6062170_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1297.0
CMS1_k127_6062170_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 3.683e-233 727.0
CMS1_k127_6067721_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.55e-306 945.0
CMS1_k127_6067721_1 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 540.0
CMS1_k127_6067721_2 PFAM Alpha amylase, catalytic K00690,K05341,K05343 - 2.4.1.4,2.4.1.7,3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 339.0
CMS1_k127_6067721_3 CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000000006843 162.0
CMS1_k127_609191_0 Predicted membrane protein (DUF2339) - - - 5.282e-219 709.0
CMS1_k127_609191_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 501.0
CMS1_k127_609191_10 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000746 184.0
CMS1_k127_609191_11 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000009188 125.0
CMS1_k127_609191_2 RelA SpoT - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 498.0
CMS1_k127_609191_3 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 432.0
CMS1_k127_609191_4 OmpA MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 423.0
CMS1_k127_609191_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 360.0
CMS1_k127_609191_6 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 329.0
CMS1_k127_609191_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 317.0
CMS1_k127_609191_8 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000003154 208.0
CMS1_k127_609191_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000008257 198.0
CMS1_k127_617131_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.042e-211 665.0
CMS1_k127_617131_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 422.0
CMS1_k127_617131_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000001782 192.0
CMS1_k127_6189409_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0 1969.0
CMS1_k127_6189409_1 Belongs to the UbiD family K03182 - 4.1.1.98 2.329e-311 960.0
CMS1_k127_6189409_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 291.0
CMS1_k127_6189409_11 NIL - - - 0.000000000000000000000000000000000000000000000000000000000000002779 220.0
CMS1_k127_6189409_12 PFAM purine or other phosphorylase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000597 221.0
CMS1_k127_6189409_13 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000107 187.0
CMS1_k127_6189409_14 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000000000000000000007764 167.0
CMS1_k127_6189409_15 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000009692 162.0
CMS1_k127_6189409_16 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000002097 151.0
CMS1_k127_6189409_18 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000000000000000000000000000001169 131.0
CMS1_k127_6189409_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 1.173e-237 743.0
CMS1_k127_6189409_20 - - - - 0.000000001123 62.0
CMS1_k127_6189409_3 PFAM aminotransferase class-III K01845 - 5.4.3.8 5.186e-211 665.0
CMS1_k127_6189409_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 590.0
CMS1_k127_6189409_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 565.0
CMS1_k127_6189409_6 synthase K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 561.0
CMS1_k127_6189409_7 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 461.0
CMS1_k127_6189409_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 424.0
CMS1_k127_6189409_9 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 289.0
CMS1_k127_623934_0 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 3.719e-200 629.0
CMS1_k127_623934_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 456.0
CMS1_k127_623934_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000005378 198.0
CMS1_k127_623934_3 NDK K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000001647 114.0
CMS1_k127_6271939_0 transporter antisigma-factor antagonist STAS K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 436.0
CMS1_k127_6271939_1 Sigma-54 interaction domain K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 398.0
CMS1_k127_6271939_2 Amino-transferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 330.0
CMS1_k127_6271939_3 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000001023 183.0
CMS1_k127_635245_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 499.0
CMS1_k127_635245_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 306.0
CMS1_k127_635245_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.000000000000000000000000000000000000000000000000000000000000000001742 233.0
CMS1_k127_635245_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000006578 182.0
CMS1_k127_635245_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000002072 111.0
CMS1_k127_638633_0 AAA domain K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 397.0
CMS1_k127_638633_1 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003498 283.0
CMS1_k127_638633_2 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006473 266.0
CMS1_k127_638633_3 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000000000000005387 179.0
CMS1_k127_638633_4 part of a sulfur-relay system - - - 0.00000000000000000000000002658 109.0
CMS1_k127_638633_5 Universal stress protein - - - 0.000000000000000006448 89.0
CMS1_k127_683711_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1240.0
CMS1_k127_683711_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0 1007.0
CMS1_k127_683711_10 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 291.0
CMS1_k127_683711_11 threonine efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003268 281.0
CMS1_k127_683711_12 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001022 279.0
CMS1_k127_683711_13 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006532 221.0
CMS1_k127_683711_14 - K07039 - - 0.00000000000000000000000000000000000000000000000000000000000001356 219.0
CMS1_k127_683711_15 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000001549 216.0
CMS1_k127_683711_16 Protein of unknown function (DUF2878) - - - 0.00000000000000000000000000000000000000000000000000000001839 202.0
CMS1_k127_683711_17 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000008697 192.0
CMS1_k127_683711_18 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000002569 186.0
CMS1_k127_683711_19 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000009317 174.0
CMS1_k127_683711_2 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 1.712e-311 972.0
CMS1_k127_683711_20 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000004496 163.0
CMS1_k127_683711_21 AMP binding - - - 0.00000000000000000000000000000000000000006971 156.0
CMS1_k127_683711_22 Protein of unknown function DUF134 - - - 0.000000000000000000000000000000000000001261 150.0
CMS1_k127_683711_23 Thioesterase - - - 0.000000000000000000000000000000000008553 141.0
CMS1_k127_683711_24 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000002837 125.0
CMS1_k127_683711_25 VanZ like family - - - 0.00000000000000000000000000001295 124.0
CMS1_k127_683711_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 5.852e-305 940.0
CMS1_k127_683711_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.479e-245 761.0
CMS1_k127_683711_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.245e-233 727.0
CMS1_k127_683711_6 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 3.314e-212 665.0
CMS1_k127_683711_7 response regulator receiver K13599 - - 3.699e-211 664.0
CMS1_k127_683711_8 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 589.0
CMS1_k127_683711_9 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 576.0
CMS1_k127_710389_0 Hydantoinase oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1675.0
CMS1_k127_710389_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.487e-263 819.0
CMS1_k127_710389_10 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000001269 233.0
CMS1_k127_710389_11 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006371 229.0
CMS1_k127_710389_12 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000329 212.0
CMS1_k127_710389_13 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000001145 78.0
CMS1_k127_710389_2 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.068e-257 804.0
CMS1_k127_710389_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.63e-208 657.0
CMS1_k127_710389_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 505.0
CMS1_k127_710389_5 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 480.0
CMS1_k127_710389_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 471.0
CMS1_k127_710389_7 PFAM ABC transporter related K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 392.0
CMS1_k127_710389_8 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 283.0
CMS1_k127_710389_9 PilZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004168 285.0
CMS1_k127_7116_0 HELICc2 K03722 - 3.6.4.12 1.548e-247 782.0
CMS1_k127_7116_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 2.177e-210 671.0
CMS1_k127_7116_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 379.0
CMS1_k127_7116_3 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 359.0
CMS1_k127_7116_4 - - - - 0.00000001525 57.0
CMS1_k127_71744_0 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 426.0
CMS1_k127_71744_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 356.0
CMS1_k127_71744_2 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 284.0
CMS1_k127_71744_3 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000633 248.0
CMS1_k127_71744_4 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000176 242.0
CMS1_k127_71744_5 - - - - 0.00000000000000000000000000000000000000000000008442 171.0
CMS1_k127_71744_6 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000000000000008363 159.0
CMS1_k127_71744_7 manually curated K06039 - - 0.000000000000000002489 86.0
CMS1_k127_71744_8 Transporter LysE - - - 0.0000000000000002177 80.0
CMS1_k127_732080_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 3.16e-284 877.0
CMS1_k127_732080_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 536.0
CMS1_k127_735499_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 578.0
CMS1_k127_735499_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 578.0
CMS1_k127_735499_2 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 479.0
CMS1_k127_735499_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000167 259.0
CMS1_k127_780418_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 4.916e-201 631.0
CMS1_k127_780418_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 391.0
CMS1_k127_780418_2 Methyltransferase domain - - - 0.00000000000000002689 87.0
CMS1_k127_788408_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 5.764e-238 743.0
CMS1_k127_788408_1 Acetyl-coenzyme A transporter 1 K08218 - - 3.608e-198 630.0
CMS1_k127_788408_2 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 299.0
CMS1_k127_793223_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 589.0
CMS1_k127_793223_1 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 515.0
CMS1_k127_793223_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000005749 213.0
CMS1_k127_793223_11 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.0000000000000000000000000000000000000000000002482 175.0
CMS1_k127_793223_12 PFAM NosL family protein - - - 0.000000000000000000000000000000000000000000001405 171.0
CMS1_k127_793223_13 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000001159 159.0
CMS1_k127_793223_14 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000474 151.0
CMS1_k127_793223_15 regulatory protein, FmdB family - - - 0.0000000000000000000000001577 111.0
CMS1_k127_793223_16 - - - - 0.0000000000000002873 83.0
CMS1_k127_793223_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 447.0
CMS1_k127_793223_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 437.0
CMS1_k127_793223_4 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 377.0
CMS1_k127_793223_5 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 364.0
CMS1_k127_793223_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 343.0
CMS1_k127_793223_7 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006826 275.0
CMS1_k127_793223_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003954 270.0
CMS1_k127_793223_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
CMS1_k127_843808_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 469.0
CMS1_k127_843808_1 Belongs to the peptidase S11 family K01286,K07258,K07262 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 361.0
CMS1_k127_843808_2 Belongs to the ompA family K03286 - - 0.000000000000000000000000003657 119.0
CMS1_k127_871892_0 Histidine kinase - - - 1.504e-238 761.0
CMS1_k127_871892_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 9.354e-227 707.0
CMS1_k127_871892_10 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000003164 82.0
CMS1_k127_871892_11 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00002315 47.0
CMS1_k127_871892_2 BFD-like [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 593.0
CMS1_k127_871892_3 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 563.0
CMS1_k127_871892_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 505.0
CMS1_k127_871892_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 498.0
CMS1_k127_871892_6 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 288.0
CMS1_k127_871892_7 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001858 261.0
CMS1_k127_871892_8 Tripartite ATP-independent periplasmic transporters, DctQ component K21394 - - 0.00000000000000000000000000000000000000000000000000000000000000002349 228.0
CMS1_k127_871892_9 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000008119 171.0
CMS1_k127_874942_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1559.0
CMS1_k127_874942_1 AcrB/AcrD/AcrF family K03296 - - 0.0 1504.0
CMS1_k127_874942_10 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000000002456 101.0
CMS1_k127_874942_11 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000004335 96.0
CMS1_k127_874942_12 PFAM Heavy metal transport detoxification protein K07213 - - 0.0000000000000003363 80.0
CMS1_k127_874942_2 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 548.0
CMS1_k127_874942_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 518.0
CMS1_k127_874942_4 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 445.0
CMS1_k127_874942_5 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 358.0
CMS1_k127_874942_6 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 348.0
CMS1_k127_874942_7 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 331.0
CMS1_k127_874942_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004517 274.0
CMS1_k127_874942_9 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000000000000004504 164.0
CMS1_k127_876563_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 558.0
CMS1_k127_876563_1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 523.0
CMS1_k127_876563_2 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 439.0
CMS1_k127_88562_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 8.336e-253 785.0
CMS1_k127_88562_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 467.0
CMS1_k127_88562_2 tRNA (guanine(37)-N(1))-methyltransferase activity K15429 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000007684 270.0
CMS1_k127_88562_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000002722 120.0
CMS1_k127_88562_4 RNA-metabolising metallo-beta-lactamase K07576 - - 0.00000000000001318 74.0
CMS1_k127_906870_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 1.634e-209 655.0
CMS1_k127_906870_1 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 588.0
CMS1_k127_906870_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000005094 141.0
CMS1_k127_906870_11 - - - - 0.000000000000004472 77.0
CMS1_k127_906870_12 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 0.00005664 47.0
CMS1_k127_906870_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 535.0
CMS1_k127_906870_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 447.0
CMS1_k127_906870_4 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 434.0
CMS1_k127_906870_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 431.0
CMS1_k127_906870_6 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 348.0
CMS1_k127_906870_7 PFAM SEC-C motif K09858 - - 0.000000000000000000000000000000000000000000000173 172.0
CMS1_k127_906870_8 protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000002089 160.0
CMS1_k127_906870_9 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.000000000000000000000000000000000000000002137 161.0
CMS1_k127_911316_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.0 1101.0
CMS1_k127_911316_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 509.0
CMS1_k127_911316_2 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 301.0
CMS1_k127_911316_3 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003679 253.0
CMS1_k127_911316_4 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000002242 191.0
CMS1_k127_911316_5 Sodium Bile acid symporter family - - - 0.000000000000000000000000000000000000000000000106 180.0
CMS1_k127_911316_6 - - - - 0.00000000000000006011 88.0
CMS1_k127_916817_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 389.0
CMS1_k127_916817_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.000000000000000002903 91.0
CMS1_k127_916817_2 PAS domain - - - 0.0000000000171 71.0
CMS1_k127_930532_0 Radical SAM ThiC family K03147 - 4.1.99.17 3.506e-233 726.0
CMS1_k127_930532_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 404.0
CMS1_k127_930532_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 372.0
CMS1_k127_930532_3 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000475 286.0
CMS1_k127_930532_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001492 256.0
CMS1_k127_930532_5 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.00000000000000000000000000000000000000000000000000000000000000001291 235.0
CMS1_k127_930532_6 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000002093 63.0
CMS1_k127_930532_7 2Fe-2S iron-sulfur cluster binding domain K00123 - 1.17.1.9 0.000003356 51.0
CMS1_k127_930532_8 Aconitate B N-terminal domain K01682 - 4.2.1.3,4.2.1.99 0.0005921 45.0
CMS1_k127_931244_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1792.0
CMS1_k127_931244_1 Conserved carboxylase domain K01958 - 6.4.1.1 0.0 1016.0
CMS1_k127_931244_10 ligase activity, forming carbon-carbon bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 347.0
CMS1_k127_931244_11 Dicarboxylate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 358.0
CMS1_k127_931244_12 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 331.0
CMS1_k127_931244_13 Lysine methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 325.0
CMS1_k127_931244_14 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 321.0
CMS1_k127_931244_15 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 315.0
CMS1_k127_931244_16 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 303.0
CMS1_k127_931244_17 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 306.0
CMS1_k127_931244_18 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003986 241.0
CMS1_k127_931244_19 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000791 244.0
CMS1_k127_931244_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.927e-313 972.0
CMS1_k127_931244_20 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000000000000000000000000000000000002482 216.0
CMS1_k127_931244_21 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000003413 200.0
CMS1_k127_931244_22 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000005663 188.0
CMS1_k127_931244_23 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000004601 181.0
CMS1_k127_931244_24 Protein of unknown function (DUF1318) K09978 - - 0.00000000000000000000000000000009281 130.0
CMS1_k127_931244_25 - - - - 0.00000000000000000000000000002886 123.0
CMS1_k127_931244_26 Helix-turn-helix domain K15539 - - 0.0000000000000000000000001271 115.0
CMS1_k127_931244_27 PFAM Rhodanese domain protein - - - 0.00000000000000000000001584 107.0
CMS1_k127_931244_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.312e-253 803.0
CMS1_k127_931244_4 PFAM Carbamoyl-phosphate synthase L chain K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 1.712e-247 770.0
CMS1_k127_931244_5 Belongs to the CarA family K01956 - 6.3.5.5 5.031e-207 653.0
CMS1_k127_931244_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 583.0
CMS1_k127_931244_7 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 460.0
CMS1_k127_931244_8 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 379.0
CMS1_k127_931244_9 biotin-[acetyl-CoA-carboxylase] ligase activity K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 368.0
CMS1_k127_941950_0 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 368.0
CMS1_k127_941950_1 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 286.0
CMS1_k127_941950_2 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.0000000000000000000000000000000000000000006265 163.0
CMS1_k127_957425_0 DEAD DEAH box helicase K06877 - - 0.0 1098.0
CMS1_k127_957425_1 SH3 domain - - - 0.0000000000000000000000000000000000000000000000009313 177.0
CMS1_k127_96907_0 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 480.0
CMS1_k127_96907_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 402.0
CMS1_k127_96907_11 SnoaL-like polyketide cyclase - - - 0.000000000000004538 82.0
CMS1_k127_96907_12 Belongs to the HesB IscA family - - - 0.000000000000006875 79.0
CMS1_k127_96907_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 332.0
CMS1_k127_96907_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 318.0
CMS1_k127_96907_4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 284.0
CMS1_k127_96907_5 arylamine N-acetyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000003536 230.0
CMS1_k127_96907_6 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000003555 229.0
CMS1_k127_96907_7 Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively K04099,K05713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006066,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009698,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019622,GO:0019748,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046271,GO:0046395,GO:0046435,GO:0046872,GO:0046914,GO:0047070,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.16,1.13.11.57 0.00000000000000000000000000000000000000000000000000000000005298 216.0
CMS1_k127_96907_8 FCD - - - 0.0000000000000000000000000000000003262 139.0
CMS1_k127_96907_9 Glycosyltransferase, MGT family - - - 0.000000000000000000000000000003962 134.0
CMS1_k127_980964_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 522.0
CMS1_k127_980964_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 462.0
CMS1_k127_980964_2 cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009813 303.0
CMS1_k127_980964_3 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000507 254.0
CMS1_k127_984119_0 TIGRFAM precorrin-3B C17-methyltransferase K05934,K13541,K21479 - 2.1.1.131,2.1.1.272,3.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 358.0
CMS1_k127_984119_1 Putative multidrug resistance efflux transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 364.0
CMS1_k127_984119_2 Belongs to the precorrin methyltransferase family K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 336.0
CMS1_k127_984119_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 297.0
CMS1_k127_984119_4 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 - 2.1.1.132 0.00000000000000000000000000000000000000000000000000000000003526 210.0
CMS1_k127_984119_5 precorrin-3B C17-methyltransferase K13541 - 2.1.1.131,3.7.1.12 0.0000000000000000000000000000000000000399 158.0
CMS1_k127_984119_6 Lytic transglycolase - - - 0.000000000000000000000000000000000156 136.0
CMS1_k127_984119_7 Rubredoxin - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000001235 108.0
CMS1_k127_984119_8 DsrE/DsrF-like family - - - 0.0000102 49.0
CMS1_k127_984119_9 Major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0004324 52.0
CMS1_k127_991064_0 Flavin containing amine oxidoreductase - - - 1.372e-248 775.0
CMS1_k127_991064_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 6.621e-214 669.0
CMS1_k127_991064_10 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000004978 138.0
CMS1_k127_991064_11 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000421 118.0
CMS1_k127_991064_12 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.000002829 53.0
CMS1_k127_991064_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 5.462e-212 671.0
CMS1_k127_991064_3 PFAM FAD dependent oxidoreductase K09835,K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 570.0
CMS1_k127_991064_4 cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 418.0
CMS1_k127_991064_5 Elongation factor Tu domain 2 K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 397.0
CMS1_k127_991064_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 347.0
CMS1_k127_991064_7 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 336.0
CMS1_k127_991064_8 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 321.0
CMS1_k127_991064_9 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000001844 177.0
CMS1_k127_99497_0 Bacterial extracellular solute-binding protein K02027,K05813 - - 1.224e-250 778.0
CMS1_k127_99497_1 TOBE domain K05816,K10111,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 586.0
CMS1_k127_99497_10 - - - - 0.00000000000000000001644 95.0
CMS1_k127_99497_11 - - - - 0.000000000002556 77.0
CMS1_k127_99497_12 lipid A biosynthesis acyltransferase - - - 0.000000007043 57.0
CMS1_k127_99497_2 Binding-protein-dependent transport system inner membrane component K05815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 550.0
CMS1_k127_99497_3 Glycerol dehydrogenase and related enzymes K00096 - 1.1.1.261 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 554.0
CMS1_k127_99497_4 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 534.0
CMS1_k127_99497_5 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 552.0
CMS1_k127_99497_6 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000003901 200.0
CMS1_k127_99497_7 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000005799 195.0
CMS1_k127_99497_8 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000001203 163.0
CMS1_k127_99497_9 PFAM Tetratricopeptide - - - 0.00000000000000000000000000001183 131.0
CMS1_k127_99565_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 448.0
CMS1_k127_99565_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 404.0
CMS1_k127_99565_2 Major facilitator superfamily K08224 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 387.0
CMS1_k127_99565_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
CMS1_k127_99565_4 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001172 271.0
CMS1_k127_99565_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006848 244.0
CMS1_k127_99565_6 pseudouridine synthase activity K06177,K06179,K06180 - 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000006666 240.0
CMS1_k127_99565_7 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000581 222.0
CMS1_k127_99565_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000004004 138.0
CMS1_k127_99565_9 P-loop ATPase protein family K06958 - - 0.0000000000000000000000000000000003975 135.0