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Overview

ID MAG00375
Name CMS1_bin.63
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Campylobacterota
Class Campylobacteria
Order Campylobacterales
Family Sulfurimonadaceae
Genus GCA-2733885
Species
Assembly information
Completeness (%) 82.9
Contamination (%) 2.43
GC content (%) 46.0
N50 (bp) 16,432
Genome size (bp) 2,032,269

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1990

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1002257_0 cofactor biosynthesis protein NifE K02587 - - 2.306e-266 824.0
CMS1_k127_1002257_1 Belongs to the NifD NifK NifE NifN family K02592 - - 2.646e-212 666.0
CMS1_k127_1002257_10 NifZ domain K02597 - - 0.000000000000000000848 91.0
CMS1_k127_1002257_2 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 376.0
CMS1_k127_1002257_3 Low-potential electron donor to a number of redox enzymes K03839 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006879 277.0
CMS1_k127_1002257_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000504 273.0
CMS1_k127_1002257_5 Nitrogen fixation protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009922 227.0
CMS1_k127_1002257_6 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.000000000000000000000000000000000000000000000000000000000000000294 224.0
CMS1_k127_1002257_7 Nitrogen fixation protein NifW K02595 - - 0.0000000000000000000000000000000000000000000000000000000003296 203.0
CMS1_k127_1002257_8 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000003064 179.0
CMS1_k127_1002257_9 oxygen carrier activity - - - 0.00000000000000000000000000000003153 130.0
CMS1_k127_1005177_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 7.104e-291 919.0
CMS1_k127_1005177_1 Fatty acid cis/trans isomerase (CTI) - - - 9.702e-266 840.0
CMS1_k127_1005177_10 PFAM tRNA synthetase class II (G H P and S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 358.0
CMS1_k127_1005177_11 PFAM Ferredoxin thioredoxin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 305.0
CMS1_k127_1005177_12 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006047 271.0
CMS1_k127_1005177_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005803 256.0
CMS1_k127_1005177_14 protein conserved in bacteria K09804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001988 256.0
CMS1_k127_1005177_15 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000002133 258.0
CMS1_k127_1005177_16 molybdopterin converting factor K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000000002766 239.0
CMS1_k127_1005177_17 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000001653 239.0
CMS1_k127_1005177_18 COG2346 Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000004459 228.0
CMS1_k127_1005177_19 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000005742 214.0
CMS1_k127_1005177_2 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 9.678e-259 803.0
CMS1_k127_1005177_20 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000006304 208.0
CMS1_k127_1005177_21 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000009464 187.0
CMS1_k127_1005177_22 FixH - - - 0.00000000000000000000000000000000000000001763 159.0
CMS1_k127_1005177_23 PDP protein - - - 0.00000000000000000000000000000000000000003005 158.0
CMS1_k127_1005177_24 - - - - 0.0000000000000000000000000000000000000003339 157.0
CMS1_k127_1005177_25 molybdopterin converting factor K03636 - - 0.000000000000000000000000003364 111.0
CMS1_k127_1005177_26 diguanylate cyclase - - - 0.00000000000000000000006801 108.0
CMS1_k127_1005177_27 diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000001702 98.0
CMS1_k127_1005177_28 outer membrane porin, OprD family - - - 0.000000000000000004111 92.0
CMS1_k127_1005177_29 cytochrome c oxidase K00407 - - 0.0000000000000000577 82.0
CMS1_k127_1005177_3 COG3893 inactivated superfamily I helicase - - - 1.351e-222 714.0
CMS1_k127_1005177_30 Family of unknown function (DUF4006) - - - 0.000000000001958 69.0
CMS1_k127_1005177_31 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000002459 62.0
CMS1_k127_1005177_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.653e-220 688.0
CMS1_k127_1005177_5 Belongs to the CarA family K01956 - 6.3.5.5 2.426e-198 622.0
CMS1_k127_1005177_6 transporter - - - 6.522e-195 616.0
CMS1_k127_1005177_7 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 573.0
CMS1_k127_1005177_8 molybdopterin biosynthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 487.0
CMS1_k127_1005177_9 cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 381.0
CMS1_k127_1008890_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000006152 221.0
CMS1_k127_1008890_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000009548 147.0
CMS1_k127_1010123_0 Glycolate oxidase subunit K00104 - 1.1.3.15 9.209e-265 819.0
CMS1_k127_1010123_1 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 492.0
CMS1_k127_1010123_10 - - - - 0.000000000000006771 77.0
CMS1_k127_1010123_11 Protein of unknown function (DUF3568) - - - 0.00000007177 59.0
CMS1_k127_1010123_2 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 454.0
CMS1_k127_1010123_3 Dipeptidase K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 379.0
CMS1_k127_1010123_4 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 301.0
CMS1_k127_1010123_5 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003751 282.0
CMS1_k127_1010123_6 Nudix domain K08077 - 3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000001984 245.0
CMS1_k127_1010123_7 Formylmethanofuran dehydrogenase, subunit e - - - 0.000000000000000000000000000000000000000000000000000000000001772 214.0
CMS1_k127_1010123_8 Plasminogen-binding protein pgbA N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000005356 212.0
CMS1_k127_1010123_9 Competence protein K02238 - - 0.0000000000000000000000000000002291 128.0
CMS1_k127_1018528_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.0 1193.0
CMS1_k127_1018528_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 3.37e-280 867.0
CMS1_k127_1018528_10 abc transporter atp-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 335.0
CMS1_k127_1018528_11 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 343.0
CMS1_k127_1018528_12 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 337.0
CMS1_k127_1018528_13 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002327 284.0
CMS1_k127_1018528_14 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000009685 244.0
CMS1_k127_1018528_15 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000001498 210.0
CMS1_k127_1018528_16 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000004786 181.0
CMS1_k127_1018528_17 - - - - 0.0000000000000000000000000000000000003434 145.0
CMS1_k127_1018528_18 metal cluster binding - - - 0.000000000000000000000000000000771 126.0
CMS1_k127_1018528_19 PFAM beta-lactamase domain protein - - - 0.00000000001485 65.0
CMS1_k127_1018528_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 5.349e-234 736.0
CMS1_k127_1018528_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.006e-205 644.0
CMS1_k127_1018528_4 abc transporter atp-binding protein K06147,K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 602.0
CMS1_k127_1018528_5 ABC transporter K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 552.0
CMS1_k127_1018528_6 Arginosuccinate synthase K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 510.0
CMS1_k127_1018528_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 489.0
CMS1_k127_1018528_8 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 447.0
CMS1_k127_1018528_9 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 444.0
CMS1_k127_1046041_0 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K16881 - 2.7.7.13,5.4.2.8 0.0 1360.0
CMS1_k127_1046041_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1191.0
CMS1_k127_1046041_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1106.0
CMS1_k127_1046041_3 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0 1105.0
CMS1_k127_1046041_4 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 7.675e-310 954.0
CMS1_k127_1046041_5 PFAM phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 4.383e-303 934.0
CMS1_k127_1046041_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 5.611e-263 816.0
CMS1_k127_1046041_7 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 4.218e-198 632.0
CMS1_k127_1046041_8 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 479.0
CMS1_k127_1046041_9 PFAM Galactose-1-phosphate uridyl transferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000008069 216.0
CMS1_k127_1050532_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 471.0
CMS1_k127_1050532_1 abc transporter atp-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 349.0
CMS1_k127_1050532_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 342.0
CMS1_k127_1053500_0 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 415.0
CMS1_k127_1053500_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 372.0
CMS1_k127_1053500_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000275 206.0
CMS1_k127_1053500_3 COGs COG3786 conserved - - - 0.000000000000000000000000000000000000000000000000001358 191.0
CMS1_k127_1053500_4 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000004545 176.0
CMS1_k127_1053500_5 - - - - 0.00000005093 59.0
CMS1_k127_1060007_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1233.0
CMS1_k127_1060007_1 Histidine kinase - - - 0.0 1143.0
CMS1_k127_1060007_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001393 296.0
CMS1_k127_1060007_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K03776 - - 0.00000000000000000000000000000000000000000000000000000000002011 209.0
CMS1_k127_1060007_12 Response regulator receiver K07814 - - 0.0000000000000000000000000000000000000000000000009226 176.0
CMS1_k127_1060007_13 RDD family - - - 0.0000000000000000000000000000000000000000000004518 170.0
CMS1_k127_1060007_14 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000001667 158.0
CMS1_k127_1060007_15 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.0000000000000000000000000000000000002036 146.0
CMS1_k127_1060007_16 - - - - 0.00000000000000000000000000006484 121.0
CMS1_k127_1060007_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 3.196e-252 786.0
CMS1_k127_1060007_3 Belongs to the GARS family K01945 - 6.3.4.13 1.853e-227 709.0
CMS1_k127_1060007_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 2.319e-218 693.0
CMS1_k127_1060007_5 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 4.986e-218 684.0
CMS1_k127_1060007_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 7.039e-198 627.0
CMS1_k127_1060007_7 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 608.0
CMS1_k127_1060007_8 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006528 334.0
CMS1_k127_1060007_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 297.0
CMS1_k127_1083308_0 COG0474 Cation transport ATPase - - - 0.0 1193.0
CMS1_k127_1083308_1 RNA binding S1 domain protein K06959 - - 0.0 1037.0
CMS1_k127_1083308_10 Archaea bacterial proteins of unknown function K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 396.0
CMS1_k127_1083308_11 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 360.0
CMS1_k127_1083308_12 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 343.0
CMS1_k127_1083308_13 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 338.0
CMS1_k127_1083308_14 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 327.0
CMS1_k127_1083308_15 Pseudouridine synthase K06177,K06179,K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 323.0
CMS1_k127_1083308_16 COG0433 Predicted ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 321.0
CMS1_k127_1083308_17 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 320.0
CMS1_k127_1083308_18 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 311.0
CMS1_k127_1083308_19 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 309.0
CMS1_k127_1083308_2 STAS domain K03321 - - 1.006e-210 666.0
CMS1_k127_1083308_20 Belongs to the peptidase M48B family K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 304.0
CMS1_k127_1083308_21 YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 291.0
CMS1_k127_1083308_22 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 288.0
CMS1_k127_1083308_23 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007298 244.0
CMS1_k127_1083308_24 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009573 251.0
CMS1_k127_1083308_25 G T U mismatch-specific DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000001728 231.0
CMS1_k127_1083308_26 Evidence 4 Homologs of previously reported genes of K09700 - - 0.00000000000000000000000000000000000000000000000000000000000004945 216.0
CMS1_k127_1083308_27 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
CMS1_k127_1083308_28 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000001665 214.0
CMS1_k127_1083308_29 RNase H - - - 0.000000000000000000000000000000000000000000000000000000000008167 210.0
CMS1_k127_1083308_3 Glucose sorbosone - - - 1.472e-207 650.0
CMS1_k127_1083308_30 Cupin - - - 0.000000000000000000000000000000000000000000000000000000001525 201.0
CMS1_k127_1083308_31 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000004539 198.0
CMS1_k127_1083308_32 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000001014 177.0
CMS1_k127_1083308_33 - - - - 0.00000000000000000000000000000000000000002955 158.0
CMS1_k127_1083308_34 NlpC/P60 family K13695,K19303 - - 0.00000000000000000000000000000000000000004715 158.0
CMS1_k127_1083308_35 Nucleoside-specific channel-forming protein, Tsx - - - 0.000000000000000000000000000000000000001622 157.0
CMS1_k127_1083308_36 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000009567 136.0
CMS1_k127_1083308_38 - - - - 0.000000000000000000000000000000001565 133.0
CMS1_k127_1083308_39 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000001262 123.0
CMS1_k127_1083308_4 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 3.624e-206 650.0
CMS1_k127_1083308_42 Prokaryotic metallothionein K06950 - - 0.00000000005474 72.0
CMS1_k127_1083308_5 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 602.0
CMS1_k127_1083308_6 Epimerase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 491.0
CMS1_k127_1083308_7 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 481.0
CMS1_k127_1083308_8 Encapsulating protein for peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 454.0
CMS1_k127_1083308_9 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 419.0
CMS1_k127_1098130_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 574.0
CMS1_k127_1098130_1 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 384.0
CMS1_k127_1098130_2 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001913 259.0
CMS1_k127_1103137_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1579.0
CMS1_k127_1103137_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 1.246e-261 811.0
CMS1_k127_1103137_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 610.0
CMS1_k127_1103137_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 407.0
CMS1_k127_1103137_4 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 367.0
CMS1_k127_1103137_5 TIGRFAM cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 287.0
CMS1_k127_1103137_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000319 166.0
CMS1_k127_1103137_7 Diguanylate cyclase - - - 0.00000000000000000000000001787 110.0
CMS1_k127_112449_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 3.454e-203 650.0
CMS1_k127_112449_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 348.0
CMS1_k127_112449_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007794 248.0
CMS1_k127_112449_3 - - - - 0.00000000000000000000000000000000000000000000000000000000002877 209.0
CMS1_k127_112449_4 - - - - 0.0000000000000000000000000005167 120.0
CMS1_k127_1240476_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 317.0
CMS1_k127_1240476_1 COG1393 Arsenate reductase and related K00537 - 1.20.4.1 0.00000000000000000000000000000000003218 138.0
CMS1_k127_1240476_2 Protein of unknown function (DUF465) K09794 - - 0.000000000000000000000000000000001655 130.0
CMS1_k127_1240476_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000005816 125.0
CMS1_k127_1240476_4 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000002913 63.0
CMS1_k127_1257532_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.829e-235 734.0
CMS1_k127_1257532_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0003674,GO:0005488,GO:0005515,GO:0042802 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 386.0
CMS1_k127_1257532_2 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 371.0
CMS1_k127_1257532_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000009025 235.0
CMS1_k127_1311468_0 glutamine synthetase K01915 - 6.3.1.2 8.828e-302 927.0
CMS1_k127_1311468_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 7.605e-232 731.0
CMS1_k127_1311468_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002027 280.0
CMS1_k127_1311468_11 that it carries out the mismatch recognition step. This protein has a weak ATPase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001412 280.0
CMS1_k127_1311468_12 that it carries out the mismatch recognition step. This protein has a weak ATPase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001151 224.0
CMS1_k127_1311468_13 C-C_Bond_Lyase of the TIM-Barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000001656 216.0
CMS1_k127_1311468_14 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000004468 207.0
CMS1_k127_1311468_15 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000004524 209.0
CMS1_k127_1311468_16 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000006313 195.0
CMS1_k127_1311468_17 Protein of unknown function (DUF3972) - - - 0.00000000000000000000000000000000000000000000000000001184 195.0
CMS1_k127_1311468_18 PFAM AMMECR1 domain protein K09141 - - 0.000000000000000000000000000000000000000000008194 168.0
CMS1_k127_1311468_19 GAF domain - - - 0.00000000000000000000000000000000000003887 146.0
CMS1_k127_1311468_2 peptidase U32 family K08303 - - 1.466e-221 692.0
CMS1_k127_1311468_20 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000002039 139.0
CMS1_k127_1311468_21 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000002171 140.0
CMS1_k127_1311468_22 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000002257 132.0
CMS1_k127_1311468_3 Protein of unknown function (DUF1538) - - - 1.103e-207 657.0
CMS1_k127_1311468_4 histidinol phosphate phosphatase K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 389.0
CMS1_k127_1311468_5 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 362.0
CMS1_k127_1311468_6 COG0642 Signal transduction histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 331.0
CMS1_k127_1311468_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 281.0
CMS1_k127_1311468_9 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001319 288.0
CMS1_k127_1323812_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1128.0
CMS1_k127_1323812_1 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 582.0
CMS1_k127_1323812_10 DnaJ domain protein K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 295.0
CMS1_k127_1323812_11 Double sensory domain of two-component sensor kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003292 284.0
CMS1_k127_1323812_12 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000004792 249.0
CMS1_k127_1323812_13 Hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000005313 188.0
CMS1_k127_1323812_14 diguanylate cyclase K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000017 186.0
CMS1_k127_1323812_15 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000001487 124.0
CMS1_k127_1323812_17 deoxyribonuclease I activity K01150 - 3.1.21.1 0.0000000000000000000003187 106.0
CMS1_k127_1323812_18 EF hand - - - 0.000000000005396 69.0
CMS1_k127_1323812_2 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 507.0
CMS1_k127_1323812_20 EF hand - - - 0.0000003344 55.0
CMS1_k127_1323812_3 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 457.0
CMS1_k127_1323812_4 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 429.0
CMS1_k127_1323812_5 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008678 438.0
CMS1_k127_1323812_6 S1 domain K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 332.0
CMS1_k127_1323812_7 protein involved in response to NO K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 329.0
CMS1_k127_1323812_8 Outer membrane protein beta-barrel family K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 329.0
CMS1_k127_1323812_9 PFAM Archaea bacterial proteins of K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 304.0
CMS1_k127_1327271_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1242.0
CMS1_k127_1327271_1 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 413.0
CMS1_k127_1327271_2 - - - - 0.0001422 45.0
CMS1_k127_1348857_0 transporter K14445 - - 1.057e-201 638.0
CMS1_k127_1348857_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.517e-201 634.0
CMS1_k127_1348857_10 4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000005198 90.0
CMS1_k127_1348857_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 516.0
CMS1_k127_1348857_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 337.0
CMS1_k127_1348857_4 of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000009816 199.0
CMS1_k127_1348857_5 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000005124 162.0
CMS1_k127_1348857_6 - - - - 0.000000000000000000000000000000000000000004859 161.0
CMS1_k127_1348857_7 Nitrogen fixation protein NifU - - - 0.0000000000000000000000000000000000000000444 153.0
CMS1_k127_1348857_8 Protein of unknown function (DUF2628) - - - 0.00000000000000000000000000000004087 131.0
CMS1_k127_1348857_9 Protein of unknown function (DUF2628) - - - 0.000000000000000000000000002664 118.0
CMS1_k127_1432646_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 6.606e-199 626.0
CMS1_k127_1432646_1 ABC transporter, ATP-binding protein K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000551 247.0
CMS1_k127_1432646_2 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000001108 191.0
CMS1_k127_1432646_3 Ankyrin repeats (3 copies) - - - 0.0000000000000000000000000000000000002034 147.0
CMS1_k127_1506144_0 - - - - 0.0 1249.0
CMS1_k127_1506144_1 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 349.0
CMS1_k127_1506144_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 318.0
CMS1_k127_1506144_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001291 242.0
CMS1_k127_1538597_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.576e-291 904.0
CMS1_k127_1538597_1 flagellar motor switch protein K02410 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 522.0
CMS1_k127_1538597_2 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 355.0
CMS1_k127_1538597_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 280.0
CMS1_k127_1538597_4 flagellar assembly protein FliH K02411 - - 0.00000000000000000000000000000000000000000000000000000000004548 214.0
CMS1_k127_1538597_5 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000005331 143.0
CMS1_k127_162868_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 7.473e-245 758.0
CMS1_k127_162868_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 1.816e-201 631.0
CMS1_k127_162868_10 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000005008 101.0
CMS1_k127_162868_11 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000002104 74.0
CMS1_k127_162868_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 469.0
CMS1_k127_162868_3 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 428.0
CMS1_k127_162868_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 373.0
CMS1_k127_162868_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 286.0
CMS1_k127_162868_6 cAMP phosphodiesterases class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009498 270.0
CMS1_k127_162868_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002735 240.0
CMS1_k127_162868_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005785 239.0
CMS1_k127_162868_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000001188 194.0
CMS1_k127_1754825_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 501.0
CMS1_k127_1754825_1 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000029 249.0
CMS1_k127_1754825_2 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000001033 209.0
CMS1_k127_1754825_3 competence protein K02237 - - 0.00000000000000009603 82.0
CMS1_k127_1777847_0 chemotaxis protein K03407 - 2.7.13.3 5.157e-241 768.0
CMS1_k127_1777847_1 alanine symporter K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 581.0
CMS1_k127_1777847_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002474 254.0
CMS1_k127_1777847_11 chemotaxis protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004337 240.0
CMS1_k127_1777847_12 protein conserved in bacteria K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000001016 235.0
CMS1_k127_1777847_13 PFAM AhpC TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000003028 243.0
CMS1_k127_1777847_14 - - - - 0.0000000000000000000000000000000000000002566 151.0
CMS1_k127_1777847_15 chemotaxis protein K03406 - - 0.0000000000000000000000000007599 126.0
CMS1_k127_1777847_17 - - - - 0.0008302 46.0
CMS1_k127_1777847_2 chemotaxis protein K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 477.0
CMS1_k127_1777847_3 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 459.0
CMS1_k127_1777847_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 460.0
CMS1_k127_1777847_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 381.0
CMS1_k127_1777847_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 360.0
CMS1_k127_1777847_7 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 354.0
CMS1_k127_1777847_8 involved in molybdopterin and thiamine biosynthesis family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 308.0
CMS1_k127_1777847_9 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 297.0
CMS1_k127_1807816_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 1915.0
CMS1_k127_1807816_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000367 241.0
CMS1_k127_1807816_2 Thioredoxin-like domain K03981 - 5.3.4.1 0.00000000000000000000000000000000000000001968 161.0
CMS1_k127_1807816_3 4Fe-4S binding domain - - - 0.0000000000000000000000000001193 116.0
CMS1_k127_182289_0 ATP-dependent CLP protease ATP-binding subunit K03694 - - 0.0 1028.0
CMS1_k127_182289_1 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 621.0
CMS1_k127_182289_10 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001471 263.0
CMS1_k127_182289_11 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000007636 253.0
CMS1_k127_182289_12 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000003193 241.0
CMS1_k127_182289_13 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000000000000000000000000000000000000001954 226.0
CMS1_k127_182289_14 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.000000000000000000000000000000000000000000000000000000000002548 215.0
CMS1_k127_182289_15 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000001699 146.0
CMS1_k127_182289_2 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 606.0
CMS1_k127_182289_3 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 601.0
CMS1_k127_182289_4 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 470.0
CMS1_k127_182289_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 452.0
CMS1_k127_182289_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 402.0
CMS1_k127_182289_7 component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 393.0
CMS1_k127_182289_8 permease K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 376.0
CMS1_k127_182289_9 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 287.0
CMS1_k127_1833863_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 2020.0
CMS1_k127_1833863_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1047.0
CMS1_k127_1833863_10 Histidine kinase K20972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 503.0
CMS1_k127_1833863_11 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 482.0
CMS1_k127_1833863_12 PFAM Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 454.0
CMS1_k127_1833863_13 4Fe-4S ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 433.0
CMS1_k127_1833863_14 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 435.0
CMS1_k127_1833863_15 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 431.0
CMS1_k127_1833863_16 PFAM 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 411.0
CMS1_k127_1833863_17 peptidylprolyl isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 310.0
CMS1_k127_1833863_18 component of anaerobic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 292.0
CMS1_k127_1833863_19 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 290.0
CMS1_k127_1833863_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 2.32e-272 841.0
CMS1_k127_1833863_20 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001956 273.0
CMS1_k127_1833863_21 - - - - 0.00000000000000000000000000000000000000000000000000008251 190.0
CMS1_k127_1833863_22 Heme iron utilization protein K07226 - - 0.000000000000000000000000000000000000000000000000009408 184.0
CMS1_k127_1833863_23 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000005685 179.0
CMS1_k127_1833863_24 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000005858 173.0
CMS1_k127_1833863_25 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000007076 168.0
CMS1_k127_1833863_26 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) - - - 0.000000000000000000000000000000000000103 153.0
CMS1_k127_1833863_27 Membrane - - - 0.000000000000000000000004235 108.0
CMS1_k127_1833863_28 PFAM Cupin domain K11312 - - 0.000000000000000001321 89.0
CMS1_k127_1833863_29 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000004258 67.0
CMS1_k127_1833863_3 COG0642 Signal transduction histidine kinase - - - 1.143e-232 737.0
CMS1_k127_1833863_30 Glutaredoxin - - - 0.00000819 53.0
CMS1_k127_1833863_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 2.558e-223 697.0
CMS1_k127_1833863_5 COG1070 Sugar (pentulose and hexulose) K11216 - 2.7.1.189 6.853e-217 684.0
CMS1_k127_1833863_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 5.621e-212 662.0
CMS1_k127_1833863_7 fructose-bisphosphate aldolase K01624 - 4.1.2.13 1.351e-199 625.0
CMS1_k127_1833863_8 phosphorylase kinase alphabeta K07190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 603.0
CMS1_k127_1833863_9 sulfate adenylyltransferase K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 582.0
CMS1_k127_185715_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1130.0
CMS1_k127_185715_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.518e-289 896.0
CMS1_k127_185715_2 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.083e-264 829.0
CMS1_k127_185715_3 8-amino-7-oxononanoate synthase K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 459.0
CMS1_k127_185715_4 abc transporter atp-binding protein K02031,K15587 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 313.0
CMS1_k127_185715_5 nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004905 256.0
CMS1_k127_185715_6 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000002225 228.0
CMS1_k127_185715_7 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000007152 214.0
CMS1_k127_185715_9 integral membrane protein - - - 0.00000000000000000000000000000005533 132.0
CMS1_k127_1878005_0 Aminotransferase K14261 - - 4.145e-228 710.0
CMS1_k127_1878005_1 homoserine dehydrogenase K00003 - 1.1.1.3 2.633e-197 621.0
CMS1_k127_1878005_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006173 278.0
CMS1_k127_1878005_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000001001 130.0
CMS1_k127_1878005_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000001445 109.0
CMS1_k127_1878005_5 Protein conserved in bacteria - - - 0.00000000002265 74.0
CMS1_k127_1882420_0 diguanylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003551 288.0
CMS1_k127_1882420_1 Esterase-like activity of phytase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000129 255.0
CMS1_k127_1882420_2 Rhodanese-like domain - - - 0.0000000000000000000000000000000000002251 144.0
CMS1_k127_1882420_4 META domain - - - 0.0000000000001424 76.0
CMS1_k127_1885656_0 Belongs to the ClpA ClpB family K03694,K03695 - - 0.0 1302.0
CMS1_k127_1885656_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 587.0
CMS1_k127_1885656_10 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000001474 116.0
CMS1_k127_1885656_11 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000007388 100.0
CMS1_k127_1885656_12 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.0000000000000145 75.0
CMS1_k127_1885656_13 PFAM Prenyltransferase squalene oxidase - - - 0.0000001064 63.0
CMS1_k127_1885656_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 418.0
CMS1_k127_1885656_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 371.0
CMS1_k127_1885656_4 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 280.0
CMS1_k127_1885656_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004814 259.0
CMS1_k127_1885656_6 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000002691 218.0
CMS1_k127_1885656_7 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000007969 165.0
CMS1_k127_1885656_8 - - - - 0.000000000000000000000000000000000009123 138.0
CMS1_k127_1891895_0 - K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 505.0
CMS1_k127_1891895_1 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001583 274.0
CMS1_k127_1891895_2 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000127 252.0
CMS1_k127_1891895_3 Protein required for attachment to host cells - - - 0.0000000000000000000000000000000000000000000333 166.0
CMS1_k127_1891895_5 META domain K09914 - - 0.000000000000001167 82.0
CMS1_k127_1916300_0 Na Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 600.0
CMS1_k127_1916300_1 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 448.0
CMS1_k127_1916300_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02303,K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 399.0
CMS1_k127_1916300_3 Glycosyl transferase family, helical bundle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 393.0
CMS1_k127_1916300_4 COG1648 Siroheme synthase (precorrin-2 oxidase ferrochelatase domain) K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003413 279.0
CMS1_k127_1916300_5 mannosylglycerate metabolic process K05947,K07026,K15918 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000002986 248.0
CMS1_k127_1921011_0 Mitochondrial degradasome RNA helicase subunit C terminal K17675 - 3.6.4.13 2.24e-241 766.0
CMS1_k127_1921011_1 chemotaxis protein - - - 3.897e-197 634.0
CMS1_k127_1921011_2 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 398.0
CMS1_k127_1921011_3 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000003361 221.0
CMS1_k127_1921011_4 fumarate reductase, iron-sulfur protein K00245 - 1.3.5.4 0.00000000000000000000000000575 111.0
CMS1_k127_1921011_5 - - - - 0.00000000000000003435 89.0
CMS1_k127_1925195_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1153.0
CMS1_k127_1925195_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 9.606e-291 898.0
CMS1_k127_1925195_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000552 104.0
CMS1_k127_1925195_2 dinuclear metal center protein, YbgI K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 364.0
CMS1_k127_1925195_3 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 325.0
CMS1_k127_1925195_4 membrane-associated protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000757 246.0
CMS1_k127_1925195_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000004424 232.0
CMS1_k127_1925195_6 COG1579 Zn-ribbon protein possibly nucleic acid-binding K07164,K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000004631 203.0
CMS1_k127_1925195_7 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000321 212.0
CMS1_k127_1925195_8 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000000000000000000001708 166.0
CMS1_k127_1925195_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000009275 149.0
CMS1_k127_1937994_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.459e-235 735.0
CMS1_k127_1937994_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 6.206e-199 630.0
CMS1_k127_1937994_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 580.0
CMS1_k127_1937994_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000004701 173.0
CMS1_k127_1951889_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 454.0
CMS1_k127_1951889_1 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008207 370.0
CMS1_k127_1951889_2 Radical SAM protein K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000003806 230.0
CMS1_k127_1951889_3 Protein of unknown function (DUF2393) - - - 0.00000000000000000000000000000000000000000000002026 176.0
CMS1_k127_1951889_4 Protein of unknown function (DUF2393) - - - 0.00000000000000000000000000000000009238 139.0
CMS1_k127_2039551_0 pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 7.979e-195 618.0
CMS1_k127_2039551_1 Single-stranded-DNA-specific exonuclease (RecJ) K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 351.0
CMS1_k127_2039551_2 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.000000000000000000000000000000000000000000000001818 175.0
CMS1_k127_2039551_3 Ester cyclase - - - 0.0000000000000000000000000000000000000000005887 160.0
CMS1_k127_2084281_0 prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 356.0
CMS1_k127_2084281_1 Transcriptional regulator, LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001059 255.0
CMS1_k127_2084281_2 Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein K07147 - - 0.0000000000000000000000000000000000000000001979 161.0
CMS1_k127_2103385_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.67e-310 956.0
CMS1_k127_2103385_1 Single-stranded-DNA-specific exonuclease (RecJ) K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 362.0
CMS1_k127_2103385_2 glutathione-regulated potassium-efflux system protein K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 252.0
CMS1_k127_2165626_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.877e-321 990.0
CMS1_k127_2165626_1 hydrogenase (NiFe) small subunit HydA K05927 - 1.12.5.1 1.436e-317 984.0
CMS1_k127_2165626_2 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008565 561.0
CMS1_k127_2165626_3 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 514.0
CMS1_k127_2165626_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 498.0
CMS1_k127_2165626_5 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 466.0
CMS1_k127_2165626_6 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 295.0
CMS1_k127_2165626_7 Phosphopantetheine attachment site - - - 0.000000000000000000000003718 104.0
CMS1_k127_2165626_8 - - - - 0.00000000003003 72.0
CMS1_k127_21791_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.623e-210 662.0
CMS1_k127_21791_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 325.0
CMS1_k127_21791_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000002202 188.0
CMS1_k127_21791_3 Ribosomal protein L19 K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000006372 134.0
CMS1_k127_21791_4 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000008587 131.0
CMS1_k127_21791_5 RNA-binding protein K06960 - - 0.00000000000000000000000000000009006 125.0
CMS1_k127_21791_6 General glycosylation pathway protein - - - 0.00000000000000000002421 93.0
CMS1_k127_2196759_0 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 329.0
CMS1_k127_2196759_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001479 244.0
CMS1_k127_2215832_0 sulfur dehydrogenase subunit K17225 - - 3.685e-233 727.0
CMS1_k127_2215832_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 453.0
CMS1_k127_2215832_10 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000000000000000003262 200.0
CMS1_k127_2215832_11 - K17226 - - 0.000000000000000000000000000000000000000000001659 169.0
CMS1_k127_2215832_12 oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000000001038 164.0
CMS1_k127_2215832_13 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000001271 158.0
CMS1_k127_2215832_14 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000006293 136.0
CMS1_k127_2215832_15 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000426 116.0
CMS1_k127_2215832_17 Thioredoxin-like domain - - - 0.00000000000000000000000316 108.0
CMS1_k127_2215832_18 sh3 domain protein - - - 0.000000005111 62.0
CMS1_k127_2215832_2 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 390.0
CMS1_k127_2215832_3 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 374.0
CMS1_k127_2215832_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009292 344.0
CMS1_k127_2215832_5 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 328.0
CMS1_k127_2215832_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
CMS1_k127_2215832_7 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003517 247.0
CMS1_k127_2215832_8 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004242 243.0
CMS1_k127_2215832_9 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
CMS1_k127_226755_0 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 309.0
CMS1_k127_226755_1 the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 286.0
CMS1_k127_2280867_0 Putative diguanylate phosphodiesterase - - - 4.75e-283 881.0
CMS1_k127_2280867_1 Heat shock 70 kDa protein K04043 - - 3.028e-270 843.0
CMS1_k127_2280867_2 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 522.0
CMS1_k127_2280867_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 506.0
CMS1_k127_2280867_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 415.0
CMS1_k127_2280867_5 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 313.0
CMS1_k127_2280867_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000001045 205.0
CMS1_k127_2282658_0 Abc transporter K06158 - - 1.896e-296 919.0
CMS1_k127_2282658_1 chemotaxis protein K03406 - - 4.739e-208 659.0
CMS1_k127_2282658_2 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 316.0
CMS1_k127_2282658_3 COG1734 DnaK suppressor protein K06204 - - 0.0000000000000000000000000000000000000324 147.0
CMS1_k127_2282658_4 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.0000000000000000000000000000000000009384 145.0
CMS1_k127_2282658_5 Membrane protease subunits - - - 0.00000000000000000000000000000004439 126.0
CMS1_k127_2282658_6 - - - - 0.000000000000000000000000000001517 122.0
CMS1_k127_2282658_7 - - - - 0.000000000000782 74.0
CMS1_k127_2301962_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 8.404e-225 702.0
CMS1_k127_2301962_1 Cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009646 580.0
CMS1_k127_2301962_10 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 309.0
CMS1_k127_2301962_11 Serine hydrolase K07002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 284.0
CMS1_k127_2301962_12 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000006289 222.0
CMS1_k127_2301962_13 - - - - 0.000000000000000000000000000000000000000000000000000000000002752 211.0
CMS1_k127_2301962_14 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000000000000000000000002986 202.0
CMS1_k127_2301962_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000003327 170.0
CMS1_k127_2301962_16 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000000004052 144.0
CMS1_k127_2301962_17 Signal transduction protein - - - 0.000000000000000000000000000000003602 146.0
CMS1_k127_2301962_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 548.0
CMS1_k127_2301962_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 547.0
CMS1_k127_2301962_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0005488,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 546.0
CMS1_k127_2301962_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 508.0
CMS1_k127_2301962_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 483.0
CMS1_k127_2301962_7 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 361.0
CMS1_k127_2301962_8 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 332.0
CMS1_k127_2301962_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 313.0
CMS1_k127_2376459_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 488.0
CMS1_k127_2509783_0 DNA polymerase X family K02347 - - 1.99e-204 651.0
CMS1_k127_2509783_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008315 392.0
CMS1_k127_2509783_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 289.0
CMS1_k127_2509783_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001643 263.0
CMS1_k127_2509783_4 Universal stress protein family - - - 0.0000002869 55.0
CMS1_k127_2509783_5 mechanosensitive ion channel - - - 0.000005945 49.0
CMS1_k127_260183_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 4.291e-307 955.0
CMS1_k127_260183_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 578.0
CMS1_k127_260183_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 556.0
CMS1_k127_260183_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 347.0
CMS1_k127_260183_4 - - - - 0.00000000000000000000005642 101.0
CMS1_k127_260183_5 HD domain - - - 0.000000000008959 68.0
CMS1_k127_261884_0 chemotaxis protein K03406 - - 5.628e-238 755.0
CMS1_k127_261884_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.218e-222 695.0
CMS1_k127_261884_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001243 248.0
CMS1_k127_261884_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000006291 217.0
CMS1_k127_261884_12 PFAM Fimbrial assembly family protein - - - 0.0000000000000000000000000000000000000000000000000000417 192.0
CMS1_k127_261884_13 Cupin domain - - - 0.00000000000000000000000000000000000000000000000008845 183.0
CMS1_k127_261884_14 - - - - 0.000000000000000000000000000000000000000000001437 170.0
CMS1_k127_261884_15 Belongs to the glucose-6-phosphate 1-epimerase family K01792 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 5.1.3.15 0.0000000000000000000000000000000000000000002498 162.0
CMS1_k127_261884_16 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000000007449 135.0
CMS1_k127_261884_17 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000004933 129.0
CMS1_k127_261884_18 - - - - 0.0000000000000000000000000004604 115.0
CMS1_k127_261884_19 - - - - 0.000000000000000000000004107 104.0
CMS1_k127_261884_2 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 519.0
CMS1_k127_261884_20 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000000001186 101.0
CMS1_k127_261884_3 ABC transporter permease K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008407 461.0
CMS1_k127_261884_4 DbpA RNA binding domain K05591 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 440.0
CMS1_k127_261884_6 Belongs to the 'phage' integrase family K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 335.0
CMS1_k127_261884_7 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006462 275.0
CMS1_k127_261884_8 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
CMS1_k127_261884_9 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000007808 241.0
CMS1_k127_265929_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.271e-246 770.0
CMS1_k127_265929_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 530.0
CMS1_k127_265929_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 307.0
CMS1_k127_265929_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000007276 183.0
CMS1_k127_265929_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000003639 168.0
CMS1_k127_265929_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000006128 151.0
CMS1_k127_265929_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000005438 91.0
CMS1_k127_265929_7 RESPONSE REGULATOR receiver K07288 - - 0.00007456 54.0
CMS1_k127_2700244_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1081.0
CMS1_k127_2700244_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 5.062e-309 972.0
CMS1_k127_2700244_10 abc transporter atp-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 354.0
CMS1_k127_2700244_11 Belongs to the protein N5-glutamine methyltransferase family K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 296.0
CMS1_k127_2700244_12 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000231 249.0
CMS1_k127_2700244_13 Protein of unknown function (DUF2459) - - - 0.000000000000000000000000000000000000000000000000000000000001674 216.0
CMS1_k127_2700244_14 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000003996 181.0
CMS1_k127_2700244_15 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000001958 131.0
CMS1_k127_2700244_16 membrane - - - 0.00000000000000000000000000000002948 131.0
CMS1_k127_2700244_19 Copper resistance K07233 - - 0.0000000000000002336 79.0
CMS1_k127_2700244_2 ABC transporter, ATP-binding protein K15738 - - 1.793e-291 907.0
CMS1_k127_2700244_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 9.292e-222 695.0
CMS1_k127_2700244_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 4.233e-219 685.0
CMS1_k127_2700244_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 537.0
CMS1_k127_2700244_6 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 535.0
CMS1_k127_2700244_7 Mate efflux family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 446.0
CMS1_k127_2700244_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 416.0
CMS1_k127_2700244_9 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 417.0
CMS1_k127_2716712_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1357.0
CMS1_k127_2716712_1 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 549.0
CMS1_k127_2716712_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 527.0
CMS1_k127_2716712_3 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007583 355.0
CMS1_k127_2716712_4 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000000000000003476 198.0
CMS1_k127_2716712_5 (Lipo)protein K09860 - - 0.0000000000000000000000000000000001373 139.0
CMS1_k127_2716712_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000001533 76.0
CMS1_k127_2716712_7 - - - - 0.0000003835 57.0
CMS1_k127_2717524_0 PFAM biotin lipoyl attachment domain-containing protein K01960 - 6.4.1.1 0.0 1003.0
CMS1_k127_2717524_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 8.816e-243 752.0
CMS1_k127_2717524_10 Fibronectin type 3 domain-containing protein K06882 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 409.0
CMS1_k127_2717524_11 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 404.0
CMS1_k127_2717524_12 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 375.0
CMS1_k127_2717524_13 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 376.0
CMS1_k127_2717524_14 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 347.0
CMS1_k127_2717524_15 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 332.0
CMS1_k127_2717524_16 Domain of unknown function (DUF1882) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 331.0
CMS1_k127_2717524_17 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008722 314.0
CMS1_k127_2717524_18 Amino Acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
CMS1_k127_2717524_19 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003565 277.0
CMS1_k127_2717524_2 COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit K01572 - 4.1.1.3 1.505e-219 687.0
CMS1_k127_2717524_20 peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000568 254.0
CMS1_k127_2717524_21 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000538 222.0
CMS1_k127_2717524_22 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000000000000000007366 209.0
CMS1_k127_2717524_23 Cell division protein K03591,K03749 - - 0.00000000000000000000000000000000000000000000000273 181.0
CMS1_k127_2717524_24 Cell division protein FtsX K09811 - - 0.000000000000000000000000000000000000006599 156.0
CMS1_k127_2717524_25 - - - - 0.00000000000000000000000000000000000007409 143.0
CMS1_k127_2717524_27 - - - - 0.0000000000000000000000001448 109.0
CMS1_k127_2717524_28 - - - - 0.00000000000000002689 87.0
CMS1_k127_2717524_29 Oxaloacetate decarboxylase, gamma chain K01573 - 4.1.1.3 0.000000000000002444 79.0
CMS1_k127_2717524_3 anthranilate synthase component K01657 - 4.1.3.27 1.955e-219 688.0
CMS1_k127_2717524_30 FlaG protein K06603 - - 0.000000000000009605 77.0
CMS1_k127_2717524_32 - - - - 0.00000000001387 72.0
CMS1_k127_2717524_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 574.0
CMS1_k127_2717524_5 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 516.0
CMS1_k127_2717524_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 436.0
CMS1_k127_2717524_7 na -driven multidrug efflux - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 430.0
CMS1_k127_2717524_8 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 422.0
CMS1_k127_2717524_9 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 409.0
CMS1_k127_2739438_0 ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 429.0
CMS1_k127_2739438_1 NnrU protein K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009755 400.0
CMS1_k127_2739438_2 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 339.0
CMS1_k127_2739438_3 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009405 271.0
CMS1_k127_2739438_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000002409 246.0
CMS1_k127_2739438_5 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000001082 220.0
CMS1_k127_2739438_6 -acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000005157 205.0
CMS1_k127_2739438_8 Protein of unknown function (DUF504) - - - 0.00000000000000000000001163 103.0
CMS1_k127_2739438_9 Domain of unknown function (DUF4136) - - - 0.00000000000000002784 89.0
CMS1_k127_2748852_0 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 439.0
CMS1_k127_2748852_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 349.0
CMS1_k127_2748852_2 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000001886 237.0
CMS1_k127_2748852_3 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00001148 48.0
CMS1_k127_2752166_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 3.618e-236 736.0
CMS1_k127_2752166_1 Glycoside-hydrolase family GH114 K21006 - - 5.695e-223 721.0
CMS1_k127_2752166_10 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000001482 226.0
CMS1_k127_2752166_11 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000000000000000000009118 216.0
CMS1_k127_2752166_12 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000008135 205.0
CMS1_k127_2752166_13 PelD GGDEF domain K21009 - - 0.0000000000000000000000000000000000000000000000000001042 201.0
CMS1_k127_2752166_14 ArsC family - - - 0.0000000000000000000000000000000000000005858 151.0
CMS1_k127_2752166_15 - - - - 0.0000000000000000000000000000000000000008546 156.0
CMS1_k127_2752166_16 - - - - 0.00000000000000000000000000000006671 127.0
CMS1_k127_2752166_17 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000004865 125.0
CMS1_k127_2752166_18 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000533 119.0
CMS1_k127_2752166_19 cAMP biosynthetic process K21008 - - 0.000000000000000000000000001303 118.0
CMS1_k127_2752166_2 glycosyl transferase group 1 K21011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 595.0
CMS1_k127_2752166_20 membrane K21012 - - 0.000000000000000000000000001813 127.0
CMS1_k127_2752166_21 chaperone-mediated protein folding K21010 - - 0.00000000000000000008544 101.0
CMS1_k127_2752166_22 - - - - 0.0000000000000579 83.0
CMS1_k127_2752166_3 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 583.0
CMS1_k127_2752166_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 429.0
CMS1_k127_2752166_5 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 363.0
CMS1_k127_2752166_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 349.0
CMS1_k127_2752166_7 Tetratricopeptide repeat K21007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006668 315.0
CMS1_k127_2752166_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004341 280.0
CMS1_k127_2752166_9 Belongs to the Fur family K03711 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 250.0
CMS1_k127_2759409_0 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 608.0
CMS1_k127_2759409_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 302.0
CMS1_k127_2759409_2 Potassium channel protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 295.0
CMS1_k127_2759409_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000002168 112.0
CMS1_k127_2761434_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 3.354e-312 992.0
CMS1_k127_2761434_1 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000002869 153.0
CMS1_k127_2761434_2 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000007035 57.0
CMS1_k127_2780228_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 435.0
CMS1_k127_2780228_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 336.0
CMS1_k127_2780228_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 290.0
CMS1_k127_2780228_3 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000001871 109.0
CMS1_k127_2788698_0 Belongs to the UbiD family K03182 - 4.1.1.98 7.643e-300 928.0
CMS1_k127_2788698_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.441e-261 816.0
CMS1_k127_2788698_10 - - - - 0.00000000000000000000000000000000002431 143.0
CMS1_k127_2788698_11 - - - - 0.00000000000000000000000000000000007609 136.0
CMS1_k127_2788698_12 Domain of unknown function (DUF2018) - - - 0.00000000000000000000007406 101.0
CMS1_k127_2788698_13 - - - - 0.0000000000000000001012 93.0
CMS1_k127_2788698_2 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 610.0
CMS1_k127_2788698_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 477.0
CMS1_k127_2788698_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 417.0
CMS1_k127_2788698_5 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 393.0
CMS1_k127_2788698_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 336.0
CMS1_k127_2788698_7 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 311.0
CMS1_k127_2788698_8 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 293.0
CMS1_k127_2788698_9 Domain of unknown function (DUF386) - - - 0.00000000000000000000000000000000000000000000000000000008739 201.0
CMS1_k127_2795535_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1117.0
CMS1_k127_2795535_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.639e-254 794.0
CMS1_k127_2795535_2 Pyridine nucleotide-disulfide oxidoreductase K05910 - 1.11.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 558.0
CMS1_k127_2795535_3 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 512.0
CMS1_k127_2795535_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 366.0
CMS1_k127_2795535_5 Membrane protease subunits - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 361.0
CMS1_k127_2795535_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 327.0
CMS1_k127_2795535_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 302.0
CMS1_k127_2795535_8 membrane - - - 0.000000000000000000000003755 104.0
CMS1_k127_2798382_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 605.0
CMS1_k127_2798382_1 COG1252 NADH dehydrogenase FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 572.0
CMS1_k127_2798660_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 7.657e-295 912.0
CMS1_k127_2798660_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 501.0
CMS1_k127_2798660_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 415.0
CMS1_k127_2798660_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 411.0
CMS1_k127_2798660_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000002014 200.0
CMS1_k127_2798660_5 - - - - 0.000000000000000000000000000000000000000000000000003057 185.0
CMS1_k127_2798660_6 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000001433 121.0
CMS1_k127_2805394_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1260.0
CMS1_k127_2805394_1 Radical SAM - - - 8.661e-227 712.0
CMS1_k127_2805394_10 Jag_N K06346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009058 283.0
CMS1_k127_2805394_11 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000104 259.0
CMS1_k127_2805394_12 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K18284 - 3.2.2.30,3.2.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 257.0
CMS1_k127_2805394_13 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005713 253.0
CMS1_k127_2805394_14 Dtw domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007957 248.0
CMS1_k127_2805394_15 COG1881 Phospholipid-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000195 245.0
CMS1_k127_2805394_16 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006287 243.0
CMS1_k127_2805394_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
CMS1_k127_2805394_18 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000007434 226.0
CMS1_k127_2805394_19 hmm pf01205 - - - 0.00000000000000000000000000000000000000000000000000000000000001369 222.0
CMS1_k127_2805394_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 3.391e-206 654.0
CMS1_k127_2805394_20 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000007019 216.0
CMS1_k127_2805394_21 peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001062 208.0
CMS1_k127_2805394_22 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000269 207.0
CMS1_k127_2805394_23 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000000009698 175.0
CMS1_k127_2805394_24 - - - - 0.00000000000000000000000000000000000000000000006762 183.0
CMS1_k127_2805394_25 Could be involved in insertion of integral membrane proteins into the membrane - - - 0.000000000000000000000000000000000000009459 147.0
CMS1_k127_2805394_26 - - - - 0.0000000000000000000000000000000000007778 143.0
CMS1_k127_2805394_27 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000000001242 138.0
CMS1_k127_2805394_28 - - - - 0.00000000000000000000000000000000009567 136.0
CMS1_k127_2805394_29 Chorismate mutase K04782 - 4.2.99.21 0.00000000000000000000000000000000858 129.0
CMS1_k127_2805394_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 593.0
CMS1_k127_2805394_30 Rhodanese-like domain - - - 0.00000000000000000000000001815 114.0
CMS1_k127_2805394_31 Transcriptional regulator - - - 0.00000000000000000000000002561 114.0
CMS1_k127_2805394_32 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000002064 109.0
CMS1_k127_2805394_33 - - - - 0.000000000000000000008062 96.0
CMS1_k127_2805394_34 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001084 79.0
CMS1_k127_2805394_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 456.0
CMS1_k127_2805394_5 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 413.0
CMS1_k127_2805394_6 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 405.0
CMS1_k127_2805394_7 a g-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 387.0
CMS1_k127_2805394_8 coproporphyrinogen III oxidase K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 378.0
CMS1_k127_2805394_9 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002346 284.0
CMS1_k127_2809153_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00367,K00372,K08356 - 1.20.2.1,1.20.9.1,1.7.7.2 0.0 1071.0
CMS1_k127_2809153_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K15576 - - 3.444e-266 823.0
CMS1_k127_2809153_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 361.0
CMS1_k127_2809153_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 289.0
CMS1_k127_2809153_12 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000009918 219.0
CMS1_k127_2809153_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 2.996e-210 674.0
CMS1_k127_2809153_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 551.0
CMS1_k127_2809153_4 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00366,K00392 - 1.7.7.1,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 548.0
CMS1_k127_2809153_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 516.0
CMS1_k127_2809153_6 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 505.0
CMS1_k127_2809153_7 ABC transporter K15555,K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 458.0
CMS1_k127_2809153_8 COG0600 ABC-type nitrate sulfonate bicarbonate transport system permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 437.0
CMS1_k127_2809153_9 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 395.0
CMS1_k127_2817150_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1206.0
CMS1_k127_2817150_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.211e-264 819.0
CMS1_k127_2817150_10 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 533.0
CMS1_k127_2817150_11 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 536.0
CMS1_k127_2817150_12 Oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 525.0
CMS1_k127_2817150_13 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009646 510.0
CMS1_k127_2817150_14 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 488.0
CMS1_k127_2817150_15 Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 402.0
CMS1_k127_2817150_16 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 394.0
CMS1_k127_2817150_17 Outer membrane protein transport protein, Ompp1 FadL TodX K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 388.0
CMS1_k127_2817150_18 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 336.0
CMS1_k127_2817150_19 oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 329.0
CMS1_k127_2817150_2 Domain of unknown function (DUF1974) K06445 - - 5.003e-260 823.0
CMS1_k127_2817150_20 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 317.0
CMS1_k127_2817150_21 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 289.0
CMS1_k127_2817150_22 N-acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
CMS1_k127_2817150_23 2-oxoglutarate acceptor oxidoreductase K00176 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000107 201.0
CMS1_k127_2817150_24 - - - - 0.00000000000000000000000000000000000000000000009769 173.0
CMS1_k127_2817150_25 - - - - 0.000000000000000000000000000000000000008896 150.0
CMS1_k127_2817150_26 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000002588 145.0
CMS1_k127_2817150_27 Peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.000000000000000000000000000000002881 130.0
CMS1_k127_2817150_28 - - - - 0.0000000000000000000000000000006507 126.0
CMS1_k127_2817150_29 Heavy-metal-associated domain - - - 0.0000000000000000000000000001798 117.0
CMS1_k127_2817150_3 Cytochrome c554 and c-prime - - - 1.472e-239 761.0
CMS1_k127_2817150_30 Protein of unknown function (DUF3313) - - - 0.0000000000000006009 87.0
CMS1_k127_2817150_31 - - - - 0.000000000005528 68.0
CMS1_k127_2817150_32 - - - - 0.0000003597 53.0
CMS1_k127_2817150_33 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000462 48.0
CMS1_k127_2817150_4 Surface antigen K07001 - - 1.111e-238 759.0
CMS1_k127_2817150_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 5.321e-216 674.0
CMS1_k127_2817150_6 Oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.696e-209 655.0
CMS1_k127_2817150_7 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 4.158e-208 670.0
CMS1_k127_2817150_8 Chemoreceptor zinc-binding domain - - - 3.463e-207 650.0
CMS1_k127_2817150_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 537.0
CMS1_k127_2826402_0 COGs COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 509.0
CMS1_k127_2826402_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 436.0
CMS1_k127_2826402_2 E1 component alpha subunit K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 425.0
CMS1_k127_2826402_3 PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 401.0
CMS1_k127_2826402_4 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 388.0
CMS1_k127_2826402_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 367.0
CMS1_k127_2826402_6 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.000000000000000000000000000000000002206 154.0
CMS1_k127_2829423_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.718e-203 641.0
CMS1_k127_2829423_1 Belongs to the peptidase M16 family - - - 5.363e-203 640.0
CMS1_k127_2829423_10 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 373.0
CMS1_k127_2829423_11 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 319.0
CMS1_k127_2829423_12 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 329.0
CMS1_k127_2829423_13 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 302.0
CMS1_k127_2829423_14 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002776 265.0
CMS1_k127_2829423_15 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001157 276.0
CMS1_k127_2829423_16 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000033 222.0
CMS1_k127_2829423_17 - - - - 0.000000000000000000000000000000000000000003576 158.0
CMS1_k127_2829423_18 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000002115 128.0
CMS1_k127_2829423_19 -acetyltransferase K06975 - - 0.0000000000000000000000000000236 119.0
CMS1_k127_2829423_2 Mur ligase middle domain K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 591.0
CMS1_k127_2829423_20 DNA-binding protein VF530 - - - 0.0000000000000000000000000003317 114.0
CMS1_k127_2829423_21 Rhodanese Homology Domain - - - 0.00000000000000000000000006366 110.0
CMS1_k127_2829423_22 - - - - 0.0004631 45.0
CMS1_k127_2829423_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 535.0
CMS1_k127_2829423_4 Flagellar Assembly Protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 546.0
CMS1_k127_2829423_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 522.0
CMS1_k127_2829423_6 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
CMS1_k127_2829423_7 dehydrogenase K00076 - 1.1.1.159 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 462.0
CMS1_k127_2829423_8 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 464.0
CMS1_k127_2829423_9 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 441.0
CMS1_k127_2832427_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.947e-233 730.0
CMS1_k127_2832427_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 490.0
CMS1_k127_2832427_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 490.0
CMS1_k127_2832427_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 476.0
CMS1_k127_2832427_4 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 419.0
CMS1_k127_2832427_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000037 134.0
CMS1_k127_2834655_0 Efflux pump membrane transporter K03296,K18138 - - 0.0 1488.0
CMS1_k127_2834655_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 356.0
CMS1_k127_2834655_2 RND efflux system, outer membrane lipoprotein K18139 - - 0.000000000000000000000000000000000000000000000000000000000000006389 226.0
CMS1_k127_2834655_3 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000001306 158.0
CMS1_k127_2834655_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000003194 96.0
CMS1_k127_2834655_5 S4 domain K14761 - - 0.000000000000001988 81.0
CMS1_k127_2836692_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1078.0
CMS1_k127_2836692_1 response regulator K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 342.0
CMS1_k127_2836692_2 Histidine kinase K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 347.0
CMS1_k127_2836692_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 341.0
CMS1_k127_2836692_4 outer membrane porin, OprD family - - - 0.0000000000000000000000000000000000000000000000000000000588 203.0
CMS1_k127_2836692_5 methyltransferase K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000005264 188.0
CMS1_k127_2836692_6 protein-glutamate methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000003256 147.0
CMS1_k127_2836692_7 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000617 141.0
CMS1_k127_2836692_8 iron ion homeostasis K04758 - - 0.0000000000000000001031 91.0
CMS1_k127_2840156_0 Sulfatase - - - 1.621e-215 687.0
CMS1_k127_2840156_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 373.0
CMS1_k127_2840156_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.0006591 45.0
CMS1_k127_2847599_0 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 552.0
CMS1_k127_2847599_1 PFAM DsrE DsrF-like family - - - 0.00000000000000000000000000000000000000000002943 163.0
CMS1_k127_2847599_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000008727 136.0
CMS1_k127_2847599_3 - - - - 0.0000000000000000000000001197 115.0
CMS1_k127_2847599_4 - - - - 0.0000000000000000000002753 105.0
CMS1_k127_2847599_5 Protein of unknown function (DUF1295) - - - 0.000000000000000000001009 100.0
CMS1_k127_2854475_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.292e-283 889.0
CMS1_k127_2854475_1 Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 595.0
CMS1_k127_2854475_10 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009464 267.0
CMS1_k127_2854475_11 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000001255 210.0
CMS1_k127_2854475_12 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000003782 181.0
CMS1_k127_2854475_13 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000002099 176.0
CMS1_k127_2854475_14 Ferredoxin K05337 - - 0.000000000000000000000000000000000000000001127 157.0
CMS1_k127_2854475_15 cytochrome C oxidoreductase subunit B - - - 0.000000000000000000000000000000000000003446 147.0
CMS1_k127_2854475_16 - - - - 0.000000000000000001788 89.0
CMS1_k127_2854475_18 von Willebrand factor, type A K07114 - - 0.0000001862 54.0
CMS1_k127_2854475_2 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 505.0
CMS1_k127_2854475_3 Histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 505.0
CMS1_k127_2854475_4 Guanosine pentaphosphate phosphohydrolase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 473.0
CMS1_k127_2854475_5 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 432.0
CMS1_k127_2854475_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 391.0
CMS1_k127_2854475_7 prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 371.0
CMS1_k127_2854475_8 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 351.0
CMS1_k127_2854475_9 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 322.0
CMS1_k127_2878149_0 Histidine kinase K03407 - 2.7.13.3 3.174e-211 676.0
CMS1_k127_2878149_1 HD domain - - - 1.063e-200 636.0
CMS1_k127_2878149_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 607.0
CMS1_k127_2878149_3 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 316.0
CMS1_k127_2878149_4 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000002699 159.0
CMS1_k127_2878149_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000005069 129.0
CMS1_k127_2878149_6 SCO1/SenC K07152 - - 0.000000000000000000000000001725 119.0
CMS1_k127_2878149_7 - - - - 0.00000000000000000005836 94.0
CMS1_k127_2880992_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 531.0
CMS1_k127_2880992_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 453.0
CMS1_k127_2880992_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.0000000000000000000000000000741 121.0
CMS1_k127_2887255_0 COG4886 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 607.0
CMS1_k127_2887255_1 flagellar biosynthesis K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 588.0
CMS1_k127_2887255_10 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002861 278.0
CMS1_k127_2887255_11 chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002631 288.0
CMS1_k127_2887255_12 flagellar motor switch protein K02417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000132 269.0
CMS1_k127_2887255_13 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000002583 239.0
CMS1_k127_2887255_14 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000001828 190.0
CMS1_k127_2887255_15 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000002788 164.0
CMS1_k127_2887255_16 RNase H K03469 - 3.1.26.4 0.000000000000000000000000000000000000006211 150.0
CMS1_k127_2887255_17 - - - - 0.00000000000000000000003422 102.0
CMS1_k127_2887255_19 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000001389 79.0
CMS1_k127_2887255_2 flagellar motor switch protein K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 583.0
CMS1_k127_2887255_20 - - - - 0.000000000002762 72.0
CMS1_k127_2887255_3 COG0402 Cytosine deaminase and related metal-dependent K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 542.0
CMS1_k127_2887255_4 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 492.0
CMS1_k127_2887255_5 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 408.0
CMS1_k127_2887255_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 378.0
CMS1_k127_2887255_7 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 351.0
CMS1_k127_2887255_8 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008681 333.0
CMS1_k127_2887255_9 Belongs to the sigma-70 factor family K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 314.0
CMS1_k127_291418_0 Fatty acid cis/trans isomerase (CTI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 548.0
CMS1_k127_291418_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 329.0
CMS1_k127_2934442_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 3.608e-212 670.0
CMS1_k127_2934442_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 497.0
CMS1_k127_2934442_10 LPP20 lipoprotein - - - 0.000000000000000000000000000000000000000000000000000002672 196.0
CMS1_k127_2934442_11 signal transduction sensor histidine kinase - - - 0.00000000000000000000000000000000000000000000000002034 183.0
CMS1_k127_2934442_12 LPP20 lipoprotein - - - 0.000000000000000000003077 107.0
CMS1_k127_2934442_13 - - - - 0.000000000000000006146 85.0
CMS1_k127_2934442_14 - - - - 0.00000000000006029 77.0
CMS1_k127_2934442_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 483.0
CMS1_k127_2934442_3 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 351.0
CMS1_k127_2934442_4 Membrane-bound lytic murein transglycosylase C K08306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001971 276.0
CMS1_k127_2934442_5 hmm pf00563 - - - 0.000000000000000000000000000000000000000000000000000000000000000006644 252.0
CMS1_k127_2934442_6 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000551 223.0
CMS1_k127_2934442_7 - - - - 0.0000000000000000000000000000000000000000000000000000000002899 214.0
CMS1_k127_2934442_8 phosphoribosyltransferase K00769 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000005863 206.0
CMS1_k127_2934442_9 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000002354 194.0
CMS1_k127_2936164_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.148e-243 754.0
CMS1_k127_2936164_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 591.0
CMS1_k127_2936164_10 - - - - 0.000000000000000008087 87.0
CMS1_k127_2936164_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 586.0
CMS1_k127_2936164_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 450.0
CMS1_k127_2936164_4 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 445.0
CMS1_k127_2936164_5 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 428.0
CMS1_k127_2936164_6 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000001386 231.0
CMS1_k127_2936164_7 AMIN domain - - - 0.000000000000000000000000000000000000000000006401 169.0
CMS1_k127_2936164_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000003696 167.0
CMS1_k127_2936164_9 Flagellar biosynthetic protein FliQ K02420 - - 0.000000000000000000000000000001281 121.0
CMS1_k127_2943561_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 0.0 1009.0
CMS1_k127_2943561_1 Acyltransferase K05939 - 2.3.1.40,6.2.1.20 3.694e-235 747.0
CMS1_k127_2943561_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.258e-224 697.0
CMS1_k127_2943561_3 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 319.0
CMS1_k127_2943561_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002663 282.0
CMS1_k127_2953125_0 diguanylate cyclase K13069 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 329.0
CMS1_k127_2953125_1 abc transporter atp-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 284.0
CMS1_k127_2953125_2 RESPONSE REGULATOR receiver K07288 - - 0.0000000000000000001554 97.0
CMS1_k127_298258_0 abc transporter atp-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 578.0
CMS1_k127_298258_1 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 406.0
CMS1_k127_2993225_0 PFAM SNF2-related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 590.0
CMS1_k127_2993225_1 Pfam Transposase IS66 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 381.0
CMS1_k127_2993225_10 - - - - 0.000000000000006211 79.0
CMS1_k127_2993225_11 - - - - 0.00002424 55.0
CMS1_k127_2993225_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 355.0
CMS1_k127_2993225_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003941 298.0
CMS1_k127_2993225_4 HAD-superfamily hydrolase, subfamily IIB K07026,K15918 - 2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001287 282.0
CMS1_k127_2993225_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000001922 274.0
CMS1_k127_2993225_6 FMN binding - - - 0.000000000000000000000000000000000000000000002007 169.0
CMS1_k127_2993225_7 - - - - 0.00000000000000000000000000000000000001857 159.0
CMS1_k127_2993225_8 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000004882 141.0
CMS1_k127_2993225_9 Family of unknown function (DUF695) - - - 0.000000000000000000000000000002634 129.0
CMS1_k127_3016109_0 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 481.0
CMS1_k127_3016109_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 385.0
CMS1_k127_3016109_2 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 368.0
CMS1_k127_3016109_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 364.0
CMS1_k127_3016109_4 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 325.0
CMS1_k127_3016109_5 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008273 269.0
CMS1_k127_3016109_6 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007932 258.0
CMS1_k127_3016109_7 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004341 259.0
CMS1_k127_3016109_9 NUDIX domain K16855 - 3.6.1.62,3.6.1.64 0.0000001812 54.0
CMS1_k127_3057458_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 6.94e-291 897.0
CMS1_k127_3057458_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.382e-269 833.0
CMS1_k127_3057458_10 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000009208 216.0
CMS1_k127_3057458_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000007717 187.0
CMS1_k127_3057458_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000005071 186.0
CMS1_k127_3057458_13 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000001021 177.0
CMS1_k127_3057458_14 transport protein K03559 - - 0.00000000000000000000000000000000000000000002228 168.0
CMS1_k127_3057458_15 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000004875 160.0
CMS1_k127_3057458_16 Belongs to the ATPase B chain family K02109 - - 0.000000000000000000000000000000000000000002556 160.0
CMS1_k127_3057458_17 Response regulator receiver K07814 - - 0.000000000000000000000000000000000000000002608 158.0
CMS1_k127_3057458_18 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000013 158.0
CMS1_k127_3057458_19 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000004439 156.0
CMS1_k127_3057458_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 524.0
CMS1_k127_3057458_20 TonB C terminal K03832 - - 0.000000000000000000003932 102.0
CMS1_k127_3057458_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 516.0
CMS1_k127_3057458_4 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 450.0
CMS1_k127_3057458_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 422.0
CMS1_k127_3057458_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 398.0
CMS1_k127_3057458_7 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 375.0
CMS1_k127_3057458_8 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 299.0
CMS1_k127_3057458_9 MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005744 233.0
CMS1_k127_30894_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1040.0
CMS1_k127_30894_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 538.0
CMS1_k127_30894_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 300.0
CMS1_k127_30894_3 transformation system protein K02242 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002454 248.0
CMS1_k127_30894_4 - - - - 0.00000000005601 73.0
CMS1_k127_30894_5 - - - - 0.0000000001729 68.0
CMS1_k127_30894_6 S-layer homology domain - - - 0.0000000003369 72.0
CMS1_k127_30894_7 - - - - 0.0005298 45.0
CMS1_k127_3150326_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 312.0
CMS1_k127_3191393_0 diguanylate cyclase K13069 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 331.0
CMS1_k127_3191393_1 abc transporter atp-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 285.0
CMS1_k127_3191393_2 RESPONSE REGULATOR receiver K07288 - - 0.00000000000000000001795 100.0
CMS1_k127_3221151_0 cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1038.0
CMS1_k127_3221151_1 GlutRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.00000000000000000000000000000000000000001326 158.0
CMS1_k127_3221151_2 Cytochrome oxidase maturation protein - - - 0.00000000000001109 77.0
CMS1_k127_3225739_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 3.477e-220 692.0
CMS1_k127_3225739_1 ATP synthase K02412 - 3.6.3.14 3.057e-213 668.0
CMS1_k127_3225739_10 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 333.0
CMS1_k127_3225739_11 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 332.0
CMS1_k127_3225739_12 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 288.0
CMS1_k127_3225739_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000001839 239.0
CMS1_k127_3225739_14 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000003094 213.0
CMS1_k127_3225739_16 Protein of unknown function (DUF3313) - - - 0.000003565 57.0
CMS1_k127_3225739_2 Cysteine desulfurase K04487 - 2.8.1.7 3.254e-210 659.0
CMS1_k127_3225739_3 Mg chelatase-related protein K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 615.0
CMS1_k127_3225739_4 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 582.0
CMS1_k127_3225739_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 571.0
CMS1_k127_3225739_6 Belongs to the UPF0324 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 556.0
CMS1_k127_3225739_7 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 476.0
CMS1_k127_3225739_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 487.0
CMS1_k127_3225739_9 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 428.0
CMS1_k127_3293703_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.878e-199 627.0
CMS1_k127_3293703_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463 377.0
CMS1_k127_3293703_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 364.0
CMS1_k127_3293703_3 Protein of unknown function DUF115 - - - 0.00000000000000000000000000000000000000000000000000000000000003106 221.0
CMS1_k127_3339534_0 Sulfate permease family - - - 2.251e-197 623.0
CMS1_k127_3339534_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 499.0
CMS1_k127_3339534_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 332.0
CMS1_k127_3339534_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 295.0
CMS1_k127_3339534_4 ribosomal protein L3 K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008531 287.0
CMS1_k127_3339534_5 ATPase (AAA K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001411 289.0
CMS1_k127_3339534_6 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000000001207 192.0
CMS1_k127_3339534_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000000000000000000009026 166.0
CMS1_k127_3476803_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 9.974e-200 627.0
CMS1_k127_3476803_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 321.0
CMS1_k127_3476803_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000003275 161.0
CMS1_k127_349266_0 threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 543.0
CMS1_k127_349266_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 355.0
CMS1_k127_3608796_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008961 233.0
CMS1_k127_3608796_1 Mitochondrial degradasome RNA helicase subunit C terminal K17675 - 3.6.4.13 0.0000000000000000000000000000000000000000000000002314 188.0
CMS1_k127_3608796_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000000000000000007565 164.0
CMS1_k127_3608796_3 Domain of unknown function (DUF309) - - - 0.00000000000000000000000000000001014 132.0
CMS1_k127_3613620_0 phosphorylase kinase alphabeta K07190 - - 1.019e-267 839.0
CMS1_k127_3613620_1 diguanylate cyclase - - - 3.197e-256 802.0
CMS1_k127_3613620_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 497.0
CMS1_k127_3613620_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007205 441.0
CMS1_k127_3625355_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 367.0
CMS1_k127_3625355_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 310.0
CMS1_k127_3625355_2 Oxygen tolerance - - - 0.000000000000000000000000000000000000002598 160.0
CMS1_k127_3639366_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 556.0
CMS1_k127_3639366_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 353.0
CMS1_k127_3639366_2 molybdopterin biosynthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 354.0
CMS1_k127_3639366_3 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 297.0
CMS1_k127_3639366_4 General glycosylation pathway protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001249 262.0
CMS1_k127_3642224_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1446.0
CMS1_k127_3642224_1 COG0659 Sulfate permease and related K03321 - - 2.16e-232 728.0
CMS1_k127_3642224_10 ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 348.0
CMS1_k127_3642224_11 Transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 339.0
CMS1_k127_3642224_12 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 312.0
CMS1_k127_3642224_13 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 300.0
CMS1_k127_3642224_14 SMART GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007362 279.0
CMS1_k127_3642224_15 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008808 255.0
CMS1_k127_3642224_16 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000001131 233.0
CMS1_k127_3642224_17 - K21817 - 1.13.11.63 0.000000000000000000000000000000000000000000000000000000005604 210.0
CMS1_k127_3642224_18 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000003055 203.0
CMS1_k127_3642224_19 GatB Yqey family protein K09117 - - 0.000000000000000000000000000000000000000000000000001243 186.0
CMS1_k127_3642224_2 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 469.0
CMS1_k127_3642224_20 Uncharacterised protein family (UPF0153) K06940 - - 0.0000000000000000000000000000000000000000000005179 169.0
CMS1_k127_3642224_21 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000000000002969 146.0
CMS1_k127_3642224_23 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000007637 131.0
CMS1_k127_3642224_24 bacteriocin export ABC transporter, lactococcin 972 group K02003 - - 0.00000000000000000000000000000009679 133.0
CMS1_k127_3642224_25 Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000001754 111.0
CMS1_k127_3642224_26 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000004981 90.0
CMS1_k127_3642224_28 PFAM Prenyltransferase squalene oxidase - - - 0.00000002252 65.0
CMS1_k127_3642224_29 - - - - 0.000003359 57.0
CMS1_k127_3642224_3 PFAM HI0933 family protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 467.0
CMS1_k127_3642224_4 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 464.0
CMS1_k127_3642224_5 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 437.0
CMS1_k127_3642224_6 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 413.0
CMS1_k127_3642224_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 377.0
CMS1_k127_3642224_8 Protein of unknown function (DUF3137) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 351.0
CMS1_k127_3642224_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 344.0
CMS1_k127_3646206_0 General glycosylation pathway protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 379.0
CMS1_k127_3646206_1 lipopolysaccharide heptosyltransferase K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 351.0
CMS1_k127_3646206_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 330.0
CMS1_k127_3646206_3 lipid a biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000208 263.0
CMS1_k127_3646206_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000701 198.0
CMS1_k127_3646206_5 HI0933 family K07007 - - 0.000000000000000000000000000001159 122.0
CMS1_k127_36541_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.249e-296 924.0
CMS1_k127_36541_1 2-nitropropane dioxygenase K00459 - 1.13.12.16 4.715e-204 638.0
CMS1_k127_36541_10 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000005192 230.0
CMS1_k127_36541_11 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000001299 186.0
CMS1_k127_36541_12 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000005689 129.0
CMS1_k127_36541_13 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000001098 93.0
CMS1_k127_36541_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 603.0
CMS1_k127_36541_3 Peptidase s1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 453.0
CMS1_k127_36541_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008946 407.0
CMS1_k127_36541_5 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 419.0
CMS1_k127_36541_6 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 349.0
CMS1_k127_36541_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 349.0
CMS1_k127_36541_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003422 281.0
CMS1_k127_36541_9 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000007664 232.0
CMS1_k127_3659769_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.4e-244 755.0
CMS1_k127_3659769_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.574e-202 638.0
CMS1_k127_3659769_10 Binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000002789 182.0
CMS1_k127_3659769_2 Pilus assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 520.0
CMS1_k127_3659769_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 412.0
CMS1_k127_3659769_4 C-terminal domain of metallo-carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 407.0
CMS1_k127_3659769_5 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 374.0
CMS1_k127_3659769_6 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 332.0
CMS1_k127_3659769_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 305.0
CMS1_k127_3659769_8 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 294.0
CMS1_k127_3659769_9 - - - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
CMS1_k127_3663038_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 8.208e-209 657.0
CMS1_k127_3663038_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000001413 242.0
CMS1_k127_3664115_0 Belongs to the DEAD box helicase family K05592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.6.4.13 1.486e-196 621.0
CMS1_k127_3664115_1 DNA recombination protein K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 429.0
CMS1_k127_3664115_10 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000004043 109.0
CMS1_k127_3664115_11 - - - - 0.0000000000003259 71.0
CMS1_k127_3664115_12 heavy metal - - - 0.000000002547 65.0
CMS1_k127_3664115_13 outer membrane porin, OprD family - - - 0.000000003253 59.0
CMS1_k127_3664115_2 Cache domain K02480,K03406 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 404.0
CMS1_k127_3664115_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 349.0
CMS1_k127_3664115_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 311.0
CMS1_k127_3664115_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003065 262.0
CMS1_k127_3664115_6 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000003237 219.0
CMS1_k127_3664115_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000005948 208.0
CMS1_k127_3664115_8 Histidine kinase K07645 - 2.7.13.3 0.000000000000000000000000000000000000001046 163.0
CMS1_k127_3664115_9 outer membrane porin, OprD family - - - 0.0000000000000000000000000000000000009205 144.0
CMS1_k127_3689945_0 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 5.262e-206 649.0
CMS1_k127_3689945_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 537.0
CMS1_k127_3689945_2 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003089 251.0
CMS1_k127_3689945_3 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000447 237.0
CMS1_k127_3689945_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000009769 233.0
CMS1_k127_3689945_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006844 225.0
CMS1_k127_3689945_6 Belongs to the globin family K05916 - 1.14.12.17 0.000000000000000000000000000000000000000000000000001037 186.0
CMS1_k127_3689945_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000001684 83.0
CMS1_k127_3689945_8 His Kinase A (phosphoacceptor) domain - - - 0.00000004805 58.0
CMS1_k127_3724837_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 9.378e-255 808.0
CMS1_k127_3724837_1 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 328.0
CMS1_k127_3724837_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000001643 120.0
CMS1_k127_3724837_3 Histidine kinase K03407 - 2.7.13.3 0.0000000000000000000005919 108.0
CMS1_k127_3748291_0 PFAM biotin lipoyl attachment domain-containing protein K01960 - 6.4.1.1 0.0 1017.0
CMS1_k127_3748291_1 COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit K01572 - 4.1.1.3 8.26e-228 711.0
CMS1_k127_3748291_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 334.0
CMS1_k127_3748291_3 - - - - 0.000000000000000000000000000000000001315 141.0
CMS1_k127_3748291_4 Oxaloacetate decarboxylase, gamma chain K01573 - 4.1.1.3 0.00000000000000000569 85.0
CMS1_k127_3748291_5 - - - - 0.00000003001 61.0
CMS1_k127_3748291_6 - - - - 0.0005045 47.0
CMS1_k127_3748292_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1836.0
CMS1_k127_3748292_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 7.506e-218 681.0
CMS1_k127_3748292_2 rod shape-determining protein mreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 606.0
CMS1_k127_3748292_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 414.0
CMS1_k127_3748292_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000002373 264.0
CMS1_k127_3748292_5 Rod shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000001715 232.0
CMS1_k127_3748292_6 - - - - 0.000000000000000000000000000000000000000000000000000000001151 205.0
CMS1_k127_3748292_7 - - - - 0.000000000000000000000000000000000000000000000000004092 183.0
CMS1_k127_3748292_8 L-threonylcarbamoyladenylate synthase - - - 0.0000000000000000000000000000000000000002022 154.0
CMS1_k127_3748292_9 - - - - 0.000000000000000000000000000007885 124.0
CMS1_k127_3757713_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.704e-259 806.0
CMS1_k127_3757713_1 COG0841 Cation multidrug efflux pump - - - 6.75e-259 809.0
CMS1_k127_3757713_10 Protein of unknown function (DUF2892) - - - 0.00000000004359 64.0
CMS1_k127_3757713_2 Hpt sensor hybrid histidine kinase - - - 6.464e-252 804.0
CMS1_k127_3757713_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 539.0
CMS1_k127_3757713_4 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 470.0
CMS1_k127_3757713_5 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 359.0
CMS1_k127_3757713_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 347.0
CMS1_k127_3757713_7 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000001048 237.0
CMS1_k127_3757713_8 Stress responsive A B Barrel Domain - - - 0.0000000000000000000000000000002704 126.0
CMS1_k127_3757713_9 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000003086 115.0
CMS1_k127_3778576_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.383e-307 953.0
CMS1_k127_3778576_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002349 274.0
CMS1_k127_3778576_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000002437 208.0
CMS1_k127_3778576_3 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000006036 130.0
CMS1_k127_3778576_4 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000001298 114.0
CMS1_k127_3793452_0 sialic acid synthase K01654,K08068 - 2.5.1.56,3.2.1.183 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 597.0
CMS1_k127_3793452_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 573.0
CMS1_k127_3793452_2 PFAM O-Antigen K02847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 518.0
CMS1_k127_3793452_3 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 486.0
CMS1_k127_3793452_4 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005691 239.0
CMS1_k127_3793452_5 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000005483 181.0
CMS1_k127_3811348_0 Two component regulator three Y domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 381.0
CMS1_k127_3811348_1 PFAM PAS fold-3 domain protein K03776 - - 0.00000000000000000000000000000000000000000000000000000003057 198.0
CMS1_k127_3811348_2 - - - - 0.0000000000000000000000000000000000003666 145.0
CMS1_k127_3811348_3 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000003039 105.0
CMS1_k127_3817964_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 1840.0
CMS1_k127_3817964_1 PFAM Helicase conserved C-terminal domain K03579 - 3.6.4.13 0.0 1139.0
CMS1_k127_3817964_10 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000001048 229.0
CMS1_k127_3817964_11 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000002404 225.0
CMS1_k127_3817964_12 amidase activity K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000007239 203.0
CMS1_k127_3817964_13 superoxide reductase activity K05919 - 1.15.1.2 0.00000000000000000000000000000000005552 138.0
CMS1_k127_3817964_2 Amidase K01457 - 3.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 608.0
CMS1_k127_3817964_3 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 519.0
CMS1_k127_3817964_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 517.0
CMS1_k127_3817964_5 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 366.0
CMS1_k127_3817964_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 323.0
CMS1_k127_3817964_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 284.0
CMS1_k127_3817964_8 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000134 279.0
CMS1_k127_3817964_9 PhoU family K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003041 265.0
CMS1_k127_3820986_0 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K02584 - - 5.244e-266 827.0
CMS1_k127_3820986_1 fumarate reductase, flavoprotein subunit K00239,K00244 - 1.3.5.1,1.3.5.4 1.495e-228 719.0
CMS1_k127_3820986_10 Belongs to the ArsC family - - - 0.00000000000000000000000000000000836 130.0
CMS1_k127_3820986_11 - - - - 0.00000000000000000000001102 104.0
CMS1_k127_3820986_12 nitrogen fixation protein FixT K02593 - - 0.000000000000000000002043 95.0
CMS1_k127_3820986_14 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.000000000000004894 75.0
CMS1_k127_3820986_2 COG0714 MoxR-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 545.0
CMS1_k127_3820986_3 Putative metallopeptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008199 498.0
CMS1_k127_3820986_4 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 472.0
CMS1_k127_3820986_5 TIGRFAM SagB-type dehydrogenase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 295.0
CMS1_k127_3820986_6 AhpC/TSA family K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004671 277.0
CMS1_k127_3820986_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005611 273.0
CMS1_k127_3820986_8 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000009984 192.0
CMS1_k127_3820986_9 NifQ K15790 - - 0.00000000000000000000000000000000002363 138.0
CMS1_k127_3841746_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922 - 1.12.5.1 0.0 1100.0
CMS1_k127_3841746_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.706e-268 846.0
CMS1_k127_3841746_10 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 298.0
CMS1_k127_3841746_11 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 286.0
CMS1_k127_3841746_12 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002072 253.0
CMS1_k127_3841746_13 hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000000002621 240.0
CMS1_k127_3841746_14 hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000004572 231.0
CMS1_k127_3841746_15 Enoyl-CoA hydratase/isomerase K19640 - - 0.0000000000000000000000000000000000000000000000001651 178.0
CMS1_k127_3841746_16 HypF finger - - - 0.00000000000000000000000000000000000000003274 173.0
CMS1_k127_3841746_17 hydrogenase assembly chaperone HypC K04653 - - 0.00000000000000000000000000000000000007253 144.0
CMS1_k127_3841746_18 - - - - 0.000000000000000000000000000000000001722 139.0
CMS1_k127_3841746_2 Small subunit K05927 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.12.5.1 1.548e-243 756.0
CMS1_k127_3841746_3 Belongs to the HypD family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 595.0
CMS1_k127_3841746_4 hydrogenase expression formation protein K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 490.0
CMS1_k127_3841746_5 Hydrogenase K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 445.0
CMS1_k127_3841746_6 Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 386.0
CMS1_k127_3841746_7 Hydrogenase, large subunit K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 396.0
CMS1_k127_3841746_8 PFAM NADH ubiquinone oxidoreductase, 20 Kd subunit K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 312.0
CMS1_k127_3841746_9 Family of unknown function (DUF695) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 303.0
CMS1_k127_3949235_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 4.962e-234 747.0
CMS1_k127_3949235_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 559.0
CMS1_k127_3949235_2 permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 501.0
CMS1_k127_3949235_3 Uncharacterised signal transduction histidine kinase domain (DUF2222) - - - 0.00000000000000000000000000000000000003836 160.0
CMS1_k127_3949235_4 Redox-active disulfide protein - - - 0.000000000000000000000000000000000609 131.0
CMS1_k127_3953208_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.848e-307 962.0
CMS1_k127_3953208_1 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 556.0
CMS1_k127_3953208_10 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 291.0
CMS1_k127_3953208_11 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004884 281.0
CMS1_k127_3953208_12 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000006195 169.0
CMS1_k127_3953208_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000001458 168.0
CMS1_k127_3953208_14 COG1214 Inactive homolog of metal-dependent proteases - - - 0.00000000000000000000000000000000000000001031 159.0
CMS1_k127_3953208_15 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000005573 146.0
CMS1_k127_3953208_16 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000002429 136.0
CMS1_k127_3953208_17 nucleic-acid-binding protein implicated in transcription termination - - - 0.000000000000001997 78.0
CMS1_k127_3953208_18 - - - - 0.0008097 47.0
CMS1_k127_3953208_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 489.0
CMS1_k127_3953208_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 483.0
CMS1_k127_3953208_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 472.0
CMS1_k127_3953208_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 463.0
CMS1_k127_3953208_6 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 447.0
CMS1_k127_3953208_7 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007511 419.0
CMS1_k127_3953208_8 riboflavin biosynthesis protein K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 380.0
CMS1_k127_3953208_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 351.0
CMS1_k127_4053430_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2278.0
CMS1_k127_4053430_1 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 6.274e-237 738.0
CMS1_k127_4053430_10 - - - - 0.00000003565 57.0
CMS1_k127_4053430_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 509.0
CMS1_k127_4053430_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 448.0
CMS1_k127_4053430_4 RecO N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 275.0
CMS1_k127_4053430_5 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000001346 254.0
CMS1_k127_4053430_6 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000001342 240.0
CMS1_k127_4053430_7 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000005886 202.0
CMS1_k127_4053430_8 DnaK suppressor protein K06204 - - 0.000000000000000000000000000000000000000000003706 166.0
CMS1_k127_4053430_9 COG0513 Superfamily II DNA and RNA K11927 - 3.6.4.13 0.000000000000008807 78.0
CMS1_k127_4079116_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.019e-277 859.0
CMS1_k127_4079116_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 599.0
CMS1_k127_4079116_10 cheY-homologous receiver domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000001205 267.0
CMS1_k127_4079116_11 Histidine kinase K13040 - 2.7.13.3 0.0000000000000000000000000000000000000000000001317 189.0
CMS1_k127_4079116_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000001096 137.0
CMS1_k127_4079116_13 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000001339 143.0
CMS1_k127_4079116_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 591.0
CMS1_k127_4079116_3 Two-component sensor histidine kinase response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 616.0
CMS1_k127_4079116_4 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009632 421.0
CMS1_k127_4079116_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 385.0
CMS1_k127_4079116_6 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 377.0
CMS1_k127_4079116_7 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 394.0
CMS1_k127_4079116_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 372.0
CMS1_k127_4079116_9 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 368.0
CMS1_k127_4134253_0 Magnesium transport protein CorA K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 431.0
CMS1_k127_4134253_1 Domain of unknown function (DUF4136) - - - 0.0000000000000003543 85.0
CMS1_k127_4134253_2 HI0933-like protein K07007 - - 0.0000000002481 61.0
CMS1_k127_4164882_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 421.0
CMS1_k127_4164882_1 Abc transporter K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 338.0
CMS1_k127_4164882_10 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000004886 123.0
CMS1_k127_4164882_11 Belongs to the BI1 family K19416 - - 0.0000000000000000000252 90.0
CMS1_k127_4164882_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 329.0
CMS1_k127_4164882_3 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 334.0
CMS1_k127_4164882_4 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 327.0
CMS1_k127_4164882_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 289.0
CMS1_k127_4164882_6 Methyltransferase domain K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000003859 258.0
CMS1_k127_4164882_7 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000115 253.0
CMS1_k127_4164882_8 thiamine-phosphate diphosphorylase activity K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000001634 189.0
CMS1_k127_4164882_9 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000000000000000000002362 140.0
CMS1_k127_4218606_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 564.0
CMS1_k127_4218606_1 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 516.0
CMS1_k127_4218606_2 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 387.0
CMS1_k127_4218606_3 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 293.0
CMS1_k127_4218606_4 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000983 280.0
CMS1_k127_4218606_5 Hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000001465 233.0
CMS1_k127_4218606_6 COGs COG4087 Soluble P-type ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000004601 224.0
CMS1_k127_4218606_7 Hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000008862 123.0
CMS1_k127_4224384_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1233.0
CMS1_k127_4224384_1 Flagellar basal body protein K02390 - - 2.868e-226 716.0
CMS1_k127_4224384_10 phosphate transport system permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 366.0
CMS1_k127_4224384_11 (EAL) domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 344.0
CMS1_k127_4224384_12 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 324.0
CMS1_k127_4224384_13 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000954 272.0
CMS1_k127_4224384_14 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002547 255.0
CMS1_k127_4224384_15 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002368 253.0
CMS1_k127_4224384_16 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
CMS1_k127_4224384_17 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000258 253.0
CMS1_k127_4224384_18 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000002272 242.0
CMS1_k127_4224384_19 - K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000001835 220.0
CMS1_k127_4224384_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.917e-198 625.0
CMS1_k127_4224384_20 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000001825 206.0
CMS1_k127_4224384_21 - K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000001398 206.0
CMS1_k127_4224384_22 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000000000000000000000000002063 198.0
CMS1_k127_4224384_23 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000004136 199.0
CMS1_k127_4224384_24 TraB family K09973 - - 0.000000000000000000000000000000000000000000001864 177.0
CMS1_k127_4224384_25 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000003136 168.0
CMS1_k127_4224384_26 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000005713 136.0
CMS1_k127_4224384_27 Belongs to the UPF0061 (SELO) family - - - 0.00000000000000000000000000001265 119.0
CMS1_k127_4224384_28 membrane - - - 0.0000000000000000000000000003838 119.0
CMS1_k127_4224384_29 MOSC domain - - - 0.0000000000000000000000000004615 121.0
CMS1_k127_4224384_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 603.0
CMS1_k127_4224384_30 - - - - 0.000000000000000000000000004346 115.0
CMS1_k127_4224384_32 Belongs to the UPF0061 (SELO) family - - - 0.000000000003149 67.0
CMS1_k127_4224384_34 Belongs to the UPF0061 (SELO) family - - - 0.0009868 47.0
CMS1_k127_4224384_4 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 581.0
CMS1_k127_4224384_5 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 528.0
CMS1_k127_4224384_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 483.0
CMS1_k127_4224384_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 457.0
CMS1_k127_4224384_8 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 461.0
CMS1_k127_4224384_9 Flagellar basal body protein K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 377.0
CMS1_k127_4310621_0 Glycosyltransferase, group 2 family protein K12990 - - 0.0000000000000000000000000000000000000000000000000000004235 203.0
CMS1_k127_4310621_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000002945 157.0
CMS1_k127_4310621_2 Capsule polysaccharide biosynthesis protein - - - 0.000000000000000000000000000003951 134.0
CMS1_k127_4310621_3 PFAM glycosyl transferase group 1 - - - 0.00000000009555 73.0
CMS1_k127_439109_0 Receptor - - - 8.628e-236 739.0
CMS1_k127_439109_1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 561.0
CMS1_k127_439109_2 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 329.0
CMS1_k127_439109_3 ABC transporter permease K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001461 244.0
CMS1_k127_439109_4 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000004732 172.0
CMS1_k127_439109_5 TOBE domain - - - 0.000000000000000000000000007213 114.0
CMS1_k127_4498058_0 flagellar hook-associated protein K02396 - - 3.036e-207 661.0
CMS1_k127_4498058_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 478.0
CMS1_k127_4498058_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 467.0
CMS1_k127_4498058_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000003673 228.0
CMS1_k127_4498058_4 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034,K12370 - - 0.000000000000000000000000000000000000000000000002613 175.0
CMS1_k127_4498058_5 - - - - 0.00000000000000000000000000000000000000000000007453 172.0
CMS1_k127_4498058_6 - - - - 0.00000000000000000000000000002746 121.0
CMS1_k127_4498058_7 Rod binding protein - - - 0.00000000000000000000003776 103.0
CMS1_k127_4498058_8 Anti-sigma-28 factor, FlgM - - - 0.0000000001164 64.0
CMS1_k127_4501996_0 PFAM CheW domain protein - - - 1.862e-273 867.0
CMS1_k127_4501996_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 1.582e-226 705.0
CMS1_k127_4501996_10 MiaB-like tRNA modifying enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 519.0
CMS1_k127_4501996_11 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 494.0
CMS1_k127_4501996_12 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 438.0
CMS1_k127_4501996_13 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 406.0
CMS1_k127_4501996_14 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 377.0
CMS1_k127_4501996_15 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 357.0
CMS1_k127_4501996_16 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 325.0
CMS1_k127_4501996_17 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 328.0
CMS1_k127_4501996_18 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000009603 244.0
CMS1_k127_4501996_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005421 229.0
CMS1_k127_4501996_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 4.686e-211 660.0
CMS1_k127_4501996_20 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000004394 206.0
CMS1_k127_4501996_21 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000004776 153.0
CMS1_k127_4501996_22 helicase activity - - - 0.0000000000000000000000000000004638 131.0
CMS1_k127_4501996_23 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000002379 76.0
CMS1_k127_4501996_3 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 3.888e-195 614.0
CMS1_k127_4501996_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 6.709e-194 623.0
CMS1_k127_4501996_5 dehydrogenase K08325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 599.0
CMS1_k127_4501996_6 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 603.0
CMS1_k127_4501996_7 domain protein K09944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 601.0
CMS1_k127_4501996_8 Acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 586.0
CMS1_k127_4501996_9 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 572.0
CMS1_k127_4507358_0 DNA polymerase K02337 - 2.7.7.7 0.0 1969.0
CMS1_k127_4507358_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 1.981e-284 893.0
CMS1_k127_4507358_10 Hit family K02503 - - 0.00000000000000000000000000000000000000000000000000001244 191.0
CMS1_k127_4507358_11 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.000000000000000000000000000000000000000000000006615 178.0
CMS1_k127_4507358_13 redox protein regulator of disulfide bond formation K07397 - - 0.0000004489 52.0
CMS1_k127_4507358_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.174e-264 822.0
CMS1_k127_4507358_3 ribosomal protein S1 K02945 - - 6.032e-255 796.0
CMS1_k127_4507358_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 2.322e-203 640.0
CMS1_k127_4507358_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 538.0
CMS1_k127_4507358_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 405.0
CMS1_k127_4507358_7 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 377.0
CMS1_k127_4507358_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 340.0
CMS1_k127_4507358_9 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000004876 236.0
CMS1_k127_4509276_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
CMS1_k127_4509276_1 sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000584 253.0
CMS1_k127_4509276_2 Regulator - - - 0.000000000000000000000000000000000000000004482 162.0
CMS1_k127_4509276_3 Histidine kinase - - - 0.0000000000000000000000000000047 123.0
CMS1_k127_4534870_0 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 572.0
CMS1_k127_4534870_1 PFAM O-Antigen K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 529.0
CMS1_k127_4534870_2 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000003332 228.0
CMS1_k127_4534870_3 ABC transporter K11085 - - 0.000000000000000000000000000000000000000000000000009004 183.0
CMS1_k127_4534870_4 glycosyl transferase - - - 0.000001395 51.0
CMS1_k127_4563964_0 Mate efflux family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 376.0
CMS1_k127_4563964_1 Desulfoferrodoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000001253 224.0
CMS1_k127_4563964_2 COG0433 Predicted ATPase - - - 0.00000000000000000000000000000000000000000000000000000002357 199.0
CMS1_k127_4563964_3 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000002987 178.0
CMS1_k127_4569383_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 1.448e-201 637.0
CMS1_k127_4569383_1 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 571.0
CMS1_k127_4569383_2 heptosyltransferase ii K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 424.0
CMS1_k127_4569383_3 lipopolysaccharide core region biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 423.0
CMS1_k127_4569383_4 - - - - 0.00000000000000000000000000000000000001068 152.0
CMS1_k127_4569383_5 Cytochrome c553 K08738 - - 0.0000000000000000000000000000000002903 133.0
CMS1_k127_4569383_6 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000007668 76.0
CMS1_k127_4569383_7 VanZ like family - - - 0.0000000001029 67.0
CMS1_k127_4570624_0 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 426.0
CMS1_k127_4570624_1 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001808 275.0
CMS1_k127_4570624_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000004874 116.0
CMS1_k127_4570624_3 - - - - 0.000007562 48.0
CMS1_k127_4578718_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 454.0
CMS1_k127_4578718_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 361.0
CMS1_k127_4578718_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 356.0
CMS1_k127_4578718_3 paraquat-inducible protein A K03808 - - 0.000000000000000000000000000000000000000000000161 175.0
CMS1_k127_4578718_4 Cytochrome c - - - 0.00000000000000000000000000003103 119.0
CMS1_k127_4578718_5 Paraquat-inducible protein A K03808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000007489 79.0
CMS1_k127_4624536_0 Nitrogenase protein alpha chain K02586 - 1.18.6.1 3.144e-300 923.0
CMS1_k127_4624536_1 Nitrogenase cofactor biosynthesis protein NifB K02585 - - 1.134e-272 842.0
CMS1_k127_4624536_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 321.0
CMS1_k127_4624536_11 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 308.0
CMS1_k127_4624536_12 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 297.0
CMS1_k127_4624536_13 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001855 270.0
CMS1_k127_4624536_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 252.0
CMS1_k127_4624536_15 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008685 226.0
CMS1_k127_4624536_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000004933 222.0
CMS1_k127_4624536_17 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000005632 213.0
CMS1_k127_4624536_18 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000154 212.0
CMS1_k127_4624536_19 beta-lactamase activity K07126 - - 0.0000000000000000000000000000000000000000000000000000000001121 212.0
CMS1_k127_4624536_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 9.68e-222 691.0
CMS1_k127_4624536_20 Pathogenicity locus - - - 0.000000000000000000000000000000000000000000000000002673 183.0
CMS1_k127_4624536_21 - - - - 0.000000000000000000000000000000000000000000000002687 178.0
CMS1_k127_4624536_22 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000001289 170.0
CMS1_k127_4624536_25 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.00000000000000000000000000000000000001723 147.0
CMS1_k127_4624536_26 - - - - 0.0000000000000000000000000000000000005835 142.0
CMS1_k127_4624536_27 - - - - 0.00000000000000000000000000000003093 128.0
CMS1_k127_4624536_28 molybdate ion transport K02017,K06857 - 3.6.3.29,3.6.3.55 0.000000000000000000000001736 108.0
CMS1_k127_4624536_29 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000002015 117.0
CMS1_k127_4624536_3 Cysteine desulfurase K04487 - 2.8.1.7 7.293e-215 672.0
CMS1_k127_4624536_30 - - - - 0.000000000000000000000004107 104.0
CMS1_k127_4624536_31 Rop-like - - - 0.00000000000000000005438 91.0
CMS1_k127_4624536_33 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000005917 69.0
CMS1_k127_4624536_34 Fe2 transport system protein A K04758 - - 0.000000002036 61.0
CMS1_k127_4624536_35 -acetyltransferase - - - 0.00002136 56.0
CMS1_k127_4624536_4 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 554.0
CMS1_k127_4624536_5 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 539.0
CMS1_k127_4624536_6 transferase activity, transferring glycosyl groups K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 511.0
CMS1_k127_4624536_7 COG4886 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 480.0
CMS1_k127_4624536_8 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 442.0
CMS1_k127_4693041_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 1.363e-314 976.0
CMS1_k127_4693041_1 Phospholipid glycerol acyltransferase - - - 1.147e-238 751.0
CMS1_k127_4693041_11 Belongs to the pseudouridine synthase RluA family K06180 - 5.4.99.23 0.000000000000000000000000000000000002044 140.0
CMS1_k127_4693041_13 - - - - 0.00000001917 61.0
CMS1_k127_4693041_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 566.0
CMS1_k127_4693041_3 Cytochrome K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 501.0
CMS1_k127_4693041_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 465.0
CMS1_k127_4693041_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 458.0
CMS1_k127_4693041_6 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 376.0
CMS1_k127_4693041_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 350.0
CMS1_k127_4693041_8 Desulfoferrodoxin, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 339.0
CMS1_k127_4693041_9 phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 301.0
CMS1_k127_4694466_0 ATP-dependent DNA helicase K03655 - 3.6.4.12 2.26e-214 681.0
CMS1_k127_4694466_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 1.754e-194 609.0
CMS1_k127_4694466_2 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 479.0
CMS1_k127_4694466_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000261 230.0
CMS1_k127_4694466_4 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.0000000000000000000000000000000000000000000000000000000000003266 216.0
CMS1_k127_4694466_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000007553 124.0
CMS1_k127_4742592_0 DNA helicase K03657 - 3.6.4.12 0.0 1025.0
CMS1_k127_4742592_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.914e-319 987.0
CMS1_k127_4742592_10 ubiquinol cytochrome c oxidoreductase, cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 310.0
CMS1_k127_4742592_11 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K00477 - 1.14.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 300.0
CMS1_k127_4742592_12 riboflavin synthase alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 296.0
CMS1_k127_4742592_13 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 298.0
CMS1_k127_4742592_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 299.0
CMS1_k127_4742592_15 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 293.0
CMS1_k127_4742592_16 Hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005316 281.0
CMS1_k127_4742592_17 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001339 263.0
CMS1_k127_4742592_18 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000006142 258.0
CMS1_k127_4742592_19 carbonic anhydrase K01674 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000004605 236.0
CMS1_k127_4742592_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 4.642e-226 704.0
CMS1_k127_4742592_20 pyruvate ferredoxin oxidoreductase K00171 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000002969 227.0
CMS1_k127_4742592_21 Glycosyl transferase family, helical bundle domain - - - 0.00000000000000000000000000000000000000000000000000000000000009297 224.0
CMS1_k127_4742592_22 - - - - 0.000000000000000000000000000000000000000000000000003505 185.0
CMS1_k127_4742592_23 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000002485 165.0
CMS1_k127_4742592_24 - - - - 0.000000000000000000000000000000000003414 143.0
CMS1_k127_4742592_25 - - - - 0.0000000000000000000000000002769 118.0
CMS1_k127_4742592_26 of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.000000000000000000000002737 105.0
CMS1_k127_4742592_28 outer membrane porin, OprD family - - - 0.00005545 54.0
CMS1_k127_4742592_3 Abc transporter K02035 - - 6.808e-213 671.0
CMS1_k127_4742592_4 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 2.031e-198 625.0
CMS1_k127_4742592_5 pyruvate ferredoxin oxidoreductase K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 592.0
CMS1_k127_4742592_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008436 478.0
CMS1_k127_4742592_7 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 339.0
CMS1_k127_4742592_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 337.0
CMS1_k127_4742592_9 pyruvate ferredoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 307.0
CMS1_k127_4754512_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1310.0
CMS1_k127_4754512_1 Malate quinone- oxidoreductase K00116 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 598.0
CMS1_k127_4754512_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000003233 246.0
CMS1_k127_4760874_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 415.0
CMS1_k127_4760874_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
CMS1_k127_4760874_2 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 294.0
CMS1_k127_4760874_3 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000007449 171.0
CMS1_k127_4760874_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000006684 145.0
CMS1_k127_4760874_5 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000002186 123.0
CMS1_k127_4760874_6 - - - - 0.0000000000000000000000002523 114.0
CMS1_k127_4764334_0 Large extracellular alpha-helical protein K06894 - - 0.0 1652.0
CMS1_k127_4764334_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 556.0
CMS1_k127_4764334_2 - - - - 0.0000000000000006759 85.0
CMS1_k127_4764334_3 cytochrome K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000003565 91.0
CMS1_k127_4782835_0 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 337.0
CMS1_k127_4782835_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000001535 220.0
CMS1_k127_4782835_2 Protein of unknown function (DUF3584) - - - 0.00000000000000000000000000000000000000000000000005325 199.0
CMS1_k127_4786074_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.058e-251 789.0
CMS1_k127_4786074_1 Ggdef domain containing protein - - - 0.00003493 50.0
CMS1_k127_4865057_0 Belongs to the aconitase IPM isomerase family K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:0097159,GO:1901363,GO:1901575 4.2.1.3,4.2.1.99 0.0 1454.0
CMS1_k127_4865057_1 Belongs to the FtsK SpoIIIE SftA family K03466 - - 7.622e-298 931.0
CMS1_k127_4865057_2 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 8.065e-287 897.0
CMS1_k127_4865057_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 562.0
CMS1_k127_4865057_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000008374 91.0
CMS1_k127_4950914_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 3.4e-295 934.0
CMS1_k127_4950914_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 3.134e-198 621.0
CMS1_k127_4950914_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 396.0
CMS1_k127_4970252_0 Pilus assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 591.0
CMS1_k127_4970252_1 - - - - 0.000000000000000000000000000000000000000000000000000002782 197.0
CMS1_k127_4970252_2 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000008339 149.0
CMS1_k127_4970252_3 - - - - 0.00003895 53.0
CMS1_k127_4984861_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 342.0
CMS1_k127_4984861_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 295.0
CMS1_k127_4984861_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000115 265.0
CMS1_k127_4984861_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000002769 246.0
CMS1_k127_4984861_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000004219 239.0
CMS1_k127_4984861_5 Mannosyl-glycoprotein K03796 - - 0.0000000000000000000000000000000000000000000000000000000000000003767 228.0
CMS1_k127_4984861_6 chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000005605 201.0
CMS1_k127_4984861_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000001692 182.0
CMS1_k127_4984861_8 Belongs to the UPF0250 family - - - 0.000000000000000000000000000002805 122.0
CMS1_k127_5078875_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.264e-313 968.0
CMS1_k127_5078875_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 314.0
CMS1_k127_5078875_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003865 268.0
CMS1_k127_5078875_3 flagellar - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001819 265.0
CMS1_k127_5078875_4 flagellar motor switch protein K02417 - - 0.000000000000000000000000000000000000000000001262 167.0
CMS1_k127_5078875_5 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000006326 122.0
CMS1_k127_5098401_0 Sulfatase-modifying factor enzyme 1 - - - 1.117e-297 928.0
CMS1_k127_5098401_1 aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 423.0
CMS1_k127_5098401_10 - - - - 0.00000000000000001918 85.0
CMS1_k127_5098401_12 COG0308 Aminopeptidase N K01256 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0016020,GO:0016787,GO:0019538,GO:0033218,GO:0042277,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.11.2 0.0000000000002431 74.0
CMS1_k127_5098401_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 327.0
CMS1_k127_5098401_3 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 304.0
CMS1_k127_5098401_4 PFAM dUTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005016 267.0
CMS1_k127_5098401_5 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000001372 226.0
CMS1_k127_5098401_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000001969 160.0
CMS1_k127_5098401_7 nucleoside 2-deoxyribosyltransferase K08728 - 2.4.2.6 0.00000000000000000000000000000000000006387 148.0
CMS1_k127_5098401_8 Cytochrome c - - - 0.00000000000000000000000000000000005256 138.0
CMS1_k127_5098401_9 cofactor binding K09979 - - 0.0000000000000000000000000000000103 131.0
CMS1_k127_5145152_0 Glycerol-3-phosphate dehydrogenase K11473 - - 1.548e-222 696.0
CMS1_k127_5145152_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 539.0
CMS1_k127_5145152_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 422.0
CMS1_k127_5145152_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 393.0
CMS1_k127_5145152_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 376.0
CMS1_k127_5145152_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 369.0
CMS1_k127_5145152_6 acid membrane antigen A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 356.0
CMS1_k127_5145152_7 Histidine kinase K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000004895 199.0
CMS1_k127_5270138_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.13e-240 760.0
CMS1_k127_5270138_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 514.0
CMS1_k127_5270138_10 thioesterase K07107 - - 0.0000000000000000000000000000000000001316 144.0
CMS1_k127_5270138_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 422.0
CMS1_k127_5270138_3 Histidine kinase A domain protein K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 395.0
CMS1_k127_5270138_4 dna polymerase iii K10857 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 364.0
CMS1_k127_5270138_5 leucine binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 368.0
CMS1_k127_5270138_6 COGs COG0665 Glycine D-amino acid oxidase (deaminating) K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 331.0
CMS1_k127_5270138_7 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000002394 230.0
CMS1_k127_5270138_8 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000000009271 223.0
CMS1_k127_5270138_9 alpha beta K06889 - - 0.00000000000000000000000000000000000002027 154.0
CMS1_k127_5336085_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0000018,GO:0008150,GO:0009892,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0080090 - 7.151e-258 814.0
CMS1_k127_5336085_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 9.66e-202 635.0
CMS1_k127_5336085_10 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000009727 163.0
CMS1_k127_5336085_11 - - - - 0.0000000000000000000000000003869 122.0
CMS1_k127_5336085_12 cytochrome - - - 0.00000000000000001591 90.0
CMS1_k127_5336085_14 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000001 64.0
CMS1_k127_5336085_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 562.0
CMS1_k127_5336085_3 COG0436 Aspartate tyrosine aromatic aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581 535.0
CMS1_k127_5336085_4 7TM diverse intracellular signalling K20971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 505.0
CMS1_k127_5336085_5 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 361.0
CMS1_k127_5336085_6 hydrolase K01501 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 341.0
CMS1_k127_5336085_7 o-acetylhomoserine K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004065 266.0
CMS1_k127_5336085_8 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000001109 179.0
CMS1_k127_5336085_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000007973 178.0
CMS1_k127_534021_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.0 1256.0
CMS1_k127_534021_1 ABC transporter, ATP-binding protein K13926 - - 2.891e-225 709.0
CMS1_k127_534021_10 Belongs to the DNA mismatch repair MutS family K03555 - - 0.0000000000000000000000000000000000000000004465 158.0
CMS1_k127_534021_11 - - - - 0.0000000000000000000000000000000000000000004477 160.0
CMS1_k127_534021_12 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000001198 118.0
CMS1_k127_534021_13 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000001523 74.0
CMS1_k127_534021_2 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 478.0
CMS1_k127_534021_3 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 467.0
CMS1_k127_534021_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 444.0
CMS1_k127_534021_5 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 378.0
CMS1_k127_534021_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 350.0
CMS1_k127_534021_7 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 288.0
CMS1_k127_534021_8 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000006784 229.0
CMS1_k127_534021_9 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000004422 207.0
CMS1_k127_5394375_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 7.666e-210 673.0
CMS1_k127_5394375_1 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009265 399.0
CMS1_k127_5394375_2 Acyl-homoserine-lactone synthase - - - 0.0000000000000000000000000000000000005866 146.0
CMS1_k127_5394375_3 helicase activity K05592,K06877,K07462,K11927 - 3.6.4.13 0.0000000000000000000000000000001246 132.0
CMS1_k127_5394375_4 - - - - 0.000000000002695 74.0
CMS1_k127_5400973_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1090.0
CMS1_k127_5400973_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 1.434e-313 970.0
CMS1_k127_5400973_10 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000004712 221.0
CMS1_k127_5400973_11 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000009965 222.0
CMS1_k127_5400973_12 PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000002942 212.0
CMS1_k127_5400973_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000004935 164.0
CMS1_k127_5400973_14 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000002466 137.0
CMS1_k127_5400973_15 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000003096 128.0
CMS1_k127_5400973_16 Thioredoxin - - - 0.00000000000000000000000000284 114.0
CMS1_k127_5400973_17 - - - - 0.00000000000004975 76.0
CMS1_k127_5400973_2 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 1.255e-249 779.0
CMS1_k127_5400973_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 3.17e-202 642.0
CMS1_k127_5400973_4 Paralysed flagella protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000767 535.0
CMS1_k127_5400973_5 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 486.0
CMS1_k127_5400973_6 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 419.0
CMS1_k127_5400973_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 308.0
CMS1_k127_5400973_8 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000748 273.0
CMS1_k127_5400973_9 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000002409 227.0
CMS1_k127_5427779_0 fumarate reductase, flavoprotein subunit K00244 - 1.3.5.4 0.0 1055.0
CMS1_k127_5427779_1 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1024.0
CMS1_k127_5427779_10 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 304.0
CMS1_k127_5427779_11 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001555 291.0
CMS1_k127_5427779_12 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit - - - 0.000000000000000000000000000000000000000000000000000137 200.0
CMS1_k127_5427779_13 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000003001 174.0
CMS1_k127_5427779_14 - - - - 0.000000000000000000000000000000005254 136.0
CMS1_k127_5427779_2 Heterodisulfide reductase subunit B K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 496.0
CMS1_k127_5427779_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 481.0
CMS1_k127_5427779_4 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 437.0
CMS1_k127_5427779_5 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 405.0
CMS1_k127_5427779_6 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 383.0
CMS1_k127_5427779_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 340.0
CMS1_k127_5427779_8 fumarate reductase respiratory complex transmembrane subunit K00246 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 319.0
CMS1_k127_5427779_9 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 314.0
CMS1_k127_5452030_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.843e-215 674.0
CMS1_k127_5452030_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 331.0
CMS1_k127_5452030_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 298.0
CMS1_k127_5452030_3 protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.00002238 53.0
CMS1_k127_5467946_0 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.155e-234 728.0
CMS1_k127_5467946_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 9.865e-220 709.0
CMS1_k127_5467946_10 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000004814 168.0
CMS1_k127_5467946_12 PAS domain K03776 - - 0.00000000000000000000000000000000000002441 149.0
CMS1_k127_5467946_2 COGs COG3864 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 565.0
CMS1_k127_5467946_3 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 554.0
CMS1_k127_5467946_4 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 437.0
CMS1_k127_5467946_5 chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 314.0
CMS1_k127_5467946_6 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000001119 215.0
CMS1_k127_5467946_7 Cytochrome c mono- and diheme variants - - - 0.000000000000000000000000000000000000000000000000000000000001075 213.0
CMS1_k127_5467946_8 NAD(P)H dehydrogenase (quinone) activity - - - 0.0000000000000000000000000000000000000000000000000000002068 200.0
CMS1_k127_5467946_9 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000007785 183.0
CMS1_k127_5502999_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 6.613e-278 874.0
CMS1_k127_5502999_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 5.114e-220 689.0
CMS1_k127_5502999_10 membrane protein (DUF2078) K08982 - - 0.00000000004904 66.0
CMS1_k127_5502999_11 - - - - 0.000003223 51.0
CMS1_k127_5502999_2 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 436.0
CMS1_k127_5502999_3 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 401.0
CMS1_k127_5502999_4 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 314.0
CMS1_k127_5502999_5 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001405 239.0
CMS1_k127_5502999_6 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000001149 201.0
CMS1_k127_5502999_7 Transcriptional regulator K03892 - - 0.0000000000000000000000000000000000000000000002089 168.0
CMS1_k127_5502999_8 glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000005517 162.0
CMS1_k127_5503427_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1043.0
CMS1_k127_5503427_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 1.761e-265 830.0
CMS1_k127_5503427_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000004882 229.0
CMS1_k127_5503427_11 PFAM response regulator receiver K03407,K03413 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000007542 192.0
CMS1_k127_5503427_12 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002798 185.0
CMS1_k127_5503427_13 GGDEF domain K03413 - - 0.000000000000000000000000000000000000000000000583 168.0
CMS1_k127_5503427_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000001428 138.0
CMS1_k127_5503427_16 COG0835 Chemotaxis signal transduction protein - - - 0.00000000000000000001979 101.0
CMS1_k127_5503427_17 Heat shock 70 kDa protein K04043 - - 0.0000000000005237 68.0
CMS1_k127_5503427_19 Nitroreductase family - - - 0.00000109 51.0
CMS1_k127_5503427_2 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 482.0
CMS1_k127_5503427_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006662 420.0
CMS1_k127_5503427_4 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 379.0
CMS1_k127_5503427_5 NUBPL iron-transfer P-loop NTPase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 367.0
CMS1_k127_5503427_6 Signal transducing histidine kinase, homodimeric domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 389.0
CMS1_k127_5503427_7 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 334.0
CMS1_k127_5503427_8 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000131 256.0
CMS1_k127_5503427_9 PAS fold K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004063 248.0
CMS1_k127_5533833_0 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 533.0
CMS1_k127_5533833_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 473.0
CMS1_k127_5533833_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 428.0
CMS1_k127_5533833_3 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004274 235.0
CMS1_k127_5533833_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000008671 158.0
CMS1_k127_5533833_5 Evidence 4 Homologs of previously reported genes of K21440 - - 0.000000000000000000000000000000000000387 149.0
CMS1_k127_5533833_6 methylated-DNA-[protein]-cysteine S-methyltransferase activity K00567 - 2.1.1.63 0.0000000000000000000000000000003208 124.0
CMS1_k127_5564093_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 552.0
CMS1_k127_5564093_1 phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
CMS1_k127_5564093_2 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000003221 267.0
CMS1_k127_5564093_3 PFAM Cobinamide kinase cobinamide phosphate guanyltransferase K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000003099 209.0
CMS1_k127_5564093_4 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000001239 207.0
CMS1_k127_5564093_5 Periplasmic binding protein K02016 - - 0.0000000000000000000000003598 110.0
CMS1_k127_5566913_0 Chorismate mutase prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 531.0
CMS1_k127_5566913_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 523.0
CMS1_k127_5566913_2 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000003922 210.0
CMS1_k127_5568068_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.691e-212 671.0
CMS1_k127_5568068_1 Belongs to the DegT DnrJ EryC1 family K15895 - 2.6.1.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 489.0
CMS1_k127_5568068_10 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000002393 175.0
CMS1_k127_5568068_11 thioesterase K02614 - - 0.0000000000000000000000000000000000000000004843 162.0
CMS1_k127_5568068_12 Cytochrome c family protein - - - 0.00000000000000000000000000000000000003071 151.0
CMS1_k127_5568068_13 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000008426 109.0
CMS1_k127_5568068_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 445.0
CMS1_k127_5568068_3 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 435.0
CMS1_k127_5568068_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 381.0
CMS1_k127_5568068_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 345.0
CMS1_k127_5568068_6 cation diffusion facilitator family transporter K13283 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005385,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006829,GO:0006873,GO:0006875,GO:0006876,GO:0006882,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015086,GO:0015093,GO:0015291,GO:0015318,GO:0015341,GO:0015562,GO:0015684,GO:0015691,GO:0016020,GO:0019725,GO:0022804,GO:0022857,GO:0022883,GO:0022890,GO:0030001,GO:0030003,GO:0034220,GO:0034755,GO:0042592,GO:0042802,GO:0044464,GO:0046583,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055069,GO:0055073,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070574,GO:0070838,GO:0071577,GO:0071944,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1903874 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 342.0
CMS1_k127_5568068_7 hmm pf04305 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 314.0
CMS1_k127_5568068_8 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 306.0
CMS1_k127_5568068_9 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000005987 177.0
CMS1_k127_5576073_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1334.0
CMS1_k127_5576073_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1272.0
CMS1_k127_5576073_10 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 365.0
CMS1_k127_5576073_11 - - - - 0.000000000000000000000000000000000000000000000000001377 184.0
CMS1_k127_5576073_12 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000000000000008624 174.0
CMS1_k127_5576073_13 Branched-chain amino acid aminotransferase K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000001803 176.0
CMS1_k127_5576073_14 Lysozyme inhibitor LprI - - - 0.00000000000000000000000000000000006019 139.0
CMS1_k127_5576073_15 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000007615 117.0
CMS1_k127_5576073_16 Preprotein translocase K03210 - - 0.00000000000000000000005643 100.0
CMS1_k127_5576073_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 3.087e-230 723.0
CMS1_k127_5576073_3 ADP-ribosylglycohydrolase - - - 1.714e-195 613.0
CMS1_k127_5576073_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 496.0
CMS1_k127_5576073_5 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 464.0
CMS1_k127_5576073_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 461.0
CMS1_k127_5576073_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 449.0
CMS1_k127_5576073_8 apolipoprotein N-acyltransferase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 406.0
CMS1_k127_5576073_9 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 387.0
CMS1_k127_5592351_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1021.0
CMS1_k127_5592351_1 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 1.458e-213 679.0
CMS1_k127_5592351_11 - - - - 0.0000001197 55.0
CMS1_k127_5592351_12 Antibiotic biosynthesis monooxygenase - - - 0.0000003738 56.0
CMS1_k127_5592351_2 Cell division protein FtsI penicillin-binding protein K03587 - 3.4.16.4 1.305e-212 671.0
CMS1_k127_5592351_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 557.0
CMS1_k127_5592351_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 379.0
CMS1_k127_5592351_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 314.0
CMS1_k127_5592351_6 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 310.0
CMS1_k127_5592351_7 Belongs to the DegT DnrJ EryC1 family K15910 - 2.6.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 251.0
CMS1_k127_5592351_8 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000001858 91.0
CMS1_k127_5592351_9 esterase K07000 GO:0003674,GO:0003824,GO:0016787,GO:0016788 - 0.000000000000000006407 91.0
CMS1_k127_5601495_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.056e-305 946.0
CMS1_k127_5601495_1 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 9.177e-220 688.0
CMS1_k127_5601495_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000866 277.0
CMS1_k127_5601495_11 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006038 268.0
CMS1_k127_5601495_12 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000007356 218.0
CMS1_k127_5601495_13 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000002622 172.0
CMS1_k127_5601495_14 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000000000000000000000000006604 121.0
CMS1_k127_5601495_15 Flagellar hook protein flgE - - - 0.00000000000000000000000159 106.0
CMS1_k127_5601495_17 - - - - 0.0000000000000000000001331 99.0
CMS1_k127_5601495_18 - - - - 0.00000000000000000002106 94.0
CMS1_k127_5601495_19 - - - - 0.000000000000000001649 93.0
CMS1_k127_5601495_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 4.986e-200 626.0
CMS1_k127_5601495_3 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 574.0
CMS1_k127_5601495_4 Belongs to the flagella basal body rod proteins family K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 421.0
CMS1_k127_5601495_5 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 430.0
CMS1_k127_5601495_6 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 421.0
CMS1_k127_5601495_7 phage repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 341.0
CMS1_k127_5601495_8 flagellar basal body K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 331.0
CMS1_k127_5601495_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 287.0
CMS1_k127_5607319_0 MerR HTH family regulatory protein - - - 0.000000000000000000000000000000000000000008821 157.0
CMS1_k127_5607319_1 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000005689 135.0
CMS1_k127_5607319_2 - - - - 0.00000000000000000000000000001148 121.0
CMS1_k127_5607319_3 YHS domain - - - 0.000000000000000001844 88.0
CMS1_k127_5661959_0 Aminopeptidase I zinc metalloprotease (M18) K01267 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008270,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 537.0
CMS1_k127_5661959_1 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 516.0
CMS1_k127_5661959_2 Histidine kinase K02482,K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 430.0
CMS1_k127_5661959_3 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 366.0
CMS1_k127_5661959_4 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000004203 252.0
CMS1_k127_5661959_5 Retinoic acid induced 14 - GO:0001650,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0070013 - 0.000000000000000002248 93.0
CMS1_k127_5661959_6 - - - - 0.000000000000000002269 89.0
CMS1_k127_5661959_7 peptidyl-tyrosine sulfation - - - 0.00000002494 65.0
CMS1_k127_5678107_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1283.0
CMS1_k127_5678107_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 383.0
CMS1_k127_5678107_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000003738 167.0
CMS1_k127_5678107_3 peptidyl-tyrosine sulfation - - - 0.0000000000001755 78.0
CMS1_k127_5777594_0 Ribonuclease K12573 - - 4.437e-215 686.0
CMS1_k127_5777594_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 5.738e-214 666.0
CMS1_k127_5777594_10 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 414.0
CMS1_k127_5777594_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 360.0
CMS1_k127_5777594_12 PFAM EAL domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 368.0
CMS1_k127_5777594_13 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 363.0
CMS1_k127_5777594_14 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 351.0
CMS1_k127_5777594_15 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 334.0
CMS1_k127_5777594_16 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 299.0
CMS1_k127_5777594_17 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 292.0
CMS1_k127_5777594_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 286.0
CMS1_k127_5777594_19 DNA replication regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003333 267.0
CMS1_k127_5777594_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.009e-195 616.0
CMS1_k127_5777594_20 DNA processing protein K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002305 263.0
CMS1_k127_5777594_21 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000001928 239.0
CMS1_k127_5777594_22 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001016 238.0
CMS1_k127_5777594_23 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000001048 229.0
CMS1_k127_5777594_24 - - - - 0.00000000000000000000000000000000000000000000000003805 186.0
CMS1_k127_5777594_25 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000005916 184.0
CMS1_k127_5777594_26 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000000001124 166.0
CMS1_k127_5777594_27 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000001744 165.0
CMS1_k127_5777594_28 - - - - 0.00000000000000000000000000000000000000000002977 168.0
CMS1_k127_5777594_29 proteins homologs of microcin C7 resistance protein MccF - - - 0.0000000000000000000000000000000000000001261 156.0
CMS1_k127_5777594_3 phosphate transporter K03306 - - 1.128e-195 624.0
CMS1_k127_5777594_30 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000002953 144.0
CMS1_k127_5777594_31 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000005015 141.0
CMS1_k127_5777594_32 DNA-binding protein - - - 0.00000000000000000000000000005333 117.0
CMS1_k127_5777594_34 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000003161 119.0
CMS1_k127_5777594_35 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000004487 107.0
CMS1_k127_5777594_36 Ankyrin repeat K21440 GO:0006810,GO:0008150,GO:0016192,GO:0016197,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0098876,GO:1990126 - 0.00000000000000000000000321 117.0
CMS1_k127_5777594_37 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000003692 97.0
CMS1_k127_5777594_38 - - - - 0.000000000000003612 89.0
CMS1_k127_5777594_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 585.0
CMS1_k127_5777594_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 483.0
CMS1_k127_5777594_6 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 471.0
CMS1_k127_5777594_7 Belongs to the agmatine deiminase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 445.0
CMS1_k127_5777594_8 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 442.0
CMS1_k127_5777594_9 Flagellar Assembly Protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 431.0
CMS1_k127_5782128_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 9.782e-290 914.0
CMS1_k127_5782128_1 Acts as a magnesium transporter K06213 - - 4.872e-234 730.0
CMS1_k127_5782128_10 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 378.0
CMS1_k127_5782128_11 COG4775 Outer membrane protein protective antigen OMA87 K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 358.0
CMS1_k127_5782128_12 CorA-like Mg2 transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 319.0
CMS1_k127_5782128_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 291.0
CMS1_k127_5782128_14 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009434 252.0
CMS1_k127_5782128_15 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000002124 242.0
CMS1_k127_5782128_16 - - - - 0.00000000000000000000000000000000000000000000000000003549 198.0
CMS1_k127_5782128_17 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000000000001337 171.0
CMS1_k127_5782128_18 - - - - 0.000000000000000000000000000000000000000000001114 169.0
CMS1_k127_5782128_19 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000000000000002287 157.0
CMS1_k127_5782128_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.186e-194 612.0
CMS1_k127_5782128_20 Small-conductance mechano-sensitive channel - - - 0.00000000000000000000000000000000000004718 149.0
CMS1_k127_5782128_23 Phosphate-starvation-inducible E - - - 0.000002759 55.0
CMS1_k127_5782128_3 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 593.0
CMS1_k127_5782128_4 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 591.0
CMS1_k127_5782128_5 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 494.0
CMS1_k127_5782128_6 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 493.0
CMS1_k127_5782128_7 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 490.0
CMS1_k127_5782128_8 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 482.0
CMS1_k127_5782128_9 polyphosphate kinase K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 446.0
CMS1_k127_5790195_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.0 1125.0
CMS1_k127_5790195_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 3.581e-197 622.0
CMS1_k127_5790195_10 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000001845 196.0
CMS1_k127_5790195_11 ATPase or kinase K06925 - - 0.00000000000000000000000000000000000000000000209 170.0
CMS1_k127_5790195_12 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000001474 138.0
CMS1_k127_5790195_13 S4 domain protein - - - 0.000000000000000000000000000004441 120.0
CMS1_k127_5790195_2 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007543 604.0
CMS1_k127_5790195_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 466.0
CMS1_k127_5790195_4 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
CMS1_k127_5790195_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 378.0
CMS1_k127_5790195_6 ABC transporter, ATP-binding protein K01990,K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006709 379.0
CMS1_k127_5790195_7 tigr02757 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 306.0
CMS1_k127_5790195_8 UPF0313 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002957 251.0
CMS1_k127_5790195_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000226 212.0
CMS1_k127_5810887_0 Sh3 type 3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000008724 203.0
CMS1_k127_5968575_0 Two-component sensor histidine kinase response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 379.0
CMS1_k127_5981888_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 380.0
CMS1_k127_5981888_1 Tetratricopeptide repeat - - - 0.00000000000000000000000001497 126.0
CMS1_k127_5993264_0 Molecular chaperone. Has ATPase activity K04079 - - 5.338e-314 971.0
CMS1_k127_5993264_1 acetolactate synthase K01652 - 2.2.1.6 6.24e-311 958.0
CMS1_k127_5993264_10 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 497.0
CMS1_k127_5993264_11 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 408.0
CMS1_k127_5993264_12 forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 385.0
CMS1_k127_5993264_13 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 361.0
CMS1_k127_5993264_14 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 359.0
CMS1_k127_5993264_15 polyphosphate kinase K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 337.0
CMS1_k127_5993264_16 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 349.0
CMS1_k127_5993264_17 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 326.0
CMS1_k127_5993264_18 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 316.0
CMS1_k127_5993264_19 Peptidase A24 K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003125 280.0
CMS1_k127_5993264_2 Highly conserved protein containing a thioredoxin domain K06888 - - 2.248e-222 707.0
CMS1_k127_5993264_20 Ppx GppA K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003113 280.0
CMS1_k127_5993264_21 HAMP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001214 271.0
CMS1_k127_5993264_22 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000001477 249.0
CMS1_k127_5993264_23 cheY-homologous receiver domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000005959 250.0
CMS1_k127_5993264_24 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000207 229.0
CMS1_k127_5993264_25 CoA-binding protein K06929 - - 0.00000000000000000000000000000000000000000000000000000000000001069 218.0
CMS1_k127_5993264_26 HAMP domain - - - 0.00000000000000000000000000000000000000000000000000000000000001528 243.0
CMS1_k127_5993264_27 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000003225 207.0
CMS1_k127_5993264_28 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000002338 200.0
CMS1_k127_5993264_29 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000001485 133.0
CMS1_k127_5993264_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 4.965e-201 635.0
CMS1_k127_5993264_31 cheY-homologous receiver domain - - - 0.00000000000000000000000005108 111.0
CMS1_k127_5993264_32 response regulator, receiver K02479 - - 0.0000000000000000000000002215 113.0
CMS1_k127_5993264_33 cytochrome c class I - - - 0.0000000000000000000009198 102.0
CMS1_k127_5993264_34 protein involved in exopolysaccharide biosynthesis - - - 0.0000000000000001481 90.0
CMS1_k127_5993264_35 - - - - 0.0000000000003805 79.0
CMS1_k127_5993264_4 HI0933-like protein K07007 - - 3.273e-196 618.0
CMS1_k127_5993264_5 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 570.0
CMS1_k127_5993264_6 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 572.0
CMS1_k127_5993264_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 540.0
CMS1_k127_5993264_8 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 529.0
CMS1_k127_5993264_9 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 522.0
CMS1_k127_5999397_0 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 312.0
CMS1_k127_5999397_1 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000000000000000000000000001829 227.0
CMS1_k127_5999397_2 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000002317 196.0
CMS1_k127_5999397_3 - - - - 0.0000000000000000000000000000000003502 133.0
CMS1_k127_5999397_4 Fe-S metabolism associated domain protein K02426 - - 0.0000000000000000000000000000008183 128.0
CMS1_k127_5999397_5 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000009996 121.0
CMS1_k127_5999397_6 2'-5' RNA ligase K01975 - 3.1.4.58 0.0000000000000000000000000003684 120.0
CMS1_k127_6096196_0 TRAP transporter, DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 558.0
CMS1_k127_6096196_1 HIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 286.0
CMS1_k127_6096196_2 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.0000000000000000000000000000000000000000000000000004587 188.0
CMS1_k127_6096196_3 - - - - 0.0000000000000000000000000000000000000000000003277 169.0
CMS1_k127_6096196_4 Thiamine-binding protein - - - 0.0000000000000000000000000000000000000001091 153.0
CMS1_k127_6096196_5 Mur ligase middle domain K01929 - 6.3.2.10 0.000000000000000000000000000000000000252 141.0
CMS1_k127_6096196_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000008497 70.0
CMS1_k127_6096196_7 - - - - 0.000008095 54.0
CMS1_k127_6096196_8 - - - - 0.00005036 45.0
CMS1_k127_6145362_0 arginine decarboxylase K01585 - 4.1.1.19 5.819e-293 910.0
CMS1_k127_6145362_1 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 604.0
CMS1_k127_6145362_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 394.0
CMS1_k127_6145362_3 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 381.0
CMS1_k127_6145362_4 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001284 263.0
CMS1_k127_6145362_5 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000007052 242.0
CMS1_k127_6145362_6 acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000385 113.0
CMS1_k127_6145362_7 - - - - 0.0000000000000000000000000009203 113.0
CMS1_k127_739599_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1582.0
CMS1_k127_739599_1 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008545 419.0
CMS1_k127_739599_2 cation efflux system protein K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 394.0
CMS1_k127_739599_3 Receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 322.0
CMS1_k127_739599_4 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000105 258.0
CMS1_k127_739599_5 YtkA-like - - - 0.00000000000000000000000000000002542 130.0
CMS1_k127_747715_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 474.0
CMS1_k127_747715_1 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 345.0
CMS1_k127_747715_2 Translation initiation factor SUI1 K03113 - - 0.000000000000000000000000002596 114.0
CMS1_k127_747715_3 Protein of unknown function (DUF1653) - - - 0.00000000000000000000001888 100.0
CMS1_k127_760022_0 Belongs to the RtcB family K14415 - 6.5.1.3 2.256e-217 687.0
CMS1_k127_760022_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 592.0
CMS1_k127_760022_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000001237 219.0
CMS1_k127_760022_3 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000001515 194.0
CMS1_k127_760022_4 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000009739 169.0
CMS1_k127_760022_5 Rhodanese Homology Domain - - - 0.000000000000000000000000059 113.0
CMS1_k127_760022_6 UPF0313 protein - - - 0.000000000000000000000000179 106.0
CMS1_k127_760022_7 - - - - 0.00000000000000000035 90.0
CMS1_k127_760022_8 Domain of unknown function DUF302 - - - 0.0000001517 58.0
CMS1_k127_760022_9 methyltransferase - - - 0.0008282 42.0
CMS1_k127_8485_0 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase K15022 - 1.17.1.10 0.0 1182.0
CMS1_k127_8485_1 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1011.0
CMS1_k127_8485_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.829e-245 760.0
CMS1_k127_8485_3 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 492.0
CMS1_k127_8485_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 404.0
CMS1_k127_8485_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 332.0
CMS1_k127_8485_6 putative NADH-ubiquinone oxidoreductase chain E K00334 - 1.6.5.3 0.000000000000000000000000000000001773 129.0
CMS1_k127_8485_7 ATPase (AAA - - - 0.000000000000000000000000000007594 119.0
CMS1_k127_901922_0 Cytochrome c biogenesis protein - - - 0.0 1166.0
CMS1_k127_901922_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 5.325e-234 729.0
CMS1_k127_901922_10 abc transporter atp-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006733 280.0
CMS1_k127_901922_11 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004657 252.0
CMS1_k127_901922_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000005721 209.0
CMS1_k127_901922_13 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000000000000000000000007595 183.0
CMS1_k127_901922_14 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000002069 164.0
CMS1_k127_901922_15 - - - - 0.00000000000000000000000000000000000000002009 160.0
CMS1_k127_901922_16 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000005864 160.0
CMS1_k127_901922_17 - - - - 0.0000000000000000000002858 98.0
CMS1_k127_901922_18 thiamine biosynthesis protein ThiS K03154 - - 0.000000000000000002048 86.0
CMS1_k127_901922_19 - - - - 0.0000000000000008292 81.0
CMS1_k127_901922_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 7.677e-213 670.0
CMS1_k127_901922_20 transport system auxiliary component K18480 - - 0.00000000000001022 82.0
CMS1_k127_901922_21 Thioredoxin-like - - - 0.0000000003799 61.0
CMS1_k127_901922_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 593.0
CMS1_k127_901922_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 477.0
CMS1_k127_901922_5 Response regulator receiver K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 448.0
CMS1_k127_901922_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 412.0
CMS1_k127_901922_7 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 349.0
CMS1_k127_901922_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 330.0
CMS1_k127_901922_9 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 299.0
CMS1_k127_908982_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1039.0
CMS1_k127_908982_1 penicillin-binding protein K05515 - 3.4.16.4 3.473e-245 770.0
CMS1_k127_908982_10 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001474 267.0
CMS1_k127_908982_11 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001749 259.0
CMS1_k127_908982_12 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001854 242.0
CMS1_k127_908982_13 lytic murein transglycosylase K08309 - - 0.000000000000000000000000000000000000000000000000000000000000001193 222.0
CMS1_k127_908982_14 acetyltransferase K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000002303 211.0
CMS1_k127_908982_15 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000001125 177.0
CMS1_k127_908982_16 Lipopolysaccharide transport periplasmic protein lpta K09774 - - 0.0000000000000000000000000000000000000006177 153.0
CMS1_k127_908982_17 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000008698 122.0
CMS1_k127_908982_18 hmm pf01863 K07043 - - 0.0000000000000000000000003237 114.0
CMS1_k127_908982_19 - - - - 0.00000000000000000000004527 104.0
CMS1_k127_908982_2 GMC oxidoreductase K06151 - 1.1.99.3 7.001e-223 703.0
CMS1_k127_908982_20 - - - - 0.00000000000000000001636 97.0
CMS1_k127_908982_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 534.0
CMS1_k127_908982_4 K -dependent Na Ca exchanger K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 454.0
CMS1_k127_908982_5 Sodium calcium exchanger membrane K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 456.0
CMS1_k127_908982_6 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 443.0
CMS1_k127_908982_7 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 400.0
CMS1_k127_908982_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 367.0
CMS1_k127_908982_9 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 333.0
CMS1_k127_922421_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1005.0
CMS1_k127_922421_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 4.261e-224 709.0
CMS1_k127_922421_10 Phospholipase/Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 285.0
CMS1_k127_922421_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000353 273.0
CMS1_k127_922421_12 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003056 270.0
CMS1_k127_922421_13 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000003884 237.0
CMS1_k127_922421_14 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000006171 211.0
CMS1_k127_922421_15 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000127 204.0
CMS1_k127_922421_16 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.00000000000000000000000000000000000000000000000000002115 190.0
CMS1_k127_922421_17 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000000006696 184.0
CMS1_k127_922421_18 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000002866 132.0
CMS1_k127_922421_19 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000001105 121.0
CMS1_k127_922421_2 Fad-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 550.0
CMS1_k127_922421_20 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000008528 120.0
CMS1_k127_922421_21 - - - - 0.000000000000000000000000001232 116.0
CMS1_k127_922421_22 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000001406 84.0
CMS1_k127_922421_23 Protein of unknown function (DUF1425) - - - 0.00000002828 60.0
CMS1_k127_922421_24 AF0941-like - - - 0.000003562 53.0
CMS1_k127_922421_25 Protein of unknown function (DUF3313) - - - 0.00005115 53.0
CMS1_k127_922421_3 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 537.0
CMS1_k127_922421_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 511.0
CMS1_k127_922421_5 lytic murein transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 496.0
CMS1_k127_922421_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 405.0
CMS1_k127_922421_7 hydrolase, TatD K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 354.0
CMS1_k127_922421_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 304.0
CMS1_k127_922421_9 Imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 301.0
CMS1_k127_939382_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 3.079e-248 771.0
CMS1_k127_939382_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 370.0
CMS1_k127_939382_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000008803 176.0
CMS1_k127_939382_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000000000006043 119.0
CMS1_k127_941917_0 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 344.0
CMS1_k127_941917_1 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000000000000001045 174.0
CMS1_k127_941917_2 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000000000000007521 174.0
CMS1_k127_941917_3 Major facilitator superfamily K05820 - - 0.00000000000008062 73.0
CMS1_k127_943164_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1107.0
CMS1_k127_943164_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 1.204e-219 695.0
CMS1_k127_943164_10 Epimerase K07071 - - 0.00000005864 59.0
CMS1_k127_943164_2 Na Pi-cotransporter K03324 - - 1.266e-215 682.0
CMS1_k127_943164_3 ATP-binding protein K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 394.0
CMS1_k127_943164_4 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 343.0
CMS1_k127_943164_5 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007351 274.0
CMS1_k127_943164_6 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000001934 207.0
CMS1_k127_943164_7 ABC transporter permease K02018 - - 0.00000000000000000000000000000000000000000000001864 172.0
CMS1_k127_943164_8 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000002714 147.0
CMS1_k127_943164_9 Sulfate permease K03321 - - 0.0000000000000000000000000000000000002358 143.0
CMS1_k127_94754_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 452.0
CMS1_k127_94754_1 YjbR - - - 0.00000000000000000000000000000000000000001209 156.0
CMS1_k127_94754_2 - - - - 0.0000000000000000000000004058 108.0
CMS1_k127_960334_0 TonB-dependent copper receptor K02014 - - 2.822e-236 748.0
CMS1_k127_960334_1 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001325 284.0
CMS1_k127_960334_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000001334 76.0
CMS1_k127_962178_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 425.0
CMS1_k127_962178_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 403.0
CMS1_k127_962178_2 Phosphoesterase K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000001719 224.0
CMS1_k127_964681_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K03581 - 3.1.11.5 9.427e-276 867.0
CMS1_k127_964681_1 Diguanylate cyclase (GGDEF domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 300.0
CMS1_k127_964681_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000001327 175.0
CMS1_k127_964681_3 Protein of unknown function DUF86 - - - 0.000000000000003219 75.0
CMS1_k127_964681_4 TIGRFAM outer membrane insertion C-terminal signal - - - 0.00000000000004522 79.0