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Overview

ID MAG00376
Name CMS1_bin.66
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Campylobacterota
Class Campylobacteria
Order Campylobacterales
Family Sulfurimonadaceae
Genus Sulfurimonas
Species
Assembly information
Completeness (%) 98.63
Contamination (%) 0.87
GC content (%) 36.0
N50 (bp) 12,714
Genome size (bp) 2,090,615

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2084

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1010263_0 N-terminal phage replisome organiser (Phage_rep_org_N) - - - 0.000000000000000000000000000000000000003267 157.0
CMS1_k127_1013547_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 9.19e-206 644.0
CMS1_k127_1013547_1 molybdopterin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 375.0
CMS1_k127_1020796_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1285.0
CMS1_k127_1020796_1 COG0402 Cytosine deaminase and related metal-dependent K20810 - 3.5.4.40 2.833e-220 687.0
CMS1_k127_1020796_10 Formylmethanofuran dehydrogenase, subunit e - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 325.0
CMS1_k127_1020796_11 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 289.0
CMS1_k127_1020796_12 COG1214 Inactive homolog of metal-dependent proteases - - - 0.0000000000000000000000000000000000000000000000000000000000000572 216.0
CMS1_k127_1020796_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000006396 191.0
CMS1_k127_1020796_14 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000002826 157.0
CMS1_k127_1020796_15 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000006381 86.0
CMS1_k127_1020796_16 nucleic-acid-binding protein implicated in transcription termination - - - 0.0000000000004171 72.0
CMS1_k127_1020796_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 608.0
CMS1_k127_1020796_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 547.0
CMS1_k127_1020796_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 523.0
CMS1_k127_1020796_5 riboflavin biosynthesis protein K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 496.0
CMS1_k127_1020796_6 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 457.0
CMS1_k127_1020796_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 431.0
CMS1_k127_1020796_8 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 379.0
CMS1_k127_104162_0 hydrogenase (NiFe) small subunit HydA K05927 - 1.12.5.1 0.0 1272.0
CMS1_k127_104162_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922 - 1.12.5.1 2.056e-303 936.0
CMS1_k127_104162_2 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000000000001703 160.0
CMS1_k127_104162_3 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000006317 146.0
CMS1_k127_106784_0 COG4886 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 574.0
CMS1_k127_106784_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008206 503.0
CMS1_k127_106784_2 TrkA-N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 317.0
CMS1_k127_106784_3 SPTR Addiction module toxin, RelE StbE family K06218 - - 0.000000000000000003354 86.0
CMS1_k127_1077975_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1697.0
CMS1_k127_1077975_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1520.0
CMS1_k127_1077975_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 474.0
CMS1_k127_1077975_11 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 444.0
CMS1_k127_1077975_12 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0003674,GO:0005488,GO:0005515,GO:0042802 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 423.0
CMS1_k127_1077975_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 383.0
CMS1_k127_1077975_14 involved in molybdopterin and thiamine biosynthesis family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 321.0
CMS1_k127_1077975_15 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001764 252.0
CMS1_k127_1077975_16 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000000000000000000009376 214.0
CMS1_k127_1077975_17 - - - - 0.000000000000000000000000000000000000000000000000000000006604 200.0
CMS1_k127_1077975_18 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000138 169.0
CMS1_k127_1077975_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.711e-275 854.0
CMS1_k127_1077975_20 - - - - 0.0000000000000000000000000001726 117.0
CMS1_k127_1077975_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.282e-271 842.0
CMS1_k127_1077975_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.627e-261 811.0
CMS1_k127_1077975_5 Diguanylate cyclase - - - 1.377e-200 636.0
CMS1_k127_1077975_6 Histidine kinase - - - 3.829e-198 627.0
CMS1_k127_1077975_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 537.0
CMS1_k127_1077975_8 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 501.0
CMS1_k127_1077975_9 metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 483.0
CMS1_k127_1089572_0 Aminotransferase, class I K14155 - 4.4.1.8 9.578e-210 657.0
CMS1_k127_1089572_1 PFAM dUTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 388.0
CMS1_k127_1089572_2 ABC transporter, ATP-binding protein K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 301.0
CMS1_k127_1089572_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000000000000000000000006801 235.0
CMS1_k127_1089572_4 cofactor binding K09979 - - 0.0000000000000000000000000000000000000000000000000000000000000279 217.0
CMS1_k127_1089572_5 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000577 113.0
CMS1_k127_1089572_6 - - - - 0.0000000000000000000001039 98.0
CMS1_k127_1096530_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1667.0
CMS1_k127_1096530_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1156.0
CMS1_k127_1096530_10 Abc transporter K06158 - - 1.382e-239 745.0
CMS1_k127_1096530_11 transporter - - - 3.738e-235 732.0
CMS1_k127_1096530_12 Belongs to the CarA family K01956 - 6.3.5.5 1.021e-213 667.0
CMS1_k127_1096530_13 Aminotransferase - - - 1.919e-203 636.0
CMS1_k127_1096530_14 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 1.779e-198 624.0
CMS1_k127_1096530_15 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 584.0
CMS1_k127_1096530_16 Archaea bacterial proteins of unknown function K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 506.0
CMS1_k127_1096530_17 cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 464.0
CMS1_k127_1096530_18 COG1538 Outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 463.0
CMS1_k127_1096530_19 PFAM tRNA synthetase class II (G H P and S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 456.0
CMS1_k127_1096530_2 RNA binding S1 domain protein K06959 - - 0.0 1139.0
CMS1_k127_1096530_20 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 428.0
CMS1_k127_1096530_21 cation efflux system protein K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 428.0
CMS1_k127_1096530_22 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 410.0
CMS1_k127_1096530_23 chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 399.0
CMS1_k127_1096530_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 352.0
CMS1_k127_1096530_25 Leucyl/phenylalanyl-tRNA protein transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
CMS1_k127_1096530_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 343.0
CMS1_k127_1096530_27 protein conserved in bacteria K09804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 327.0
CMS1_k127_1096530_28 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 324.0
CMS1_k127_1096530_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 309.0
CMS1_k127_1096530_3 Class II Aldolase and Adducin N-terminal domain - - - 0.0 1109.0
CMS1_k127_1096530_30 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 299.0
CMS1_k127_1096530_31 PFAM glutaredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002017 279.0
CMS1_k127_1096530_32 PDP protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006225 240.0
CMS1_k127_1096530_33 FixH - - - 0.000000000000000000000000000000000000000000000000000000000000000003263 229.0
CMS1_k127_1096530_34 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000001698 220.0
CMS1_k127_1096530_36 YtkA-like - - - 0.0000000000000000000000000000000000000000000000000003012 186.0
CMS1_k127_1096530_37 cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000001167 179.0
CMS1_k127_1096530_38 Flagellar FliJ protein - - - 0.000000000000000000000000000000000000000000111 162.0
CMS1_k127_1096530_39 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000001769 157.0
CMS1_k127_1096530_4 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1092.0
CMS1_k127_1096530_40 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000004017 153.0
CMS1_k127_1096530_41 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.0000000000000000000000000001052 115.0
CMS1_k127_1096530_42 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000001203 115.0
CMS1_k127_1096530_43 - - - - 0.00000000000000000000000001206 111.0
CMS1_k127_1096530_44 nucleotidyltransferase activity K07075 - - 0.0000000000000000000000001322 108.0
CMS1_k127_1096530_45 SCO1/SenC K07152 - - 0.000000000000000000000000921 111.0
CMS1_k127_1096530_47 Protein of unknown function DUF86 - - - 0.000000000000000001767 86.0
CMS1_k127_1096530_48 - - - - 0.0000000181 55.0
CMS1_k127_1096530_49 Protein of unknown function DUF86 - - - 0.0000003915 55.0
CMS1_k127_1096530_5 COG3893 inactivated superfamily I helicase - - - 0.0 1084.0
CMS1_k127_1096530_51 - - - - 0.00001519 55.0
CMS1_k127_1096530_6 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.297e-314 966.0
CMS1_k127_1096530_7 abc transporter atp-binding protein K06147,K06148 - - 2.149e-290 900.0
CMS1_k127_1096530_8 Putative diguanylate phosphodiesterase - - - 1.204e-289 900.0
CMS1_k127_1096530_9 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.188e-255 789.0
CMS1_k127_1103793_0 Diguanylate cyclase K20959,K20964 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032879,GO:0040012,GO:0040013,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051270,GO:0051271,GO:0065007,GO:0071944,GO:1902021,GO:1902201,GO:2000145,GO:2000146 2.7.7.65,3.1.4.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 358.0
CMS1_k127_1103793_1 HAMP domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001169 276.0
CMS1_k127_1103793_2 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000005731 175.0
CMS1_k127_1103793_3 Histidine kinase K13040 - 2.7.13.3 0.0000000000000000000000000000000001156 152.0
CMS1_k127_1103793_4 response regulator - - - 0.000000000000000000000002057 106.0
CMS1_k127_1103793_5 Domain of unknown function (DUF4154) - - - 0.000000000000000000001128 101.0
CMS1_k127_1108436_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 - 2.7.7.6 0.0 2797.0
CMS1_k127_1108436_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2092.0
CMS1_k127_1108436_10 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009176 255.0
CMS1_k127_1108436_11 PFAM FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007385 249.0
CMS1_k127_1108436_12 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009057 243.0
CMS1_k127_1108436_13 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005388 245.0
CMS1_k127_1108436_14 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000000003541 207.0
CMS1_k127_1108436_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000004522 107.0
CMS1_k127_1108436_16 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000003866 87.0
CMS1_k127_1108436_18 - - - - 0.00002354 48.0
CMS1_k127_1108436_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0 1050.0
CMS1_k127_1108436_3 cAMP phosphodiesterases class-II - - - 1.181e-308 956.0
CMS1_k127_1108436_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.075e-250 775.0
CMS1_k127_1108436_5 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 411.0
CMS1_k127_1108436_6 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 392.0
CMS1_k127_1108436_7 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 329.0
CMS1_k127_1108436_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 295.0
CMS1_k127_1108436_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000879 271.0
CMS1_k127_1163148_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 4.124e-287 887.0
CMS1_k127_1163148_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.195e-238 745.0
CMS1_k127_1163148_10 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 389.0
CMS1_k127_1163148_11 Ecdysteroid kinase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 378.0
CMS1_k127_1163148_12 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 375.0
CMS1_k127_1163148_13 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 370.0
CMS1_k127_1163148_14 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 361.0
CMS1_k127_1163148_15 Methyltransferase domain K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 351.0
CMS1_k127_1163148_16 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 327.0
CMS1_k127_1163148_17 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 312.0
CMS1_k127_1163148_18 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007442 282.0
CMS1_k127_1163148_19 SprT-like family - - - 0.000000000000000000000000000000000000000000000000000000000004757 211.0
CMS1_k127_1163148_2 STAS domain K03321 - - 1.968e-205 650.0
CMS1_k127_1163148_20 Bacterial regulatory proteins, tetR family K03577 - - 0.0000000000000000000000000000000000000000000000001351 180.0
CMS1_k127_1163148_22 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000000000000000000001023 155.0
CMS1_k127_1163148_23 sensory box protein response regulator - - - 0.0000000000000000000001355 110.0
CMS1_k127_1163148_24 MOSC domain - - - 0.000000000000003979 75.0
CMS1_k127_1163148_26 Transposase - - - 0.0000004986 51.0
CMS1_k127_1163148_3 glucose galactose transporter K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 616.0
CMS1_k127_1163148_4 Glycosyl hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 492.0
CMS1_k127_1163148_5 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 471.0
CMS1_k127_1163148_6 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 473.0
CMS1_k127_1163148_7 of the HAD superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 457.0
CMS1_k127_1163148_8 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 444.0
CMS1_k127_1163148_9 Abc transporter K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 398.0
CMS1_k127_118157_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 6.439e-225 699.0
CMS1_k127_118157_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 565.0
CMS1_k127_118157_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 535.0
CMS1_k127_118157_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000005699 259.0
CMS1_k127_118157_4 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000006712 192.0
CMS1_k127_118157_5 metal-binding, possibly nucleic acid-binding protein - - - 0.00000000000000000000000000000000000000000000000000001262 190.0
CMS1_k127_118157_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000002449 105.0
CMS1_k127_118306_0 transporter K14445 - - 2.683e-215 676.0
CMS1_k127_118306_1 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000002101 235.0
CMS1_k127_118306_2 Stress responsive A B Barrel Domain - - - 0.0000000000000000000000000000000000001288 143.0
CMS1_k127_118306_3 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000007206 70.0
CMS1_k127_1187088_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02397 - - 2.645e-275 862.0
CMS1_k127_1187088_1 Belongs to the FtsK SpoIIIE SftA family K03466 - - 0.000000000000000000000000000000000000000000000000347 178.0
CMS1_k127_122250_0 Acts as a magnesium transporter K06213 - - 3.769e-221 692.0
CMS1_k127_122250_1 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 512.0
CMS1_k127_122250_2 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001722 247.0
CMS1_k127_122250_3 WD-40 repeat protein - - - 0.00002775 53.0
CMS1_k127_1253236_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0000018,GO:0008150,GO:0009892,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0080090 - 0.0 1181.0
CMS1_k127_1253236_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.633e-259 802.0
CMS1_k127_1253236_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 261.0
CMS1_k127_1253236_3 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000297 267.0
CMS1_k127_1253236_4 COG0436 Aspartate tyrosine aromatic aminotransferase - - - 0.000000000000000000000000000000000001995 138.0
CMS1_k127_1292421_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1092.0
CMS1_k127_1292421_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 549.0
CMS1_k127_1292421_2 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 444.0
CMS1_k127_1292421_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 431.0
CMS1_k127_1292421_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 384.0
CMS1_k127_1292421_5 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000009381 250.0
CMS1_k127_1292421_6 Chemotaxis protein cheY K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000165 231.0
CMS1_k127_1292421_7 General glycosylation pathway protein - - - 0.0000000000000000605 80.0
CMS1_k127_1294608_0 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 475.0
CMS1_k127_1294608_1 EAL domain K20964 GO:0003674,GO:0003824,GO:0008081,GO:0016787,GO:0016788,GO:0042578,GO:0071111 3.1.4.52 0.0000000000000000000001151 108.0
CMS1_k127_1307773_0 Flagellar Assembly Protein A - - - 4.786e-209 663.0
CMS1_k127_1307773_1 fructose-bisphosphate aldolase K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 371.0
CMS1_k127_1326441_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1459.0
CMS1_k127_1326441_1 chemotaxis protein K03406 - - 4.747e-286 891.0
CMS1_k127_1326441_10 transcriptional regulator K16137,K18476 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 484.0
CMS1_k127_1326441_11 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 475.0
CMS1_k127_1326441_12 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 451.0
CMS1_k127_1326441_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 437.0
CMS1_k127_1326441_14 COG0433 Predicted ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 404.0
CMS1_k127_1326441_15 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 391.0
CMS1_k127_1326441_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 291.0
CMS1_k127_1326441_17 Protein of unknown function (DUF3800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002097 265.0
CMS1_k127_1326441_18 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000000004315 214.0
CMS1_k127_1326441_2 amino acid carrier protein K03310 - - 9.955e-243 756.0
CMS1_k127_1326441_20 - - - - 0.0000000000000000000000000000000000002951 143.0
CMS1_k127_1326441_22 - - - - 0.00000000000000000000000007187 112.0
CMS1_k127_1326441_23 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000007814 65.0
CMS1_k127_1326441_24 - - - - 0.00000004085 55.0
CMS1_k127_1326441_26 - - - - 0.0000201 55.0
CMS1_k127_1326441_3 Stage II sporulation protein E (SpoIIE) - - - 4.321e-224 707.0
CMS1_k127_1326441_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 4.637e-206 649.0
CMS1_k127_1326441_5 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 3.559e-205 644.0
CMS1_k127_1326441_6 Protein of unknown function (DUF3365) - - - 1.786e-196 626.0
CMS1_k127_1326441_7 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 560.0
CMS1_k127_1326441_8 Cytochrome K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 544.0
CMS1_k127_1326441_9 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 492.0
CMS1_k127_1341340_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1480.0
CMS1_k127_1341340_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1274.0
CMS1_k127_1341340_10 nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 295.0
CMS1_k127_1341340_11 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002645 291.0
CMS1_k127_1341340_12 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004982 275.0
CMS1_k127_1341340_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001295 237.0
CMS1_k127_1341340_14 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003763 236.0
CMS1_k127_1341340_15 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000017 223.0
CMS1_k127_1341340_16 - - - - 0.000000000000000000000000000000000000000000000000001632 196.0
CMS1_k127_1341340_17 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000000000002326 171.0
CMS1_k127_1341340_18 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000002628 55.0
CMS1_k127_1341340_2 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1075.0
CMS1_k127_1341340_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 9.14e-269 831.0
CMS1_k127_1341340_4 GGDEF domain - - - 1.231e-210 670.0
CMS1_k127_1341340_5 8-amino-7-oxononanoate synthase K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 569.0
CMS1_k127_1341340_6 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 345.0
CMS1_k127_1341340_7 abc transporter atp-binding protein K02031,K15587 - 3.6.3.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 327.0
CMS1_k127_1341340_8 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 325.0
CMS1_k127_1341340_9 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 311.0
CMS1_k127_1402373_0 - - - - 4.117e-211 678.0
CMS1_k127_1402373_1 Belongs to the DEAD box helicase family K05592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.6.4.13 0.0000000000003643 71.0
CMS1_k127_1410663_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.912e-224 698.0
CMS1_k127_1410663_1 OmpA family - - - 8.795e-216 683.0
CMS1_k127_1410663_10 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000003141 170.0
CMS1_k127_1410663_11 - - - - 0.000000000000000000000000000000000001438 141.0
CMS1_k127_1410663_12 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000004319 138.0
CMS1_k127_1410663_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000000000005987 138.0
CMS1_k127_1410663_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 556.0
CMS1_k127_1410663_3 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 526.0
CMS1_k127_1410663_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 438.0
CMS1_k127_1410663_5 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 385.0
CMS1_k127_1410663_6 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 375.0
CMS1_k127_1410663_7 DNA processing protein K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 368.0
CMS1_k127_1410663_8 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001218 268.0
CMS1_k127_1410663_9 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000005354 221.0
CMS1_k127_1512273_0 chemotaxis protein K03407 - 2.7.13.3 7.176e-295 925.0
CMS1_k127_1512273_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 567.0
CMS1_k127_1512273_2 chemotaxis protein K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 512.0
CMS1_k127_1512273_3 protein conserved in bacteria K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 331.0
CMS1_k127_1512273_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 320.0
CMS1_k127_1512273_5 chemotaxis protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 281.0
CMS1_k127_1512273_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007126 274.0
CMS1_k127_1512273_8 involved in molybdopterin and thiamine biosynthesis family 1 - - - 0.000000000000000003056 86.0
CMS1_k127_1528033_0 diguanylate cyclase - - - 1.223e-262 822.0
CMS1_k127_1528033_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 300.0
CMS1_k127_1528033_2 - - - - 0.000000001079 63.0
CMS1_k127_1537384_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1768.0
CMS1_k127_1537384_1 dehydrogenase K08325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 590.0
CMS1_k127_1537384_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 346.0
CMS1_k127_1537384_3 flagellar - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 346.0
CMS1_k127_1537384_5 flagellar motor switch protein K02417 - - 0.000000000000000000000000000000000000000000000000000001038 193.0
CMS1_k127_1537384_6 - - - - 0.0000000000000000000000000000000000000000000000000005666 186.0
CMS1_k127_1537384_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000002334 126.0
CMS1_k127_1537384_8 Protein of unknown function (DUF3570) - - - 0.000000000000000000004524 106.0
CMS1_k127_154371_0 Flagellar Assembly Protein A - - - 3.355e-266 832.0
CMS1_k127_154371_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 574.0
CMS1_k127_154371_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000309 274.0
CMS1_k127_154371_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000003738 203.0
CMS1_k127_1544302_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 336.0
CMS1_k127_1544302_1 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000003385 215.0
CMS1_k127_1544302_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000003718 189.0
CMS1_k127_1544302_3 Diguanylate cyclase - - - 0.000000000000000739 78.0
CMS1_k127_1544302_4 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000001825 77.0
CMS1_k127_1571151_0 ABC transporter, ATP-binding protein K15738 - - 0.0 1123.0
CMS1_k127_1571151_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 2.944e-296 912.0
CMS1_k127_1571151_10 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 384.0
CMS1_k127_1571151_11 Domain of unknown function (DUF1882) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 355.0
CMS1_k127_1571151_12 Belongs to the Fur family K03711 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 284.0
CMS1_k127_1571151_13 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 265.0
CMS1_k127_1571151_14 Cell division protein K03591,K03749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008409 258.0
CMS1_k127_1571151_15 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000000000000001492 164.0
CMS1_k127_1571151_16 - - - - 0.0000000000000000000000000000000000000002657 151.0
CMS1_k127_1571151_17 DNA-binding protein VF530 - - - 0.000000000000000000000000000000000000005646 146.0
CMS1_k127_1571151_18 - - - - 0.0000000002945 62.0
CMS1_k127_1571151_2 Molecular chaperone. Has ATPase activity K04079 - - 4.512e-294 906.0
CMS1_k127_1571151_3 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 1.345e-273 844.0
CMS1_k127_1571151_4 anthranilate synthase component K01657 - 4.1.3.27 4.835e-268 829.0
CMS1_k127_1571151_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 2.741e-265 818.0
CMS1_k127_1571151_6 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 2.479e-263 830.0
CMS1_k127_1571151_7 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007329 587.0
CMS1_k127_1571151_8 hydrogenase expression formation protein K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 509.0
CMS1_k127_1571151_9 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 404.0
CMS1_k127_1574840_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 515.0
CMS1_k127_1574840_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009192 228.0
CMS1_k127_1574840_2 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.0000000000000000000000000000000000000000000000000000000000000002251 224.0
CMS1_k127_1574840_3 WxcM-like, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000004391 201.0
CMS1_k127_1574840_4 transferase activity, transferring glycosyl groups K09691 - - 0.00000000000000000000000000000001117 133.0
CMS1_k127_1576244_0 Belongs to the AAA ATPase family - - - 4.983e-227 710.0
CMS1_k127_1598897_0 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002341 267.0
CMS1_k127_1598897_1 YceI-like domain - - - 0.00000000000000000000000000000000000000000000004701 171.0
CMS1_k127_1598897_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000001268 126.0
CMS1_k127_1642010_0 arginine decarboxylase K01585 - 4.1.1.19 0.0 1122.0
CMS1_k127_1642010_1 COGs COG0069 Glutamate synthase domain 2 - - - 2.126e-311 960.0
CMS1_k127_1642010_10 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 329.0
CMS1_k127_1642010_11 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 312.0
CMS1_k127_1642010_12 Chaperone for flagella basal body P-ring formation K02386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
CMS1_k127_1642010_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001515 259.0
CMS1_k127_1642010_14 GtrA-like protein - - - 0.000000000000000000000000000000000000000000000000000000001477 202.0
CMS1_k127_1642010_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 2.589e-226 704.0
CMS1_k127_1642010_3 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 432.0
CMS1_k127_1642010_4 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 402.0
CMS1_k127_1642010_5 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 386.0
CMS1_k127_1642010_6 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 366.0
CMS1_k127_1642010_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 368.0
CMS1_k127_1642010_8 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 328.0
CMS1_k127_1642010_9 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 317.0
CMS1_k127_1647095_0 cytochrome complex assembly - - - 7.04e-307 970.0
CMS1_k127_1647095_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 2.372e-214 685.0
CMS1_k127_1647095_2 NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001371 289.0
CMS1_k127_1647095_3 Sporulation related domain - - - 0.000000000000000000000000000001913 138.0
CMS1_k127_1647095_4 - - - - 0.00000000000000229 83.0
CMS1_k127_1647095_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00001262 49.0
CMS1_k127_1649892_0 NUBPL iron-transfer P-loop NTPase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 459.0
CMS1_k127_1649892_1 cheY-homologous receiver domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 314.0
CMS1_k127_1649892_2 Transcriptional regulatory protein, C terminal K07670 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016310,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000001601 61.0
CMS1_k127_165548_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 7.564e-243 755.0
CMS1_k127_165548_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 2.96e-203 635.0
CMS1_k127_165548_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 413.0
CMS1_k127_165548_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 329.0
CMS1_k127_165548_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 285.0
CMS1_k127_165548_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000004515 254.0
CMS1_k127_165548_6 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000000000005164 150.0
CMS1_k127_1656295_0 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 306.0
CMS1_k127_1656295_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
CMS1_k127_1656295_2 - - - - 0.00000000000000000000000000000000000000000000002922 170.0
CMS1_k127_1698091_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.486e-298 919.0
CMS1_k127_1698091_1 Belongs to the SEDS family K03588 - - 2.821e-210 657.0
CMS1_k127_1698091_10 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 461.0
CMS1_k127_1698091_11 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 444.0
CMS1_k127_1698091_12 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 436.0
CMS1_k127_1698091_13 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 432.0
CMS1_k127_1698091_14 Flagellar biosynthetic protein fliR K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 403.0
CMS1_k127_1698091_15 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 371.0
CMS1_k127_1698091_16 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 362.0
CMS1_k127_1698091_17 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 359.0
CMS1_k127_1698091_18 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 344.0
CMS1_k127_1698091_19 abc transporter atp-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 335.0
CMS1_k127_1698091_2 COG1252 NADH dehydrogenase FAD-containing subunit K03885 - 1.6.99.3 1.322e-195 616.0
CMS1_k127_1698091_20 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 328.0
CMS1_k127_1698091_21 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 303.0
CMS1_k127_1698091_22 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 301.0
CMS1_k127_1698091_23 N-Acetylmuramoyl-L-alanine amidase K01207,K01447,K11066 - 3.2.1.52,3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 302.0
CMS1_k127_1698091_24 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000126 278.0
CMS1_k127_1698091_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002939 271.0
CMS1_k127_1698091_26 RESPONSE REGULATOR receiver K07288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000113 284.0
CMS1_k127_1698091_27 COGs COG3786 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008031 267.0
CMS1_k127_1698091_28 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001521 257.0
CMS1_k127_1698091_29 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001416 254.0
CMS1_k127_1698091_3 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 598.0
CMS1_k127_1698091_30 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000000000000000000000000000001954 226.0
CMS1_k127_1698091_31 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000000000000000002846 183.0
CMS1_k127_1698091_32 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000000000002936 126.0
CMS1_k127_1698091_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 579.0
CMS1_k127_1698091_5 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 584.0
CMS1_k127_1698091_6 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 564.0
CMS1_k127_1698091_7 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 532.0
CMS1_k127_1698091_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 510.0
CMS1_k127_1698091_9 4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 467.0
CMS1_k127_1728212_0 acid membrane antigen A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 495.0
CMS1_k127_1728212_1 lipid a biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 440.0
CMS1_k127_1743436_0 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 525.0
CMS1_k127_1743436_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 293.0
CMS1_k127_1743436_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000002378 166.0
CMS1_k127_1743436_3 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000001984 121.0
CMS1_k127_1746054_0 Hpt sensor hybrid histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 332.0
CMS1_k127_1746054_1 fructose-bisphosphate aldolase K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007249 269.0
CMS1_k127_1798274_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 3.289e-247 766.0
CMS1_k127_1798274_1 Belongs to the heme-copper respiratory oxidase family - - - 4.851e-205 645.0
CMS1_k127_1798274_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000001279 263.0
CMS1_k127_1798274_3 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008302 241.0
CMS1_k127_1798274_4 Membrane - - - 0.00000000000000000000000000000000000000000000000000002054 192.0
CMS1_k127_1798274_5 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000383 187.0
CMS1_k127_1798274_6 Bacteriophage abortive infection AbiH - - - 0.000000000000000000000000000000000000001089 156.0
CMS1_k127_1798274_7 4Fe-4S ferredoxin - - - 0.000000000000000000000000000000000000005121 145.0
CMS1_k127_181282_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 5.328e-256 792.0
CMS1_k127_181282_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.085e-249 773.0
CMS1_k127_181282_10 Belongs to the 'phage' integrase family K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 406.0
CMS1_k127_181282_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 389.0
CMS1_k127_181282_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 359.0
CMS1_k127_181282_13 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 300.0
CMS1_k127_181282_14 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 291.0
CMS1_k127_181282_15 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000321 271.0
CMS1_k127_181282_16 PFAM Fimbrial assembly family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004839 250.0
CMS1_k127_181282_17 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001735 263.0
CMS1_k127_181282_18 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003663 241.0
CMS1_k127_181282_19 - - - - 0.00000000000000000000000000000000000000000000000000000000008403 209.0
CMS1_k127_181282_2 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 5.585e-230 719.0
CMS1_k127_181282_20 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000005274 216.0
CMS1_k127_181282_21 - - - - 0.000000000000000000000000000000000000001935 147.0
CMS1_k127_181282_22 response regulator K02483 - - 0.0000000000000000000000000008997 112.0
CMS1_k127_181282_23 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000007442 126.0
CMS1_k127_181282_24 - - - - 0.000000000000000000000004459 107.0
CMS1_k127_181282_25 negative regulation of ribosome biogenesis K00969,K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 0.00000000000000000000004076 102.0
CMS1_k127_181282_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.637e-229 713.0
CMS1_k127_181282_4 Histidine kinase K02484 - 2.7.13.3 4.04e-219 685.0
CMS1_k127_181282_5 Participates in both transcription termination and antitermination K02600 - - 2.039e-210 657.0
CMS1_k127_181282_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.355e-196 615.0
CMS1_k127_181282_7 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 558.0
CMS1_k127_181282_8 ABC transporter permease K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 534.0
CMS1_k127_181282_9 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901576 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 518.0
CMS1_k127_1834568_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 597.0
CMS1_k127_1834568_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 518.0
CMS1_k127_1834568_10 Histidine kinase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000004034 204.0
CMS1_k127_1834568_11 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000002797 202.0
CMS1_k127_1834568_12 two-component sensor histidine kinase - - - 0.00000000000000000000000000002857 124.0
CMS1_k127_1834568_13 phosphorelay signal transduction system - - - 0.0000000000000000000000000004002 122.0
CMS1_k127_1834568_14 - - - - 0.0000000000000000000000000005024 114.0
CMS1_k127_1834568_16 serine-type peptidase activity K06889,K07214 - - 0.00000003015 64.0
CMS1_k127_1834568_2 Two-component sensor histidine kinase response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 469.0
CMS1_k127_1834568_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 436.0
CMS1_k127_1834568_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 416.0
CMS1_k127_1834568_5 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 439.0
CMS1_k127_1834568_6 Two-component sensor histidine kinase response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 388.0
CMS1_k127_1834568_7 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009907 270.0
CMS1_k127_1834568_8 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005564 262.0
CMS1_k127_1834568_9 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001909 254.0
CMS1_k127_1880819_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.94e-218 682.0
CMS1_k127_1880819_1 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 619.0
CMS1_k127_1880819_2 Two-component sensor histidine kinase response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 337.0
CMS1_k127_1880819_3 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003066 245.0
CMS1_k127_1922537_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0 1398.0
CMS1_k127_1922537_1 Hpt sensor hybrid histidine kinase - - - 0.0 1279.0
CMS1_k127_1922537_10 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 367.0
CMS1_k127_1922537_11 abc transporter atp-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 323.0
CMS1_k127_1922537_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 325.0
CMS1_k127_1922537_13 Belongs to the 'phage' integrase family K14059 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 311.0
CMS1_k127_1922537_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003087 254.0
CMS1_k127_1922537_15 Biopolymer transporter ExbB K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000004809 230.0
CMS1_k127_1922537_16 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000004413 223.0
CMS1_k127_1922537_17 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000452 203.0
CMS1_k127_1922537_18 biopolymer transport protein K03559 - - 0.00000000000000000000000000000000000000000000000000000009398 197.0
CMS1_k127_1922537_19 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000001519 181.0
CMS1_k127_1922537_2 COGs COG1252 NADH dehydrogenase FAD-containing subunit K17218 - 1.8.5.4 4.086e-304 934.0
CMS1_k127_1922537_20 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000004475 150.0
CMS1_k127_1922537_23 - - - - 0.0000000000000000009532 86.0
CMS1_k127_1922537_24 Lysin motif - - - 0.0004594 51.0
CMS1_k127_1922537_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.331e-301 930.0
CMS1_k127_1922537_4 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 1.309e-275 850.0
CMS1_k127_1922537_5 Mechanosensitive ion channel - - - 1.496e-220 692.0
CMS1_k127_1922537_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 7.709e-195 610.0
CMS1_k127_1922537_7 ABC transporter K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 512.0
CMS1_k127_1922537_8 COG0242 N-formylmethionyl-tRNA deformylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 409.0
CMS1_k127_1922537_9 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 379.0
CMS1_k127_193727_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 1.015e-252 782.0
CMS1_k127_193727_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.47e-241 751.0
CMS1_k127_193727_10 - - - - 0.000000000000000000000000000000000000000000000006666 173.0
CMS1_k127_193727_11 Acid phosphatase homologues - - - 0.0000000000000000000000002578 115.0
CMS1_k127_193727_2 peptidylprolyl isomerase K03770 - 5.2.1.8 3.164e-219 689.0
CMS1_k127_193727_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 5.82e-212 661.0
CMS1_k127_193727_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 2.418e-198 622.0
CMS1_k127_193727_5 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 444.0
CMS1_k127_193727_6 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 351.0
CMS1_k127_193727_7 (Lipo)protein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 337.0
CMS1_k127_193727_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 306.0
CMS1_k127_193727_9 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003787 262.0
CMS1_k127_1940945_2 Oxygen tolerance - - - 0.0000000000000000000141 94.0
CMS1_k127_1940945_3 LPP20 lipoprotein - - - 0.00000000000000000004788 102.0
CMS1_k127_1940945_4 Domain of unknown function (DUF4105) - - - 0.0000000000000729 75.0
CMS1_k127_1947656_0 Protein of unknown function DUF115 - - - 1.226e-226 720.0
CMS1_k127_1947656_1 Protein of unknown function DUF115 - - - 3.177e-208 666.0
CMS1_k127_1947656_2 acid synthase K01654,K15898 - 2.5.1.56,2.5.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 550.0
CMS1_k127_1947656_3 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 479.0
CMS1_k127_1947656_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 388.0
CMS1_k127_1947656_5 Pseudaminic acid biosynthesis N-acetyl transferase K15896 - 2.3.1.202 0.0000000000000000000000000000006127 127.0
CMS1_k127_1947656_6 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.0000000000000004304 78.0
CMS1_k127_1947656_7 GlcNAc-PI de-N-acetylase - - - 0.00000003239 54.0
CMS1_k127_1960871_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 8.22e-270 836.0
CMS1_k127_1960871_1 Belongs to the ALAD family K01698 - 4.2.1.24 1.117e-196 615.0
CMS1_k127_1960871_10 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.0000000000000000000000000000000000000000000001105 170.0
CMS1_k127_1960871_11 - - - - 0.00000000000000000000000000000000002946 138.0
CMS1_k127_1960871_12 phosphoribosyltransferase K00769 - 2.4.2.22 0.000000000000000000000004478 102.0
CMS1_k127_1960871_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 588.0
CMS1_k127_1960871_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 547.0
CMS1_k127_1960871_4 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 499.0
CMS1_k127_1960871_5 Belongs to the GSP D family K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 498.0
CMS1_k127_1960871_6 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 331.0
CMS1_k127_1960871_7 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 306.0
CMS1_k127_1960871_9 membrane K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000008957 221.0
CMS1_k127_1971765_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0005488,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 4.2.3.5 8.889e-199 622.0
CMS1_k127_1971765_1 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 542.0
CMS1_k127_1971765_10 Protein of unknown function (DUF493) - - - 0.0000000000000000002532 91.0
CMS1_k127_1971765_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007504 429.0
CMS1_k127_1971765_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 359.0
CMS1_k127_1971765_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 294.0
CMS1_k127_1971765_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 293.0
CMS1_k127_1971765_6 PAS fold K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004194 247.0
CMS1_k127_1971765_7 cyclic nucleotide binding K04739,K10914 - - 0.0000000000000000000000000000000000000000000000000000000000971 207.0
CMS1_k127_1971765_9 - - - - 0.0000000000000000001846 91.0
CMS1_k127_2021228_0 Domain of unknown function(DUF2779) - - - 1.372e-243 760.0
CMS1_k127_2142537_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 480.0
CMS1_k127_2142537_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 344.0
CMS1_k127_2142537_2 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000002712 233.0
CMS1_k127_2142537_3 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000804 168.0
CMS1_k127_2142537_4 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000001771 167.0
CMS1_k127_2142537_5 Cytochrome c K08738 - - 0.0000000000000000000009207 98.0
CMS1_k127_2145917_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 2.195e-297 917.0
CMS1_k127_2145917_1 COG0841 Cation multidrug efflux pump - - - 1.858e-284 882.0
CMS1_k127_2145917_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.538e-278 862.0
CMS1_k127_2145917_3 outer membrane efflux protein - - - 2.489e-203 641.0
CMS1_k127_2145917_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 393.0
CMS1_k127_2145917_5 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 310.0
CMS1_k127_2385859_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 418.0
CMS1_k127_2385859_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000002207 227.0
CMS1_k127_2385859_10 denitrification pathway - - - 0.000003599 53.0
CMS1_k127_2385859_2 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000005139 213.0
CMS1_k127_2385859_3 - - - - 0.000000000000000000000000000000000000003706 156.0
CMS1_k127_2385859_4 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000247 117.0
CMS1_k127_2385859_5 cytochrome c biogenesis protein - - - 0.0000000000000001064 80.0
CMS1_k127_2385859_6 Cytochrome c - - - 0.00000000000006909 81.0
CMS1_k127_2385859_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000003614 77.0
CMS1_k127_2385859_8 cytochrome - - - 0.0000002392 61.0
CMS1_k127_2385859_9 Domain of unknown function (DUF4136) - - - 0.000002384 55.0
CMS1_k127_2500218_0 chaperone-mediated protein folding - - - 4.193e-276 865.0
CMS1_k127_2500218_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 307.0
CMS1_k127_2516989_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 2.416e-248 769.0
CMS1_k127_2516989_1 Aldo/keto reductase family - - - 1.115e-206 649.0
CMS1_k127_2516989_10 - - - - 0.0000000000000000000000000000000000000193 151.0
CMS1_k127_2516989_11 7TMR-DISM extracellular 2 - - - 0.0000000000000001782 86.0
CMS1_k127_2516989_12 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000001704 76.0
CMS1_k127_2516989_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 595.0
CMS1_k127_2516989_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 400.0
CMS1_k127_2516989_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005113 249.0
CMS1_k127_2516989_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000001544 230.0
CMS1_k127_2516989_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001329 222.0
CMS1_k127_2516989_7 ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000000000001336 219.0
CMS1_k127_2516989_8 Nitrogen fixation protein NifU - - - 0.00000000000000000000000000000000000000000000001752 171.0
CMS1_k127_2516989_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000009597 147.0
CMS1_k127_2520070_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.365e-246 764.0
CMS1_k127_2520070_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 567.0
CMS1_k127_2520070_2 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 459.0
CMS1_k127_2520070_3 dna polymerase iii K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 409.0
CMS1_k127_2520070_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 397.0
CMS1_k127_2520070_5 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000003812 147.0
CMS1_k127_2520070_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000147 121.0
CMS1_k127_2541168_0 Metallo-beta-lactamase superfamily - - - 9.42e-247 769.0
CMS1_k127_2541168_1 Fad-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 2.072e-205 644.0
CMS1_k127_2541168_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 532.0
CMS1_k127_2541168_3 Sel1-like repeats. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 299.0
CMS1_k127_2541168_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02303,K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000001416 133.0
CMS1_k127_2541168_5 phosphorelay signal transduction system - - - 0.000000000000000000000000000000001283 138.0
CMS1_k127_2544597_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K03581 - 3.1.11.5 0.0 1000.0
CMS1_k127_2544597_1 Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 535.0
CMS1_k127_2544597_2 Epimerase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 419.0
CMS1_k127_2544597_3 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000001787 225.0
CMS1_k127_2544597_4 PFAM AMMECR1 domain protein K09141 - - 0.00000000000000000000000000000000000000000000000756 177.0
CMS1_k127_2545080_0 Mitochondrial degradasome RNA helicase subunit C terminal K17675 - 3.6.4.13 0.0 1355.0
CMS1_k127_2545080_1 Protein of unknown function (DUF1538) - - - 0.0 1072.0
CMS1_k127_2545080_10 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.958e-228 714.0
CMS1_k127_2545080_11 chemotaxis protein K03406 - - 2.579e-205 651.0
CMS1_k127_2545080_12 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 6.492e-203 635.0
CMS1_k127_2545080_13 Arginosuccinate synthase K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 583.0
CMS1_k127_2545080_14 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 572.0
CMS1_k127_2545080_15 chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 572.0
CMS1_k127_2545080_16 Major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 558.0
CMS1_k127_2545080_17 phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 553.0
CMS1_k127_2545080_18 Flagellar basal body protein K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 481.0
CMS1_k127_2545080_19 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 471.0
CMS1_k127_2545080_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 8.109e-306 942.0
CMS1_k127_2545080_20 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 469.0
CMS1_k127_2545080_21 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 473.0
CMS1_k127_2545080_22 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 387.0
CMS1_k127_2545080_23 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 376.0
CMS1_k127_2545080_24 fumarate reductase, iron-sulfur protein K00245 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 364.0
CMS1_k127_2545080_25 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 362.0
CMS1_k127_2545080_26 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 346.0
CMS1_k127_2545080_27 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 306.0
CMS1_k127_2545080_28 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 287.0
CMS1_k127_2545080_29 PFAM Cobinamide kinase cobinamide phosphate guanyltransferase K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000002264 261.0
CMS1_k127_2545080_3 Flagellar hook protein flgE K02390 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 3.41e-292 918.0
CMS1_k127_2545080_30 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006735 234.0
CMS1_k127_2545080_31 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000000000005149 225.0
CMS1_k127_2545080_32 - - - - 0.000000000000000000000000000000000000000000000000000000009142 200.0
CMS1_k127_2545080_33 pseudouridine synthase activity - - - 0.000000000000000000000000000000000000000000000000000001598 200.0
CMS1_k127_2545080_34 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000000002364 185.0
CMS1_k127_2545080_35 metal cluster binding - - - 0.0000000000000000000000000000000000000000000001022 171.0
CMS1_k127_2545080_36 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000001097 171.0
CMS1_k127_2545080_37 - - - - 0.00000000000000000000000000000000000000001571 157.0
CMS1_k127_2545080_38 PAS sensor protein - - - 0.00000000000000000000000000000000000000001708 158.0
CMS1_k127_2545080_39 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000006947 168.0
CMS1_k127_2545080_4 Radical SAM - - - 3.451e-264 819.0
CMS1_k127_2545080_40 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000006755 133.0
CMS1_k127_2545080_41 Domain of unknown function (DUF309) - - - 0.0000000000000000000000000000000002241 134.0
CMS1_k127_2545080_5 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 2.771e-256 798.0
CMS1_k127_2545080_6 GGDEF domain - - - 7.882e-252 792.0
CMS1_k127_2545080_7 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 3.371e-239 741.0
CMS1_k127_2545080_8 LapD/MoxY periplasmic domain - - - 8.064e-238 751.0
CMS1_k127_2545080_9 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 5.224e-233 725.0
CMS1_k127_2561147_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1507.0
CMS1_k127_2561147_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.878e-275 847.0
CMS1_k127_2561147_10 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000000000005904 187.0
CMS1_k127_2561147_11 - - - - 0.000000000000000000000000000000000002832 140.0
CMS1_k127_2561147_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.443e-247 766.0
CMS1_k127_2561147_3 PAS domain K09155 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 596.0
CMS1_k127_2561147_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 592.0
CMS1_k127_2561147_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 591.0
CMS1_k127_2561147_6 Belongs to the pseudouridine synthase RluA family K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 468.0
CMS1_k127_2561147_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 310.0
CMS1_k127_2561147_8 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000297 265.0
CMS1_k127_2561147_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000005915 261.0
CMS1_k127_2563023_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000001916 233.0
CMS1_k127_2563023_1 Diguanylate cyclase - - - 0.000000000000000000000000003123 121.0
CMS1_k127_2636422_0 Aminotransferase K00812 - 2.6.1.1 4.227e-219 685.0
CMS1_k127_2636422_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 455.0
CMS1_k127_2636422_2 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 286.0
CMS1_k127_2636422_3 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006996 252.0
CMS1_k127_2636422_4 - - - - 0.00000000000000000000000000003981 117.0
CMS1_k127_2636422_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000347 91.0
CMS1_k127_2638601_0 penicillin-binding protein K05515 - 3.4.16.4 2.326e-302 935.0
CMS1_k127_2638601_1 K -dependent Na Ca exchanger K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 503.0
CMS1_k127_2638601_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 402.0
CMS1_k127_2638601_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000004056 194.0
CMS1_k127_2638601_5 hmm pf01863 K07043 - - 0.00000000000000006098 83.0
CMS1_k127_2665779_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1060.0
CMS1_k127_2665779_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.766e-251 777.0
CMS1_k127_2665779_2 ubiquinol cytochrome c oxidoreductase, cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 543.0
CMS1_k127_2665779_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 453.0
CMS1_k127_2665779_4 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 402.0
CMS1_k127_2665779_5 riboflavin synthase alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 354.0
CMS1_k127_2665779_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 357.0
CMS1_k127_2665779_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
CMS1_k127_2665779_8 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002087 233.0
CMS1_k127_2698608_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0 1125.0
CMS1_k127_2698608_1 ATP synthase K02412 - 3.6.3.14 9.66e-240 746.0
CMS1_k127_2698608_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 431.0
CMS1_k127_2698608_3 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 361.0
CMS1_k127_2698608_4 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 310.0
CMS1_k127_2700046_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 281.0
CMS1_k127_2700046_1 Abc transporter K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008473 265.0
CMS1_k127_2700046_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001968 242.0
CMS1_k127_2700046_3 5'-nucleotidase - - - 0.0000000000000004074 86.0
CMS1_k127_2700046_4 Cytochrome c554 and c-prime - - - 0.00000000000002854 81.0
CMS1_k127_2714874_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1221.0
CMS1_k127_2714874_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1217.0
CMS1_k127_2714874_10 PAS fold K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001999 269.0
CMS1_k127_2714874_11 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001668 217.0
CMS1_k127_2714874_12 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000000000003851 167.0
CMS1_k127_2714874_13 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000513 119.0
CMS1_k127_2714874_14 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00366,K00392 - 1.7.7.1,1.8.7.1 0.000000005707 57.0
CMS1_k127_2714874_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0 1028.0
CMS1_k127_2714874_3 2-nitropropane dioxygenase K00459 - 1.13.12.16 1.449e-221 688.0
CMS1_k127_2714874_4 phosphohydrolase (DHH superfamily) K07097 - - 1.716e-210 658.0
CMS1_k127_2714874_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 4.247e-210 657.0
CMS1_k127_2714874_6 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 565.0
CMS1_k127_2714874_7 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 436.0
CMS1_k127_2714874_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 424.0
CMS1_k127_2714874_9 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 411.0
CMS1_k127_2773657_0 Pyridine nucleotide-disulphide oxidoreductase - - - 7.967e-229 715.0
CMS1_k127_2773657_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 5.841e-195 610.0
CMS1_k127_2773657_2 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 299.0
CMS1_k127_2773657_3 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004212 271.0
CMS1_k127_2773657_4 Protein of unknown function (DUF2892) - - - 0.00000000000000000001551 92.0
CMS1_k127_2781494_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1173.0
CMS1_k127_2781494_1 Iron-containing alcohol dehydrogenase K08325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 590.0
CMS1_k127_2781494_2 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007914 237.0
CMS1_k127_2781494_3 Resolvase, N terminal domain - - - 0.000000000000000000000000000003111 119.0
CMS1_k127_2781494_4 Phage integrase family - - - 0.00000000000000000000000003065 123.0
CMS1_k127_2802088_0 Belongs to the SEDS family K05837 - - 1.089e-205 643.0
CMS1_k127_2802088_1 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 566.0
CMS1_k127_2802088_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 510.0
CMS1_k127_2802088_3 Fibronectin type 3 domain-containing protein K06882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 494.0
CMS1_k127_2802088_4 - - - - 0.0000000000006248 72.0
CMS1_k127_2802088_5 - - - - 0.0000000004444 65.0
CMS1_k127_2805482_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 312.0
CMS1_k127_2805482_1 protein involved in exopolysaccharide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003801 265.0
CMS1_k127_2805482_2 Ankyrin repeat K06867,K21440 - - 0.000000000000000000000000000000000000000000000000000000000001408 220.0
CMS1_k127_280957_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2534.0
CMS1_k127_280957_1 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 3.554e-269 832.0
CMS1_k127_280957_10 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000001793 258.0
CMS1_k127_280957_11 DnaK suppressor protein K06204 - - 0.0000000000000000000000000000000000000000000000000000000000119 207.0
CMS1_k127_280957_12 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000124 177.0
CMS1_k127_280957_13 2-acylglycerophosphoethanolamine acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000007225 143.0
CMS1_k127_280957_2 Saccharopine dehydrogenase K00290 - 1.5.1.7 6.197e-239 741.0
CMS1_k127_280957_3 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 2.189e-230 715.0
CMS1_k127_280957_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 488.0
CMS1_k127_280957_5 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 394.0
CMS1_k127_280957_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 357.0
CMS1_k127_280957_7 RecO N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 339.0
CMS1_k127_280957_8 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 329.0
CMS1_k127_280957_9 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 290.0
CMS1_k127_2816141_0 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 554.0
CMS1_k127_2816141_1 UDP-N-acetylglucosamine 2-epimerase K18429 GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016787,GO:0016798,GO:0044238,GO:0071704,GO:1901576 3.2.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 512.0
CMS1_k127_2816141_2 Cytidylyltransferase K18431 - 2.7.7.82 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 372.0
CMS1_k127_2816141_3 NeuB family K18430 GO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016740,GO:0016765,GO:0044238,GO:0071704,GO:1901576 2.5.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 373.0
CMS1_k127_2816141_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 295.0
CMS1_k127_2816141_5 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.0000000000000000000000000000000000001233 153.0
CMS1_k127_2816141_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000001558 63.0
CMS1_k127_2820623_0 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006678 383.0
CMS1_k127_2831250_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1177.0
CMS1_k127_2831250_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 4.567e-209 653.0
CMS1_k127_2831250_2 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 567.0
CMS1_k127_2831250_3 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 526.0
CMS1_k127_2831250_4 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 480.0
CMS1_k127_2831250_5 hmm pf01863 K07043 - - 0.000000000000000000000000000000000000000000000000000000000001019 212.0
CMS1_k127_2831250_6 - - - - 0.00000000000000000001839 92.0
CMS1_k127_2831250_7 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000003567 81.0
CMS1_k127_2849914_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 4.394e-201 641.0
CMS1_k127_2850064_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1109.0
CMS1_k127_2850064_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 568.0
CMS1_k127_2850064_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 541.0
CMS1_k127_2850064_3 transformation system protein K02242 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000557 276.0
CMS1_k127_2850064_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008396 273.0
CMS1_k127_2850064_5 Lytic transglycosylase catalytic K08306,K08309 - - 0.000000000000000000000000000000000000000000000000000000000004548 211.0
CMS1_k127_2871714_0 lytic murein transglycosylase K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 602.0
CMS1_k127_2871714_1 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 340.0
CMS1_k127_2871714_2 Imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 337.0
CMS1_k127_2871714_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 314.0
CMS1_k127_2871714_4 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000001011 265.0
CMS1_k127_2871714_5 acetyltransferase K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000006063 228.0
CMS1_k127_2871714_6 Lipopolysaccharide transport periplasmic protein lpta K09774 - - 0.0000000000000000000000000000000000000000000000000108 184.0
CMS1_k127_2871714_8 hydrolase, TatD K03424 - - 0.00000000007315 63.0
CMS1_k127_2907941_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1188.0
CMS1_k127_2907941_1 Two-component sensor histidine kinase response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 466.0
CMS1_k127_2907941_2 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 431.0
CMS1_k127_2907941_3 membrane-associated protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 332.0
CMS1_k127_2907941_4 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000000000000000000000000005672 152.0
CMS1_k127_2907941_5 7TM diverse intracellular signalling - - - 0.00001048 55.0
CMS1_k127_2923118_0 Major Facilitator Superfamily K06902 - - 4.609e-198 629.0
CMS1_k127_2923118_1 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 533.0
CMS1_k127_2923118_2 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 486.0
CMS1_k127_2923118_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 321.0
CMS1_k127_2923118_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 286.0
CMS1_k127_2923118_5 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004269 277.0
CMS1_k127_2923118_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003783 263.0
CMS1_k127_2923118_7 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000227 192.0
CMS1_k127_2923118_8 PFAM ATP-binding region ATPase domain protein - - - 0.000000000009961 74.0
CMS1_k127_2926496_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1624.0
CMS1_k127_2926496_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.147e-254 789.0
CMS1_k127_2926496_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 334.0
CMS1_k127_2926496_3 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 325.0
CMS1_k127_2926496_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003377 238.0
CMS1_k127_2926496_5 CHASE2 K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000001349 203.0
CMS1_k127_2958727_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 2.497e-233 731.0
CMS1_k127_2958727_1 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 522.0
CMS1_k127_2958727_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 335.0
CMS1_k127_2958727_3 general secretion pathway protein K02247,K02456,K02679,K12285 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004985 252.0
CMS1_k127_2958727_4 - - - - 0.0000000000000000000000000000000000000000000002634 170.0
CMS1_k127_2958727_5 Prokaryotic N-terminal methylation motif K12285 - - 0.000000000000000000000000000002733 126.0
CMS1_k127_2958727_7 cell adhesion K02650 - - 0.000000001203 66.0
CMS1_k127_2961543_0 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 503.0
CMS1_k127_2961543_1 abc transporter atp-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 385.0
CMS1_k127_2961543_2 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000004088 110.0
CMS1_k127_2962539_0 chemotaxis protein - - - 3.86e-234 735.0
CMS1_k127_2962539_1 Protein conserved in bacteria K09943 - - 0.00000000000000000000000000000001717 127.0
CMS1_k127_2963750_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 2169.0
CMS1_k127_2963750_1 phosphate transporter K03306 - - 1.897e-272 846.0
CMS1_k127_2963750_2 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 494.0
CMS1_k127_2963750_3 4Fe-4S ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 310.0
CMS1_k127_2963750_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005558 274.0
CMS1_k127_2963750_5 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000000000000000000000000000000004587 217.0
CMS1_k127_2963750_6 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000004093 206.0
CMS1_k127_2963750_7 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000000002397 171.0
CMS1_k127_2969780_0 UDP-N-acetylglucosamine 4,6-dehydratase K15894 - 4.2.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 584.0
CMS1_k127_2969780_1 morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 GO:0001539,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 569.0
CMS1_k127_2969780_2 Belongs to the DegT DnrJ EryC1 family K15895 - 2.6.1.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 560.0
CMS1_k127_2969780_3 pseudaminic acid biosynthesis-associated protein PseG K15897 - 3.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009091 361.0
CMS1_k127_2969780_4 CMP-N-acetylneuraminic acid synthetase K00983,K15899 - 2.7.7.43,2.7.7.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 354.0
CMS1_k127_2969780_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 299.0
CMS1_k127_2969780_6 flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000000000000000000004038 201.0
CMS1_k127_2969780_7 ATP-grasp domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000007823 163.0
CMS1_k127_2969780_8 GDP-mannose 4,6 dehydratase K01784 GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0003974,GO:0003978,GO:0005975,GO:0005996,GO:0006012,GO:0007275,GO:0008150,GO:0008152,GO:0009791,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0030097,GO:0032501,GO:0032502,GO:0035166,GO:0035167,GO:0044238,GO:0044281,GO:0048513,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0071704 5.1.3.2 0.0004295 47.0
CMS1_k127_2970395_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 4.278e-232 721.0
CMS1_k127_2970395_1 pyruvate ferredoxin oxidoreductase K00170 - 1.2.7.1 1.652e-197 616.0
CMS1_k127_2970395_2 Abc transporter K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 561.0
CMS1_k127_2970395_3 pyruvate ferredoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 354.0
CMS1_k127_2970395_4 Hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 313.0
CMS1_k127_2970395_5 pyruvate ferredoxin oxidoreductase K00171 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000006792 252.0
CMS1_k127_2970395_6 methyltransferase K00575 - 2.1.1.80 0.0000000000000000000499 89.0
CMS1_k127_2999713_0 chemotaxis protein K03407 - 2.7.13.3 0.0 1289.0
CMS1_k127_2999713_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 540.0
CMS1_k127_2999713_2 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 472.0
CMS1_k127_2999713_3 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 286.0
CMS1_k127_2999713_4 PFAM response regulator receiver K03407,K03413 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000002118 234.0
CMS1_k127_2999713_5 GGDEF domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000103 199.0
CMS1_k127_2999713_6 chemotaxis K03408 - - 0.000000000000000000000000000000000000000000000000000006352 192.0
CMS1_k127_2999713_7 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000003207 190.0
CMS1_k127_3011465_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971 - 2.7.7.13 1.844e-241 751.0
CMS1_k127_3011465_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 3.575e-232 719.0
CMS1_k127_3011465_11 transferase activity, transferring amino-acyl groups - - - 0.00000000000000000000003736 102.0
CMS1_k127_3011465_2 Polysaccharide biosynthesis protein - - - 8.879e-229 711.0
CMS1_k127_3011465_3 Belongs to the DegT DnrJ EryC1 family - - - 4.857e-206 644.0
CMS1_k127_3011465_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 1.521e-201 629.0
CMS1_k127_3011465_5 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 1.695e-194 610.0
CMS1_k127_3011465_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 510.0
CMS1_k127_3011465_7 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005314 426.0
CMS1_k127_3011465_8 COG0463 Glycosyltransferases involved in cell wall biogenesis K13002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 285.0
CMS1_k127_3011465_9 Belongs to the Nudix hydrolase family K03207 GO:0000287,GO:0003674,GO:0003824,GO:0004553,GO:0005488,GO:0015926,GO:0016787,GO:0016798,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047917 - 0.000000000000000000000000000000000000000001436 160.0
CMS1_k127_3018129_0 AAA domain - - - 1.333e-224 721.0
CMS1_k127_3018129_1 membrane organization K20543 - - 0.000000000000000000000000000000000000000000000000000000641 208.0
CMS1_k127_3018129_2 Thiamine-binding protein - - - 0.000000000000000000000000000000000000000000000000002715 183.0
CMS1_k127_3018129_3 response to abiotic stimulus K21439 - - 0.0000000000000000000000000000000000000000000000004992 179.0
CMS1_k127_3018129_4 Domain of unknown function DUF302 K12308 - 3.2.1.23 0.000000003258 63.0
CMS1_k127_302770_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 2.394e-218 696.0
CMS1_k127_302770_1 GGDEF domain - GO:0003674,GO:0003824,GO:0008081,GO:0016787,GO:0016788,GO:0042578,GO:0071111 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 413.0
CMS1_k127_302770_2 Chemotaxis protein CheW K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000008747 225.0
CMS1_k127_302770_3 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000005315 212.0
CMS1_k127_302770_4 - - - - 0.000000000000001861 77.0
CMS1_k127_3033473_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 4.554e-232 723.0
CMS1_k127_3033473_1 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 505.0
CMS1_k127_3033473_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 307.0
CMS1_k127_3036452_0 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 352.0
CMS1_k127_3036452_1 protein conserved in bacteria K09943 - - 0.00000000000000000000000000000000000000000000000000000000000006526 216.0
CMS1_k127_3036452_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000006604 200.0
CMS1_k127_3036452_3 Phosphate-starvation-inducible E - - - 0.000002295 54.0
CMS1_k127_303665_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 3.74e-225 707.0
CMS1_k127_303665_1 Diguanylate cyclase K13069 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007155,GO:0008150,GO:0008270,GO:0009987,GO:0010639,GO:0016740,GO:0016772,GO:0016779,GO:0022610,GO:0031344,GO:0031345,GO:0031589,GO:0032879,GO:0033043,GO:0042710,GO:0042802,GO:0043167,GO:0043169,GO:0043708,GO:0043709,GO:0043900,GO:0043902,GO:0044010,GO:0044087,GO:0044464,GO:0044764,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051270,GO:0051271,GO:0051704,GO:0052621,GO:0060187,GO:0060491,GO:0065007,GO:0090605,GO:0090609,GO:1900190,GO:1900192,GO:1900231,GO:1900233,GO:1902115,GO:1902116,GO:1902208,GO:1902209 2.7.7.65 0.000000000000000000000000000000000000000000002437 180.0
CMS1_k127_3038350_0 cytochrome c - - - 0.0 1184.0
CMS1_k127_3038350_1 ATP-dependent DNA helicase K03655 - 3.6.4.12 1.756e-289 899.0
CMS1_k127_3038350_10 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000108 263.0
CMS1_k127_3038350_11 general secretion pathway protein - - - 0.00000000000000000000000000000000000000000000000000006333 194.0
CMS1_k127_3038350_12 - - - - 0.00000000000000000000000000000000000000002797 156.0
CMS1_k127_3038350_13 His Kinase A (phosphoacceptor) domain - - - 0.00000000000001597 79.0
CMS1_k127_3038350_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 9.82e-214 665.0
CMS1_k127_3038350_3 Peptidase, M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 603.0
CMS1_k127_3038350_4 membrane K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 511.0
CMS1_k127_3038350_5 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 460.0
CMS1_k127_3038350_6 Prepilin-type N-terminal cleavage methylation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 379.0
CMS1_k127_3038350_7 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 359.0
CMS1_k127_3038350_8 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 297.0
CMS1_k127_3038350_9 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 293.0
CMS1_k127_3078138_0 Belongs to the DegT DnrJ EryC1 family K15910 - 2.6.1.34 1.906e-202 634.0
CMS1_k127_3078138_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 426.0
CMS1_k127_3078138_10 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000002443 50.0
CMS1_k127_3078138_11 Glycosyltransferase like family 2 - - - 0.000006359 57.0
CMS1_k127_3078138_2 Pfam Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 336.0
CMS1_k127_3078138_3 Transferase K15915 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 319.0
CMS1_k127_3078138_4 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family K15913 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.3.1.203 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004243 274.0
CMS1_k127_3078138_5 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000001842 199.0
CMS1_k127_3078138_6 - - - - 0.00000000000000000000000000000000000000007884 158.0
CMS1_k127_3078138_7 Bacterial transferase hexapeptide (six repeats) K00638,K00661,K18234 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008374,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044444,GO:0044464 2.3.1.28,2.3.1.79 0.00000000000000000000000000009357 121.0
CMS1_k127_3078138_8 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 0.000000000000000000000000007136 111.0
CMS1_k127_3078138_9 Polysaccharide biosynthesis protein - - - 0.00000000000003216 85.0
CMS1_k127_3079788_0 sulfur dehydrogenase subunit K17225 - - 3.222e-266 822.0
CMS1_k127_3079788_1 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 561.0
CMS1_k127_3079788_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 507.0
CMS1_k127_3079788_3 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 401.0
CMS1_k127_3079788_4 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007461 245.0
CMS1_k127_3079788_5 PFAM MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000199 205.0
CMS1_k127_3079788_6 thiamine-phosphate diphosphorylase activity K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000003569 202.0
CMS1_k127_3079788_7 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000001247 129.0
CMS1_k127_3079788_8 Methyltransferase domain K02169 - 2.1.1.197 0.00000000001265 64.0
CMS1_k127_3093722_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1558.0
CMS1_k127_3093722_1 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0 1103.0
CMS1_k127_3093722_10 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008988 248.0
CMS1_k127_3093722_11 Dihaem cytochrome c - - - 0.000000000000000000000000000000000000000000000045 175.0
CMS1_k127_3093722_12 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000000000004012 165.0
CMS1_k127_3093722_13 mismatched DNA binding K03555 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008301,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0030983,GO:0031323,GO:0032136,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000001396 153.0
CMS1_k127_3093722_14 that it carries out the mismatch recognition step. This protein has a weak ATPase activity - - - 0.00000000000000000000000000000000004026 145.0
CMS1_k127_3093722_15 GGDEF domain - - - 0.0000000000000000000000000000000001733 138.0
CMS1_k127_3093722_16 - - - - 0.00000000008684 67.0
CMS1_k127_3093722_2 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 3.535e-220 691.0
CMS1_k127_3093722_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 459.0
CMS1_k127_3093722_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 435.0
CMS1_k127_3093722_5 Cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007944 433.0
CMS1_k127_3093722_6 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 429.0
CMS1_k127_3093722_7 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 373.0
CMS1_k127_3093722_8 Chemotaxis protein CheY K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 306.0
CMS1_k127_3093722_9 Histidine kinase K13040 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001581 268.0
CMS1_k127_3136583_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 2.68e-223 698.0
CMS1_k127_3136583_1 Sodium/hydrogen exchanger family - - - 1.255e-215 673.0
CMS1_k127_3136583_10 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000000000002068 152.0
CMS1_k127_3136583_11 Chemotaxis phosphatase CheX - - - 0.00000000000000000002837 105.0
CMS1_k127_3136583_12 Domain of unknown function (DUF4389) - - - 0.00000000000000007085 84.0
CMS1_k127_3136583_13 - - - - 0.00000000000004946 73.0
CMS1_k127_3136583_2 Permease, YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 466.0
CMS1_k127_3136583_3 Peptidase A24 K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 409.0
CMS1_k127_3136583_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 381.0
CMS1_k127_3136583_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 352.0
CMS1_k127_3136583_6 alpha beta K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 301.0
CMS1_k127_3136583_7 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 296.0
CMS1_k127_3136583_8 COGs COG2346 Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004117 243.0
CMS1_k127_314829_0 Domain of unknown function (DUF4105) - - - 3.758e-258 808.0
CMS1_k127_314829_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.108e-255 789.0
CMS1_k127_314829_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 2.065e-201 631.0
CMS1_k127_314829_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 524.0
CMS1_k127_314829_4 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001425 232.0
CMS1_k127_314829_5 AMIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000006739 222.0
CMS1_k127_314829_6 Flagellar biosynthetic protein FliQ K02420 - - 0.0000000000000000000000000000000000000001396 151.0
CMS1_k127_314829_8 cell wall formation K00075 - 1.3.1.98 0.00000000000000001131 83.0
CMS1_k127_3180504_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.708e-248 771.0
CMS1_k127_3180504_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 2.368e-201 631.0
CMS1_k127_3180504_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 406.0
CMS1_k127_3180504_3 - - - - 0.000000000000000000000000000000000000000000000000000001802 194.0
CMS1_k127_3180504_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000004274 190.0
CMS1_k127_3180504_5 Omptin family - - - 0.00000000000000000000000002744 119.0
CMS1_k127_3180504_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.000000001254 67.0
CMS1_k127_3180504_8 VIT family - - - 0.00003726 47.0
CMS1_k127_3210168_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 7.519e-296 930.0
CMS1_k127_3210168_1 - - - - 0.0000000000000000129 83.0
CMS1_k127_3221926_0 DNA helicase K03657 - 3.6.4.12 0.0 1225.0
CMS1_k127_3221926_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1200.0
CMS1_k127_3221926_10 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000005127 116.0
CMS1_k127_3221926_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 1.906e-224 707.0
CMS1_k127_3221926_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 544.0
CMS1_k127_3221926_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 516.0
CMS1_k127_3221926_5 phosphoribosyltransferase K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 310.0
CMS1_k127_3221926_6 Branched-chain amino acid aminotransferase K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000008096 258.0
CMS1_k127_3221926_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001298 224.0
CMS1_k127_3221926_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000000006165 183.0
CMS1_k127_325732_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.0 1040.0
CMS1_k127_325732_1 glutamine synthetase K01915 - 6.3.1.2 9.856e-300 920.0
CMS1_k127_325732_10 PhoU family K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 326.0
CMS1_k127_325732_11 Histidine kinase K13040 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 304.0
CMS1_k127_325732_12 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000006633 173.0
CMS1_k127_325732_13 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000007121 154.0
CMS1_k127_325732_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 1.393e-194 609.0
CMS1_k127_325732_3 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 592.0
CMS1_k127_325732_4 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 549.0
CMS1_k127_325732_5 phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 501.0
CMS1_k127_325732_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 491.0
CMS1_k127_325732_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 494.0
CMS1_k127_325732_8 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 446.0
CMS1_k127_325732_9 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 413.0
CMS1_k127_3267283_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 3.921e-222 692.0
CMS1_k127_3267283_1 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 557.0
CMS1_k127_3267283_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 502.0
CMS1_k127_3267283_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 425.0
CMS1_k127_3267283_4 DNA replication regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 318.0
CMS1_k127_3267283_5 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001324 278.0
CMS1_k127_3267283_6 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005256 254.0
CMS1_k127_3316492_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1442.0
CMS1_k127_3316492_1 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1260.0
CMS1_k127_3316492_10 Hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 504.0
CMS1_k127_3316492_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 490.0
CMS1_k127_3316492_12 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 480.0
CMS1_k127_3316492_13 PFAM Archaea bacterial proteins of K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 476.0
CMS1_k127_3316492_14 Long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 465.0
CMS1_k127_3316492_15 DnaJ domain protein K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 449.0
CMS1_k127_3316492_16 ATP-binding protein K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 419.0
CMS1_k127_3316492_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 392.0
CMS1_k127_3316492_18 ABC transporter permease K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 372.0
CMS1_k127_3316492_19 Ion transport protein K08714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 374.0
CMS1_k127_3316492_2 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase K15022 - 1.17.1.10 0.0 1200.0
CMS1_k127_3316492_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 346.0
CMS1_k127_3316492_21 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 328.0
CMS1_k127_3316492_22 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 292.0
CMS1_k127_3316492_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000004387 217.0
CMS1_k127_3316492_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000001494 192.0
CMS1_k127_3316492_25 COG0760 Parvulin-like peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000009553 163.0
CMS1_k127_3316492_26 Cupin domain K11312 - - 0.000000000000000000000000000000000000000001369 158.0
CMS1_k127_3316492_27 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000001719 154.0
CMS1_k127_3316492_28 TOBE domain - - - 0.000000000000000000000000000000000002121 142.0
CMS1_k127_3316492_29 methyltransferase - - - 0.0000000000000000000000000000000003627 138.0
CMS1_k127_3316492_3 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.0 1116.0
CMS1_k127_3316492_30 putative NADH-ubiquinone oxidoreductase chain E K00334 - 1.6.5.3 0.000000000000000000000000000000006616 128.0
CMS1_k127_3316492_31 chaperone-mediated protein folding - - - 0.00000000000000000000000001645 111.0
CMS1_k127_3316492_32 NADH dehydrogenase (ubiquinone) activity K00330 - 1.6.5.3 0.000000000000003668 80.0
CMS1_k127_3316492_4 ATPase (AAA - - - 1.781e-316 975.0
CMS1_k127_3316492_5 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 1.171e-288 891.0
CMS1_k127_3316492_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.275e-278 861.0
CMS1_k127_3316492_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.981e-265 818.0
CMS1_k127_3316492_8 Nucleotidyltransferase DNA polymerase involved in DNA repair K02346 - 2.7.7.7 3.743e-231 719.0
CMS1_k127_3316492_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 596.0
CMS1_k127_333310_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1552.0
CMS1_k127_333310_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1150.0
CMS1_k127_333310_10 Rhodanese-like domain - - - 0.00000000000000000000000000000000000000000000000000000000003225 207.0
CMS1_k127_333310_11 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000000000000000000003076 194.0
CMS1_k127_333310_13 - K09858 - - 0.00000000000000000000000000000000000000000000007343 171.0
CMS1_k127_333310_14 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000000000002914 146.0
CMS1_k127_333310_15 S4 domain K14761 - - 0.00000000000000000000000000009519 115.0
CMS1_k127_333310_16 Protein of unknown function (DUF1653) - - - 0.00000000000000000000001933 101.0
CMS1_k127_333310_17 chemotaxis protein - - - 0.00000000000000000003606 92.0
CMS1_k127_333310_2 abc transporter atp-binding protein - - - 1.97e-319 981.0
CMS1_k127_333310_3 Malate quinone- oxidoreductase K00116 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.5.4 4.814e-286 882.0
CMS1_k127_333310_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 368.0
CMS1_k127_333310_5 protein of Gammaproteobacteria UniRef RepID - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000968 287.0
CMS1_k127_333310_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004613 247.0
CMS1_k127_333310_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004505 237.0
CMS1_k127_333310_8 SprA-related family - - - 0.000000000000000000000000000000000000000000000000000000000000006301 222.0
CMS1_k127_333310_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000001437 211.0
CMS1_k127_335046_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 567.0
CMS1_k127_335046_1 TIGRFAM TRAP dicarboxylate transporter, DctP subunit K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 326.0
CMS1_k127_335046_2 Outer membrane efflux protein - - - 0.000003172 49.0
CMS1_k127_335308_0 DnaJ domain protein K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 409.0
CMS1_k127_335308_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006551 270.0
CMS1_k127_3360981_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.55e-247 768.0
CMS1_k127_3360981_1 3-deoxy-d-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 546.0
CMS1_k127_3360981_2 Belongs to the pseudouridine synthase RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 430.0
CMS1_k127_3360981_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 404.0
CMS1_k127_3360981_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 306.0
CMS1_k127_3360981_5 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003491 252.0
CMS1_k127_3360981_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000000984 159.0
CMS1_k127_3360981_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000008739 133.0
CMS1_k127_3360981_8 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000393 115.0
CMS1_k127_3360981_9 Belongs to the UPF0109 family K06960 - - 0.000001469 53.0
CMS1_k127_3373695_0 Belongs to the FtsK SpoIIIE SftA family K03466 - - 5.42e-288 889.0
CMS1_k127_3373695_1 Belongs to the aconitase IPM isomerase family K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:0097159,GO:1901363,GO:1901575 4.2.1.3,4.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 457.0
CMS1_k127_3385661_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.512e-272 841.0
CMS1_k127_3385661_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 1.716e-204 642.0
CMS1_k127_3385661_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 573.0
CMS1_k127_3385661_3 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 449.0
CMS1_k127_3385661_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 360.0
CMS1_k127_3385661_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 321.0
CMS1_k127_3385661_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000001168 139.0
CMS1_k127_3385661_7 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000001489 125.0
CMS1_k127_3397768_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1315.0
CMS1_k127_3397768_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0 1066.0
CMS1_k127_3397768_10 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 4.912e-200 625.0
CMS1_k127_3397768_11 4Fe-4S binding domain - - - 8.939e-199 623.0
CMS1_k127_3397768_12 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 602.0
CMS1_k127_3397768_13 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
CMS1_k127_3397768_14 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 383.0
CMS1_k127_3397768_15 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 332.0
CMS1_k127_3397768_16 component of anaerobic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 308.0
CMS1_k127_3397768_17 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 296.0
CMS1_k127_3397768_18 PFAM O-Antigen K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009786 269.0
CMS1_k127_3397768_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009581 254.0
CMS1_k127_3397768_2 Oligosaccharyl transferase, STT3 subunit K07151,K17251 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0034645,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046872,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.99.18,2.4.99.19 1.597e-320 994.0
CMS1_k127_3397768_20 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000008246 172.0
CMS1_k127_3397768_21 transcriptional regulator - - - 0.0000004864 61.0
CMS1_k127_3397768_3 diguanylate cyclase - - - 1.005e-317 980.0
CMS1_k127_3397768_4 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.358e-296 910.0
CMS1_k127_3397768_5 COG1070 Sugar (pentulose and hexulose) K11216 - 2.7.1.189 2.012e-278 861.0
CMS1_k127_3397768_6 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.311e-236 734.0
CMS1_k127_3397768_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 2.798e-223 694.0
CMS1_k127_3397768_8 sulfate adenylyltransferase K00958 - 2.7.7.4 4.923e-221 690.0
CMS1_k127_3397768_9 Belongs to the GPI family K01810 - 5.3.1.9 4.871e-220 687.0
CMS1_k127_3420824_0 Aminotransferase K14261 - - 1.833e-251 777.0
CMS1_k127_3420824_1 homoserine dehydrogenase K00003 - 1.1.1.3 9.992e-235 730.0
CMS1_k127_3420824_10 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 323.0
CMS1_k127_3420824_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 322.0
CMS1_k127_3420824_12 PFAM FecR protein - - - 0.0000000000000000000000000000001273 134.0
CMS1_k127_3420824_13 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000001413 125.0
CMS1_k127_3420824_14 Protein conserved in bacteria - - - 0.0000000000009992 77.0
CMS1_k127_3420824_15 Tetratricopeptide repeat - - - 0.0003193 53.0
CMS1_k127_3420824_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 2.659e-205 656.0
CMS1_k127_3420824_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 586.0
CMS1_k127_3420824_4 molybdopterin biosynthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 586.0
CMS1_k127_3420824_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 448.0
CMS1_k127_3420824_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 443.0
CMS1_k127_3420824_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 376.0
CMS1_k127_3420824_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 365.0
CMS1_k127_3420824_9 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 346.0
CMS1_k127_3448435_0 Belongs to the DNA mismatch repair MutS family K03555 - - 0.0 1760.0
CMS1_k127_3448435_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1259.0
CMS1_k127_3448435_10 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000001666 220.0
CMS1_k127_3448435_11 Belongs to the ATPase B chain family K02109 - - 0.0000000000000000000000000000000000000000000000000000000000004336 213.0
CMS1_k127_3448435_13 - - - - 0.0000000000000000000000000000000000000000000000000000000003087 203.0
CMS1_k127_3448435_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000007876 187.0
CMS1_k127_3448435_15 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000001148 186.0
CMS1_k127_3448435_16 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000002216 179.0
CMS1_k127_3448435_17 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000007062 174.0
CMS1_k127_3448435_18 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000000001207 165.0
CMS1_k127_3448435_19 - - - - 0.00000000000000000000000000000000000000000000374 166.0
CMS1_k127_3448435_2 COG0474 Cation transport ATPase - - - 0.0 1018.0
CMS1_k127_3448435_20 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000007834 168.0
CMS1_k127_3448435_21 endonuclease activity K07451 - - 0.000000000000000000000000000000196 134.0
CMS1_k127_3448435_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 9.075e-213 663.0
CMS1_k127_3448435_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 3.676e-210 657.0
CMS1_k127_3448435_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 466.0
CMS1_k127_3448435_6 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 461.0
CMS1_k127_3448435_7 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 399.0
CMS1_k127_3448435_8 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 387.0
CMS1_k127_3448435_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 375.0
CMS1_k127_3448878_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 474.0
CMS1_k127_3448878_1 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006585 246.0
CMS1_k127_3448878_2 7TM diverse intracellular signalling - - - 0.0000000000000000000000000000000000000000000000000000000006873 220.0
CMS1_k127_3452167_0 PFAM HI0933 family protein K07007 - - 4.07e-200 629.0
CMS1_k127_3452167_1 Histidine kinase K13040 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 370.0
CMS1_k127_3452167_2 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 350.0
CMS1_k127_3452167_3 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 334.0
CMS1_k127_3452167_4 Pseudouridine synthase K06177,K06179,K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 311.0
CMS1_k127_3452167_5 Outer membrane protein beta-barrel family K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 312.0
CMS1_k127_3452167_7 His Kinase A (phosphoacceptor) domain - - - 0.00005735 51.0
CMS1_k127_3467267_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1445.0
CMS1_k127_3467267_1 Belongs to the aconitase IPM isomerase family K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:0097159,GO:1901363,GO:1901575 4.2.1.3,4.2.1.99 0.0 1089.0
CMS1_k127_3467267_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 9.301e-212 662.0
CMS1_k127_3467267_3 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 467.0
CMS1_k127_3467267_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000001516 126.0
CMS1_k127_3468954_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009679 566.0
CMS1_k127_3468954_1 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001138 273.0
CMS1_k127_3468954_2 transport system auxiliary component K18480 - - 0.000000000000000000000000000000000000000000000000000000000000372 216.0
CMS1_k127_3476020_0 nitrite reductase K15864 - 1.7.2.1,1.7.99.1 0.0 1072.0
CMS1_k127_3476020_1 Cytochrome c554 and c-prime - - - 2.363e-317 979.0
CMS1_k127_3476020_10 Heme d1 biosynthesis protein NirF K19345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 528.0
CMS1_k127_3476020_11 Glycosyl transferase family, helical bundle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 477.0
CMS1_k127_3476020_12 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 484.0
CMS1_k127_3476020_13 COG1648 Siroheme synthase (precorrin-2 oxidase ferrochelatase domain) K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 331.0
CMS1_k127_3476020_14 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 326.0
CMS1_k127_3476020_15 cytochrome C K02305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 319.0
CMS1_k127_3476020_16 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 289.0
CMS1_k127_3476020_17 ABC-type phosphate phosphonate transport system periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009598 257.0
CMS1_k127_3476020_18 Abc transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000001324 201.0
CMS1_k127_3476020_19 - - - - 0.0000000000000000000000000000000000000000000000000001187 188.0
CMS1_k127_3476020_2 Nitric oxide reductase K04561 - 1.7.2.5 1.324e-283 875.0
CMS1_k127_3476020_20 - - - - 0.0000000000000000000000000000000000000000000000000002497 186.0
CMS1_k127_3476020_21 - - - - 0.0000000000000000000000000000000000000000000000000004768 185.0
CMS1_k127_3476020_22 Cytochrome c - - - 0.00000000000000000000000000000000000000000000006809 170.0
CMS1_k127_3476020_24 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000007405 166.0
CMS1_k127_3476020_25 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000000000000005308 116.0
CMS1_k127_3476020_26 - - - - 0.000000000000000000000000000577 113.0
CMS1_k127_3476020_27 - - - - 0.0000000000000000000000009534 104.0
CMS1_k127_3476020_3 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 3.437e-240 748.0
CMS1_k127_3476020_4 Heme d1 biosynthesis protein NirJ - - - 4.503e-234 726.0
CMS1_k127_3476020_5 Major Facilitator Superfamily - - - 1.664e-211 661.0
CMS1_k127_3476020_6 Phosphotransferase enzyme family K00899 - 2.7.1.100 4.448e-205 644.0
CMS1_k127_3476020_7 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 593.0
CMS1_k127_3476020_8 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 587.0
CMS1_k127_3476020_9 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 573.0
CMS1_k127_3479786_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1135.0
CMS1_k127_3479786_1 response regulator K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000347 238.0
CMS1_k127_3479786_2 iron ion homeostasis K04758 - - 0.00000000000000000000000000001577 119.0
CMS1_k127_3479786_3 outer membrane porin, OprD family - - - 0.0000000000000000000002008 99.0
CMS1_k127_3488137_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1312.0
CMS1_k127_3488137_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 1.769e-315 973.0
CMS1_k127_3488137_10 Pfam Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 304.0
CMS1_k127_3488137_11 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002725 256.0
CMS1_k127_3488137_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002145 234.0
CMS1_k127_3488137_13 AMMECR1 K09141 - - 0.00000000000000000000000000000000000000000000008119 171.0
CMS1_k127_3488137_14 COG1393 Arsenate reductase and related K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000001657 161.0
CMS1_k127_3488137_15 HD domain K07814 - - 0.00000000000000001048 93.0
CMS1_k127_3488137_2 Aminotransferase - - - 2.013e-236 736.0
CMS1_k127_3488137_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 595.0
CMS1_k127_3488137_4 pyridine nucleotide-disulfide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 565.0
CMS1_k127_3488137_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 478.0
CMS1_k127_3488137_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009318 448.0
CMS1_k127_3488137_7 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 432.0
CMS1_k127_3488137_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 366.0
CMS1_k127_3488137_9 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 321.0
CMS1_k127_3494266_0 7TMR-DISM extracellular 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 347.0
CMS1_k127_3494266_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000009647 220.0
CMS1_k127_3494266_2 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000002579 149.0
CMS1_k127_3494266_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000007266 136.0
CMS1_k127_3500304_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1542.0
CMS1_k127_3500304_1 periplasmic copper-binding protein NosD K07218 - - 4.076e-221 689.0
CMS1_k127_3500304_2 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007195 461.0
CMS1_k127_3500304_3 hmm pf00037 K02573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 434.0
CMS1_k127_3500304_4 phosphorelay sensor kinase activity K01768,K03406,K07642 - 2.7.13.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000144 273.0
CMS1_k127_3500304_5 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000005995 227.0
CMS1_k127_3500304_6 Ferredoxin-type protein, NapH MauN family K02574 - - 0.0000000000000000000000000000000000000000000000000000000001491 204.0
CMS1_k127_3500304_7 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000251 206.0
CMS1_k127_3520868_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.631e-211 660.0
CMS1_k127_3520868_1 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 488.0
CMS1_k127_3520868_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 458.0
CMS1_k127_3520868_3 flagellar basal body K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 450.0
CMS1_k127_3520868_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008817 294.0
CMS1_k127_3520868_5 - - - - 0.000000000000000000000000000000000000000002702 155.0
CMS1_k127_3520868_6 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000001485 127.0
CMS1_k127_3520868_7 - - - - 0.000000000000003276 79.0
CMS1_k127_352544_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1227.0
CMS1_k127_352544_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 2.783e-214 669.0
CMS1_k127_352544_2 apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 577.0
CMS1_k127_352544_3 Potassium channel protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 424.0
CMS1_k127_352544_4 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 380.0
CMS1_k127_352544_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 312.0
CMS1_k127_352544_6 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 285.0
CMS1_k127_352544_7 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000001607 119.0
CMS1_k127_352544_8 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000005966 116.0
CMS1_k127_352544_9 Preprotein translocase K03210 - - 0.000000000000000000000000002977 112.0
CMS1_k127_3629975_0 Belongs to the DEAD box helicase family K05592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.6.4.13 7.857e-270 836.0
CMS1_k127_3629975_1 outer membrane porin, OprD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 375.0
CMS1_k127_3629975_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 319.0
CMS1_k127_3629975_3 outer membrane porin, OprD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002807 286.0
CMS1_k127_3629975_4 (HIT) family - - - 0.000000000000000000000000000000000000000000000000000000000005965 209.0
CMS1_k127_3629975_5 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000001279 190.0
CMS1_k127_3629975_6 - - - - 0.00000000000000000000004074 100.0
CMS1_k127_3629975_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000003286 83.0
CMS1_k127_3660131_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1454.0
CMS1_k127_3660131_1 Ammonium Transporter K03320 - - 3.665e-240 745.0
CMS1_k127_3660131_10 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000000001875 209.0
CMS1_k127_3660131_11 - - - - 0.00000000000000000000000000000000000000000000000000001302 191.0
CMS1_k127_3660131_13 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000001912 143.0
CMS1_k127_3660131_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 7.059e-223 692.0
CMS1_k127_3660131_3 Ammonium Transporter K03320 - - 1.159e-216 676.0
CMS1_k127_3660131_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 4.052e-205 642.0
CMS1_k127_3660131_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 595.0
CMS1_k127_3660131_6 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 602.0
CMS1_k127_3660131_7 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 499.0
CMS1_k127_3660131_8 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 438.0
CMS1_k127_3660131_9 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001708 276.0
CMS1_k127_3713308_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1087.0
CMS1_k127_3713308_1 Sulfatase-modifying factor enzyme 1 - - - 0.0 1060.0
CMS1_k127_3713308_10 flagellar assembly protein FliH K02411 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 297.0
CMS1_k127_3713308_2 The M ring may be actively involved in energy transduction K02409 - - 2.039e-263 821.0
CMS1_k127_3713308_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 9.997e-226 703.0
CMS1_k127_3713308_4 Chorismate mutase prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 1.376e-195 614.0
CMS1_k127_3713308_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 590.0
CMS1_k127_3713308_6 flagellar motor switch protein K02410 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 572.0
CMS1_k127_3713308_7 permease K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 528.0
CMS1_k127_3713308_8 HAD-superfamily hydrolase, subfamily IIA K02566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 416.0
CMS1_k127_3713308_9 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 334.0
CMS1_k127_3725106_0 chemotaxis protein K03407 - 2.7.13.3 1.608e-264 831.0
CMS1_k127_3725106_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 449.0
CMS1_k127_3725106_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 368.0
CMS1_k127_3725106_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 361.0
CMS1_k127_3725106_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 320.0
CMS1_k127_3725106_5 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 265.0
CMS1_k127_3725106_6 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000001203 214.0
CMS1_k127_3726898_0 cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 469.0
CMS1_k127_3726898_1 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000001559 175.0
CMS1_k127_3726898_2 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000000000000004781 98.0
CMS1_k127_3749_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.534e-234 729.0
CMS1_k127_3749_1 Oxidoreductase K00174 - 1.2.7.11,1.2.7.3 7.863e-228 707.0
CMS1_k127_3749_10 - - - - 0.0000000000000000000001645 98.0
CMS1_k127_3749_11 - - - - 0.0000000000000000000176 93.0
CMS1_k127_3749_2 lytic murein transglycosylase K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 602.0
CMS1_k127_3749_3 Oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 554.0
CMS1_k127_3749_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 465.0
CMS1_k127_3749_5 oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 339.0
CMS1_k127_3749_6 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 334.0
CMS1_k127_3749_7 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 329.0
CMS1_k127_3749_8 2-oxoglutarate acceptor oxidoreductase K00176 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000002705 207.0
CMS1_k127_3749_9 YGGT family K02221 - - 0.000000000000000000000000000000000000000008063 155.0
CMS1_k127_3751750_0 Acts as a magnesium transporter K06213 - - 3.432e-240 747.0
CMS1_k127_3751750_1 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 605.0
CMS1_k127_3751750_10 Ester cyclase - - - 0.0000000000000000000000000000000000000001573 154.0
CMS1_k127_3751750_12 Histidine kinase - - - 0.0000000000000003609 79.0
CMS1_k127_3751750_2 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 593.0
CMS1_k127_3751750_3 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 559.0
CMS1_k127_3751750_4 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 543.0
CMS1_k127_3751750_5 polyphosphate kinase K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 454.0
CMS1_k127_3751750_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 331.0
CMS1_k127_3751750_7 CorA-like Mg2 transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 323.0
CMS1_k127_3751750_8 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000008718 233.0
CMS1_k127_3751750_9 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000004141 179.0
CMS1_k127_3759890_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 5.008e-256 795.0
CMS1_k127_3759890_1 Belongs to the peptidase M16 family - - - 1.469e-242 753.0
CMS1_k127_3759890_11 Outer membrane protein beta-barrel domain K12980 - - 0.0000001318 62.0
CMS1_k127_3759890_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 603.0
CMS1_k127_3759890_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 538.0
CMS1_k127_3759890_4 dehydrogenase K00076 - 1.1.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 485.0
CMS1_k127_3759890_5 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 478.0
CMS1_k127_3759890_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 402.0
CMS1_k127_3759890_7 Haemolysin-III related K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004814 271.0
CMS1_k127_3759890_8 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000005399 259.0
CMS1_k127_3759890_9 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001765 256.0
CMS1_k127_3787571_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002939 265.0
CMS1_k127_3787571_1 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002069 258.0
CMS1_k127_3787571_2 acetyltransferase - - - 0.000007822 48.0
CMS1_k127_3811976_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 2.057e-303 937.0
CMS1_k127_3811976_1 Type II and III secretion system protein K02453 - - 3.485e-211 667.0
CMS1_k127_3811976_10 hmm pf01205 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001579 255.0
CMS1_k127_3811976_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006402 231.0
CMS1_k127_3811976_12 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000002399 178.0
CMS1_k127_3811976_13 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.000000000000000000000000000000002825 138.0
CMS1_k127_3811976_2 Type II secretion system K02455,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 605.0
CMS1_k127_3811976_3 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 527.0
CMS1_k127_3811976_4 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 482.0
CMS1_k127_3811976_5 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K18284 - 3.2.2.30,3.2.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 443.0
CMS1_k127_3811976_6 Transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 409.0
CMS1_k127_3811976_7 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 378.0
CMS1_k127_3811976_8 ATPase (AAA K01714,K12283 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008411 378.0
CMS1_k127_3811976_9 proteins homologs of microcin C7 resistance protein MccF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002104 262.0
CMS1_k127_3824214_0 cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 1.337e-265 827.0
CMS1_k127_3824214_1 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 460.0
CMS1_k127_3824214_2 cytochrome - - - 0.00000000000000000000000000000000000000000003226 162.0
CMS1_k127_3824214_3 Cytochrome oxidase maturation protein - - - 0.0000000000000000000000000000000006855 130.0
CMS1_k127_3828551_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 2.04e-267 832.0
CMS1_k127_3828551_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 2.05e-233 727.0
CMS1_k127_3828551_10 response regulator - - - 0.0000000001607 66.0
CMS1_k127_3828551_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 1.135e-208 650.0
CMS1_k127_3828551_3 Jag_N K06346 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 395.0
CMS1_k127_3828551_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007284 280.0
CMS1_k127_3828551_5 Could be involved in insertion of integral membrane proteins into the membrane - - - 0.00000000000000000000000000000000000000000000000000000000000007054 213.0
CMS1_k127_3828551_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
CMS1_k127_3828551_7 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000009137 196.0
CMS1_k127_3828551_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000000000008713 138.0
CMS1_k127_3828551_9 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000000627 87.0
CMS1_k127_3849010_0 UPF0313 protein - - - 0.0 1140.0
CMS1_k127_3849010_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.855e-231 726.0
CMS1_k127_3849010_2 Inorganic pyrophosphatase K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 552.0
CMS1_k127_3849010_3 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 502.0
CMS1_k127_3849010_4 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 340.0
CMS1_k127_3849010_5 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 313.0
CMS1_k127_3853073_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 2089.0
CMS1_k127_3853073_1 Mg chelatase-related protein K07391 - - 5.505e-261 811.0
CMS1_k127_3853073_2 Cytochrome c oxidase accessory protein - - - 1.904e-244 761.0
CMS1_k127_3853073_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.069e-216 678.0
CMS1_k127_3853073_4 Belongs to the UPF0324 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 591.0
CMS1_k127_3853073_5 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 485.0
CMS1_k127_3853073_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 367.0
CMS1_k127_3853073_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006329 278.0
CMS1_k127_3884272_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 4.666e-196 615.0
CMS1_k127_3884272_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 486.0
CMS1_k127_3884272_2 phosphorylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 308.0
CMS1_k127_3884272_3 - - - - 0.000000000000000000000000000000000000002586 147.0
CMS1_k127_3884272_4 Ankyrin repeats (3 copies) - - - 0.00000000000005767 83.0
CMS1_k127_3942820_0 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000002432 207.0
CMS1_k127_3942820_1 Chemotaxis protein CheW K03408 - - 0.0000000000000000000000000000000000000000000000000000000001981 207.0
CMS1_k127_3942820_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000006982 170.0
CMS1_k127_3942820_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0006215 44.0
CMS1_k127_3965592_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1145.0
CMS1_k127_3965592_1 von Willebrand factor, type A K07114 - - 1.244e-218 696.0
CMS1_k127_3965592_10 curli production assembly transport component CsgG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001669 271.0
CMS1_k127_3965592_11 Ferredoxin K05337 - - 0.000000000000000000000000000000000000000000000001291 173.0
CMS1_k127_3965592_12 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000001284 164.0
CMS1_k127_3965592_2 Histidine kinase K02484 - 2.7.13.3 4.266e-215 674.0
CMS1_k127_3965592_3 Guanosine pentaphosphate phosphohydrolase K01524 - 3.6.1.11,3.6.1.40 2.347e-213 672.0
CMS1_k127_3965592_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 557.0
CMS1_k127_3965592_5 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 537.0
CMS1_k127_3965592_6 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 494.0
CMS1_k127_3965592_7 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 464.0
CMS1_k127_3965592_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 432.0
CMS1_k127_3965592_9 prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 426.0
CMS1_k127_3992015_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 541.0
CMS1_k127_3999867_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1133.0
CMS1_k127_3999867_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.795e-281 866.0
CMS1_k127_3999867_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 590.0
CMS1_k127_3999867_3 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009676 572.0
CMS1_k127_3999867_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 467.0
CMS1_k127_3999867_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 407.0
CMS1_k127_3999867_6 potassium channel protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000008072 204.0
CMS1_k127_3999867_7 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000201 190.0
CMS1_k127_3999867_8 - - - - 0.000000000000000000000000000002397 124.0
CMS1_k127_4035177_0 ABC transporter K11085 - - 5.206e-288 892.0
CMS1_k127_4035177_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 3.506e-274 846.0
CMS1_k127_4035177_2 Glycerol-3-phosphate dehydrogenase K11473 - - 1.762e-260 804.0
CMS1_k127_4035177_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 477.0
CMS1_k127_4035177_4 lipopolysaccharide heptosyltransferase K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 398.0
CMS1_k127_4035177_5 Sulfatase - - - 0.000000000000000000004145 95.0
CMS1_k127_4035177_6 7TMR-DISM extracellular 2 - - - 0.00000001221 61.0
CMS1_k127_4036244_0 radical SAM domain protein K03716 - 4.1.99.14 7.509e-234 727.0
CMS1_k127_4036244_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 3.497e-228 711.0
CMS1_k127_4036244_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.409e-201 636.0
CMS1_k127_4036244_3 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 459.0
CMS1_k127_4036244_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 366.0
CMS1_k127_4036244_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 328.0
CMS1_k127_4036244_6 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000002011 239.0
CMS1_k127_4036244_7 Transcriptional regulator K03892 - - 0.000000000000000000000000000000000000000000003937 166.0
CMS1_k127_4036244_8 - - - - 0.0000000000000000000000000000000000000002687 149.0
CMS1_k127_4036244_9 Histidine kinase A domain protein - - - 0.00000000000000000000000000004942 117.0
CMS1_k127_4058013_0 PFAM biotin lipoyl attachment domain-containing protein K01960 - 6.4.1.1 0.0 1102.0
CMS1_k127_4058013_1 COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit K01572 - 4.1.1.3 5.866e-262 809.0
CMS1_k127_4058013_2 Response regulator receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 529.0
CMS1_k127_4058013_3 molybdopterin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 508.0
CMS1_k127_4058013_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000159 278.0
CMS1_k127_4058013_5 Molecular chaperone. Has ATPase activity K04079 - - 0.000000000000000000000000000000000000000000000000000000000000000004332 227.0
CMS1_k127_4058013_7 Domain of unknown function (DUF3817) - - - 0.00000000000000000000000000000000000000000001555 162.0
CMS1_k127_4058013_8 - - - - 0.0000000000000000000000000000000000000000002608 159.0
CMS1_k127_4058013_9 Oxaloacetate decarboxylase, gamma chain K01573 - 4.1.1.3 0.0000000000000000000004833 97.0
CMS1_k127_4066936_0 - - - - 0.00000000000000000000000000000000000000000006597 162.0
CMS1_k127_4066936_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.4.12 0.00000000003075 75.0
CMS1_k127_4066936_2 PcfJ-like protein - - - 0.00003596 56.0
CMS1_k127_4066936_3 - - - - 0.0008363 50.0
CMS1_k127_4070510_0 TRAP transporter, DctM subunit - - - 2.798e-218 683.0
CMS1_k127_4070510_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 3.932e-200 625.0
CMS1_k127_4070510_2 Mur ligase middle domain K01929 - 6.3.2.10 2.839e-195 614.0
CMS1_k127_4070510_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 373.0
CMS1_k127_4070510_4 HIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 293.0
CMS1_k127_4070510_5 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004843 260.0
CMS1_k127_4070510_6 - - - - 0.000000000000000000000000000000000000000000000000000000000003032 212.0
CMS1_k127_4070510_7 Cold-shock protein K03704 - - 0.000000000000000000000000000000000000001218 148.0
CMS1_k127_4070510_8 FMN binding - - - 0.00000000000009024 72.0
CMS1_k127_4070510_9 - - - - 0.000003396 49.0
CMS1_k127_4148993_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 364.0
CMS1_k127_4148993_1 NAD+ binding K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 346.0
CMS1_k127_4148993_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001053 197.0
CMS1_k127_4148993_3 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04068 - 1.97.1.4 0.00000000000000000000000000002085 124.0
CMS1_k127_4165607_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 3.755e-206 647.0
CMS1_k127_4165607_1 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 572.0
CMS1_k127_4165607_2 COGs COG3864 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 542.0
CMS1_k127_4165607_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 543.0
CMS1_k127_4165607_4 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 368.0
CMS1_k127_4165607_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000005956 192.0
CMS1_k127_4165607_7 lyase activity - - - 0.000000000000000000000001906 105.0
CMS1_k127_4184244_0 TIGRFAM Phage - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 429.0
CMS1_k127_4184244_1 - - - - 0.000000000000000000000000000000000000000009632 163.0
CMS1_k127_4184244_10 Uncharacterized protein conserved in bacteria (DUF2213) K09960 - - 0.00000000000000000164 98.0
CMS1_k127_4184244_12 Baseplate J-like protein - - - 0.0000000000005645 80.0
CMS1_k127_4184244_13 Protein of unknown function (DUF1367) - - - 0.0000000000005699 74.0
CMS1_k127_4184244_14 Protein of unknown function (DUF1353) - - - 0.000000000001507 74.0
CMS1_k127_4184244_15 - - - - 0.00000000001545 71.0
CMS1_k127_4184244_16 - - - - 0.00000000001635 74.0
CMS1_k127_4184244_17 lysozyme K01185 - 3.2.1.17 0.00000000004086 69.0
CMS1_k127_4184244_18 - - - - 0.0000000005705 68.0
CMS1_k127_4184244_2 Protein of unknown function (DUF1071) - - - 0.00000000000000000000000000000000000003513 152.0
CMS1_k127_4184244_20 Protein of unknown function (DUF4054) - - - 0.000001661 55.0
CMS1_k127_4184244_22 - - - - 0.000008844 51.0
CMS1_k127_4184244_23 Phage tail tape measure protein - - - 0.00001785 57.0
CMS1_k127_4184244_24 Baseplate assembly protein - - - 0.0004093 49.0
CMS1_k127_4184244_25 T5orf172 - - - 0.0004761 48.0
CMS1_k127_4184244_26 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0005763 44.0
CMS1_k127_4184244_28 - - - - 0.0007801 47.0
CMS1_k127_4184244_3 TIGRFAM phage-associated protein, HI1409 family K09961 - - 0.0000000000000000000000000000000000009319 155.0
CMS1_k127_4184244_4 DnaD domain protein - - - 0.000000000000000000000000000000000001455 146.0
CMS1_k127_4184244_5 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000001221 135.0
CMS1_k127_4184244_6 NinG protein - - - 0.00000000000000000000000000004141 123.0
CMS1_k127_4184244_7 Phage Mu protein F like protein - - - 0.000000000000000000001387 104.0
CMS1_k127_4184244_8 - - - - 0.00000000000000000008629 98.0
CMS1_k127_4184244_9 Uncharacterized protein conserved in bacteria (DUF2184) - - - 0.00000000000000000009708 100.0
CMS1_k127_4190930_0 threonine synthase K01733 - 4.2.3.1 5.572e-283 873.0
CMS1_k127_4190930_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 1.973e-231 719.0
CMS1_k127_4190930_10 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000000000000000000000000001822 183.0
CMS1_k127_4190930_11 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000001028 170.0
CMS1_k127_4190930_12 - - - - 0.00000000000000000000000000000000000000000004904 163.0
CMS1_k127_4190930_13 RDD family - - - 0.000000000000000004391 90.0
CMS1_k127_4190930_2 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 601.0
CMS1_k127_4190930_3 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 582.0
CMS1_k127_4190930_4 EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 495.0
CMS1_k127_4190930_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 488.0
CMS1_k127_4190930_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 410.0
CMS1_k127_4190930_7 Cell division protein FtsX K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 381.0
CMS1_k127_4190930_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 367.0
CMS1_k127_4190930_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 322.0
CMS1_k127_4249185_0 GTP-binding protein K06207 - - 0.0 1161.0
CMS1_k127_4249185_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 1.002e-205 641.0
CMS1_k127_4249185_10 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 259.0
CMS1_k127_4249185_11 lactate metabolic process - - - 0.000000000000000000000000000000000000000000000002899 176.0
CMS1_k127_4249185_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 530.0
CMS1_k127_4249185_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 469.0
CMS1_k127_4249185_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 475.0
CMS1_k127_4249185_5 chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 453.0
CMS1_k127_4249185_6 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 407.0
CMS1_k127_4249185_7 COGs COG2829 Outer membrane phospholipase A K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 384.0
CMS1_k127_4249185_8 Zn-ribbon-containing protein involved in phosphonate metabolism K06193 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 314.0
CMS1_k127_4249185_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000008986 258.0
CMS1_k127_4262804_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 6.502e-302 930.0
CMS1_k127_4262804_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 5.962e-232 722.0
CMS1_k127_4262804_10 helicase activity K05592,K06877,K07462,K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000002136 221.0
CMS1_k127_4262804_2 S-adenosylmethionine-dependent methyltransferase - - - 5.521e-204 640.0
CMS1_k127_4262804_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 575.0
CMS1_k127_4262804_4 Peptidase s1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 556.0
CMS1_k127_4262804_5 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 522.0
CMS1_k127_4262804_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 450.0
CMS1_k127_4262804_7 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 334.0
CMS1_k127_4262804_8 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 319.0
CMS1_k127_4262804_9 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 302.0
CMS1_k127_4274197_0 Belongs to the DegT DnrJ EryC1 family K13017 - 2.6.1.98 1.73e-202 633.0
CMS1_k127_4274197_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 568.0
CMS1_k127_4274197_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 520.0
CMS1_k127_4274197_3 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 499.0
CMS1_k127_4274197_4 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 453.0
CMS1_k127_4274197_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 374.0
CMS1_k127_4274197_6 cytochrome c class I - - - 0.00000000000000000000000000000000000000000000008354 170.0
CMS1_k127_4274197_7 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0000000000000000000000000000000000002285 141.0
CMS1_k127_4274197_8 phosphate-selective porin O and P - - - 0.00000000002763 75.0
CMS1_k127_4274197_9 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.0000000009077 66.0
CMS1_k127_4290330_0 Sulfatase - - - 7.751e-253 790.0
CMS1_k127_4290330_1 LicD family K07271 - - 0.000000000000000000000000000000000000000000000000000000000000001197 228.0
CMS1_k127_4290330_2 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000002739 74.0
CMS1_k127_4341237_0 Ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1342.0
CMS1_k127_4341237_1 HI0933-like protein K07007 - - 2.737e-201 633.0
CMS1_k127_4341237_11 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00366 - 1.7.7.1 0.000000000000000000003175 93.0
CMS1_k127_4341237_12 Anaerobic ribonucleoside-triphosphate reductase - - - 0.00000000000000000008151 90.0
CMS1_k127_4341237_2 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 563.0
CMS1_k127_4341237_3 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 524.0
CMS1_k127_4341237_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 373.0
CMS1_k127_4341237_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 373.0
CMS1_k127_4341237_6 chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 365.0
CMS1_k127_4341237_7 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
CMS1_k127_4341237_8 Dtw domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 306.0
CMS1_k127_4341237_9 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 301.0
CMS1_k127_437646_0 Hydrogenase K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 418.0
CMS1_k127_437646_1 hydrogenase assembly chaperone HypC K04653 - - 0.00000000000000000000000000000000005177 135.0
CMS1_k127_437646_2 small multidrug export protein - - - 0.00000000000000000000000000000001496 134.0
CMS1_k127_437646_3 Belongs to the HypD family K04654 - - 0.0000000000000000000002973 97.0
CMS1_k127_437646_4 Hydrogenase maturation protease K03605 - - 0.000001775 51.0
CMS1_k127_4438032_0 P-loop containing region of AAA domain K03546 - - 0.0 1031.0
CMS1_k127_4438032_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.481e-232 724.0
CMS1_k127_4438032_2 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 2.485e-196 616.0
CMS1_k127_4438032_3 forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 418.0
CMS1_k127_4438032_4 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 405.0
CMS1_k127_4438032_5 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 404.0
CMS1_k127_4438032_6 Histidine kinase K13040 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 325.0
CMS1_k127_4438032_7 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000002353 179.0
CMS1_k127_4438032_8 protein involved in exopolysaccharide biosynthesis - - - 0.0000000000003191 76.0
CMS1_k127_448686_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1605.0
CMS1_k127_448686_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000007777 125.0
CMS1_k127_4488871_0 Thiol disulfide interchange protein K04084 - 1.8.1.8 2.309e-220 692.0
CMS1_k127_4488871_1 cheY-homologous receiver domain - - - 0.0000000000000000000000001015 115.0
CMS1_k127_4578678_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 5.489e-218 681.0
CMS1_k127_4578678_1 lipopolysaccharide core region biosynthetic process - - - 1.218e-201 634.0
CMS1_k127_4578678_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000002383 216.0
CMS1_k127_4578678_3 Cytidylyltransferase-like K00980 - 2.7.7.39 0.00000000000000000000000000000000000000007036 152.0
CMS1_k127_460272_0 o-acetylhomoserine K01740 - 2.5.1.49 2.194e-243 754.0
CMS1_k127_460272_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 2.925e-210 657.0
CMS1_k127_460272_10 cytochrome - - - 0.00000000000000000000000003944 112.0
CMS1_k127_460272_11 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.00000000000000005929 81.0
CMS1_k127_460272_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 559.0
CMS1_k127_460272_3 hydrolase K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 443.0
CMS1_k127_460272_4 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 397.0
CMS1_k127_460272_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 362.0
CMS1_k127_460272_6 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 286.0
CMS1_k127_460272_7 COG0436 Aspartate tyrosine aromatic aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002327 234.0
CMS1_k127_460272_8 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000051 206.0
CMS1_k127_460272_9 Histidine kinase K13040 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000007707 212.0
CMS1_k127_4617002_0 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 2.789e-235 730.0
CMS1_k127_4617002_1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 461.0
CMS1_k127_4617002_2 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001869 250.0
CMS1_k127_4617002_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000247 235.0
CMS1_k127_4617002_4 Flagellar hook protein flgE - - - 0.00000000000000000000000000000000000003635 145.0
CMS1_k127_4675016_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.006e-241 750.0
CMS1_k127_4675016_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 464.0
CMS1_k127_4675016_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000000001233 153.0
CMS1_k127_4675016_2 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 450.0
CMS1_k127_4675016_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 320.0
CMS1_k127_4675016_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001299 278.0
CMS1_k127_4675016_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001983 250.0
CMS1_k127_4675016_6 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000000009948 217.0
CMS1_k127_4675016_7 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000132 219.0
CMS1_k127_4675016_8 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000000000000000001002 207.0
CMS1_k127_4675016_9 Chorismate mutase K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000001163 166.0
CMS1_k127_4697831_0 Endoribonuclease that initiates mRNA decay K18682 - - 2.98e-272 844.0
CMS1_k127_4697831_1 Belongs to the DegT DnrJ EryC1 family K15895 - 2.6.1.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 620.0
CMS1_k127_4697831_10 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 345.0
CMS1_k127_4697831_11 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000879 299.0
CMS1_k127_4697831_12 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 285.0
CMS1_k127_4697831_13 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002095 259.0
CMS1_k127_4697831_14 thioesterase K02614 - - 0.0000000000000000000000000000000000000000000000000000000000000003993 222.0
CMS1_k127_4697831_15 - - - - 0.000000000000000000000000000000000000000000000001172 177.0
CMS1_k127_4697831_16 Domain of unknown function (DUF2018) - - - 0.0000000000000000000000000000000000002705 141.0
CMS1_k127_4697831_17 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000007601 117.0
CMS1_k127_4697831_18 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000001975 67.0
CMS1_k127_4697831_2 COGs COG0665 Glycine D-amino acid oxidase (deaminating) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
CMS1_k127_4697831_3 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 526.0
CMS1_k127_4697831_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 524.0
CMS1_k127_4697831_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 522.0
CMS1_k127_4697831_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 450.0
CMS1_k127_4697831_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 449.0
CMS1_k127_4697831_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 414.0
CMS1_k127_4697831_9 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 374.0
CMS1_k127_4706946_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1160.0
CMS1_k127_4706946_1 Belongs to the aldehyde dehydrogenase family - - - 1.064e-259 805.0
CMS1_k127_4706946_10 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000001845 239.0
CMS1_k127_4706946_11 Protein of unknown function (DUF523) - - - 0.000000000000000000000000000000000000000000000000000000004894 201.0
CMS1_k127_4706946_12 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000001559 175.0
CMS1_k127_4706946_13 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000001834 176.0
CMS1_k127_4706946_14 Thioredoxin - - - 0.0000000000000000000000000000000000002469 143.0
CMS1_k127_4706946_15 Transcriptional regulatory protein, C terminal - - - 0.00000000001861 68.0
CMS1_k127_4706946_2 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 490.0
CMS1_k127_4706946_3 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 456.0
CMS1_k127_4706946_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 410.0
CMS1_k127_4706946_5 COG0642 Signal transduction histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 371.0
CMS1_k127_4706946_6 PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 343.0
CMS1_k127_4706946_7 endonuclease III K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
CMS1_k127_4706946_9 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001511 239.0
CMS1_k127_4732914_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 4.642e-235 731.0
CMS1_k127_4732914_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 521.0
CMS1_k127_4732914_2 ABC transporter, ATP-binding protein K01990,K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 428.0
CMS1_k127_4732914_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 407.0
CMS1_k127_4732914_4 tigr02757 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 306.0
CMS1_k127_4732914_5 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001982 241.0
CMS1_k127_4732914_6 ATPase or kinase K06925 - - 0.00000000000000000000000000000000000000000000000000000000001797 208.0
CMS1_k127_4732914_7 S4 domain protein - - - 0.0000000000000000000000000000000001005 134.0
CMS1_k127_4732914_8 - - - - 0.00000000005062 71.0
CMS1_k127_4732914_9 Hpt sensor hybrid histidine kinase - - - 0.0000000009636 63.0
CMS1_k127_4750881_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 557.0
CMS1_k127_4750881_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 415.0
CMS1_k127_4750881_2 - - - - 0.0000000000000000000000000000000000001942 143.0
CMS1_k127_475228_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.594e-239 745.0
CMS1_k127_4864481_0 o-acetylhomoserine K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 597.0
CMS1_k127_4864481_1 dinuclear metal center protein, YbgI K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 432.0
CMS1_k127_4864481_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 411.0
CMS1_k127_4864481_3 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 376.0
CMS1_k127_4864481_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 351.0
CMS1_k127_4864481_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 286.0
CMS1_k127_4864481_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007262 276.0
CMS1_k127_4864481_7 COG1579 Zn-ribbon protein possibly nucleic acid-binding K07164,K22391 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006968 275.0
CMS1_k127_4864481_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000001366 145.0
CMS1_k127_4864481_9 Domain of unknown function (DUF4395) - - - 0.0000000000000000000003238 101.0
CMS1_k127_4949595_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 471.0
CMS1_k127_4949595_1 Protein of unknown function (DUF808) K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 390.0
CMS1_k127_4949595_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 340.0
CMS1_k127_4949595_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000003797 176.0
CMS1_k127_4949595_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000004819 160.0
CMS1_k127_4949595_5 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000008118 120.0
CMS1_k127_4949595_6 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000002104 50.0
CMS1_k127_4978006_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 379.0
CMS1_k127_4978006_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000005296 136.0
CMS1_k127_4978083_0 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.0 1759.0
CMS1_k127_4978083_1 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 565.0
CMS1_k127_4978083_10 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003048 281.0
CMS1_k127_4978083_11 nitrate reductase K02570 - - 0.00000000000000000000000000000000000000000000000000000000000000007325 223.0
CMS1_k127_4978083_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000002901 214.0
CMS1_k127_4978083_13 - - - - 0.00000000000000000000000000000001177 128.0
CMS1_k127_4978083_2 TIGRFAM MauM NapG family ferredoxin-type protein K02573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 483.0
CMS1_k127_4978083_3 Ferredoxin-type protein, NapH MauN family K02574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 474.0
CMS1_k127_4978083_4 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 467.0
CMS1_k127_4978083_5 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 462.0
CMS1_k127_4978083_6 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 396.0
CMS1_k127_4978083_7 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 343.0
CMS1_k127_4978083_8 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 308.0
CMS1_k127_4978083_9 ferredoxin-type protein NapF K02572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 287.0
CMS1_k127_5002324_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.651e-309 951.0
CMS1_k127_5002324_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 516.0
CMS1_k127_5002324_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001781 245.0
CMS1_k127_5002324_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000301 159.0
CMS1_k127_5034814_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 537.0
CMS1_k127_5034814_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 332.0
CMS1_k127_5034814_2 ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000004501 259.0
CMS1_k127_5034814_3 - - - - 0.000000000000000000000000000000000000000000000000000009198 190.0
CMS1_k127_5034814_4 Peptidase M50 - - - 0.000000000000000000000000001285 112.0
CMS1_k127_5077876_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000005311 74.0
CMS1_k127_5077876_2 Uncharacterized lipoprotein K07286 - - 0.0000001697 60.0
CMS1_k127_5107970_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 9.196e-195 609.0
CMS1_k127_5107970_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 568.0
CMS1_k127_5107970_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 458.0
CMS1_k127_5107970_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 344.0
CMS1_k127_5107970_4 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 333.0
CMS1_k127_5107970_5 acetyltransferase - - - 0.00000000000000000000000000003117 118.0
CMS1_k127_5126836_0 AAA domain, putative AbiEii toxin, Type IV TA system K06926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003397 259.0
CMS1_k127_5126836_1 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000002436 203.0
CMS1_k127_5126836_2 RloB-like protein - - - 0.000000000000000000002447 102.0
CMS1_k127_5126836_3 Formate/nitrite transporter K21993 - - 0.000000000000004509 76.0
CMS1_k127_5126836_4 - - - - 0.00000001832 64.0
CMS1_k127_5160246_0 domain protein K09944 - - 5.355e-230 719.0
CMS1_k127_5160246_1 Response regulator receiver - - - 0.00000000000000000000000000022 118.0
CMS1_k127_5345586_0 flagellar motor switch protein K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 595.0
CMS1_k127_5345586_1 Belongs to the sigma-70 factor family K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 390.0
CMS1_k127_5345586_2 flagellar motor switch protein K02417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002821 255.0
CMS1_k127_5345586_4 Belongs to the ParA family K04562 - - 0.00000006964 54.0
CMS1_k127_5445312_0 Na Pi-Cotransporter K03324 - - 1.352e-209 664.0
CMS1_k127_5445312_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 302.0
CMS1_k127_5445312_2 COG0474 Cation transport ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000001294 218.0
CMS1_k127_5445312_3 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000009395 213.0
CMS1_k127_5445312_4 COGs COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000001046 70.0
CMS1_k127_5445312_6 LigT like Phosphoesterase K01975 - 3.1.4.58 0.0003508 50.0
CMS1_k127_5459586_0 Diguanylate cyclase - - - 4.81e-274 860.0
CMS1_k127_5459586_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.578e-262 810.0
CMS1_k127_5459586_10 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000005854 176.0
CMS1_k127_5459586_11 FlaG protein K06603 - - 0.000000000000000000000000000000000000003983 150.0
CMS1_k127_5459586_12 - - - - 0.000000000000000000000000000000000000004214 147.0
CMS1_k127_5459586_14 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000001759 120.0
CMS1_k127_5459586_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 9.079e-244 757.0
CMS1_k127_5459586_3 na -driven multidrug efflux - - - 2.755e-212 666.0
CMS1_k127_5459586_4 Major Facilitator - - - 9.654e-206 645.0
CMS1_k127_5459586_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 514.0
CMS1_k127_5459586_6 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 429.0
CMS1_k127_5459586_7 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 364.0
CMS1_k127_5459586_8 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 340.0
CMS1_k127_5459586_9 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000514 248.0
CMS1_k127_5467600_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2013.0
CMS1_k127_5467600_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.076e-235 731.0
CMS1_k127_5467600_10 Rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000009625 183.0
CMS1_k127_5467600_11 Helix-hairpin-helix motif K02237 - - 0.00000000000000000000001202 102.0
CMS1_k127_5467600_2 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 1.006e-230 722.0
CMS1_k127_5467600_3 Glutathionylspermidine synthase - - - 2.226e-214 669.0
CMS1_k127_5467600_4 rod shape-determining protein mreB K03569 - - 2.664e-202 632.0
CMS1_k127_5467600_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 432.0
CMS1_k127_5467600_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007266 273.0
CMS1_k127_5467600_7 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000001034 260.0
CMS1_k127_5467600_8 - - - - 0.00000000000000000000000000000000000000000000000000000009612 198.0
CMS1_k127_5467600_9 L-threonylcarbamoyladenylate synthase - - - 0.00000000000000000000000000000000000000000000000000479 185.0
CMS1_k127_5561169_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1272.0
CMS1_k127_5561169_1 Cell division protein FtsI penicillin-binding protein K03587 - 3.4.16.4 9.17e-291 901.0
CMS1_k127_5561169_10 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000000000000000000000000000000006544 213.0
CMS1_k127_5561169_12 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000001343 187.0
CMS1_k127_5561169_13 TIGRFAM prepilin-type N-terminal cleavage methylation domain K02456 - - 0.000000000000000000000000000000000000000000009231 166.0
CMS1_k127_5561169_14 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000000000000000000000000001358 164.0
CMS1_k127_5561169_15 ribonuclease BN K07058 - - 0.00000000000000000000000000004279 117.0
CMS1_k127_5561169_17 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000002617 104.0
CMS1_k127_5561169_18 - - - - 0.000000000821 62.0
CMS1_k127_5561169_2 Glycolate oxidase subunit K00104 - 1.1.3.15 7.619e-286 880.0
CMS1_k127_5561169_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.238e-282 879.0
CMS1_k127_5561169_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 9.101e-201 629.0
CMS1_k127_5561169_5 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 571.0
CMS1_k127_5561169_6 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 379.0
CMS1_k127_5561169_7 Plasminogen-binding protein pgbA N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 332.0
CMS1_k127_5561169_8 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 305.0
CMS1_k127_5561169_9 Nudix domain K08077 - 3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000217 280.0
CMS1_k127_56089_0 General glycosylation pathway protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 304.0
CMS1_k127_56089_1 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000004413 178.0
CMS1_k127_5626903_0 Cytochrome c biogenesis protein - - - 0.0 1566.0
CMS1_k127_5626903_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 537.0
CMS1_k127_5626903_10 Psort location CytoplasmicMembrane, score - - - 0.0005817 44.0
CMS1_k127_5626903_2 leucine binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 506.0
CMS1_k127_5626903_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 503.0
CMS1_k127_5626903_4 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 375.0
CMS1_k127_5626903_5 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 314.0
CMS1_k127_5626903_6 - - - - 0.000000000000000000000000000000000000000000000000361 178.0
CMS1_k127_5626903_8 Histidine kinase K02482,K07710 - 2.7.13.3 0.00000000000000000000000000000000000000000001029 163.0
CMS1_k127_5626903_9 thioesterase K07107 - - 0.00000000000000000000000000000001569 130.0
CMS1_k127_5633393_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1131.0
CMS1_k127_5633393_1 May be involved in recombinational repair of damaged DNA K03631 - - 4.9e-220 692.0
CMS1_k127_5633393_10 AF0941-like - - - 0.000000000000000000000000000000000000004508 147.0
CMS1_k127_5633393_11 Thioredoxin K03671 - - 0.000000000000000000000000001052 115.0
CMS1_k127_5633393_12 - - - - 0.0000000000000000818 81.0
CMS1_k127_5633393_13 nuclear chromosome segregation - - - 0.0000000003782 68.0
CMS1_k127_5633393_14 methyltransferase - - - 0.0002223 43.0
CMS1_k127_5633393_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 482.0
CMS1_k127_5633393_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 387.0
CMS1_k127_5633393_4 hydrolase, TatD K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 363.0
CMS1_k127_5633393_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 342.0
CMS1_k127_5633393_6 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 339.0
CMS1_k127_5633393_7 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 291.0
CMS1_k127_5633393_8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000127 189.0
CMS1_k127_5633393_9 - - - - 0.000000000000000000000000000000000000000000000000003131 188.0
CMS1_k127_5642084_0 MMPL family K07003 - - 0.0 1065.0
CMS1_k127_5642084_1 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 593.0
CMS1_k127_5642084_2 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000002293 167.0
CMS1_k127_5721920_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 308.0
CMS1_k127_5721920_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000002158 135.0
CMS1_k127_5721920_2 TIGRFAM Diguanylate cyclase - - - 0.00003317 47.0
CMS1_k127_5726322_0 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 396.0
CMS1_k127_5728523_0 Belongs to the ClpA ClpB family K03694,K03695 - - 0.0 1477.0
CMS1_k127_5728523_1 Diguanylate cyclase phosphodiesterase - - - 6.436e-244 769.0
CMS1_k127_5728523_10 GGDEF EAL family protein - - - 0.00000000002355 75.0
CMS1_k127_5728523_2 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 434.0
CMS1_k127_5728523_3 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 419.0
CMS1_k127_5728523_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 387.0
CMS1_k127_5728523_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 377.0
CMS1_k127_5728523_6 peptidylprolyl isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 319.0
CMS1_k127_5728523_7 Protein of unknown function (DUF3373) - - - 0.0000000000000000000000000000000000000002293 167.0
CMS1_k127_5728523_8 - - - - 0.00000000000000000000000000000000000008764 145.0
CMS1_k127_5728523_9 - - - - 0.00000000000000000000000002195 109.0
CMS1_k127_5740322_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1381.0
CMS1_k127_5740322_1 Histidine kinase - - - 0.0 1205.0
CMS1_k127_5740322_10 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 326.0
CMS1_k127_5740322_11 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003592 261.0
CMS1_k127_5740322_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000002437 220.0
CMS1_k127_5740322_13 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.0000000000000000000000000000000000000000000000000000008184 194.0
CMS1_k127_5740322_14 Response regulator receiver K07814 - - 0.00000000000000000000000000000000000000000000000000005392 188.0
CMS1_k127_5740322_15 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K03776 - - 0.000000000000000000000000000000000000000000000001407 177.0
CMS1_k127_5740322_16 RDD family - - - 0.000000000000000000001314 100.0
CMS1_k127_5740322_17 oxidoreductase activity - - - 0.000000000000000000005478 108.0
CMS1_k127_5740322_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0 1025.0
CMS1_k127_5740322_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 1.127e-315 974.0
CMS1_k127_5740322_4 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 3.168e-255 793.0
CMS1_k127_5740322_5 Belongs to the GARS family K01945 - 6.3.4.13 3.739e-253 783.0
CMS1_k127_5740322_6 COG1055 Na H antiporter NhaD and related arsenite - - - 3.111e-195 618.0
CMS1_k127_5740322_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 372.0
CMS1_k127_5740322_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 357.0
CMS1_k127_5740322_9 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 331.0
CMS1_k127_5755573_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 5.679e-212 665.0
CMS1_k127_5755573_1 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 451.0
CMS1_k127_5755573_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 376.0
CMS1_k127_5755573_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000001135 128.0
CMS1_k127_5784039_0 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 374.0
CMS1_k127_5784039_1 PFAM metallophosphoesterase K07313 - 3.1.3.16 0.0000000000000000000000000003517 123.0
CMS1_k127_5784039_2 Methyltransferase domain - - - 0.00000000000000005579 93.0
CMS1_k127_5784039_3 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000002491 55.0
CMS1_k127_5788092_0 fumarate reductase, flavoprotein subunit K00244 - 1.3.5.4 0.0 1184.0
CMS1_k127_5788092_1 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1080.0
CMS1_k127_5788092_10 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000001004 223.0
CMS1_k127_5788092_11 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit - - - 0.00000000000000000000000000000000000000000000000000000000002829 219.0
CMS1_k127_5788092_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 603.0
CMS1_k127_5788092_3 Heterodisulfide reductase subunit B K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 569.0
CMS1_k127_5788092_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 464.0
CMS1_k127_5788092_5 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 458.0
CMS1_k127_5788092_6 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 410.0
CMS1_k127_5788092_7 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 344.0
CMS1_k127_5788092_8 fumarate reductase respiratory complex transmembrane subunit K00246 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 322.0
CMS1_k127_5788092_9 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000001418 244.0
CMS1_k127_5794556_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1032.0
CMS1_k127_5794556_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1026.0
CMS1_k127_5794556_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA - - - 0.00000000002096 68.0
CMS1_k127_5794556_2 pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 4.342e-255 793.0
CMS1_k127_5794556_3 Single-stranded-DNA-specific exonuclease (RecJ) K07462 - - 3.185e-248 775.0
CMS1_k127_5794556_4 PFAM Filamentation induced by cAMP - - - 1.045e-194 612.0
CMS1_k127_5794556_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 569.0
CMS1_k127_5794556_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000003999 188.0
CMS1_k127_5794556_7 WD40 repeats - - - 0.00000000000000000000000000000000001744 140.0
CMS1_k127_5794556_8 Outer membrane efflux protein - - - 0.00000000000000000000000000496 124.0
CMS1_k127_5794556_9 Bacterial regulatory proteins, tetR family K03577 - - 0.00000000000005592 73.0
CMS1_k127_5795707_0 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 9.007e-255 788.0
CMS1_k127_5795707_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 297.0
CMS1_k127_5795707_2 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000000000000000000000000000000000000001769 157.0
CMS1_k127_5795707_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000001535 91.0
CMS1_k127_5795707_4 - - - - 0.0000000005531 64.0
CMS1_k127_5803180_0 peptidase U32 family K08303 - - 4.518e-258 798.0
CMS1_k127_5803180_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 586.0
CMS1_k127_5803180_10 Protein of unknown function (DUF3972) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001218 268.0
CMS1_k127_5803180_11 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006463 277.0
CMS1_k127_5803180_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002035 250.0
CMS1_k127_5803180_13 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000000000001807 214.0
CMS1_k127_5803180_14 Sugar-transfer associated ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000369 224.0
CMS1_k127_5803180_15 peptidyl-tyrosine sulfation - - - 0.000000000000000000000844 111.0
CMS1_k127_5803180_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 575.0
CMS1_k127_5803180_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 468.0
CMS1_k127_5803180_4 Protein of unknown function DUF89 K09116 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 452.0
CMS1_k127_5803180_5 histidinol phosphate phosphatase K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 421.0
CMS1_k127_5803180_6 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 400.0
CMS1_k127_5803180_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 313.0
CMS1_k127_5803180_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 291.0
CMS1_k127_5803180_9 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004603 274.0
CMS1_k127_5803355_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0 1167.0
CMS1_k127_5803355_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 2.622e-226 706.0
CMS1_k127_5803355_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 602.0
CMS1_k127_5803355_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 512.0
CMS1_k127_5803355_4 Membrane-bound lytic murein transglycosylase C K08306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001139 245.0
CMS1_k127_5803355_5 Hit family K02503 - - 0.000000000000000000000000000000000000000000000000000000000474 203.0
CMS1_k127_5863473_0 Peptidase M48 K06013 - 3.4.24.84 1.789e-224 700.0
CMS1_k127_5863473_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 609.0
CMS1_k127_5863473_10 abc transporter atp-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 330.0
CMS1_k127_5863473_11 Belongs to the protein N5-glutamine methyltransferase family K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 323.0
CMS1_k127_5863473_12 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000001192 224.0
CMS1_k127_5863473_13 NosL - - - 0.00000000000000000000000000000000000000000000000000000000000000691 219.0
CMS1_k127_5863473_14 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000000000000000000000000000001521 211.0
CMS1_k127_5863473_15 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000008997 138.0
CMS1_k127_5863473_16 - - - - 0.0000000000000000000000005871 106.0
CMS1_k127_5863473_2 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 559.0
CMS1_k127_5863473_3 Nitrous oxidase accessory protein K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 491.0
CMS1_k127_5863473_4 Abc transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 464.0
CMS1_k127_5863473_5 NosL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 458.0
CMS1_k127_5863473_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 445.0
CMS1_k127_5863473_7 Ferredoxin-type protein, NapH MauN family K02574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 381.0
CMS1_k127_5863473_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 374.0
CMS1_k127_5863473_9 abc transporter atp-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 353.0
CMS1_k127_5869357_0 Alginate O-acetylation protein - - - 7.148e-199 623.0
CMS1_k127_5869357_1 - - - - 0.0000000000000000000000000000000000000000007642 161.0
CMS1_k127_5876685_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1229.0
CMS1_k127_5876685_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1015.0
CMS1_k127_5876685_10 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000001226 229.0
CMS1_k127_5876685_11 membrane - - - 0.0000000000000000000000000000000000000000002301 160.0
CMS1_k127_5876685_12 Diguanylate cyclase - - - 0.0000000000000000000004403 100.0
CMS1_k127_5876685_13 - - - - 0.000000009759 62.0
CMS1_k127_5876685_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 5.382e-305 943.0
CMS1_k127_5876685_3 COG4664 TRAP-type mannitol chloroaromatic compound transport system large permease component - - - 2.134e-242 754.0
CMS1_k127_5876685_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 2.237e-200 627.0
CMS1_k127_5876685_5 outer membrane porin, OprD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 535.0
CMS1_k127_5876685_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 390.0
CMS1_k127_5876685_7 dna polymerase iii K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 343.0
CMS1_k127_5876685_8 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 319.0
CMS1_k127_5876685_9 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 318.0
CMS1_k127_5882728_0 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000008891 216.0
CMS1_k127_5882728_1 phosphoserine phosphatase activity K20977 - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
CMS1_k127_5882728_2 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively - - - 0.0000000000000000000000000000000000000000000000000000001479 200.0
CMS1_k127_5882728_4 - - - - 0.000000000000000000000000000000007544 129.0
CMS1_k127_5882728_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000001096 113.0
CMS1_k127_5882974_0 mechanosensitive ion channel - - - 3.856e-254 793.0
CMS1_k127_5882974_1 MiaB-like tRNA modifying enzyme - - - 2.338e-229 714.0
CMS1_k127_5882974_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 586.0
CMS1_k127_589550_0 acid synthase K01654,K15898 - 2.5.1.56,2.5.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 443.0
CMS1_k127_589550_1 pseudaminic acid biosynthesis-associated protein PseG K15897 - 3.6.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 315.0
CMS1_k127_589550_2 Cytidylyltransferase K07257 - - 0.000000000000000000000000000000000000000002422 161.0
CMS1_k127_589550_3 Pseudaminic acid biosynthesis N-acetyl transferase K15896 - 2.3.1.202 0.0000000000000000000000000000008734 127.0
CMS1_k127_5900004_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.115e-259 800.0
CMS1_k127_5900004_1 Cysteine desulfurase K04487 - 2.8.1.7 1.635e-240 746.0
CMS1_k127_5900004_2 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 1.967e-194 608.0
CMS1_k127_5900004_3 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 345.0
CMS1_k127_5900004_4 Transcriptional Regulator AraC Family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 319.0
CMS1_k127_5900004_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 297.0
CMS1_k127_5900004_6 diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008526 286.0
CMS1_k127_5900004_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001179 242.0
CMS1_k127_5900004_8 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.000000000000000000000004666 116.0
CMS1_k127_59042_0 Oxidoreductase K06151 - 1.1.99.3 5.766e-280 868.0
CMS1_k127_59042_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 7.508e-273 842.0
CMS1_k127_59042_10 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 509.0
CMS1_k127_59042_11 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 493.0
CMS1_k127_59042_12 DNA methyltransferase K07318 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 454.0
CMS1_k127_59042_13 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 455.0
CMS1_k127_59042_14 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 398.0
CMS1_k127_59042_15 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 370.0
CMS1_k127_59042_16 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 358.0
CMS1_k127_59042_17 homoserine kinase type II (Protein kinase fold) K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 349.0
CMS1_k127_59042_18 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 341.0
CMS1_k127_59042_19 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 325.0
CMS1_k127_59042_2 RNA-binding protein homologous to eukaryotic snRNP - - - 2.942e-233 727.0
CMS1_k127_59042_20 Virulence protein RhuM family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 308.0
CMS1_k127_59042_21 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 298.0
CMS1_k127_59042_22 esterase of the alpha beta hydrolase fold K07002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000181 282.0
CMS1_k127_59042_23 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007137 276.0
CMS1_k127_59042_24 iron-sulfur transferase activity K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009658 257.0
CMS1_k127_59042_25 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002985 256.0
CMS1_k127_59042_26 COGs COG1120 ABC-type cobalamin Fe3 -siderophores transport systems ATPase components K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000003836 250.0
CMS1_k127_59042_27 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008172 254.0
CMS1_k127_59042_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003595 224.0
CMS1_k127_59042_29 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000008324 184.0
CMS1_k127_59042_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 2.337e-200 632.0
CMS1_k127_59042_30 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000000000000000002397 175.0
CMS1_k127_59042_31 7TM diverse intracellular signalling K20971 - - 0.000000000000000000000000000000000000000000001139 178.0
CMS1_k127_59042_32 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000002273 166.0
CMS1_k127_59042_33 - - - - 0.000000000000000000000000000000000000004164 147.0
CMS1_k127_59042_35 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000001196 98.0
CMS1_k127_59042_36 - - - - 0.0000000000000000007539 88.0
CMS1_k127_59042_38 AAA ATPase domain - - - 0.0000000000004297 78.0
CMS1_k127_59042_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 4.077e-197 617.0
CMS1_k127_59042_5 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 585.0
CMS1_k127_59042_6 DNA recombination protein K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 581.0
CMS1_k127_59042_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 569.0
CMS1_k127_59042_8 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 570.0
CMS1_k127_59042_9 TonB dependent receptor K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 574.0
CMS1_k127_5904461_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1658.0
CMS1_k127_5904461_1 DNA helicase K03657 - 3.6.4.12 0.0 1194.0
CMS1_k127_5904461_2 COG0659 Sulfate permease and related K03321 - - 1.835e-259 806.0
CMS1_k127_5904461_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 2.887e-199 632.0
CMS1_k127_5904461_4 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 429.0
CMS1_k127_5904461_5 Heat shock protein DnaJ domain protein - - - 0.0000000003077 70.0
CMS1_k127_596756_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001471 279.0
CMS1_k127_5974275_0 TonB-dependent copper receptor K02014 - - 1.026e-303 944.0
CMS1_k127_5974275_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.4.12 9.92e-277 855.0
CMS1_k127_5974275_10 PFAM EAL domain - - - 0.000001026 50.0
CMS1_k127_5974275_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 9.47e-208 648.0
CMS1_k127_5974275_3 Belongs to the agmatine deiminase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 537.0
CMS1_k127_5974275_4 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 499.0
CMS1_k127_5974275_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 486.0
CMS1_k127_5974275_6 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 447.0
CMS1_k127_5974275_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 341.0
CMS1_k127_5974275_8 GGDEF domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000009985 173.0
CMS1_k127_5974275_9 ribonuclease BN K07058 - - 0.000000000000000000000000000000005707 134.0
CMS1_k127_6017761_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.763e-278 857.0
CMS1_k127_6017761_1 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 597.0
CMS1_k127_6017761_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 592.0
CMS1_k127_6017761_3 Radical SAM protein K07139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 574.0
CMS1_k127_6017761_4 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 410.0
CMS1_k127_6017761_5 Protein of unknown function (DUF2393) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008045 255.0
CMS1_k127_6017761_6 SUPERFAMILY SSF53098, Polynucleotidyl transferase, Ribonuclease H fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001368 254.0
CMS1_k127_6017761_7 Protein of unknown function (DUF2393) - - - 0.0000000000000000000000000000000000000000000000000005717 188.0
CMS1_k127_6051536_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.3,1.4.1.4 3.358e-264 816.0
CMS1_k127_6051536_1 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 457.0
CMS1_k127_6051536_2 Protein conserved in bacteria K09943 - - 0.0000000000000000000001039 98.0
CMS1_k127_6113041_0 ATP-dependent CLP protease ATP-binding subunit K03694 - - 0.0 1182.0
CMS1_k127_6113041_1 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 597.0
CMS1_k127_6113041_10 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003377 249.0
CMS1_k127_6113041_11 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000001478 160.0
CMS1_k127_6113041_2 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 524.0
CMS1_k127_6113041_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 516.0
CMS1_k127_6113041_4 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 511.0
CMS1_k127_6113041_5 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 379.0
CMS1_k127_6113041_6 component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 363.0
CMS1_k127_6113041_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 322.0
CMS1_k127_6113041_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 319.0
CMS1_k127_6113041_9 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 295.0
CMS1_k127_6135235_0 Pilus assembly protein - - - 3.757e-221 696.0
CMS1_k127_6135235_1 - - - - 0.00000000000000000000000000000000000000000000000000000003205 201.0
CMS1_k127_6135235_2 C-terminal domain of metallo-carboxypeptidase - - - 0.0000000000000000000000000000000000002261 143.0
CMS1_k127_6152466_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1459.0
CMS1_k127_6152466_1 AcrB/AcrD/AcrF family - - - 0.0 1414.0
CMS1_k127_6152466_10 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 423.0
CMS1_k127_6152466_11 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007358 399.0
CMS1_k127_6152466_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 396.0
CMS1_k127_6152466_13 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 384.0
CMS1_k127_6152466_14 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 362.0
CMS1_k127_6152466_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 368.0
CMS1_k127_6152466_16 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 326.0
CMS1_k127_6152466_17 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 312.0
CMS1_k127_6152466_18 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000183 260.0
CMS1_k127_6152466_19 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
CMS1_k127_6152466_2 4Fe-4S binding domain - - - 0.0 1214.0
CMS1_k127_6152466_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005572 253.0
CMS1_k127_6152466_21 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000001332 236.0
CMS1_k127_6152466_22 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000003279 221.0
CMS1_k127_6152466_23 biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000000000004935 183.0
CMS1_k127_6152466_24 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000006579 166.0
CMS1_k127_6152466_25 Belongs to the ArsC family - - - 0.000000000000000000000000000000000000000009118 156.0
CMS1_k127_6152466_26 of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.0000000000000000000000000000000001851 133.0
CMS1_k127_6152466_3 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00366 - 1.7.7.1 3.706e-262 814.0
CMS1_k127_6152466_4 2-hydroxyglutaryl-CoA dehydratase - - - 1.317e-239 745.0
CMS1_k127_6152466_5 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 7.82e-211 673.0
CMS1_k127_6152466_6 Histidine kinase - - - 5.221e-198 623.0
CMS1_k127_6152466_7 receptor K02014 - - 8.127e-195 631.0
CMS1_k127_6152466_8 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 602.0
CMS1_k127_6152466_9 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 473.0
CMS1_k127_6186519_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 323.0
CMS1_k127_6186519_1 Transposase - - - 0.0000000000000000000000000000000423 126.0
CMS1_k127_6186519_2 Belongs to the 'phage' integrase family K14059 - - 0.000000000000000001971 89.0
CMS1_k127_6186519_3 Transposase, Mutator family - - - 0.000000001964 59.0
CMS1_k127_6186519_4 - - - - 0.0003443 44.0
CMS1_k127_6213613_0 molybdopterin biosynthesis K03750 - 2.10.1.1 8.661e-204 639.0
CMS1_k127_6213613_1 ATPase (AAA K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 568.0
CMS1_k127_6213613_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 280.0
CMS1_k127_6213613_11 molybdopterin converting factor K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004176 276.0
CMS1_k127_6213613_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000001834 230.0
CMS1_k127_6213613_13 neuron death in response to oxidative stress K01173 - - 0.00000000000000000000000000000000000000000000000000000000000000000875 231.0
CMS1_k127_6213613_14 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000002126 198.0
CMS1_k127_6213613_15 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000006413 193.0
CMS1_k127_6213613_16 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000004132 184.0
CMS1_k127_6213613_17 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000000000001914 173.0
CMS1_k127_6213613_18 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000001944 153.0
CMS1_k127_6213613_19 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000000000000000006092 151.0
CMS1_k127_6213613_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 533.0
CMS1_k127_6213613_20 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000002917 128.0
CMS1_k127_6213613_21 molybdopterin converting factor K03636 - - 0.00000000000000000000000000000007501 126.0
CMS1_k127_6213613_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K16076,K18093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 475.0
CMS1_k127_6213613_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009548 416.0
CMS1_k127_6213613_5 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 366.0
CMS1_k127_6213613_6 ribosomal protein L3 K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 355.0
CMS1_k127_6213613_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 338.0
CMS1_k127_6213613_8 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 338.0
CMS1_k127_6213613_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 302.0
CMS1_k127_6216229_0 N-6 DNA Methylase K03427 - 2.1.1.72 2.604e-294 919.0
CMS1_k127_6216229_1 DNA specificity K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 384.0
CMS1_k127_6216229_2 Pfam:DUF955 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 311.0
CMS1_k127_6216229_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000003258 127.0
CMS1_k127_6216229_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000001217 63.0
CMS1_k127_6216229_5 Plasmid maintenance system killer protein K07334 - - 0.0000004411 55.0
CMS1_k127_6218996_0 Bacteriophage replication gene A protein (GPA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 378.0
CMS1_k127_6218996_1 - - - - 0.0003443 44.0
CMS1_k127_6224922_0 Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 564.0
CMS1_k127_6224922_1 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 391.0
CMS1_k127_6224922_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 384.0
CMS1_k127_6224922_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 325.0
CMS1_k127_6224922_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 302.0
CMS1_k127_6224922_5 - - - - 0.00000000000000000000000000000000000000000000000000000008432 196.0
CMS1_k127_6224922_6 - - - - 0.000000000000000000000000000000000000002971 149.0
CMS1_k127_6224922_7 YceI-like domain - - - 0.0000000000000000000000111 103.0
CMS1_k127_6233577_0 acetolactate synthase K01652 - 2.2.1.6 0.0 1054.0
CMS1_k127_6233577_1 acetolactate synthase K01653 - 2.2.1.6 0.0000000000001812 70.0
CMS1_k127_6235363_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 5.499e-253 784.0
CMS1_k127_6235363_1 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000003825 221.0
CMS1_k127_6235363_2 - - - - 0.0000000000000000000000000009858 114.0
CMS1_k127_6235363_3 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000008945 75.0
CMS1_k127_625225_0 COG2067 Long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 466.0
CMS1_k127_625225_1 COG2067 Long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 418.0
CMS1_k127_6280045_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 454.0
CMS1_k127_6280045_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000004365 214.0
CMS1_k127_6280045_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000001888 69.0
CMS1_k127_642369_0 DNA polymerase K02337 - 2.7.7.7 0.0 2068.0
CMS1_k127_642369_1 M18 family aminopeptidase K01267 - 3.4.11.21 7.509e-234 727.0
CMS1_k127_642369_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 6.683e-229 711.0
CMS1_k127_642369_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 615.0
CMS1_k127_642369_4 Histidine kinase K02482,K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 371.0
CMS1_k127_642369_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 365.0
CMS1_k127_642369_6 protein-glutamate methylesterase activity K03413 - - 0.00000000000000000000000000000000000000003119 155.0
CMS1_k127_642369_7 - - - - 0.0000000000002631 74.0
CMS1_k127_650085_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0 1101.0
CMS1_k127_65078_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1251.0
CMS1_k127_65078_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 2.718e-233 724.0
CMS1_k127_65078_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 572.0
CMS1_k127_65078_3 Fumarate hydratase K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 535.0
CMS1_k127_65078_4 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 522.0
CMS1_k127_65078_5 Fumarate K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 372.0
CMS1_k127_65078_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 316.0
CMS1_k127_65078_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000879 109.0
CMS1_k127_764166_0 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 306.0
CMS1_k127_764166_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005795 235.0
CMS1_k127_764166_2 Uncharacterised protein family (UPF0153) K06940 - - 0.0000000000000000000000000000000000000000000000000000006865 194.0
CMS1_k127_769399_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 466.0
CMS1_k127_835414_0 Belongs to the 'phage' integrase family K14059 - - 0.0000000000000000000000000000000000000000000000000000000000003408 226.0
CMS1_k127_835414_1 Helix-turn-helix - - - 0.0000000000000005846 79.0
CMS1_k127_881291_0 protein conserved in bacteria K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 319.0
CMS1_k127_881291_1 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000004994 169.0
CMS1_k127_881291_2 PAAR repeat-containing protein - - - 0.00000000000000004913 95.0
CMS1_k127_891860_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.356e-267 825.0
CMS1_k127_891860_1 Involved in the TonB-independent uptake of proteins K03641 - - 2.703e-195 616.0
CMS1_k127_891860_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 353.0
CMS1_k127_891860_3 peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 299.0
CMS1_k127_891860_4 MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 287.0
CMS1_k127_891860_5 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000001085 219.0
CMS1_k127_891860_6 transport protein K03559 - - 0.0000000000000000000000000000000000000000000000000000000000001245 214.0
CMS1_k127_891860_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000001421 208.0
CMS1_k127_891860_8 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000002601 159.0
CMS1_k127_891860_9 TonB C terminal K03832 - - 0.00000000000000000000000001753 117.0
CMS1_k127_974849_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1360.0
CMS1_k127_974849_1 ATP citrate synthase K15230 - 2.3.3.8 0.0 1073.0
CMS1_k127_974849_10 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 558.0
CMS1_k127_974849_11 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 497.0
CMS1_k127_974849_12 DNA polymerase III K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 493.0
CMS1_k127_974849_13 Co-chaperone-curved DNA binding protein A K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 488.0
CMS1_k127_974849_14 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034,K12370 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 456.0
CMS1_k127_974849_15 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 416.0
CMS1_k127_974849_16 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 390.0
CMS1_k127_974849_17 Anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 342.0
CMS1_k127_974849_18 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 343.0
CMS1_k127_974849_19 COG0847 DNA polymerase III epsilon subunit and related 3'-5' K02342,K10857 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 319.0
CMS1_k127_974849_2 Ribonuclease K12573 - - 0.0 1016.0
CMS1_k127_974849_20 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 297.0
CMS1_k127_974849_21 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 284.0
CMS1_k127_974849_22 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007714 281.0
CMS1_k127_974849_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001548 229.0
CMS1_k127_974849_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000438 222.0
CMS1_k127_974849_25 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001087 250.0
CMS1_k127_974849_26 Transcriptional regulator K13640 - - 0.00000000000000000000000000000000000000000000000000000000000004054 215.0
CMS1_k127_974849_27 - - - - 0.000000000000000000000000000000000000000000000001883 175.0
CMS1_k127_974849_28 Rod binding protein - - - 0.00000000000000000000000000000000000000000000001124 172.0
CMS1_k127_974849_29 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000009007 164.0
CMS1_k127_974849_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.299e-316 970.0
CMS1_k127_974849_30 - - - - 0.000000000000000000000000000000000000000005371 157.0
CMS1_k127_974849_31 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000008275 154.0
CMS1_k127_974849_32 general secretion pathway protein - - - 0.00000000000000000000000000000001312 130.0
CMS1_k127_974849_33 Diguanylate cyclase phosphodiesterase - - - 0.0000000000000000000000000000001593 128.0
CMS1_k127_974849_34 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000001934 138.0
CMS1_k127_974849_35 response regulator, receiver - - - 0.00000000000000000000000000006754 133.0
CMS1_k127_974849_36 Anti-sigma-28 factor, FlgM - - - 0.0000000000000000004848 88.0
CMS1_k127_974849_4 flagellar hook-associated protein K02396 - - 2.659e-265 829.0
CMS1_k127_974849_5 ATP citrate lyase citrate-binding - - - 4.014e-259 801.0
CMS1_k127_974849_6 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.898e-225 703.0
CMS1_k127_974849_7 HDOD domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 606.0
CMS1_k127_974849_8 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 564.0
CMS1_k127_974849_9 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 533.0
CMS1_k127_987297_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0 1102.0
CMS1_k127_987297_1 argininosuccinate lyase K01755 - 4.3.2.1 9.699e-271 836.0
CMS1_k127_987297_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 7.504e-248 769.0
CMS1_k127_987297_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 6.884e-243 754.0
CMS1_k127_987297_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 548.0
CMS1_k127_987297_5 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 343.0
CMS1_k127_987297_6 Membrane-bound lytic murein transglycosylase C K08306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003058 273.0
CMS1_k127_987297_7 redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005386 248.0
CMS1_k127_987297_8 FxsA cytoplasmic membrane protein K01649,K07113 - 2.3.3.13 0.00000000000000000000000000000000000000000000001343 174.0
CMS1_k127_987297_9 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000005092 111.0
CMS1_k127_996308_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 584.0
CMS1_k127_996308_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 340.0
CMS1_k127_996308_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 317.0
CMS1_k127_996308_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003406 298.0
CMS1_k127_996308_4 Histidine kinase - - - 0.0000000001381 62.0