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Overview

ID MAG00392
Name CMS1_bin.87
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobacteria
Order Desulfobacterales
Family UBA11574
Genus UBA11574
Species
Assembly information
Completeness (%) 65.79
Contamination (%) 2.32
GC content (%) 45.0
N50 (bp) 5,221
Genome size (bp) 1,576,523

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1559

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1000296_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 1.27e-224 706.0
CMS1_k127_1000296_1 Thermophilic metalloprotease (M29) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 549.0
CMS1_k127_1000296_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 430.0
CMS1_k127_1000296_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 381.0
CMS1_k127_1000296_4 regulatory protein, FmdB family - - - 0.000000000000000000000000003364 111.0
CMS1_k127_1000296_5 - - - - 0.00000000000000000000000002057 110.0
CMS1_k127_101822_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 291.0
CMS1_k127_101822_1 Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000005431 182.0
CMS1_k127_1028603_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 613.0
CMS1_k127_1028603_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000002361 228.0
CMS1_k127_1028603_2 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000002104 200.0
CMS1_k127_1028603_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000001358 189.0
CMS1_k127_1036083_0 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 451.0
CMS1_k127_1036083_1 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 416.0
CMS1_k127_1036083_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006949 263.0
CMS1_k127_1036083_3 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005749 248.0
CMS1_k127_1036083_4 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003986 246.0
CMS1_k127_1036083_5 FmdE, Molybdenum formylmethanofuran dehydrogenase operon - - - 0.00000000000000000000000000000000000005784 149.0
CMS1_k127_1036083_6 - - - - 0.00000000000000000000000368 102.0
CMS1_k127_1099_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 528.0
CMS1_k127_1099_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000219 138.0
CMS1_k127_110422_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1897.0
CMS1_k127_110422_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 392.0
CMS1_k127_110422_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 302.0
CMS1_k127_110422_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002114 237.0
CMS1_k127_110422_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001246 229.0
CMS1_k127_110422_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000163 197.0
CMS1_k127_110422_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000002814 196.0
CMS1_k127_110422_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000001401 91.0
CMS1_k127_110422_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000002348 95.0
CMS1_k127_1120650_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 609.0
CMS1_k127_1120650_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 409.0
CMS1_k127_1139953_0 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 517.0
CMS1_k127_1139953_1 type II secretion system protein E K02454 - - 0.0000000000000000000000007482 111.0
CMS1_k127_1143526_0 PFAM CoA-binding domain protein K09181 - - 5.815e-299 938.0
CMS1_k127_1143526_1 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002828 248.0
CMS1_k127_1151153_0 Receptor family ligand binding region K01999 - - 6.578e-218 682.0
CMS1_k127_1151153_1 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 9.554e-196 617.0
CMS1_k127_1151153_2 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 523.0
CMS1_k127_1151153_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 496.0
CMS1_k127_1151153_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 359.0
CMS1_k127_1151153_5 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000002686 117.0
CMS1_k127_1156942_0 ABC-type uncharacterized transport system - - - 4.141e-252 798.0
CMS1_k127_1156942_1 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 387.0
CMS1_k127_1156942_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 340.0
CMS1_k127_1156942_3 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000001487 185.0
CMS1_k127_1156942_4 TIGRFAM periplasmic serine protease, Do DeqQ family K04771 - 3.4.21.107 0.000000000001633 72.0
CMS1_k127_115939_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 6.047e-245 766.0
CMS1_k127_115939_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 309.0
CMS1_k127_1159910_0 General secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 402.0
CMS1_k127_1159910_1 Fimbrial assembly family protein K02461 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 397.0
CMS1_k127_1159910_2 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004458 256.0
CMS1_k127_1159910_3 General secretion pathway protein C K02452 - - 0.0000000000000000000000000000000000000000000000000000000000000000001461 239.0
CMS1_k127_1159910_4 Prokaryotic N-terminal methylation motif K02459 - - 0.00000000000000000000000000000000000000000000000000000000006433 211.0
CMS1_k127_1159910_5 Type II secretion system (T2SS), protein M K02462 - - 0.000000000000000000000000000000000000000000000003843 177.0
CMS1_k127_1159910_6 - - - - 0.0000000000000000000002549 107.0
CMS1_k127_1169882_0 CHASE2 K01768 - 4.6.1.1 1.214e-215 689.0
CMS1_k127_1169882_1 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001142 250.0
CMS1_k127_1173924_0 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 436.0
CMS1_k127_1173924_1 PFAM phosphoesterase RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 427.0
CMS1_k127_1173924_2 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 362.0
CMS1_k127_1173924_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 356.0
CMS1_k127_1173924_4 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 294.0
CMS1_k127_1173924_5 Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000374 203.0
CMS1_k127_1173924_6 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000000000000000000000001419 113.0
CMS1_k127_1173924_7 PFAM ATP synthase I chain - - - 0.00000000000000000000000005046 113.0
CMS1_k127_1173924_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0005102 43.0
CMS1_k127_1180222_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 520.0
CMS1_k127_1180222_1 PFAM Cold-shock K03704 - - 0.00000000000000000000000035 105.0
CMS1_k127_1180222_2 Cytochrome c, class I K02275,K05301,K08738 - 1.8.2.1,1.9.3.1 0.000000000000000001114 89.0
CMS1_k127_1242471_0 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006839 571.0
CMS1_k127_1242471_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 469.0
CMS1_k127_1242471_2 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 349.0
CMS1_k127_1242471_3 PFAM Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005227 284.0
CMS1_k127_1242471_4 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000000000000000000000000000001103 214.0
CMS1_k127_1242471_5 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000001383 163.0
CMS1_k127_1242471_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000006708 126.0
CMS1_k127_125299_0 ABC1 family K03688 - - 1.137e-231 730.0
CMS1_k127_125299_1 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000001483 228.0
CMS1_k127_125299_2 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.000000000000000000000000000001717 121.0
CMS1_k127_125299_3 FixH - - - 0.00000000003562 71.0
CMS1_k127_125299_4 NlpC/P60 family - - - 0.00006935 45.0
CMS1_k127_1259786_0 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 407.0
CMS1_k127_1259786_1 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 340.0
CMS1_k127_1259786_2 COG0451 Nucleoside-diphosphate-sugar K01784 - 5.1.3.2 0.000000000000000000000000000000000000000003002 169.0
CMS1_k127_126463_0 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 334.0
CMS1_k127_126463_1 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 301.0
CMS1_k127_126463_2 - - - - 0.000000000000000000000000000000000000000000000000000001303 194.0
CMS1_k127_1305853_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.752e-309 977.0
CMS1_k127_1305853_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 587.0
CMS1_k127_1305853_2 cysteine synthase A K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 405.0
CMS1_k127_1305853_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 409.0
CMS1_k127_1305853_4 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008489 274.0
CMS1_k127_1305853_5 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000000000000000000736 192.0
CMS1_k127_1305853_6 COGs COG1150 Heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000206 151.0
CMS1_k127_1305853_7 PFAM response regulator receiver - - - 0.0000000000000000000009853 101.0
CMS1_k127_1316833_0 BadF BadG BcrA BcrD - - - 0.0 1109.0
CMS1_k127_1316833_1 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 283.0
CMS1_k127_1316833_2 - - - - 0.0000000000000000000000000000000000006883 144.0
CMS1_k127_1316833_3 translation initiation factor activity - - - 0.00000000002273 66.0
CMS1_k127_1333161_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.351e-309 959.0
CMS1_k127_1333161_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 442.0
CMS1_k127_1333161_2 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008397 392.0
CMS1_k127_1333161_3 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 345.0
CMS1_k127_1333161_4 Transcription termination factor nusG K05785 - - 0.000000000000000000000000000000000000000000000000000000000000000000001257 241.0
CMS1_k127_1333161_5 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000000000000000000003646 161.0
CMS1_k127_1333161_6 Penicillin-binding Protein - - - 0.0000009923 55.0
CMS1_k127_1378651_0 Conserved region in glutamate synthase - - - 1.818e-315 970.0
CMS1_k127_1378651_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.104e-226 707.0
CMS1_k127_1378651_2 chain release factor K15034 - - 0.000000000000000000000000000000002354 131.0
CMS1_k127_1378651_3 pyruvate phosphate dikinase - - - 0.000000000000000000000004061 102.0
CMS1_k127_138457_0 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 1.43e-322 1001.0
CMS1_k127_138457_1 PFAM PfkB K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001046 273.0
CMS1_k127_138457_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000005326 218.0
CMS1_k127_138457_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000003898 154.0
CMS1_k127_1389399_0 PKS_PP_betabranch - - - 0.0 1659.0
CMS1_k127_1406794_0 Major Facilitator Superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 544.0
CMS1_k127_1406794_1 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 388.0
CMS1_k127_1406794_2 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001165 284.0
CMS1_k127_1406794_3 PFAM Lipocalin family protein K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000009617 228.0
CMS1_k127_1406794_4 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
CMS1_k127_1406794_5 Protein of unknown function (DUF3124) - - - 0.00000000000000000000000000000000000000000000000000001591 194.0
CMS1_k127_1406794_6 - - - - 0.0000000000000000000000000000000000000000000000000007844 186.0
CMS1_k127_1406794_7 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000000000879 178.0
CMS1_k127_1406794_8 Acetyltransferase (GNAT) family - - - 0.000000001482 61.0
CMS1_k127_1406794_9 Rubrerythrin - - - 0.0005401 43.0
CMS1_k127_1464569_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 569.0
CMS1_k127_1464569_1 - - - - 0.00000000000000000000000000000359 132.0
CMS1_k127_1464569_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0005521 52.0
CMS1_k127_1513974_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 488.0
CMS1_k127_1513974_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 357.0
CMS1_k127_1513974_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 353.0
CMS1_k127_1513974_3 TIGRFAM TraB family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 347.0
CMS1_k127_1513974_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000003306 151.0
CMS1_k127_1514429_0 pyridine nucleotide-disulphide oxidoreductase dimerisation - - - 3.928e-212 672.0
CMS1_k127_1514429_1 - - - - 0.0000000000001503 75.0
CMS1_k127_1517057_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 502.0
CMS1_k127_1517057_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 325.0
CMS1_k127_1517057_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001674 260.0
CMS1_k127_1517057_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000007383 216.0
CMS1_k127_1517057_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000009163 142.0
CMS1_k127_1517057_5 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000005825 134.0
CMS1_k127_1538264_0 PFAM Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 566.0
CMS1_k127_1538264_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 516.0
CMS1_k127_1538264_2 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 400.0
CMS1_k127_1538264_3 Menaquinone biosynthesis K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 368.0
CMS1_k127_1538264_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 354.0
CMS1_k127_1538264_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 310.0
CMS1_k127_1538264_6 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002223 254.0
CMS1_k127_1538264_7 DoxX - - - 0.00000000000000000000000000000000000000000003489 166.0
CMS1_k127_1538264_8 - - - - 0.0000000000000000000000000000005738 123.0
CMS1_k127_1538264_9 Phosphorylase superfamily K01239,K01243 - 3.2.2.1,3.2.2.9 0.0000000000001325 79.0
CMS1_k127_154259_0 Protein of unknown function (DUF401) K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 400.0
CMS1_k127_154259_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000002564 190.0
CMS1_k127_154259_2 Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000004489 54.0
CMS1_k127_1543746_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 587.0
CMS1_k127_1543746_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009267 553.0
CMS1_k127_1543746_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 534.0
CMS1_k127_1543746_3 CheY-like receiver, AAA-type ATPase, and DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 514.0
CMS1_k127_1543746_4 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008306 330.0
CMS1_k127_1543746_5 shikimate 3-dehydrogenase (NADP+) activity K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 289.0
CMS1_k127_154963_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1191.0
CMS1_k127_154963_1 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000008417 208.0
CMS1_k127_154963_2 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000002102 170.0
CMS1_k127_154963_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000002403 55.0
CMS1_k127_157122_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 550.0
CMS1_k127_157122_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 381.0
CMS1_k127_157122_2 PFAM Cold-shock K03704 - - 0.0000000000000000000000000000000000181 135.0
CMS1_k127_1638265_0 type II secretion system protein E K02454 - - 1.146e-240 758.0
CMS1_k127_1638265_1 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 512.0
CMS1_k127_1638265_2 Haemolytic - - - 0.000000000000000002792 87.0
CMS1_k127_1652986_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 437.0
CMS1_k127_1652986_1 ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000000000004689 197.0
CMS1_k127_1714259_0 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 497.0
CMS1_k127_1714259_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000001836 244.0
CMS1_k127_1714259_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000006771 164.0
CMS1_k127_1714259_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00000000000000000000008948 102.0
CMS1_k127_1714259_4 MoaE protein K03635 - 2.8.1.12 0.000000001435 59.0
CMS1_k127_1715285_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1092.0
CMS1_k127_1715285_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 436.0
CMS1_k127_1715285_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000007405 132.0
CMS1_k127_17339_0 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 555.0
CMS1_k127_17339_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000006742 174.0
CMS1_k127_1775190_0 Aminotransferase class I and II K00814 - 2.6.1.2 1.228e-207 652.0
CMS1_k127_1775190_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 560.0
CMS1_k127_1775190_2 Glycine-zipper domain - - - 0.00001608 50.0
CMS1_k127_1805887_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 473.0
CMS1_k127_1805887_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 311.0
CMS1_k127_1805887_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000001269 241.0
CMS1_k127_1805887_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003021 209.0
CMS1_k127_1805887_4 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000000118 128.0
CMS1_k127_1805887_5 Belongs to the SfsA family K06206 - - 0.00001734 49.0
CMS1_k127_1806542_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 563.0
CMS1_k127_1806542_1 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000472 283.0
CMS1_k127_1806542_2 Histidine kinase - - - 0.00000000000000000000000000000000000000003452 160.0
CMS1_k127_1808076_0 Cache domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 597.0
CMS1_k127_1808076_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000004076 174.0
CMS1_k127_1808076_2 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000006961 127.0
CMS1_k127_1812527_0 Heat shock 70 kDa protein K04043 - - 0.0 1052.0
CMS1_k127_1812527_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.005e-321 992.0
CMS1_k127_1812527_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 447.0
CMS1_k127_1812527_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000005908 182.0
CMS1_k127_1812527_4 - - - - 0.000000000000000009299 84.0
CMS1_k127_1812527_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000003662 60.0
CMS1_k127_1812565_0 Sodium:sulfate symporter transmembrane region - - - 2.987e-277 860.0
CMS1_k127_1812565_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 6.613e-240 752.0
CMS1_k127_1812565_2 CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 419.0
CMS1_k127_1812565_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000452 248.0
CMS1_k127_1812565_4 - - - - 0.000000003018 58.0
CMS1_k127_1814675_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 333.0
CMS1_k127_1814675_3 bacterial-type flagellum-dependent cell motility K16147 - 2.4.99.16 0.00000000000000000000000000000000000000000000000000003087 206.0
CMS1_k127_1814675_4 - - - - 0.00000000000001531 74.0
CMS1_k127_1815435_0 YXWGXW repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 395.0
CMS1_k127_1815435_1 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 308.0
CMS1_k127_1815435_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000001222 96.0
CMS1_k127_1819426_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1152.0
CMS1_k127_1819426_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00002662 48.0
CMS1_k127_1829860_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 6.384e-239 764.0
CMS1_k127_1829860_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000001269 181.0
CMS1_k127_1829860_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000128 132.0
CMS1_k127_1829860_3 - - - - 0.00000000000000000003041 93.0
CMS1_k127_1837981_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1032.0
CMS1_k127_1837981_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1028.0
CMS1_k127_1837981_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000001781 226.0
CMS1_k127_1837981_11 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000003724 183.0
CMS1_k127_1837981_12 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000001732 180.0
CMS1_k127_1837981_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000007706 157.0
CMS1_k127_1837981_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000001362 151.0
CMS1_k127_1837981_15 Regulatory protein - - - 0.000000000000000000000000000000000000002597 149.0
CMS1_k127_1837981_16 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000000000000006263 141.0
CMS1_k127_1837981_17 PFAM CMP dCMP deaminase zinc-binding K11991 - 3.5.4.33 0.000000000000000000000000000000000005545 138.0
CMS1_k127_1837981_18 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000001092 111.0
CMS1_k127_1837981_19 Sucrose phosphorylase K05341 - 2.4.1.4 0.0000002088 55.0
CMS1_k127_1837981_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 8.668e-270 852.0
CMS1_k127_1837981_3 Participates in both transcription termination and antitermination K02600 - - 2.596e-204 645.0
CMS1_k127_1837981_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 549.0
CMS1_k127_1837981_5 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 472.0
CMS1_k127_1837981_6 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 387.0
CMS1_k127_1837981_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 345.0
CMS1_k127_1837981_8 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 338.0
CMS1_k127_1837981_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001245 256.0
CMS1_k127_1866236_0 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 595.0
CMS1_k127_1867440_0 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 411.0
CMS1_k127_1871307_0 AIR synthase related protein, N-terminal domain K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 543.0
CMS1_k127_1871307_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002525 256.0
CMS1_k127_1871307_2 - - - - 0.000000000000000000000000000000000000000000000000331 182.0
CMS1_k127_1871307_3 Transcriptional regulator - - - 0.00000000000000000000007317 107.0
CMS1_k127_187944_0 Peptidase M16C associated K06972 - - 0.0 1262.0
CMS1_k127_187944_1 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007577 278.0
CMS1_k127_187944_2 Orotidine 5'-phosphate decarboxylase / HUMPS family K13831 - 4.1.2.43,5.3.1.27 0.00000000000000000000000000000000000000000007719 162.0
CMS1_k127_187944_3 COGs COG0794 sugar phosphate isomerase involved in capsule formation K08094 - 5.3.1.27 0.000000000000000000000000000000000000000000203 165.0
CMS1_k127_187944_4 - - - - 0.000000000000000000000000003475 116.0
CMS1_k127_1882876_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 443.0
CMS1_k127_1882876_1 epimerase dehydratase K07071 - - 0.00000000000000000000000000000000000000000000000004974 182.0
CMS1_k127_1882876_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00001476 48.0
CMS1_k127_1883956_0 Receptor family ligand binding region K01999 - - 4.708e-211 661.0
CMS1_k127_1883956_1 DNA polymerase III, delta' K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 473.0
CMS1_k127_1883956_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 348.0
CMS1_k127_1883956_3 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000009473 229.0
CMS1_k127_1883956_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000001211 231.0
CMS1_k127_1883956_5 - - - - 0.000000000007962 67.0
CMS1_k127_1884905_0 PFAM glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 424.0
CMS1_k127_1884905_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 400.0
CMS1_k127_1884905_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 365.0
CMS1_k127_1884905_3 L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000002665 216.0
CMS1_k127_1884905_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000217 175.0
CMS1_k127_1884905_5 belongs to the aldehyde dehydrogenase family K00128,K00131,K00135,K00140 - 1.2.1.16,1.2.1.18,1.2.1.20,1.2.1.27,1.2.1.3,1.2.1.79,1.2.1.9 0.0000000000000000000000000000000007527 145.0
CMS1_k127_1886385_0 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 554.0
CMS1_k127_1886385_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000144 200.0
CMS1_k127_1886385_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000007575 110.0
CMS1_k127_1887917_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 293.0
CMS1_k127_1887917_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 - - 0.0000000000000000000000000001414 115.0
CMS1_k127_1887917_2 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.0000000000002763 70.0
CMS1_k127_1899162_0 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000002491 248.0
CMS1_k127_1899162_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000005871 212.0
CMS1_k127_1905894_0 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000404 215.0
CMS1_k127_1914839_0 GXGXG motif - - - 0.0 1214.0
CMS1_k127_1914839_1 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 528.0
CMS1_k127_1914839_2 Conserved region in glutamate synthase - - - 0.00000000000000002212 81.0
CMS1_k127_1916293_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 420.0
CMS1_k127_1923680_0 Phosphoenolpyruvate carboxykinase N-terminal domain K01596 - 4.1.1.32 2.472e-305 945.0
CMS1_k127_1923680_1 Major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 602.0
CMS1_k127_1923680_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001779 265.0
CMS1_k127_1962503_0 glycosyl transferase group 1 K00695 - 2.4.1.13 5.654e-291 911.0
CMS1_k127_1991324_0 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000009815 240.0
CMS1_k127_1991324_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000006066 213.0
CMS1_k127_1991324_2 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000007653 118.0
CMS1_k127_1994215_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0 1804.0
CMS1_k127_1994215_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 1.59e-296 926.0
CMS1_k127_1994215_2 PFAM Polysulphide reductase, NrfD K00185 - - 1.171e-226 707.0
CMS1_k127_1994215_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.021e-197 623.0
CMS1_k127_1994215_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 606.0
CMS1_k127_1994215_5 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 501.0
CMS1_k127_1994215_6 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007901 471.0
CMS1_k127_1994215_7 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 329.0
CMS1_k127_1994215_8 - - - - 0.0000000000000000008705 86.0
CMS1_k127_2004156_0 Seven times multi-haem cytochrome CxxCH - - - 1.804e-200 636.0
CMS1_k127_2004156_1 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 412.0
CMS1_k127_2004156_2 - K07112 - - 0.00000000000000000000000000000000000000000000006165 174.0
CMS1_k127_2004156_3 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000003612 131.0
CMS1_k127_2004156_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K07112 - - 0.0000000000002336 75.0
CMS1_k127_2004156_5 Protein conserved in bacteria - - - 0.0002547 45.0
CMS1_k127_2019347_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 7.938e-228 719.0
CMS1_k127_2019347_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 372.0
CMS1_k127_2019347_2 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000102 215.0
CMS1_k127_2019347_3 - - - - 0.00000000000003794 74.0
CMS1_k127_2019347_4 OsmC-like protein - - - 0.000000000031 66.0
CMS1_k127_2029124_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.418e-217 681.0
CMS1_k127_2029124_1 Protein of unknown function (DUF2959) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004868 281.0
CMS1_k127_2029124_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 279.0
CMS1_k127_2029124_3 Universal stress protein family - - - 0.000000000000000000000000000000000007169 143.0
CMS1_k127_2029124_4 AAA-like domain - - - 0.00000000000000000000000001539 113.0
CMS1_k127_2029124_5 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000001938 64.0
CMS1_k127_2029449_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 6.109e-216 678.0
CMS1_k127_2029449_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 7.216e-214 668.0
CMS1_k127_2029449_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 415.0
CMS1_k127_2040495_0 PFAM Acyl-CoA dehydrogenase - - - 4.941e-202 633.0
CMS1_k127_2040495_1 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 455.0
CMS1_k127_2040495_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 410.0
CMS1_k127_2040495_3 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 394.0
CMS1_k127_2040495_4 L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 329.0
CMS1_k127_2040495_5 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 285.0
CMS1_k127_2040495_6 granule-associated protein - - - 0.000000000000004136 79.0
CMS1_k127_2040495_7 AMIN domain - - - 0.00000000002953 72.0
CMS1_k127_2040495_8 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.00000001101 64.0
CMS1_k127_2040495_9 Domain of unknown function (DUF4440) - - - 0.0004634 50.0
CMS1_k127_2046874_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 466.0
CMS1_k127_2046874_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002122 242.0
CMS1_k127_2046874_2 Membrane domain of glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000003051 103.0
CMS1_k127_2046874_3 AIR synthase related protein, N-terminal domain - - - 0.00000000000002372 74.0
CMS1_k127_2106778_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 5.086e-229 715.0
CMS1_k127_2106778_1 Universal stress protein family - - - 0.0000000000000000000000000000000000000003682 153.0
CMS1_k127_2106778_2 - - - - 0.00000000000000000000000001899 109.0
CMS1_k127_2106778_3 50S ribosome-binding GTPase - - - 0.00000000000000004916 96.0
CMS1_k127_2111647_0 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000006906 191.0
CMS1_k127_2125588_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.719e-195 628.0
CMS1_k127_2125588_1 AMMECR1 K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 354.0
CMS1_k127_2128385_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1031.0
CMS1_k127_2128385_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 2.713e-235 744.0
CMS1_k127_2131337_0 polymerase with PALM domain, HD hydrolase domain and Zn ribbon K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 338.0
CMS1_k127_2131337_1 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000003404 80.0
CMS1_k127_214086_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009213 437.0
CMS1_k127_214086_1 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 292.0
CMS1_k127_214086_2 TIGRFAM maf protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 258.0
CMS1_k127_2141039_0 4Fe-4S dicluster domain - - - 3.539e-313 971.0
CMS1_k127_2141039_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.174e-266 830.0
CMS1_k127_2141039_2 Major Facilitator Superfamily K02445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 561.0
CMS1_k127_2141039_3 Electron transfer flavoprotein K03521 - - 0.0000000000000000009777 87.0
CMS1_k127_214122_0 PRC-barrel domain - - - 0.0000000000000001867 83.0
CMS1_k127_2145418_0 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 315.0
CMS1_k127_2145418_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000001474 100.0
CMS1_k127_2145418_3 response regulator - - - 0.0001938 48.0
CMS1_k127_216886_0 General secretory system II protein E domain protein - - - 2.277e-312 973.0
CMS1_k127_2171511_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1288.0
CMS1_k127_2171511_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 341.0
CMS1_k127_2172327_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 558.0
CMS1_k127_2172327_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 529.0
CMS1_k127_2172327_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000127 282.0
CMS1_k127_2172327_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004203 250.0
CMS1_k127_2172327_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000001048 229.0
CMS1_k127_2172327_5 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000001246 188.0
CMS1_k127_2172327_6 energy transducer activity K03646,K03832 - - 0.00000000000000000000000000000000000000001124 164.0
CMS1_k127_2176645_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 600.0
CMS1_k127_2176645_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 468.0
CMS1_k127_2176645_2 transcriptional regulator, AsnC family - - - 0.000000000000000000000000000000000000000000000000000000000000002306 222.0
CMS1_k127_2176645_4 cation diffusion facilitator family transporter - - - 0.0000000000002427 71.0
CMS1_k127_2176645_5 - - - - 0.00000002354 57.0
CMS1_k127_2198917_0 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 368.0
CMS1_k127_2198917_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 339.0
CMS1_k127_2198917_2 PFAM thioesterase superfamily K02614 - - 0.00000000000000000000000000000000000000000000000002548 182.0
CMS1_k127_2198917_3 Acyl-CoA synthetase (NDP forming) K09181 - - 0.00000000000000000000000000000000000000000000001069 182.0
CMS1_k127_2224580_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000001555 249.0
CMS1_k127_2224580_1 PFAM methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000001118 147.0
CMS1_k127_2224580_2 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000003805 119.0
CMS1_k127_2224580_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000001529 50.0
CMS1_k127_2239113_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 598.0
CMS1_k127_2239113_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 537.0
CMS1_k127_2239113_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 402.0
CMS1_k127_2239113_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 346.0
CMS1_k127_2239113_4 Belongs to the TtcA family K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 332.0
CMS1_k127_2239113_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 305.0
CMS1_k127_2239113_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000002173 234.0
CMS1_k127_2239113_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000004074 100.0
CMS1_k127_2239113_8 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000001344 63.0
CMS1_k127_224111_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 3.093e-256 811.0
CMS1_k127_224111_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.143e-209 656.0
CMS1_k127_224111_10 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000158 198.0
CMS1_k127_224111_11 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000002649 179.0
CMS1_k127_224111_12 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000009742 181.0
CMS1_k127_224111_13 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000002232 102.0
CMS1_k127_224111_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 4.275e-194 614.0
CMS1_k127_224111_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 501.0
CMS1_k127_224111_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 321.0
CMS1_k127_224111_5 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000478 289.0
CMS1_k127_224111_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001248 261.0
CMS1_k127_224111_7 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000008811 255.0
CMS1_k127_224111_8 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000002404 249.0
CMS1_k127_224111_9 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000009192 228.0
CMS1_k127_2258430_0 PFAM Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.0 1019.0
CMS1_k127_2258430_1 ABC transporter transmembrane region K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 340.0
CMS1_k127_2259719_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 0.0 1044.0
CMS1_k127_2259719_1 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 501.0
CMS1_k127_2259719_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 395.0
CMS1_k127_2259719_3 formate dehydrogenase (NAD+) activity K00123,K00336 - 1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 287.0
CMS1_k127_2259719_4 PFAM nucleoside H symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000001201 235.0
CMS1_k127_2259719_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000006449 188.0
CMS1_k127_2259719_6 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.0000000000000000000000000000000003593 136.0
CMS1_k127_2357229_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K00187 - 1.2.7.1,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 473.0
CMS1_k127_2357229_1 PFAM Peptidoglycan-binding domain 1 protein K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 477.0
CMS1_k127_23857_0 May be involved in recombinational repair of damaged DNA K03631 - - 5.415e-198 632.0
CMS1_k127_23857_1 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003774 267.0
CMS1_k127_23857_2 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000001105 190.0
CMS1_k127_2403552_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.489e-260 811.0
CMS1_k127_2403552_1 pfam abc-1 K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 551.0
CMS1_k127_2414563_0 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 359.0
CMS1_k127_2414563_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000004551 175.0
CMS1_k127_2414563_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000002104 166.0
CMS1_k127_24159_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 1.858e-236 755.0
CMS1_k127_24159_1 Domain of Unknown Function (DUF748) - - - 4.969e-201 650.0
CMS1_k127_24159_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000007981 136.0
CMS1_k127_24159_3 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000003263 119.0
CMS1_k127_244002_0 Elongation factor Tu domain 2 K02355 - - 0.0 1069.0
CMS1_k127_244002_1 radical SAM domain protein K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 537.0
CMS1_k127_244002_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000274 270.0
CMS1_k127_244002_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000002647 219.0
CMS1_k127_244002_4 Major Facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000002225 182.0
CMS1_k127_244002_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000007364 180.0
CMS1_k127_244002_6 Peptidase M50 - - - 0.0000000000000002757 87.0
CMS1_k127_2446131_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000006045 246.0
CMS1_k127_2446131_1 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000005998 201.0
CMS1_k127_2446131_2 sulfur carrier activity - GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000126 54.0
CMS1_k127_2523558_0 Fe-S cluster domain protein - - - 0.0 1015.0
CMS1_k127_2523558_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 4.129e-279 872.0
CMS1_k127_2523558_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000003123 76.0
CMS1_k127_2523558_2 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 501.0
CMS1_k127_2523558_3 4Fe-4S dicluster domain K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 457.0
CMS1_k127_2523558_4 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 317.0
CMS1_k127_2523558_5 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 291.0
CMS1_k127_2523558_6 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007887 254.0
CMS1_k127_2523558_7 - - - - 0.000000000000000000000000000000000000000000000000002339 187.0
CMS1_k127_2523558_8 Class III cytochrome C family - - - 0.0000000000000000000000000000000000003153 145.0
CMS1_k127_2523558_9 - - - - 0.00000000000000000000000000000000003169 136.0
CMS1_k127_2535552_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 2.9e-279 867.0
CMS1_k127_2535552_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 369.0
CMS1_k127_2535552_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000002402 133.0
CMS1_k127_2544594_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1051.0
CMS1_k127_2544594_1 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 565.0
CMS1_k127_2544594_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
CMS1_k127_2544594_3 - - - - 0.00000000000000000000000000000008933 126.0
CMS1_k127_268807_0 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 616.0
CMS1_k127_268807_1 Response regulator receiver K07713 - - 0.0000000000007216 68.0
CMS1_k127_2713142_0 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 496.0
CMS1_k127_2713142_1 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 410.0
CMS1_k127_2713142_2 Protein of unknown function (DUF721) - - - 0.00000000000000000000000003571 110.0
CMS1_k127_2714922_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 7.775e-298 923.0
CMS1_k127_2714922_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 485.0
CMS1_k127_2714922_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 366.0
CMS1_k127_2714922_3 Proto-chlorophyllide reductase 57 kD subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 336.0
CMS1_k127_2714922_4 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000002267 150.0
CMS1_k127_2716277_0 Sodium:sulfate symporter transmembrane region K14445 - - 9.643e-240 748.0
CMS1_k127_2716277_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 503.0
CMS1_k127_2716277_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000004754 213.0
CMS1_k127_2716277_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000001735 200.0
CMS1_k127_2716277_4 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000003742 184.0
CMS1_k127_2716277_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000008774 87.0
CMS1_k127_2716277_6 cheY-homologous receiver domain - - - 0.000000001952 66.0
CMS1_k127_2718001_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 385.0
CMS1_k127_2718001_1 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005626 250.0
CMS1_k127_2718926_0 Seven times multi-haem cytochrome CxxCH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 485.0
CMS1_k127_2728096_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 5.334e-220 687.0
CMS1_k127_2728128_0 Flavodoxin - - - 1.072e-207 650.0
CMS1_k127_2728128_1 Rhomboid family K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 462.0
CMS1_k127_2728128_2 IMP dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000127 234.0
CMS1_k127_2728128_3 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002248 230.0
CMS1_k127_2728128_4 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000001226 174.0
CMS1_k127_2728128_5 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.0000000000000000000000000000000002693 131.0
CMS1_k127_2728128_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000001391 125.0
CMS1_k127_2728128_7 rubredoxin - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0017144,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114,GO:0072592 - 0.00000000000000000000000007166 107.0
CMS1_k127_2728128_8 4Fe-4S single cluster domain K05337 - - 0.000000000000000001995 86.0
CMS1_k127_2730355_0 TIGRFAM ammonium transporter K03320 - - 5.277e-209 656.0
CMS1_k127_2731050_0 PFAM Peptidase S24 - - - 0.00000000000000000000000000000000000000000000000000000000005268 210.0
CMS1_k127_2731050_1 Uncharacterised protein family UPF0066 - - - 0.000000007438 57.0
CMS1_k127_2734137_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 5.077e-215 675.0
CMS1_k127_2734137_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 396.0
CMS1_k127_2734137_2 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 368.0
CMS1_k127_2734137_3 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 332.0
CMS1_k127_2734137_4 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 288.0
CMS1_k127_2734137_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000001188 248.0
CMS1_k127_2734137_6 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004281 239.0
CMS1_k127_2734137_7 Phospholipase_D-nuclease N-terminal - - - 0.0000000000000001089 81.0
CMS1_k127_2734137_8 manually curated - - - 0.00000000000008267 75.0
CMS1_k127_2734137_9 Restriction endonuclease K07448 - - 0.00000000004536 63.0
CMS1_k127_2737991_0 Protein of unknown function DUF89 - - - 0.0000000000000000000000000000000000000000005575 161.0
CMS1_k127_2737991_1 Cupin domain - - - 0.000000000000000000000000000000000000002072 150.0
CMS1_k127_2747432_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000001362 214.0
CMS1_k127_2747432_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000006215 160.0
CMS1_k127_2747432_2 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000001941 106.0
CMS1_k127_2747432_3 - - - - 0.0000000000008078 72.0
CMS1_k127_2747432_4 PFAM Type IV pilus assembly PilZ - - - 0.00000009913 58.0
CMS1_k127_2759267_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 524.0
CMS1_k127_2759267_1 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 485.0
CMS1_k127_2759267_2 ATPase with chaperone activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 479.0
CMS1_k127_2759267_3 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 413.0
CMS1_k127_2759267_4 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 388.0
CMS1_k127_2759267_5 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 373.0
CMS1_k127_2759267_6 Protein of unknown function (DUF3313) - - - 0.00000000000000000000000000000000000000000000000000000000000008262 222.0
CMS1_k127_2759267_7 - - - - 0.0000000000000000000000000000000000000000001029 169.0
CMS1_k127_2759267_8 Cysteine rich repeat - - - 0.0000000000000000000000000000000000000000004675 161.0
CMS1_k127_2768515_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 511.0
CMS1_k127_2768515_1 TIGRFAM prepilin-type N-terminal cleavage methylation domain - - - 0.0000007004 55.0
CMS1_k127_2768515_2 - - - - 0.00001289 53.0
CMS1_k127_2770493_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000102 243.0
CMS1_k127_2770493_1 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000005632 237.0
CMS1_k127_2770493_2 Yip1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 230.0
CMS1_k127_2770493_3 Major Facilitator Superfamily - - - 0.000000000000008507 76.0
CMS1_k127_2783858_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000004596 186.0
CMS1_k127_2783858_1 - - - - 0.000000000000000000000000000003598 125.0
CMS1_k127_2783858_2 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.0000000005194 69.0
CMS1_k127_2796400_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 497.0
CMS1_k127_2796400_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000003715 224.0
CMS1_k127_2796400_2 TIGRFAM hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000001433 151.0
CMS1_k127_2796400_3 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000000004856 145.0
CMS1_k127_2815453_0 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 321.0
CMS1_k127_2815453_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002497 257.0
CMS1_k127_2815453_2 phosphoenolpyruvate carboxykinase (GTP) activity K01596,K01610 - 4.1.1.32,4.1.1.49 0.000000000000002635 77.0
CMS1_k127_2820357_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.444e-205 652.0
CMS1_k127_2820357_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 468.0
CMS1_k127_2820357_2 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 289.0
CMS1_k127_2820357_3 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001321 271.0
CMS1_k127_2820357_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000004427 108.0
CMS1_k127_2820357_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000005133 107.0
CMS1_k127_2820357_6 - - - - 0.0000000000000000006343 87.0
CMS1_k127_2820357_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003085 70.0
CMS1_k127_2821228_0 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000002984 170.0
CMS1_k127_2821228_1 PFAM VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000006167 166.0
CMS1_k127_2821228_2 Helix-turn-helix - - - 0.00000000000002002 74.0
CMS1_k127_2822337_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 8.085e-216 676.0
CMS1_k127_2822337_1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 270.0
CMS1_k127_2822337_2 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005561 252.0
CMS1_k127_2823499_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000004091 229.0
CMS1_k127_2823499_1 phosphorelay signal transduction system K07712 - - 0.0000000000000000000000000000000000000000003214 176.0
CMS1_k127_2823499_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000004388 115.0
CMS1_k127_2823499_3 signal transduction histidine kinase - - - 0.00000000000003908 86.0
CMS1_k127_2837631_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 2.033e-202 641.0
CMS1_k127_2837631_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 537.0
CMS1_k127_2837631_10 OstA-like protein K09774 - - 0.00000000000000000000000000000000000007929 149.0
CMS1_k127_2837631_11 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000004637 125.0
CMS1_k127_2837631_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 391.0
CMS1_k127_2837631_3 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 364.0
CMS1_k127_2837631_4 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 361.0
CMS1_k127_2837631_5 Belongs to the 'phage' integrase family K14059 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 328.0
CMS1_k127_2837631_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 234.0
CMS1_k127_2837631_7 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000000000000000000001502 224.0
CMS1_k127_2837631_8 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000001393 190.0
CMS1_k127_2837631_9 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000000000000000212 172.0
CMS1_k127_2863819_0 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 441.0
CMS1_k127_2863819_1 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 367.0
CMS1_k127_2863819_2 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 281.0
CMS1_k127_2863819_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000002399 265.0
CMS1_k127_2863819_4 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000003713 140.0
CMS1_k127_2869552_0 - - - - 0.00000000000000000000672 94.0
CMS1_k127_2870505_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000264 263.0
CMS1_k127_2870505_1 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000007899 169.0
CMS1_k127_2872416_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.152e-225 703.0
CMS1_k127_2872416_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 4.221e-202 643.0
CMS1_k127_2872416_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 558.0
CMS1_k127_2872416_3 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000002494 175.0
CMS1_k127_2873194_0 PFAM DisA bacterial checkpoint controller nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 607.0
CMS1_k127_2873194_1 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 527.0
CMS1_k127_2873194_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 375.0
CMS1_k127_2899066_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 570.0
CMS1_k127_2899066_1 PFAM Acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.0000000000000000000000005878 104.0
CMS1_k127_2899066_2 Cytidylate kinase-like family - - - 0.000000000000008341 74.0
CMS1_k127_2903651_0 type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 576.0
CMS1_k127_2903651_1 CBS domain K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 437.0
CMS1_k127_2935118_0 response regulator receiver K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 608.0
CMS1_k127_2935118_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000008893 242.0
CMS1_k127_2935118_2 PFAM conserved K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000003825 221.0
CMS1_k127_2935118_3 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000002196 123.0
CMS1_k127_2957460_0 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006042 254.0
CMS1_k127_2957460_1 Domain of unknown function (DUF4826) - - - 0.000000000000000000000000000000000000000000000000009834 184.0
CMS1_k127_2957460_2 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000003363 98.0
CMS1_k127_2957460_3 Thioesterase superfamily - - - 0.00000000000000000000009411 98.0
CMS1_k127_2957460_4 - - - - 0.0000000000000000000009421 101.0
CMS1_k127_2957460_5 alcohol dehydrogenase - - - 0.0000001901 54.0
CMS1_k127_2957460_6 Transposase K03652 - 3.2.2.21 0.000001691 51.0
CMS1_k127_2963896_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 527.0
CMS1_k127_2963896_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 339.0
CMS1_k127_2963896_2 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000004636 193.0
CMS1_k127_2963896_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000716 136.0
CMS1_k127_2973460_0 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 597.0
CMS1_k127_2973460_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008132 270.0
CMS1_k127_2981228_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 455.0
CMS1_k127_2981228_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 364.0
CMS1_k127_2981228_2 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 358.0
CMS1_k127_2988799_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 299.0
CMS1_k127_2988799_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000007249 166.0
CMS1_k127_2988799_2 - - - - 0.0000000000000000000000000001687 121.0
CMS1_k127_2988799_3 - - - - 0.00002824 51.0
CMS1_k127_2991498_0 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000001917 220.0
CMS1_k127_2991498_1 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000000000000000005402 169.0
CMS1_k127_2991498_2 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000003594 166.0
CMS1_k127_3002541_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 450.0
CMS1_k127_3002541_1 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 363.0
CMS1_k127_3002541_2 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001475 246.0
CMS1_k127_3002541_3 FAD dependent oxidoreductase - - - 0.000000000000000000000007836 102.0
CMS1_k127_3013199_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 392.0
CMS1_k127_3013199_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000007481 188.0
CMS1_k127_3013199_2 S-layer homology domain - - - 0.00000000000000000006223 93.0
CMS1_k127_301411_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 618.0
CMS1_k127_301411_1 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 275.0
CMS1_k127_301411_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000001271 228.0
CMS1_k127_305919_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 2.059e-309 973.0
CMS1_k127_305919_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000898 186.0
CMS1_k127_3082171_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 299.0
CMS1_k127_3082171_1 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008106 241.0
CMS1_k127_3082171_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000006869 129.0
CMS1_k127_3095369_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1011.0
CMS1_k127_3095369_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 459.0
CMS1_k127_3095369_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 430.0
CMS1_k127_3102117_0 2-Nitropropane dioxygenase - - - 1.77e-221 702.0
CMS1_k127_3102117_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000002356 127.0
CMS1_k127_3142064_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1324.0
CMS1_k127_3142064_1 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1083.0
CMS1_k127_3142064_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 320.0
CMS1_k127_3142064_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000732 151.0
CMS1_k127_3142064_4 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000008713 138.0
CMS1_k127_31849_0 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 330.0
CMS1_k127_31849_1 Putative exonuclease, RdgC - - - 0.0000000000000000000000000000000000000000000000000000000000000000001777 235.0
CMS1_k127_31849_2 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000000007988 234.0
CMS1_k127_31849_3 May be involved in recombination - - - 0.000000000000000000000000000000000000000000000000000000003719 203.0
CMS1_k127_31849_4 Putative zinc- or iron-chelating domain K06940 - - 0.000007146 49.0
CMS1_k127_3209780_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 1.486e-279 866.0
CMS1_k127_3209780_1 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006254 272.0
CMS1_k127_3237731_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 404.0
CMS1_k127_3237731_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 404.0
CMS1_k127_3237731_10 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000009559 82.0
CMS1_k127_3237731_2 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 385.0
CMS1_k127_3237731_3 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 357.0
CMS1_k127_3237731_4 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001765 270.0
CMS1_k127_3237731_5 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000004621 233.0
CMS1_k127_3237731_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000008806 154.0
CMS1_k127_3237731_7 cyclic nucleotide binding K01420,K10716,K10914 - - 0.0000000000000000000000000000000000000001944 157.0
CMS1_k127_3237731_8 Histidine kinase-like ATPases - - - 0.00000000000000000000000000002314 121.0
CMS1_k127_3237731_9 Pfam:Pyridox_oxidase - - - 0.00000000000000000006546 95.0
CMS1_k127_3302989_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 3.719e-211 666.0
CMS1_k127_3302989_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 450.0
CMS1_k127_3302989_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 428.0
CMS1_k127_3302989_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000002652 228.0
CMS1_k127_3302989_4 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000001285 179.0
CMS1_k127_3302989_5 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000003481 141.0
CMS1_k127_3302989_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000003941 108.0
CMS1_k127_3324174_0 helix_turn_helix, Lux Regulon K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 315.0
CMS1_k127_3324174_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004212 282.0
CMS1_k127_3324174_2 CHASE - - - 0.0000000000003844 82.0
CMS1_k127_3324174_3 - - - - 0.00007796 47.0
CMS1_k127_3384772_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009426 489.0
CMS1_k127_3384772_1 PilZ domain - - - 0.0000000000000000000006581 100.0
CMS1_k127_3394775_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 8.082e-302 938.0
CMS1_k127_3394775_1 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 560.0
CMS1_k127_3394775_2 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 329.0
CMS1_k127_3394775_3 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000012 287.0
CMS1_k127_3410094_0 PFAM ferredoxin - - - 1.738e-311 964.0
CMS1_k127_3410094_1 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 460.0
CMS1_k127_3410094_2 PFAM peptidase S45 penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 427.0
CMS1_k127_3410094_3 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 316.0
CMS1_k127_3410094_4 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
CMS1_k127_3410094_5 cyclic nucleotide binding K10914,K12132,K21564 - 2.7.11.1 0.000000000000000000000000000000000000000000002731 168.0
CMS1_k127_3410094_6 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000002772 112.0
CMS1_k127_3410094_7 carboxylic ester hydrolase activity K03928 - 3.1.1.1 0.0000000000000002287 91.0
CMS1_k127_3420832_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.155e-204 651.0
CMS1_k127_3420832_1 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 435.0
CMS1_k127_3420832_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 291.0
CMS1_k127_3438238_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 498.0
CMS1_k127_3438238_1 PFAM Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 448.0
CMS1_k127_3438238_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000001472 190.0
CMS1_k127_3488549_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.643e-209 664.0
CMS1_k127_3488549_1 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 507.0
CMS1_k127_3488549_2 Methyltransferase small domain K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000000000003772 209.0
CMS1_k127_3488549_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000009399 158.0
CMS1_k127_35233_0 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 516.0
CMS1_k127_35233_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 336.0
CMS1_k127_35233_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001804 261.0
CMS1_k127_3565007_0 PFAM type II secretion system protein E K02669 - - 7.266e-196 614.0
CMS1_k127_3565007_1 PFAM type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 597.0
CMS1_k127_3565007_2 DivIVA protein K04074 - - 0.00000000000000000000000000000000000000000000000000000000001468 210.0
CMS1_k127_3565007_3 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000001804 190.0
CMS1_k127_3565007_4 YGGT family K02221 - - 0.0000000000000000000000000000000000000008171 149.0
CMS1_k127_3565007_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000006094 130.0
CMS1_k127_35689_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1500.0
CMS1_k127_35689_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 462.0
CMS1_k127_35689_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000001137 154.0
CMS1_k127_3584208_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 357.0
CMS1_k127_3584208_1 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000051 180.0
CMS1_k127_3584208_2 response to cobalt ion - - - 0.00000000000000000000000000000000000005298 143.0
CMS1_k127_3595394_0 PFAM aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 577.0
CMS1_k127_3595394_1 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 344.0
CMS1_k127_3595394_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000007379 232.0
CMS1_k127_3595394_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000001866 97.0
CMS1_k127_3597622_0 Subunit ChlI of Mg-chelatase K01338 - 3.4.21.53 2.017e-262 825.0
CMS1_k127_3597622_1 - - - - 0.0000000000001105 75.0
CMS1_k127_3600768_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 605.0
CMS1_k127_3603116_0 aconitate hydratase K01681 - 4.2.1.3 1e-323 1001.0
CMS1_k127_3603116_1 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000000000000000000000000000000000000000000000007831 190.0
CMS1_k127_3603116_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000006991 87.0
CMS1_k127_3603424_0 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 441.0
CMS1_k127_3603424_1 TrkA-C domain - - - 0.00000000000000000000000000000000000000005672 152.0
CMS1_k127_3603424_2 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000009942 136.0
CMS1_k127_3603424_3 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000002232 118.0
CMS1_k127_3604128_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1102.0
CMS1_k127_3604128_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000001546 216.0
CMS1_k127_3612615_0 ABC-Type Dipeptide Transport System Periplasmic Component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 577.0
CMS1_k127_3612615_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.000000000000000000000000000002417 125.0
CMS1_k127_3612615_2 nitrogen compound transport K02033,K13894 - - 0.0000000000000000000000001425 108.0
CMS1_k127_3614127_0 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 473.0
CMS1_k127_3614127_1 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000001931 83.0
CMS1_k127_3614996_0 PFAM sodium sulfate symporter - - - 1.63e-270 839.0
CMS1_k127_3614996_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 1.872e-232 731.0
CMS1_k127_3614996_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 587.0
CMS1_k127_3614996_3 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000009219 236.0
CMS1_k127_3614996_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000829 146.0
CMS1_k127_3627959_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 342.0
CMS1_k127_3627959_1 Cytidylate kinase-like family - - - 0.00000000000000000000000000000001393 134.0
CMS1_k127_3627970_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000004114 224.0
CMS1_k127_3627970_1 - - - - 0.000000001963 66.0
CMS1_k127_3629244_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 524.0
CMS1_k127_3629244_1 PFAM peptidase K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 405.0
CMS1_k127_3629244_2 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 320.0
CMS1_k127_3629244_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 300.0
CMS1_k127_3629244_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004714 246.0
CMS1_k127_3630443_0 PFAM Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 598.0
CMS1_k127_3630443_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000089 68.0
CMS1_k127_3635594_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 432.0
CMS1_k127_3635594_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 312.0
CMS1_k127_3635594_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000009438 223.0
CMS1_k127_3643621_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 5.611e-301 938.0
CMS1_k127_3643621_1 Von Willebrand factor type A K02448 - - 2.059e-285 904.0
CMS1_k127_3643621_10 SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000002367 197.0
CMS1_k127_3643621_11 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000002749 184.0
CMS1_k127_3643621_12 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000002374 175.0
CMS1_k127_3643621_13 FeoA K04758 - - 0.00000000000000000000000000008275 116.0
CMS1_k127_3643621_14 Transcriptional regulator - - - 0.00000000000000000000000003902 110.0
CMS1_k127_3643621_2 response regulator receiver K02481 - - 6.533e-218 683.0
CMS1_k127_3643621_3 SMART Elongator protein 3 MiaB NifB - - - 4.248e-215 683.0
CMS1_k127_3643621_4 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 438.0
CMS1_k127_3643621_5 Radical SAM superfamily K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 430.0
CMS1_k127_3643621_6 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 361.0
CMS1_k127_3643621_7 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006039 270.0
CMS1_k127_3643621_8 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003257 272.0
CMS1_k127_3643621_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000294 248.0
CMS1_k127_3646491_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 577.0
CMS1_k127_3646491_1 COG0470 ATPase involved in DNA replication - - - 0.000000000000000000000000000000000000000000000001996 199.0
CMS1_k127_3646491_2 - - - - 0.00000000000000000000001114 104.0
CMS1_k127_3647934_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 7.099e-219 682.0
CMS1_k127_3647934_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000001134 80.0
CMS1_k127_3649366_0 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 321.0
CMS1_k127_3649366_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006868 268.0
CMS1_k127_3649366_2 PFAM Desulfoferrodoxin ferrous iron-binding region K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000004526 214.0
CMS1_k127_3649366_3 Flavodoxin domain - - - 0.00000000000000000000000000000000000000000000000000000001325 204.0
CMS1_k127_3649366_4 AhpC/TSA family - - - 0.0000000000000000000000000000002002 124.0
CMS1_k127_3649366_5 - - - - 0.000000000000000000000000008187 109.0
CMS1_k127_3649366_6 - - - - 0.00000000000000000000008567 99.0
CMS1_k127_3649366_7 Rubrerythrin K19824 - - 0.000000000000000000009597 92.0
CMS1_k127_3651376_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2305.0
CMS1_k127_3651376_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 321.0
CMS1_k127_3651376_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001165 247.0
CMS1_k127_3651376_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001481 239.0
CMS1_k127_3651376_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000001303 77.0
CMS1_k127_3655232_0 Ammonium Transporter Family K03320 - - 6.817e-222 694.0
CMS1_k127_3655232_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.219e-195 612.0
CMS1_k127_3655232_2 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000003705 197.0
CMS1_k127_3655232_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000001777 140.0
CMS1_k127_3660928_0 AMP-binding enzyme C-terminal domain - - - 5.025e-261 810.0
CMS1_k127_3660928_1 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000001944 219.0
CMS1_k127_3688104_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 402.0
CMS1_k127_3696435_0 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 5.986e-214 676.0
CMS1_k127_3696435_1 AMP binding - - - 0.00000000000000000000000000000000000495 142.0
CMS1_k127_3696435_2 Enoyl-CoA hydratase/isomerase - - - 0.0000001391 55.0
CMS1_k127_3697117_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 8.504e-247 766.0
CMS1_k127_3697117_1 FAD binding domain K07137 - - 2.657e-229 719.0
CMS1_k127_3697117_10 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001253 222.0
CMS1_k127_3697117_11 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001335 217.0
CMS1_k127_3697117_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003574 210.0
CMS1_k127_3697117_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000124 202.0
CMS1_k127_3697117_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000002272 186.0
CMS1_k127_3697117_15 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000001518 191.0
CMS1_k127_3697117_16 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000001844 169.0
CMS1_k127_3697117_17 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000003893 178.0
CMS1_k127_3697117_18 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000000000003077 139.0
CMS1_k127_3697117_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001389 104.0
CMS1_k127_3697117_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 541.0
CMS1_k127_3697117_20 Ribosomal protein L30p/L7e K02907 - - 0.000000000000000000003839 93.0
CMS1_k127_3697117_21 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000001712 70.0
CMS1_k127_3697117_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 353.0
CMS1_k127_3697117_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 304.0
CMS1_k127_3697117_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004838 275.0
CMS1_k127_3697117_6 ThiF family K03148 - 2.7.7.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000008743 267.0
CMS1_k127_3697117_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001894 259.0
CMS1_k127_3697117_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000008326 249.0
CMS1_k127_3697117_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001954 233.0
CMS1_k127_3710219_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 7.891e-230 720.0
CMS1_k127_3710219_1 hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 463.0
CMS1_k127_3710219_2 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 365.0
CMS1_k127_3710219_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000005128 170.0
CMS1_k127_3710219_4 Hydrogenase expression formation protein K03605 GO:0003674,GO:0003824,GO:0004175,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000002539 155.0
CMS1_k127_3710219_5 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 0.00000000000000000000000000000008604 124.0
CMS1_k127_3710219_6 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.0000000000000000000036 96.0
CMS1_k127_371630_0 PFAM Cytochrome c, bacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 506.0
CMS1_k127_371630_1 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 353.0
CMS1_k127_371630_2 - - - - 0.00000000000000000000000000000000000000005041 153.0
CMS1_k127_371630_3 - - - - 0.000000000000000000000000000000000006214 138.0
CMS1_k127_371630_4 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000005321 125.0
CMS1_k127_371630_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000001574 123.0
CMS1_k127_371630_6 - - - - 0.000000002365 59.0
CMS1_k127_3745919_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 492.0
CMS1_k127_3745919_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 364.0
CMS1_k127_3745919_10 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000001664 80.0
CMS1_k127_3745919_11 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000003142 79.0
CMS1_k127_3745919_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 297.0
CMS1_k127_3745919_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 297.0
CMS1_k127_3745919_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003753 230.0
CMS1_k127_3745919_5 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000009552 198.0
CMS1_k127_3745919_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000163 197.0
CMS1_k127_3745919_7 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000004178 179.0
CMS1_k127_3745919_8 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000002028 171.0
CMS1_k127_3745919_9 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000004715 141.0
CMS1_k127_3751710_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 432.0
CMS1_k127_3751710_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 324.0
CMS1_k127_3751710_10 - - - - 0.000000000000006149 79.0
CMS1_k127_3751710_11 - - - - 0.0001461 47.0
CMS1_k127_3751710_2 PFAM Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005306 270.0
CMS1_k127_3751710_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000003335 228.0
CMS1_k127_3751710_4 Prokaryotic glutathione synthetase, ATP-grasp domain K05844 - - 0.000000000000000000000000000000000000000000000000000000000000001323 226.0
CMS1_k127_3751710_5 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000003165 227.0
CMS1_k127_3751710_6 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000002712 213.0
CMS1_k127_3751710_7 Domain of unknown function (DUF1992) - - - 0.00000000000000000000000000000000000000000000008119 171.0
CMS1_k127_3751710_8 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000001272 169.0
CMS1_k127_3751710_9 - - - - 0.000000000000000000000000000000000000000021 157.0
CMS1_k127_3755458_0 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 459.0
CMS1_k127_3755458_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 336.0
CMS1_k127_3755458_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001151 238.0
CMS1_k127_3759446_0 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 485.0
CMS1_k127_3759446_1 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 427.0
CMS1_k127_3759446_2 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 408.0
CMS1_k127_3759446_3 Purine nucleoside phosphorylase involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 373.0
CMS1_k127_3759446_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007595 275.0
CMS1_k127_3759446_5 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000003698 252.0
CMS1_k127_3759446_6 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000003483 241.0
CMS1_k127_3759446_7 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000002115 237.0
CMS1_k127_3776273_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 4.672e-239 754.0
CMS1_k127_3776273_1 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005822 429.0
CMS1_k127_3776273_2 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 294.0
CMS1_k127_3776273_3 Peptidase dimerisation domain K01295 - 3.4.17.11 0.0000000000000000000000000000000000002654 145.0
CMS1_k127_3776273_4 MlaD protein - - - 0.000000000000000000000000000000004169 136.0
CMS1_k127_3776273_5 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000002026 112.0
CMS1_k127_3786192_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001008 271.0
CMS1_k127_3786192_1 Sporulation initiation inhibitor protein Soj K03496 - - 0.00000000000000000000000000004406 120.0
CMS1_k127_3786192_2 response regulator, receiver K12132 - 2.7.11.1 0.00000000000000003491 87.0
CMS1_k127_3802651_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1451.0
CMS1_k127_3802651_1 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 287.0
CMS1_k127_3802651_2 Phosphohistidine phosphatase SixA K08296 - - 0.00000000000000000000000000000000000000000000000000000002725 200.0
CMS1_k127_3802651_3 - - - - 0.00000000000000000000000000000000000000000001063 165.0
CMS1_k127_3802651_4 PFAM Rubrerythrin - - - 0.00000000000001992 75.0
CMS1_k127_3802651_5 - - - - 0.000000000002959 75.0
CMS1_k127_3802651_6 - - - - 0.000009641 54.0
CMS1_k127_3822728_0 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 294.0
CMS1_k127_3822728_1 Putative molybdenum carrier - - - 0.0000000000000000000000000000000000000000000000000000000000000929 222.0
CMS1_k127_3822728_2 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000007015 151.0
CMS1_k127_3822728_3 PFAM Protein-tyrosine phosphatase, low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.0000000000000000000000000001685 120.0
CMS1_k127_3823577_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 602.0
CMS1_k127_3866873_0 TIGRFAM threonine synthase K01733 - 4.2.3.1 4.653e-258 803.0
CMS1_k127_3866873_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.449e-202 638.0
CMS1_k127_3866873_2 PFAM TrkA-N domain K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 445.0
CMS1_k127_3866873_3 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 456.0
CMS1_k127_3866873_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 341.0
CMS1_k127_3866873_5 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002254 274.0
CMS1_k127_3866873_6 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000121 258.0
CMS1_k127_3866873_7 Tetratricopeptide TPR_2 - - - 0.0000000000000006732 80.0
CMS1_k127_3879797_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.37e-321 992.0
CMS1_k127_3879797_1 PFAM Radical SAM domain protein K07139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 442.0
CMS1_k127_3879797_10 - - - - 0.00000000000005355 79.0
CMS1_k127_3879797_2 heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 422.0
CMS1_k127_3879797_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 312.0
CMS1_k127_3879797_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000009151 225.0
CMS1_k127_3879797_5 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000000000000000000000000000000000154 210.0
CMS1_k127_3879797_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000009653 156.0
CMS1_k127_3879797_7 Belongs to the 'phage' integrase family - - - 0.00000000000000000002849 91.0
CMS1_k127_3879797_8 Prophage CP4-57 regulatory protein (AlpA) - - - 0.0000000000000000009777 87.0
CMS1_k127_3879797_9 Redoxin - - - 0.0000000000000001782 81.0
CMS1_k127_3887989_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1067.0
CMS1_k127_3887989_1 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 568.0
CMS1_k127_3887989_2 RimK-like ATP-grasp domain K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 367.0
CMS1_k127_3887989_3 PFAM ApbE family K09740 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 292.0
CMS1_k127_3887989_4 HIT domain K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000006334 257.0
CMS1_k127_3887989_5 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000000000003744 140.0
CMS1_k127_3887989_6 - - - - 0.00000000000001809 76.0
CMS1_k127_3887989_7 - - - - 0.000000000001542 72.0
CMS1_k127_3894747_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 550.0
CMS1_k127_3894747_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 284.0
CMS1_k127_3894747_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000005653 239.0
CMS1_k127_3894747_3 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000000008935 154.0
CMS1_k127_3894747_4 4Fe-4S binding domain - - - 0.00000000002354 65.0
CMS1_k127_3902392_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 404.0
CMS1_k127_3902392_1 PFAM RimK domain protein ATP-grasp K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 320.0
CMS1_k127_3902392_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000002342 101.0
CMS1_k127_3908180_0 Glycosyl transferase, family 2 K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 516.0
CMS1_k127_3908180_1 peptidase dimerisation domain - - - 0.000001044 56.0
CMS1_k127_3930908_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 557.0
CMS1_k127_3946952_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.142e-292 937.0
CMS1_k127_3946952_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 7.953e-199 631.0
CMS1_k127_3946952_2 PFAM Alpha amylase, catalytic K00690,K05341 - 2.4.1.4,2.4.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 594.0
CMS1_k127_3946952_3 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 574.0
CMS1_k127_3946952_4 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 302.0
CMS1_k127_3946952_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001835 247.0
CMS1_k127_3946952_6 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000005095 192.0
CMS1_k127_3946952_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000008063 155.0
CMS1_k127_3946952_8 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000002903 133.0
CMS1_k127_3946952_9 PFAM GHMP kinase K07031 - 2.7.1.168 0.00000000007109 64.0
CMS1_k127_3970909_0 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 0.0 1019.0
CMS1_k127_3970909_1 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000007025 168.0
CMS1_k127_3970909_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000003487 142.0
CMS1_k127_3970909_3 glycosyl transferase group 1 K00695 - 2.4.1.13 0.0000000000000000000000001038 108.0
CMS1_k127_39846_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 7.676e-203 640.0
CMS1_k127_39846_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.643e-202 639.0
CMS1_k127_39846_2 Predicted membrane protein (DUF2232) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 364.0
CMS1_k127_39846_3 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000006544 213.0
CMS1_k127_39846_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000004375 133.0
CMS1_k127_3986789_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 380.0
CMS1_k127_3986789_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 319.0
CMS1_k127_3986789_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000024 260.0
CMS1_k127_3986789_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000005979 238.0
CMS1_k127_4034876_0 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 4.042e-306 953.0
CMS1_k127_4034876_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 1.827e-260 811.0
CMS1_k127_4034876_10 - - - - 0.00000000000004125 76.0
CMS1_k127_4034876_2 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 485.0
CMS1_k127_4034876_3 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 398.0
CMS1_k127_4034876_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000003468 240.0
CMS1_k127_4034876_5 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000002488 196.0
CMS1_k127_4034876_6 - - - - 0.000000000000000000000000000000000000005608 150.0
CMS1_k127_4034876_7 4Fe-4S binding domain - - - 0.000000000000000000000000000003441 119.0
CMS1_k127_4034876_8 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000001589 121.0
CMS1_k127_4034876_9 Haemolytic - - - 0.000000000000000000000001682 103.0
CMS1_k127_404383_0 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 286.0
CMS1_k127_404383_1 - - - - 0.000000000000000000000000000000000000000000000003032 176.0
CMS1_k127_4091843_0 PFAM Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 346.0
CMS1_k127_4091843_1 Periplasmic binding protein K07121 - - 0.000000000000000000000000000000000000000001325 159.0
CMS1_k127_4141045_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 423.0
CMS1_k127_4141045_1 FeS cluster assembly scaffold protein NifU K04488 - - 0.0000000000000000000000000000000000000000000000000000002508 195.0
CMS1_k127_4141045_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000005368 186.0
CMS1_k127_4155374_0 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 5.178e-277 872.0
CMS1_k127_4155374_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 1.578e-217 687.0
CMS1_k127_4155374_10 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000001063 123.0
CMS1_k127_4155374_11 SOS response associated peptidase (SRAP) - - - 0.0002798 45.0
CMS1_k127_4155374_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 593.0
CMS1_k127_4155374_3 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 493.0
CMS1_k127_4155374_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 417.0
CMS1_k127_4155374_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 396.0
CMS1_k127_4155374_6 glucosamine-1-phosphate N-acetyltransferase activity K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 306.0
CMS1_k127_4155374_7 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
CMS1_k127_4155374_8 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000000000000000009648 205.0
CMS1_k127_4155374_9 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000774 165.0
CMS1_k127_4172446_0 MMPL family K07003 - - 2.872e-293 923.0
CMS1_k127_4172446_1 PFAM Electron transfer flavoprotein alpha K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 445.0
CMS1_k127_4172446_2 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 427.0
CMS1_k127_4172446_3 poly(3-hydroxybutyrate) depolymerase activity K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 384.0
CMS1_k127_4172446_4 DNA-3-methyladenine glycosylase activity K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 303.0
CMS1_k127_4172446_5 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000115 228.0
CMS1_k127_4172446_6 PFAM toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000003932 177.0
CMS1_k127_4172446_7 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000001782 142.0
CMS1_k127_4201860_0 PFAM Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000004132 189.0
CMS1_k127_4201860_1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000009123 136.0
CMS1_k127_4201860_2 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000000000000000000000008835 106.0
CMS1_k127_4201860_3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 0.000002423 54.0
CMS1_k127_4201860_4 - - - - 0.000009884 51.0
CMS1_k127_4238390_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 604.0
CMS1_k127_4238390_1 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 368.0
CMS1_k127_4238390_2 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000146 184.0
CMS1_k127_4272286_0 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 1.022e-214 684.0
CMS1_k127_4272286_1 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000006489 174.0
CMS1_k127_4272286_2 Arsenical pump membrane protein - GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008324,GO:0008490,GO:0008509,GO:0015075,GO:0015103,GO:0015105,GO:0015291,GO:0015318,GO:0015399,GO:0015405,GO:0015446,GO:0015698,GO:0015700,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043225,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098656,GO:0098660,GO:0099131,GO:0099132,GO:0099133,GO:1901683,GO:1901684 - 0.00000000000000000000000000000000000000006884 159.0
CMS1_k127_4272286_3 cyclic nucleotide binding K07058,K14266 - 1.14.19.9 0.000000000000000000000000000202 118.0
CMS1_k127_4272286_4 - - - - 0.00000000000000001493 84.0
CMS1_k127_4272286_5 PFAM Cupin 2, conserved barrel - - - 0.000000007847 58.0
CMS1_k127_4272286_6 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000004277 65.0
CMS1_k127_4272286_7 Recombinase zinc beta ribbon domain - - - 0.0001315 44.0
CMS1_k127_429245_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 575.0
CMS1_k127_429245_1 Surface antigen K07277 - - 0.0000000000000000000000000000000000003359 149.0
CMS1_k127_438035_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1252.0
CMS1_k127_438035_1 FAD dependent oxidoreductase K16885 - - 2.516e-242 752.0
CMS1_k127_438035_2 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 316.0
CMS1_k127_438035_3 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 305.0
CMS1_k127_438035_4 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 298.0
CMS1_k127_438035_5 reductase, beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 295.0
CMS1_k127_4421847_0 MCRA family - - - 5.47e-248 774.0
CMS1_k127_4421847_1 PFAM SapC family protein - - - 0.000000000000000008595 85.0
CMS1_k127_4421847_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000004551 55.0
CMS1_k127_4494145_0 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.000000000000000000000000000000002579 134.0
CMS1_k127_4494145_1 - - - - 0.0000000000000000000000000000005599 127.0
CMS1_k127_452976_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 428.0
CMS1_k127_452976_1 PilZ domain - - - 0.0000000000000000001559 94.0
CMS1_k127_452976_2 Heavy-metal resistance K07803 - - 0.00000002255 59.0
CMS1_k127_4538080_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 448.0
CMS1_k127_4538080_1 PFAM AzlC family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001308 260.0
CMS1_k127_4538080_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000005319 140.0
CMS1_k127_4538080_3 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000000000000000000000004403 132.0
CMS1_k127_4548459_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 525.0
CMS1_k127_4548459_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003207 274.0
CMS1_k127_4548459_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000003043 171.0
CMS1_k127_4558281_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 398.0
CMS1_k127_4558281_1 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 345.0
CMS1_k127_4558281_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009405,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0020012,GO:0030312,GO:0030682,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000008237 243.0
CMS1_k127_4558281_3 Nitroreductase family - - - 0.00000000000000000000000000000000001701 136.0
CMS1_k127_4575370_0 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 343.0
CMS1_k127_4575370_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008387 278.0
CMS1_k127_4575370_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
CMS1_k127_4575370_3 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000002464 229.0
CMS1_k127_4575370_4 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000005398 200.0
CMS1_k127_4587486_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 581.0
CMS1_k127_4587486_1 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 329.0
CMS1_k127_4587486_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000002172 111.0
CMS1_k127_4587486_3 Belongs to the HesB IscA family - - - 0.0001172 44.0
CMS1_k127_4588669_0 UvrD REP helicase K03657 - 3.6.4.12 7.284e-251 789.0
CMS1_k127_4588669_1 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000001263 118.0
CMS1_k127_4600294_0 BadF BadG BcrA BcrD - - - 7.172e-217 685.0
CMS1_k127_4600294_1 Peptidase family U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 473.0
CMS1_k127_4600294_2 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000001642 224.0
CMS1_k127_4600294_3 Histone deacetylase domain - - - 0.00000000000000000000000000000002954 128.0
CMS1_k127_4604630_0 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 405.0
CMS1_k127_4604630_1 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.0000001002 54.0
CMS1_k127_4637718_0 Belongs to the ClpX chaperone family - - - 2.733e-248 778.0
CMS1_k127_4637718_1 PFAM Radical SAM domain protein K22226 - - 1.925e-198 622.0
CMS1_k127_4638995_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 596.0
CMS1_k127_4638995_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 533.0
CMS1_k127_4638995_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 301.0
CMS1_k127_4638995_3 Pas domain s-box - - - 0.000000000000000000000000000000000000000000000001634 179.0
CMS1_k127_4645848_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 531.0
CMS1_k127_4645848_1 Mediates influx of magnesium ions K03284 - - 0.0000001632 53.0
CMS1_k127_4677417_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1102.0
CMS1_k127_4677417_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 3.16e-216 682.0
CMS1_k127_4677417_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 477.0
CMS1_k127_4677417_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 457.0
CMS1_k127_4677417_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001633 248.0
CMS1_k127_4677417_5 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000000000000000000000000000000000000000003751 239.0
CMS1_k127_4677417_6 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000001025 228.0
CMS1_k127_4677417_7 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000000006687 145.0
CMS1_k127_4677417_8 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000009605 105.0
CMS1_k127_4677417_9 OST-HTH/LOTUS domain - - - 0.0000000000002244 70.0
CMS1_k127_4681691_0 AAA domain - - - 1.282e-262 821.0
CMS1_k127_4681691_1 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000001985 239.0
CMS1_k127_4681691_2 IstB domain protein ATP-binding protein - - - 0.0000000000000000000000000000000000000000000002072 176.0
CMS1_k127_4681691_3 - - - - 0.000000000000000000000001728 106.0
CMS1_k127_4681691_4 - - - - 0.00000000000000000000444 98.0
CMS1_k127_4686491_0 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 485.0
CMS1_k127_4686491_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 471.0
CMS1_k127_4686491_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 414.0
CMS1_k127_4686491_3 Unextendable partial coding region - - - 0.000000000000000102 81.0
CMS1_k127_4693436_0 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 2.192e-229 726.0
CMS1_k127_4693436_1 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 496.0
CMS1_k127_4698_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 396.0
CMS1_k127_4698_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 367.0
CMS1_k127_4698_2 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000001902 190.0
CMS1_k127_4698_3 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000001785 174.0
CMS1_k127_4698_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000005731 151.0
CMS1_k127_4698_5 Methylamine utilisation protein MauE - - - 0.0000000000000000000000000000006143 128.0
CMS1_k127_4698_6 - - - - 0.000000000000000000009227 93.0
CMS1_k127_4698_7 - - - - 0.00005725 48.0
CMS1_k127_4714879_0 PFAM Radical SAM - - - 2.362e-225 712.0
CMS1_k127_4714879_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 5.59e-216 678.0
CMS1_k127_4714879_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.029e-212 664.0
CMS1_k127_4714879_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 582.0
CMS1_k127_4714879_4 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 483.0
CMS1_k127_4714879_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 426.0
CMS1_k127_4714879_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 365.0
CMS1_k127_4714879_7 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 331.0
CMS1_k127_4714879_8 Essential cell division protein K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000004969 233.0
CMS1_k127_4714879_9 SET domain K07117 - - 0.00000001488 56.0
CMS1_k127_4721395_0 belongs to the aldehyde dehydrogenase family K00128,K00131,K00135,K00140 - 1.2.1.16,1.2.1.18,1.2.1.20,1.2.1.27,1.2.1.3,1.2.1.79,1.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 437.0
CMS1_k127_4721395_1 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 386.0
CMS1_k127_4721395_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000006102 155.0
CMS1_k127_4721395_3 Belongs to the ompA family K03286 - - 0.00000000000000000000000000002881 124.0
CMS1_k127_4721395_4 CoA binding domain K01905,K09181,K22224 - 6.2.1.13 0.00002848 47.0
CMS1_k127_472462_0 - - - - 0.0000000004857 72.0
CMS1_k127_472462_1 Carbohydrate phosphorylase K00688,K16153 - 2.4.1.1,2.4.1.11 0.00000002535 55.0
CMS1_k127_4733439_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 9.008e-314 980.0
CMS1_k127_4733439_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 1.144e-194 613.0
CMS1_k127_4733439_2 ABC transporter K02056 - 3.6.3.17 0.000000000000000001844 87.0
CMS1_k127_4757562_0 AcrB/AcrD/AcrF family - - - 0.0 1522.0
CMS1_k127_4757562_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1326.0
CMS1_k127_4757562_2 Malate synthase K01638 - 2.3.3.9 0.0 1121.0
CMS1_k127_4757562_3 Putative peptidoglycan binding domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 421.0
CMS1_k127_4757562_4 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 368.0
CMS1_k127_4757562_5 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 305.0
CMS1_k127_4757562_6 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000002265 169.0
CMS1_k127_4762808_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 514.0
CMS1_k127_4762808_1 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 496.0
CMS1_k127_4762808_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
CMS1_k127_4762808_3 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008214 243.0
CMS1_k127_4762808_4 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000000000000000000000000000001279 164.0
CMS1_k127_4772722_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 5.001e-224 705.0
CMS1_k127_4772722_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 486.0
CMS1_k127_4787602_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K15792 - 6.3.2.10,6.3.2.13 6.018e-261 838.0
CMS1_k127_4787602_1 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 5.763e-221 698.0
CMS1_k127_4787602_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 399.0
CMS1_k127_4787602_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 304.0
CMS1_k127_4787602_4 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000992 186.0
CMS1_k127_4787602_5 - - - - 0.00000000000000000000003736 102.0
CMS1_k127_4824929_0 phosphoenolpyruvate-dependent sugar phosphotransferase system - - - 5.434e-194 613.0
CMS1_k127_4824929_1 Uncharacterized protein family (UPF0051) K07033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 516.0
CMS1_k127_4824929_2 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 294.0
CMS1_k127_4824929_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000003382 61.0
CMS1_k127_4839182_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.69e-258 802.0
CMS1_k127_4839182_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 4.154e-198 624.0
CMS1_k127_4839182_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 352.0
CMS1_k127_4839182_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 338.0
CMS1_k127_4839182_4 - - - - 0.00000000000000000000000000000000000000000000000000000000002824 215.0
CMS1_k127_4839182_5 - - - - 0.00000000000000000000000000000004322 129.0
CMS1_k127_4845077_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1048.0
CMS1_k127_4845352_0 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000003833 216.0
CMS1_k127_4845352_1 Protein of unknown function (DUF1559) - - - 0.000001061 60.0
CMS1_k127_48538_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 3.499e-218 683.0
CMS1_k127_48538_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 441.0
CMS1_k127_48538_10 Belongs to the UPF0102 family K07460 - - 0.0000000000000003239 83.0
CMS1_k127_48538_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 373.0
CMS1_k127_48538_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 303.0
CMS1_k127_48538_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 287.0
CMS1_k127_48538_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000003568 196.0
CMS1_k127_48538_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000001651 178.0
CMS1_k127_48538_7 protein conserved in bacteria (DUF2168) - - - 0.0000000000000000000000000000000000002785 147.0
CMS1_k127_48538_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000003803 139.0
CMS1_k127_48538_9 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000000001558 127.0
CMS1_k127_4855968_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000002794 231.0
CMS1_k127_4855968_1 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000009766 141.0
CMS1_k127_4866533_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 601.0
CMS1_k127_4866533_1 PFAM inner-membrane translocator K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 511.0
CMS1_k127_4866533_2 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 437.0
CMS1_k127_4866533_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000009219 85.0
CMS1_k127_4866533_4 Archaebacterial flagellin - - - 0.00000001092 58.0
CMS1_k127_4882077_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 514.0
CMS1_k127_4893665_0 4Fe-4S dicluster domain - - - 7.937e-208 648.0
CMS1_k127_4893665_1 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 469.0
CMS1_k127_4893665_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000001496 222.0
CMS1_k127_4893665_3 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000001036 199.0
CMS1_k127_4904668_0 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 327.0
CMS1_k127_4904668_1 Glycosyl transferase family 2 K09931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 289.0
CMS1_k127_4904668_2 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000001395 105.0
CMS1_k127_4914100_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 486.0
CMS1_k127_4914100_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006237 478.0
CMS1_k127_4914100_2 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002613 259.0
CMS1_k127_4914100_3 HD domain K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002658 242.0
CMS1_k127_4914100_4 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000491 231.0
CMS1_k127_4914100_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000008713 138.0
CMS1_k127_4946438_0 alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 297.0
CMS1_k127_4981809_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 7.426e-208 650.0
CMS1_k127_4981809_1 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 365.0
CMS1_k127_4981809_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 307.0
CMS1_k127_4981809_3 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003854 275.0
CMS1_k127_4981809_4 - - - - 0.000000000000000000000000000000000000000000000005951 175.0
CMS1_k127_4981809_5 - - - - 0.00000000000000000000000000000000000000003261 169.0
CMS1_k127_4988727_0 diguanylate cyclase K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 370.0
CMS1_k127_4988727_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000004407 183.0
CMS1_k127_4997800_0 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 293.0
CMS1_k127_4997800_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002899 258.0
CMS1_k127_5100427_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.583e-309 952.0
CMS1_k127_5100427_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 9.21e-249 774.0
CMS1_k127_5100427_10 Mitochondrial domain of unknown function (DUF1713) - - - 0.00000002815 55.0
CMS1_k127_5100427_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 472.0
CMS1_k127_5100427_3 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 424.0
CMS1_k127_5100427_4 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 312.0
CMS1_k127_5100427_5 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000009823 226.0
CMS1_k127_5100427_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000011 228.0
CMS1_k127_5100427_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000954 149.0
CMS1_k127_5100427_8 regulatory protein, FmdB family - - - 0.00000000000000000000000000000764 121.0
CMS1_k127_5100427_9 - - - - 0.000000000001022 76.0
CMS1_k127_514897_0 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 4.905e-260 810.0
CMS1_k127_514897_1 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000007983 159.0
CMS1_k127_514897_2 Sporulation related domain - - - 0.00001369 49.0
CMS1_k127_5149024_0 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 441.0
CMS1_k127_5149024_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 428.0
CMS1_k127_5149024_2 type II and III secretion system protein K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008666 248.0
CMS1_k127_5149024_3 PFAM Pilus assembly protein PilO K02664 - - 0.00000000000000000000000000000000000000000000000000005331 194.0
CMS1_k127_5149024_4 Pilus assembly protein, PilP K02665 - - 0.00000000000000000000000000000000005992 141.0
CMS1_k127_5149024_5 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000271 136.0
CMS1_k127_5149024_6 Helix-turn-helix - - - 0.000000000000000000000009238 101.0
CMS1_k127_530629_0 Sporulation initiation inhibitor protein Soj K03496 - - 0.000000000000000000000000000000000000000000000000000000000000005738 230.0
CMS1_k127_530629_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000009683 205.0
CMS1_k127_530629_2 ATP synthase B/B' CF(0) K02109 - - 0.00000000000000000000000000000000000000004376 159.0
CMS1_k127_530629_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000003068 126.0
CMS1_k127_530629_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000007671 126.0
CMS1_k127_5396906_0 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 556.0
CMS1_k127_5396906_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000527 274.0
CMS1_k127_5396906_2 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003539 261.0
CMS1_k127_5396906_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000002003 237.0
CMS1_k127_5396906_4 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000002542 119.0
CMS1_k127_5398232_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 7.103e-272 856.0
CMS1_k127_5398232_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 488.0
CMS1_k127_5398232_2 Bacterial SH3 domain homologues K07184 - - 0.000000000000000000000000000000000000000005065 162.0
CMS1_k127_5398232_3 - - - - 0.00000000000000000000000000000000008808 141.0
CMS1_k127_5398232_4 Polymer-forming cytoskeletal - - - 0.00000000000000000001201 98.0
CMS1_k127_5398232_5 peptidyl-tyrosine sulfation - - - 0.000000000000000661 85.0
CMS1_k127_5398232_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000004933 49.0
CMS1_k127_5398232_7 methyltransferase - - - 0.0002215 51.0
CMS1_k127_540583_0 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 516.0
CMS1_k127_540583_1 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 318.0
CMS1_k127_5413207_0 His Kinase A (phosphoacceptor) domain K10819 - 2.7.13.3 1.067e-236 750.0
CMS1_k127_5413207_1 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 585.0
CMS1_k127_5413207_10 Putative zinc- or iron-chelating domain - - - 0.0000000000004906 74.0
CMS1_k127_5413207_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 548.0
CMS1_k127_5413207_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 390.0
CMS1_k127_5413207_4 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 321.0
CMS1_k127_5413207_5 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 285.0
CMS1_k127_5413207_6 DoxX - - - 0.00000000000000000000000000000000000000000000000000000000004709 209.0
CMS1_k127_5413207_7 Redoxin domain protein - - - 0.0000000000000000000000000000000000000000008937 163.0
CMS1_k127_5413207_8 peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000005795 155.0
CMS1_k127_5413207_9 - - - - 0.00000000000000002399 87.0
CMS1_k127_5427303_0 Citrate transporter - - - 1.003e-280 874.0
CMS1_k127_5427303_1 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000002482 155.0
CMS1_k127_5427303_2 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000003008 145.0
CMS1_k127_5435446_0 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 342.0
CMS1_k127_5435446_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 338.0
CMS1_k127_5435446_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 293.0
CMS1_k127_5435446_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 289.0
CMS1_k127_5435446_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000000000000000000905 161.0
CMS1_k127_5435446_5 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000008136 145.0
CMS1_k127_5435446_6 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000000000000000002704 134.0
CMS1_k127_5441929_0 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 9.639e-265 819.0
CMS1_k127_5441929_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 1.322e-235 730.0
CMS1_k127_5441929_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 559.0
CMS1_k127_5441929_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 346.0
CMS1_k127_5441929_4 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 298.0
CMS1_k127_5441929_5 - - - - 0.0000000000000000000000000000000000000002053 152.0
CMS1_k127_5441929_6 Dissimilatory sulfite reductase - - - 0.00000000000000000000000000000004523 126.0
CMS1_k127_544324_0 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 316.0
CMS1_k127_544324_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000006711 199.0
CMS1_k127_544324_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000008423 196.0
CMS1_k127_5460427_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1159.0
CMS1_k127_5460427_1 PFAM nucleoside H symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006039 270.0
CMS1_k127_5460427_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000003037 214.0
CMS1_k127_5460427_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000001055 168.0
CMS1_k127_5465748_0 PFAM Alpha amylase K00700 - 2.4.1.18 7.246e-297 923.0
CMS1_k127_5465748_1 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 1.46e-236 739.0
CMS1_k127_5465748_2 PFAM NapC NirT cytochrome c K02569,K03532 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 312.0
CMS1_k127_5465748_3 ACT domain - - - 0.0000000000000000000000007309 109.0
CMS1_k127_5465748_4 phosphorylase K00688 - 2.4.1.1 0.000001333 49.0
CMS1_k127_5475479_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1052.0
CMS1_k127_5475479_1 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 537.0
CMS1_k127_5475479_2 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 482.0
CMS1_k127_5475479_3 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 440.0
CMS1_k127_5475479_4 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 367.0
CMS1_k127_5475479_5 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006648 325.0
CMS1_k127_5475479_6 Sporulation and spore germination - - - 0.0000000000000000000000000000000000000000000002217 173.0
CMS1_k127_5475479_7 YacP-like NYN domain K06962 - - 0.00000000001628 65.0
CMS1_k127_5488744_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 428.0
CMS1_k127_5488744_1 cyclic nucleotide-binding K01420,K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 321.0
CMS1_k127_5488744_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 289.0
CMS1_k127_5488744_3 PFAM peptidase S45 penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.000000000000000000000000000000000000000000000000000000000000001526 223.0
CMS1_k127_5488744_4 PFAM Carboxymuconolactone decarboxylase - - - 0.000000000000000000000000003406 113.0
CMS1_k127_5494810_0 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 379.0
CMS1_k127_5494810_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 340.0
CMS1_k127_5494810_2 protein histidine kinase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 341.0
CMS1_k127_5494810_3 Transporter of a GTP-driven Fe(2 ) uptake system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 307.0
CMS1_k127_5494810_4 PFAM Mammalian cell entry related domain protein K02067,K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001525 277.0
CMS1_k127_5494810_5 CobQ CobB MinD ParA nucleotide binding K04562 - - 0.000000000000000000000000000000000000000000000000000000000005818 218.0
CMS1_k127_5494810_6 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000000000000005039 173.0
CMS1_k127_5494810_7 Helix-turn-helix domain - - - 0.000001324 58.0
CMS1_k127_5496448_0 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000008831 106.0
CMS1_k127_5502025_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.724e-240 746.0
CMS1_k127_5502025_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 546.0
CMS1_k127_5502025_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000032 115.0
CMS1_k127_5502025_2 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 485.0
CMS1_k127_5502025_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 464.0
CMS1_k127_5502025_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 396.0
CMS1_k127_5502025_5 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 294.0
CMS1_k127_5502025_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 293.0
CMS1_k127_5502025_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000001395 157.0
CMS1_k127_5502025_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000401 151.0
CMS1_k127_5502025_9 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000003568 132.0
CMS1_k127_5505926_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 516.0
CMS1_k127_5505926_1 cheY-homologous receiver domain - - - 0.000000000006979 68.0
CMS1_k127_5505926_3 PilZ domain - - - 0.00009243 46.0
CMS1_k127_5513006_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 565.0
CMS1_k127_5513006_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 564.0
CMS1_k127_5513006_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 468.0
CMS1_k127_5513006_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 379.0
CMS1_k127_5513006_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000002962 124.0
CMS1_k127_5525091_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 3.733e-255 790.0
CMS1_k127_5525091_1 Cro/C1-type HTH DNA-binding domain - - - 9.647e-211 661.0
CMS1_k127_5525091_2 pyruvate phosphate dikinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003493 254.0
CMS1_k127_5526263_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 3.649e-240 752.0
CMS1_k127_5526263_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 441.0
CMS1_k127_5526263_2 membrane-associated HD superfamily hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002356 258.0
CMS1_k127_5539268_0 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 597.0
CMS1_k127_5539268_1 Penicillin-binding Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 474.0
CMS1_k127_5539268_2 PFAM Iron-containing alcohol dehydrogenase K19714 - 1.1.3.48 0.00000000000000000000000000000000000000000000341 166.0
CMS1_k127_5542002_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 4.397e-247 769.0
CMS1_k127_5542002_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.974e-233 729.0
CMS1_k127_5542002_2 - - - - 0.0000000000000000000000004827 108.0
CMS1_k127_5544013_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 409.0
CMS1_k127_5544013_1 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009136 282.0
CMS1_k127_5544013_2 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003744 266.0
CMS1_k127_5544013_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000001685 104.0
CMS1_k127_5571112_0 AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 541.0
CMS1_k127_5571112_1 Domain of unknown function DUF302 - - - 0.00000000000000001358 83.0
CMS1_k127_5571112_2 Short C-terminal domain K08982 - - 0.00000000000001968 78.0
CMS1_k127_5571112_3 - - - - 0.00004754 45.0
CMS1_k127_5572242_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 6.515e-209 657.0
CMS1_k127_5582397_0 DEAD DEAH box helicase K06877 - - 0.0 1292.0
CMS1_k127_5582397_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 492.0
CMS1_k127_5582397_2 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 402.0
CMS1_k127_5582397_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 286.0
CMS1_k127_5582397_4 Putative TM nitroreductase - - - 0.00000000000000000000000000000000003516 142.0
CMS1_k127_5582397_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0001668 44.0
CMS1_k127_5594552_0 Transposase zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 383.0
CMS1_k127_5594552_1 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001923 278.0
CMS1_k127_5596763_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 5.148e-202 636.0
CMS1_k127_5596763_1 PFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 574.0
CMS1_k127_5596763_10 belongs to the thioredoxin family K03671,K05838 - - 0.00000000000000000003912 96.0
CMS1_k127_5596763_2 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 555.0
CMS1_k127_5596763_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 481.0
CMS1_k127_5596763_4 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 405.0
CMS1_k127_5596763_5 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007397 234.0
CMS1_k127_5596763_6 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000001526 221.0
CMS1_k127_5596763_7 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000000000000000000000000000002153 195.0
CMS1_k127_5596763_8 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000008806 154.0
CMS1_k127_5596763_9 - - - - 0.00000000000000000000001391 106.0
CMS1_k127_5611888_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 337.0
CMS1_k127_5611888_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000001233 180.0
CMS1_k127_5618470_0 Transcriptional regulator, LysR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 323.0
CMS1_k127_5618470_1 Psort location Cytoplasmic, score - - - 0.00000000000000000008976 92.0
CMS1_k127_5618470_2 Mu-like prophage protein Gp16 - - - 0.000000007065 63.0
CMS1_k127_5625624_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 566.0
CMS1_k127_5625624_1 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
CMS1_k127_5625624_2 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000005887 204.0
CMS1_k127_5625624_3 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.000000000000000000000000000000000000008896 150.0
CMS1_k127_5626241_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 8.553e-282 885.0
CMS1_k127_5626241_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 376.0
CMS1_k127_5626241_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 340.0
CMS1_k127_5626241_3 EamA-like transporter family - - - 0.00000000000000000000000000000000005084 136.0
CMS1_k127_5626241_4 response regulator, receiver - - - 0.000000000000000000000000001458 128.0
CMS1_k127_5641194_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 4.724e-245 763.0
CMS1_k127_5641194_1 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 488.0
CMS1_k127_5643430_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 9.989e-253 785.0
CMS1_k127_5643430_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 542.0
CMS1_k127_5654370_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1167.0
CMS1_k127_5654370_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.21e-220 689.0
CMS1_k127_5654370_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 4.082e-206 645.0
CMS1_k127_5654370_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 499.0
CMS1_k127_5654370_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 341.0
CMS1_k127_5654370_5 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 287.0
CMS1_k127_5654370_6 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.0000000000000000000000000000000002541 132.0
CMS1_k127_5654370_8 Ami_3 K01448 - 3.5.1.28 0.0000001017 57.0
CMS1_k127_5654370_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00004165 46.0
CMS1_k127_5664440_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 408.0
CMS1_k127_5664440_1 PFAM Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000001265 205.0
CMS1_k127_5664440_2 Putative zinc- or iron-chelating domain K06940 - - 0.000000002913 62.0
CMS1_k127_5665101_0 Aromatic amino acid lyase K01745 - 4.3.1.3 2.91e-239 749.0
CMS1_k127_5665101_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 4.851e-239 749.0
CMS1_k127_5665101_10 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000004675 201.0
CMS1_k127_5665101_11 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.0000000000000000000000000000000000000000000000000000002356 196.0
CMS1_k127_5665101_12 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000611 193.0
CMS1_k127_5665101_13 - - - - 0.0000000000000000000000000000000000000000000000001316 191.0
CMS1_k127_5665101_14 - - - - 0.00000000002734 65.0
CMS1_k127_5665101_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.357e-232 736.0
CMS1_k127_5665101_3 imidazolonepropionase activity K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 610.0
CMS1_k127_5665101_4 Glutamate formiminotransferase K00603 - 2.1.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 469.0
CMS1_k127_5665101_5 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 385.0
CMS1_k127_5665101_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 366.0
CMS1_k127_5665101_7 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 351.0
CMS1_k127_5665101_8 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 293.0
CMS1_k127_5665101_9 AsnC-type helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002124 223.0
CMS1_k127_5696828_0 Radical SAM N-terminal - - - 8.1e-224 706.0
CMS1_k127_5696828_1 PFAM Glycosyl transferase family 2 K00752,K11936 - 2.4.1.212 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 491.0
CMS1_k127_5696828_2 Methyltransferase K06968 - 2.1.1.186 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 262.0
CMS1_k127_5696828_3 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000001096 223.0
CMS1_k127_5696828_4 - - - - 0.00000000000000000000001743 102.0
CMS1_k127_5696828_5 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.00002435 51.0
CMS1_k127_5710227_0 PFAM ATP-binding region ATPase domain protein K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 445.0
CMS1_k127_5710227_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000001223 57.0
CMS1_k127_5710227_2 type II secretion system K02653 - - 0.0000001426 52.0
CMS1_k127_5713385_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1675.0
CMS1_k127_5713385_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.607e-304 943.0
CMS1_k127_5713385_10 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000005607 141.0
CMS1_k127_5713385_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.279e-248 772.0
CMS1_k127_5713385_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 511.0
CMS1_k127_5713385_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 438.0
CMS1_k127_5713385_5 signal peptide peptidase SppA K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 341.0
CMS1_k127_5713385_6 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 329.0
CMS1_k127_5713385_7 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 303.0
CMS1_k127_5713385_8 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 287.0
CMS1_k127_5713385_9 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000279 265.0
CMS1_k127_5720130_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.319e-250 784.0
CMS1_k127_5720130_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 576.0
CMS1_k127_5720130_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 370.0
CMS1_k127_5720130_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000001252 116.0
CMS1_k127_5733872_0 acyl-CoA dehydrogenase K09456 - - 5.706e-302 934.0
CMS1_k127_5733872_1 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 1.019e-286 893.0
CMS1_k127_5733872_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 2.902e-213 670.0
CMS1_k127_5733872_3 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002666 245.0
CMS1_k127_5738331_0 cysteine-tRNA ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 383.0
CMS1_k127_5738331_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000531 282.0
CMS1_k127_5738331_2 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000002236 237.0
CMS1_k127_57612_0 cyclopropane-fatty-acyl-phospholipid synthase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 548.0
CMS1_k127_57612_1 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 325.0
CMS1_k127_57612_2 Protein of unknown function (DUF1365) K00574,K09701 - 2.1.1.79 0.000000000000000000000000000000000000000000000000002791 184.0
CMS1_k127_57612_3 Major facilitator Superfamily K03292 - - 0.000000000000000003588 85.0
CMS1_k127_5770661_0 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 529.0
CMS1_k127_5770661_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000001564 248.0
CMS1_k127_5806015_0 Glycosyl transferases group 1 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 412.0
CMS1_k127_5806015_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001545 243.0
CMS1_k127_5806015_2 COGs COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000004084 229.0
CMS1_k127_581543_0 Involved in molybdopterin and thiamine biosynthesis, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 382.0
CMS1_k127_5818357_0 Thioesterase K01075,K07107 - 3.1.2.23 0.00000000000000000000000000000003157 130.0
CMS1_k127_5818357_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000282 98.0
CMS1_k127_5818357_2 Lysophospholipase K01048 - 3.1.1.5 0.0000000000008518 79.0
CMS1_k127_5862397_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 552.0
CMS1_k127_5862397_1 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 362.0
CMS1_k127_5862397_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 329.0
CMS1_k127_5906305_0 Phosphate acyltransferases K03928 - 3.1.1.1 2.007e-229 727.0
CMS1_k127_5906305_1 Glycine-zipper domain - - - 0.000000000000000000000000000000366 126.0
CMS1_k127_6007659_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 4.424e-250 781.0
CMS1_k127_6007659_1 VWA containing CoxE family protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 561.0
CMS1_k127_6007659_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001217 261.0
CMS1_k127_6036413_0 TonB dependent receptor K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 565.0
CMS1_k127_6036413_1 TIGRFAM DNA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 440.0
CMS1_k127_6036413_2 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 368.0
CMS1_k127_6061583_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 539.0
CMS1_k127_6061583_1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000000000000000000000000000007023 139.0
CMS1_k127_6061583_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000117 75.0
CMS1_k127_6091504_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.26e-299 926.0
CMS1_k127_6091504_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009751 372.0
CMS1_k127_6091504_2 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 333.0
CMS1_k127_6091504_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000002003 99.0
CMS1_k127_6125313_0 Participates in initiation and elongation during chromosome replication K02314,K02316 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 426.0
CMS1_k127_6125313_1 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009503 257.0
CMS1_k127_6125313_2 ORF6N domain - - - 0.00000000000000000000000000005204 117.0
CMS1_k127_6125313_3 dihydromethanopterin reductase activity K00176,K06411,K12527 - 1.2.7.3,1.97.1.9 0.000000000000000000000000985 104.0
CMS1_k127_6125313_4 PFAM ATPase associated with various cellular activities, AAA-4 K03655 - 3.6.4.12 0.000000000001243 70.0
CMS1_k127_6125313_5 Methionine synthase B12-binding module cap domain protein - - - 0.000000004011 59.0
CMS1_k127_6192880_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 525.0
CMS1_k127_6192880_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 432.0
CMS1_k127_6192880_2 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004541 253.0
CMS1_k127_6279797_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1259.0
CMS1_k127_6279797_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 493.0
CMS1_k127_6279797_2 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 340.0
CMS1_k127_6279797_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000002901 214.0
CMS1_k127_6279797_4 Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000001054 127.0
CMS1_k127_6279797_5 - - - - 0.000000000000000000000001941 106.0
CMS1_k127_64777_0 TIGRFAM exonuclease SbcC K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 368.0
CMS1_k127_64777_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000006279 59.0
CMS1_k127_67472_0 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 344.0
CMS1_k127_67472_1 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 323.0
CMS1_k127_67472_2 belongs to the thioredoxin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001852 251.0
CMS1_k127_67472_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000001264 131.0
CMS1_k127_683927_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10909,K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 310.0
CMS1_k127_683927_1 Transcriptional regulator - - - 0.00000000000000000000000004012 109.0
CMS1_k127_683927_2 PFAM response regulator receiver - - - 0.0000000000000000000000004953 108.0
CMS1_k127_683927_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000007736 54.0
CMS1_k127_700140_0 Endoribonuclease that initiates mRNA decay K18682 - - 9.401e-238 743.0
CMS1_k127_73406_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 556.0
CMS1_k127_73406_1 Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001418 243.0
CMS1_k127_73406_2 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.0000000000002491 70.0
CMS1_k127_773298_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.38e-200 629.0
CMS1_k127_773298_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000007992 147.0
CMS1_k127_77885_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.168e-218 687.0
CMS1_k127_77885_1 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 403.0
CMS1_k127_77885_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 373.0
CMS1_k127_77885_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008754 275.0
CMS1_k127_77885_4 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.000000000000000000000000000000000000000000000000000000000000000007229 231.0
CMS1_k127_77885_5 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000001359 205.0
CMS1_k127_77885_6 - - - - 0.0000000000000000000000000000005715 126.0
CMS1_k127_7981_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1032.0
CMS1_k127_7981_1 PFAM peptidase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 399.0
CMS1_k127_7981_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000003484 186.0
CMS1_k127_7981_3 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000003903 152.0
CMS1_k127_839258_0 phosphorylase K00688 - 2.4.1.1 1.404e-261 819.0
CMS1_k127_886727_0 PFAM aminotransferase class I and II - - - 2.586e-197 623.0
CMS1_k127_888982_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 432.0
CMS1_k127_888982_1 ACT domain - - - 0.0000000000000000000000000000000000000000000000000000000000001149 214.0
CMS1_k127_902388_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1114.0
CMS1_k127_902388_1 PFAM Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 564.0
CMS1_k127_902388_2 PFAM Glutaredoxin K06191 - - 0.00000000000000000000000000000000002883 136.0
CMS1_k127_90713_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 495.0
CMS1_k127_90713_1 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000000000000000007555 209.0
CMS1_k127_90713_2 - - - - 0.0000000000000000000000000000000000000000000000001058 178.0
CMS1_k127_90713_3 Protein of unknown function (DUF1641) - - - 0.0000000000000000000000000000000000000000000000003697 183.0
CMS1_k127_90713_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000002863 126.0
CMS1_k127_90713_5 nitric oxide reductase activity K03809 - 1.6.5.2 0.00000007305 55.0
CMS1_k127_90713_6 - - - - 0.00006318 45.0
CMS1_k127_91137_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 1.672e-215 678.0
CMS1_k127_91137_1 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 361.0
CMS1_k127_91137_2 PFAM flavin reductase domain protein FMN-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 288.0
CMS1_k127_91137_3 - K18700 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042802,GO:0042803,GO:0046983 3.1.2.29 0.00000000000000000000000000000000000000000000000000000000000005951 216.0
CMS1_k127_91137_4 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000001208 172.0
CMS1_k127_91137_5 RNA recognition motif - - - 0.000000000000000000000000002131 116.0
CMS1_k127_913139_0 CBS domain K00974 - 2.7.7.72 9.263e-254 795.0
CMS1_k127_916702_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 594.0
CMS1_k127_916702_1 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 429.0
CMS1_k127_916702_2 PFAM inner-membrane translocator K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 411.0
CMS1_k127_916702_3 Archaebacterial flagellin - - - 0.000000000000000000000000000000000000000000000000009095 187.0
CMS1_k127_917669_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 392.0
CMS1_k127_917669_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 359.0
CMS1_k127_917669_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000001918 236.0
CMS1_k127_917669_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000004388 162.0
CMS1_k127_919590_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 497.0
CMS1_k127_919590_1 Putative small multi-drug export protein - - - 0.00000000000000000000009049 107.0
CMS1_k127_927512_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 1.851e-204 644.0
CMS1_k127_927512_1 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 530.0
CMS1_k127_927512_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000002385 233.0
CMS1_k127_927512_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000004152 66.0
CMS1_k127_927512_4 - - - - 0.0002045 45.0
CMS1_k127_927720_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 588.0
CMS1_k127_927720_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 373.0
CMS1_k127_927720_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 293.0
CMS1_k127_927720_3 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000008209 180.0
CMS1_k127_927720_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000001125 70.0
CMS1_k127_927720_5 - - - - 0.00005876 49.0
CMS1_k127_93030_0 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 324.0
CMS1_k127_93030_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 304.0
CMS1_k127_93030_2 ABC-type sugar transport system, periplasmic component K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003128 243.0
CMS1_k127_93030_3 ribosylpyrimidine nucleosidase activity - - - 0.0000000000000000000000000000001662 128.0
CMS1_k127_934031_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1032.0
CMS1_k127_934031_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 1.422e-216 681.0
CMS1_k127_934031_2 - - - - 0.0000000000000000001348 94.0
CMS1_k127_936516_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 8.594e-217 686.0
CMS1_k127_936516_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000003409 219.0
CMS1_k127_936516_2 Domain of unknown function (DUF3842) - - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
CMS1_k127_936516_3 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP - - - 0.000000000000000000000000000000000000000000000000004859 186.0
CMS1_k127_936516_4 Smr domain - - - 0.00000000000000000000000000006958 118.0
CMS1_k127_936516_5 Predicted RNA-binding protein - - - 0.0000000000000000000004512 98.0
CMS1_k127_936516_6 Domain of unknown function (DUF4445) - - - 0.000000000926 60.0
CMS1_k127_972454_0 4Fe-4S dicluster domain K16887 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 541.0
CMS1_k127_972454_1 Two component transcriptional regulator, winged helix family K02483,K07662 - - 0.000000000000000000000000000000000000000000000000003472 186.0
CMS1_k127_972454_3 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000003202 124.0
CMS1_k127_972454_4 DGC domain - - - 0.00000000000000000000000000005311 118.0
CMS1_k127_972454_6 DDE superfamily endonuclease - - - 0.000000002665 65.0
CMS1_k127_973816_0 ABC transporter transmembrane region K06147,K18889 - - 8.75e-249 780.0
CMS1_k127_973816_1 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 1.11e-246 777.0
CMS1_k127_973816_2 AIR synthase related protein, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 554.0
CMS1_k127_973816_3 Archaea-specific editing domain of threonyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000000000000002807 205.0
CMS1_k127_973816_4 GlutRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000001439 203.0
CMS1_k127_973816_5 ABC transporter transmembrane region K06147,K18890 - - 0.0000000000000000000005424 98.0
CMS1_k127_974594_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0 1491.0
CMS1_k127_974594_1 Belongs to the SfsA family K06206 - - 0.00000000000000000235 85.0
CMS1_k127_976336_0 sigma54 specific transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 517.0
CMS1_k127_976336_1 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008988 248.0
CMS1_k127_976336_2 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000001537 88.0
CMS1_k127_976336_3 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000314 82.0
CMS1_k127_976336_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000002265 54.0
CMS1_k127_979299_0 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 569.0
CMS1_k127_979299_1 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000001326 158.0
CMS1_k127_979299_2 NfeD-like C-terminal, partner-binding - - - 0.000000000000000007429 87.0
CMS1_k127_99110_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0 1140.0
CMS1_k127_99110_1 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 589.0
CMS1_k127_99110_2 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 490.0
CMS1_k127_99110_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 430.0
CMS1_k127_99110_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000006494 198.0
CMS1_k127_99110_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000002233 188.0
CMS1_k127_99110_6 - - - - 0.00000000000000000000000000000000000000234 151.0
CMS1_k127_99110_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000006047 90.0
CMS1_k127_997118_0 PKS_PP_betabranch - - - 0.0 1033.0