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Overview

ID MAG00496
Name CMS3_bin.127
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family UBA6910
Genus UBA6910
Species
Assembly information
Completeness (%) 75.13
Contamination (%) 2.87
GC content (%) 65.0
N50 (bp) 11,204
Genome size (bp) 2,857,200

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2844

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1017993_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1350.0
CMS3_k127_1017993_1 Recombinase zinc beta ribbon domain - - - 4.273e-212 662.0
CMS3_k127_1017993_10 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000001054 259.0
CMS3_k127_1017993_11 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000001032 227.0
CMS3_k127_1017993_12 OsmC-like protein - - - 0.00000000000000000000000000000000001501 141.0
CMS3_k127_1017993_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 606.0
CMS3_k127_1017993_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 582.0
CMS3_k127_1017993_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 582.0
CMS3_k127_1017993_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 551.0
CMS3_k127_1017993_6 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 486.0
CMS3_k127_1017993_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 468.0
CMS3_k127_1017993_8 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 366.0
CMS3_k127_1017993_9 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 303.0
CMS3_k127_1024477_0 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 469.0
CMS3_k127_1024477_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 375.0
CMS3_k127_1024477_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006364 291.0
CMS3_k127_1024477_3 Histidine triad (HIT) - - - 0.000000000001965 68.0
CMS3_k127_1031198_0 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 372.0
CMS3_k127_1031198_1 SurA N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001886 286.0
CMS3_k127_1031198_2 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000001517 220.0
CMS3_k127_1031198_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000003928 228.0
CMS3_k127_1031198_4 - - - - 0.00000000000000000000000000000000000000000000000004631 202.0
CMS3_k127_1031198_5 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000006709 179.0
CMS3_k127_1031198_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000001415 106.0
CMS3_k127_1031198_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000001715 84.0
CMS3_k127_1031198_8 - - - - 0.000000000008688 76.0
CMS3_k127_1039831_0 Cytochrome c5530 family protein - - - 2.389e-219 709.0
CMS3_k127_1039831_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 295.0
CMS3_k127_1039831_2 17 kDa surface antigen - - - 0.00000000000000000000000000000009551 126.0
CMS3_k127_1039831_3 - - - - 0.000000000000000000000000001615 126.0
CMS3_k127_1039831_4 Protein of unknown function (DUF3568) - - - 0.000000000000000000000000002131 116.0
CMS3_k127_1039831_5 - - - - 0.0000000000000000000003238 101.0
CMS3_k127_1039831_7 - - - - 0.0000000008236 63.0
CMS3_k127_1040795_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 469.0
CMS3_k127_1040795_1 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004686 281.0
CMS3_k127_1040795_2 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000001688 201.0
CMS3_k127_1040795_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000896 181.0
CMS3_k127_1040795_4 Aldo/keto reductase family - - - 0.0000000000000000000000002981 108.0
CMS3_k127_1040795_5 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.0000000000005914 74.0
CMS3_k127_104874_0 Pfam SNARE associated Golgi protein - - - 8.861e-228 728.0
CMS3_k127_104874_1 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 510.0
CMS3_k127_104874_10 - - - - 0.000000000000000000002437 97.0
CMS3_k127_104874_11 Citrate transporter - - - 0.0000003037 53.0
CMS3_k127_104874_2 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 381.0
CMS3_k127_104874_3 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 334.0
CMS3_k127_104874_4 NADPH quinone reductase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 292.0
CMS3_k127_104874_5 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009339 256.0
CMS3_k127_104874_6 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000001594 220.0
CMS3_k127_104874_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K09181,K15520 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0030551,GO:0030552,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.3.1.189 0.0000000000000000000000000000000000000000000000000000000002933 207.0
CMS3_k127_104874_8 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000001099 185.0
CMS3_k127_104874_9 Protein of unknown function (DUF3568) - - - 0.000000000000000000000000004002 115.0
CMS3_k127_1119654_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1014.0
CMS3_k127_1119654_1 PFAM Aminotransferase, class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 472.0
CMS3_k127_1119654_2 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 390.0
CMS3_k127_1119654_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 385.0
CMS3_k127_1119654_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
CMS3_k127_1119654_5 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000008685 223.0
CMS3_k127_1119654_6 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000008028 167.0
CMS3_k127_1119654_7 Universal stress protein - - - 0.0000000000000000000000000000000006595 137.0
CMS3_k127_1119654_8 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000008103 91.0
CMS3_k127_1167589_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1129.0
CMS3_k127_1167589_1 Pfam Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 575.0
CMS3_k127_1167589_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 543.0
CMS3_k127_1167589_3 PFAM type II secretion system protein E K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 481.0
CMS3_k127_1167589_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 449.0
CMS3_k127_1167589_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006911 284.0
CMS3_k127_1167589_6 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000035 236.0
CMS3_k127_1167589_7 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000001555 127.0
CMS3_k127_1167589_8 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000006835 83.0
CMS3_k127_117766_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 318.0
CMS3_k127_117766_1 - - - - 0.0000000000001181 77.0
CMS3_k127_1199780_0 von Willebrand factor (vWF) type A domain - - - 1.978e-247 789.0
CMS3_k127_1199780_1 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 439.0
CMS3_k127_1199780_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 423.0
CMS3_k127_1199780_3 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004394 247.0
CMS3_k127_1199780_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000008891 202.0
CMS3_k127_1202689_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.03e-204 651.0
CMS3_k127_1202689_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.547e-195 612.0
CMS3_k127_1202689_2 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 291.0
CMS3_k127_1219260_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1002.0
CMS3_k127_1219260_1 Protein of unknown function (DUF2863) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 428.0
CMS3_k127_1219260_2 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 342.0
CMS3_k127_1219260_3 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000003579 159.0
CMS3_k127_1220515_0 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 420.0
CMS3_k127_1220515_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000746 248.0
CMS3_k127_1220515_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000003776 153.0
CMS3_k127_1250519_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 1.599e-301 945.0
CMS3_k127_1250519_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 602.0
CMS3_k127_1250519_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003391 274.0
CMS3_k127_1250519_11 RmuC family K09760 - - 0.000000000000000000000000000000000000000001285 161.0
CMS3_k127_1250519_2 polyphosphate kinase activity K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 422.0
CMS3_k127_1250519_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 411.0
CMS3_k127_1250519_4 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 355.0
CMS3_k127_1250519_5 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 340.0
CMS3_k127_1250519_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007571 316.0
CMS3_k127_1250519_7 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 306.0
CMS3_k127_1250519_8 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 332.0
CMS3_k127_1250519_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 308.0
CMS3_k127_1271793_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 348.0
CMS3_k127_1271793_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 308.0
CMS3_k127_1271793_2 Diguanylate cyclase - - - 0.00000000000000000000004221 111.0
CMS3_k127_1271793_3 diguanylate cyclase - - - 0.00000000000000006338 93.0
CMS3_k127_1271793_4 Membrane transport protein K07088 - - 0.00000000009036 62.0
CMS3_k127_1271793_5 - - - - 0.00001355 51.0
CMS3_k127_1272556_0 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 433.0
CMS3_k127_1272556_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 406.0
CMS3_k127_1272556_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 322.0
CMS3_k127_1272556_3 - - - - 0.000000000000000000000000000000000000000002489 162.0
CMS3_k127_1272556_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000192 106.0
CMS3_k127_1314459_0 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000001318 211.0
CMS3_k127_1314459_1 diguanylate cyclase - - - 0.00000000000000000000161 107.0
CMS3_k127_1329848_0 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 460.0
CMS3_k127_1329848_1 Membrane - - - 0.000000000000000000000000000000000000000002135 162.0
CMS3_k127_1329848_2 S4 RNA-binding domain - - - 0.000000000000000000000000000000002565 139.0
CMS3_k127_1329848_3 - - - - 0.000000000000000000000003063 116.0
CMS3_k127_1329848_4 Bacterial protein of unknown function (DUF882) - - - 0.000000000001018 81.0
CMS3_k127_1346785_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 396.0
CMS3_k127_1346785_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000106 239.0
CMS3_k127_1346785_2 Transporter major facilitator family protein - - - 0.000000008484 63.0
CMS3_k127_1459586_0 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.3e-213 670.0
CMS3_k127_1459586_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 503.0
CMS3_k127_1459586_10 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000009373 104.0
CMS3_k127_1459586_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 473.0
CMS3_k127_1459586_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 411.0
CMS3_k127_1459586_4 peptidase, S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 355.0
CMS3_k127_1459586_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 357.0
CMS3_k127_1459586_6 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000009834 218.0
CMS3_k127_1459586_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000007128 186.0
CMS3_k127_1459586_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000009051 138.0
CMS3_k127_1459586_9 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.0000000000000000000000000000000001371 138.0
CMS3_k127_1673415_0 methionine synthase K00548 - 2.1.1.13 2.899e-266 829.0
CMS3_k127_1673415_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 4.989e-238 744.0
CMS3_k127_1673415_10 protein conserved in bacteria K09806 - - 0.00000000000000000000000007647 109.0
CMS3_k127_1673415_11 Cytochrome P460 - - - 0.000000000000000000000004279 111.0
CMS3_k127_1673415_2 Glutamate-cysteine ligase K01919 - 6.3.2.2 1.727e-210 661.0
CMS3_k127_1673415_3 Ammonium Transporter K03320 - - 2.113e-209 659.0
CMS3_k127_1673415_4 (GGDEF) domain K21024 - 3.1.4.52 8.398e-196 651.0
CMS3_k127_1673415_5 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 426.0
CMS3_k127_1673415_6 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005181 239.0
CMS3_k127_1673415_7 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000002682 218.0
CMS3_k127_1673415_8 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000000001949 207.0
CMS3_k127_1673415_9 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000001669 158.0
CMS3_k127_1705343_0 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 606.0
CMS3_k127_1705343_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 446.0
CMS3_k127_1705343_2 PFAM Na H antiporter MnhB subunit-related protein K05566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 351.0
CMS3_k127_1705343_3 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000004473 239.0
CMS3_k127_1705343_4 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.00000000000000000000000000000000000000000000000000000001898 201.0
CMS3_k127_1705343_5 MarR family - - - 0.0000000000000000000000000000000000000000001728 169.0
CMS3_k127_1705343_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.000000000000000000000000000000000000000001285 161.0
CMS3_k127_1705343_7 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000008478 138.0
CMS3_k127_1705343_8 monovalent cation:proton antiporter activity K05571 - - 0.000000000000000000000000000003225 123.0
CMS3_k127_1705343_9 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000003154 116.0
CMS3_k127_1741080_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.255e-218 689.0
CMS3_k127_1741080_1 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 355.0
CMS3_k127_1741080_2 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003629 261.0
CMS3_k127_1741080_3 PFAM AMMECR1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000001134 225.0
CMS3_k127_1741080_4 - K09004 - - 0.0000000000000000000000000000000000000000000000001835 181.0
CMS3_k127_1741080_5 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000002995 132.0
CMS3_k127_1745999_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.519e-211 664.0
CMS3_k127_1745999_1 glycolate oxidase subunit GlcD - - - 2.489e-201 636.0
CMS3_k127_1745999_2 NiFe/NiFeSe hydrogenase small subunit C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 527.0
CMS3_k127_1745999_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 283.0
CMS3_k127_1745999_5 oxygen carrier activity K07216 - - 0.0000000000002669 75.0
CMS3_k127_1745999_6 cytochrome c biogenesis K02200 - - 0.00001677 57.0
CMS3_k127_1779204_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.379e-260 814.0
CMS3_k127_1779204_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 526.0
CMS3_k127_1779204_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003549 267.0
CMS3_k127_1779204_11 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003079 264.0
CMS3_k127_1779204_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000874 265.0
CMS3_k127_1779204_13 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006951 265.0
CMS3_k127_1779204_14 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000003332 199.0
CMS3_k127_1779204_15 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000002286 173.0
CMS3_k127_1779204_16 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000000000000000000002081 111.0
CMS3_k127_1779204_17 - - - - 0.000000000000000000000000002475 118.0
CMS3_k127_1779204_18 - - - - 0.000000000000000000000001953 108.0
CMS3_k127_1779204_19 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000004192 102.0
CMS3_k127_1779204_2 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 436.0
CMS3_k127_1779204_20 - - - - 0.000000000000000000000855 101.0
CMS3_k127_1779204_21 Short C-terminal domain K08982 - - 0.000000000000008603 80.0
CMS3_k127_1779204_22 COG2217 Cation transport ATPase K17686 - 3.6.3.54 0.00000000000001957 73.0
CMS3_k127_1779204_23 Protein of unknown function (DUF2933) - - - 0.00000000000003743 79.0
CMS3_k127_1779204_24 Copper-transporting ATPase 2 K17686 GO:0000041,GO:0000139,GO:0000166,GO:0002164,GO:0003674,GO:0003824,GO:0004008,GO:0005215,GO:0005375,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0005887,GO:0005911,GO:0005923,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006873,GO:0006874,GO:0006875,GO:0006878,GO:0006882,GO:0007275,GO:0007589,GO:0007591,GO:0007593,GO:0007595,GO:0007623,GO:0008144,GO:0008150,GO:0008270,GO:0008324,GO:0009719,GO:0009725,GO:0009791,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010043,GO:0010243,GO:0012505,GO:0014070,GO:0014074,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015677,GO:0015680,GO:0016020,GO:0016021,GO:0016323,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019725,GO:0019829,GO:0021700,GO:0022404,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030054,GO:0030554,GO:0030879,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032588,GO:0034220,GO:0035434,GO:0035639,GO:0036094,GO:0042221,GO:0042303,GO:0042335,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043296,GO:0043434,GO:0043473,GO:0043492,GO:0043682,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0046683,GO:0046688,GO:0046872,GO:0046873,GO:0046903,GO:0046907,GO:0046914,GO:0046915,GO:0046916,GO:0048066,GO:0048067,GO:0048085,GO:0048471,GO:0048511,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0048878,GO:0050801,GO:0050878,GO:0050896,GO:0051179,GO:0051208,GO:0051234,GO:0051235,GO:0051591,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055069,GO:0055070,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060003,GO:0065007,GO:0065008,GO:0070160,GO:0070887,GO:0071241,GO:0071248,GO:0071280,GO:0071287,GO:0071944,GO:0072503,GO:0072507,GO:0090662,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098805,GO:0099131,GO:0099132,GO:1901265,GO:1901363,GO:1901652,GO:1901698,GO:1901700,GO:1990637 3.6.3.54 0.00000000001651 66.0
CMS3_k127_1779204_27 Domain of unknown function (DUF4845) - - - 0.0000008746 52.0
CMS3_k127_1779204_28 NfeD-like C-terminal, partner-binding K07403 - - 0.0002323 49.0
CMS3_k127_1779204_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 395.0
CMS3_k127_1779204_4 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 377.0
CMS3_k127_1779204_5 COG0644 Dehydrogenases (flavoproteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 375.0
CMS3_k127_1779204_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 332.0
CMS3_k127_1779204_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 310.0
CMS3_k127_1779204_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
CMS3_k127_1779204_9 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 287.0
CMS3_k127_1818117_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1650.0
CMS3_k127_1818117_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 403.0
CMS3_k127_1818117_2 Nitrate reductase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 296.0
CMS3_k127_1818117_3 Histidine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000003209 207.0
CMS3_k127_1818117_4 Transcriptional regulatory protein, C terminal K02483,K07658 - - 0.000000000000000000000000000000000000000000000000000006826 201.0
CMS3_k127_1818117_5 Domain of unknown function (DUF309) - - - 0.000000000000000000000000000000000000000000000003895 177.0
CMS3_k127_1818117_6 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000002904 160.0
CMS3_k127_1818117_7 - - - - 0.0000000000000000000000000000000001755 136.0
CMS3_k127_1818117_8 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000007621 125.0
CMS3_k127_1839560_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 8.87e-272 848.0
CMS3_k127_1839560_1 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 580.0
CMS3_k127_1839560_2 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 432.0
CMS3_k127_1839560_3 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005013 273.0
CMS3_k127_1839560_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000146 152.0
CMS3_k127_1839560_5 GYD domain - - - 0.00000000000000000000000000000002978 132.0
CMS3_k127_1839560_6 Belongs to the peptidase S8 family - - - 0.00000002683 62.0
CMS3_k127_1898636_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1399.0
CMS3_k127_1898636_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 400.0
CMS3_k127_1898636_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 368.0
CMS3_k127_1898636_3 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 363.0
CMS3_k127_1898636_4 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007478 254.0
CMS3_k127_1898636_5 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000002737 252.0
CMS3_k127_1898636_6 - - - - 0.0000000000000000006868 93.0
CMS3_k127_1898636_7 - - - - 0.000001108 61.0
CMS3_k127_1934624_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1083.0
CMS3_k127_1934624_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 9.98e-267 847.0
CMS3_k127_1934624_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 401.0
CMS3_k127_1934624_3 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000002177 239.0
CMS3_k127_1934624_4 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.00000000000000000000000000000000000000000000000004709 187.0
CMS3_k127_1934624_5 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000001313 151.0
CMS3_k127_1934624_6 Peptidase family S49 K04773 - - 0.000000000000000000000000000002153 123.0
CMS3_k127_1935387_0 TonB-dependent Receptor Plug K02014 - - 8.472e-255 807.0
CMS3_k127_1935387_1 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 349.0
CMS3_k127_1935387_2 histidine kinase HAMP region domain protein K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 310.0
CMS3_k127_1935387_3 4Fe-4S dicluster domain K05796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 287.0
CMS3_k127_1935387_4 PFAM response regulator receiver K07689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001656 265.0
CMS3_k127_1935387_5 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001748 245.0
CMS3_k127_1935387_6 - - - - 0.000000000000000000000000005546 120.0
CMS3_k127_1935387_7 - - - - 0.000000000000000000000001935 113.0
CMS3_k127_1935387_8 TIGRFAM TonB family protein K03832 - - 0.0001268 44.0
CMS3_k127_1959_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 6.273e-274 859.0
CMS3_k127_1959_1 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 504.0
CMS3_k127_1959_2 Transcriptional regulator K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 460.0
CMS3_k127_1959_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 348.0
CMS3_k127_1959_4 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
CMS3_k127_1959_5 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000001289 168.0
CMS3_k127_1959_6 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000007345 72.0
CMS3_k127_1966221_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1047.0
CMS3_k127_1966221_1 chain 5 L K00341 - 1.6.5.3 6.79e-308 956.0
CMS3_k127_1966221_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000001078 169.0
CMS3_k127_1966221_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.504e-257 800.0
CMS3_k127_1966221_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.514e-244 760.0
CMS3_k127_1966221_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 4.758e-205 646.0
CMS3_k127_1966221_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 524.0
CMS3_k127_1966221_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 302.0
CMS3_k127_1966221_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 294.0
CMS3_k127_1966221_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000005469 268.0
CMS3_k127_1966221_9 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001086 246.0
CMS3_k127_1988627_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 1.948e-215 677.0
CMS3_k127_1988627_1 Glycine cleavage system P-protein K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 514.0
CMS3_k127_1988627_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007372 265.0
CMS3_k127_1988627_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000001234 184.0
CMS3_k127_1988627_4 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.000000000000000000000000000000000000000002208 157.0
CMS3_k127_2028595_0 Outer membrane protein beta-barrel family - - - 2.187e-286 900.0
CMS3_k127_2028595_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 414.0
CMS3_k127_2028595_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 289.0
CMS3_k127_2028595_3 Biopolymer transport protein K03559 - - 0.00000000000000000000000000000000000000000002741 164.0
CMS3_k127_2028595_4 Muconolactone delta-isomerase K03464 - 5.3.3.4 0.000000000000000000000000000000000000001067 153.0
CMS3_k127_2028595_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000005904 147.0
CMS3_k127_2028595_6 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000003847 141.0
CMS3_k127_2031599_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1024.0
CMS3_k127_2031599_1 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 407.0
CMS3_k127_2031599_2 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 355.0
CMS3_k127_2031599_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000522 251.0
CMS3_k127_2031599_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000001413 236.0
CMS3_k127_2031599_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000008957 221.0
CMS3_k127_2031599_6 ATP synthase I chain K02116 - - 0.00000000000000000000008478 102.0
CMS3_k127_2050788_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 3.895e-320 998.0
CMS3_k127_2050788_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 7.076e-320 1000.0
CMS3_k127_2050788_10 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000001646 227.0
CMS3_k127_2050788_11 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000008425 194.0
CMS3_k127_2050788_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000002955 157.0
CMS3_k127_2050788_13 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000002665 115.0
CMS3_k127_2050788_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000000001898 68.0
CMS3_k127_2050788_2 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 409.0
CMS3_k127_2050788_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 404.0
CMS3_k127_2050788_4 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 394.0
CMS3_k127_2050788_5 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 378.0
CMS3_k127_2050788_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 323.0
CMS3_k127_2050788_7 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 309.0
CMS3_k127_2050788_8 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007604 273.0
CMS3_k127_2050788_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000001842 267.0
CMS3_k127_2066135_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 1.199e-253 790.0
CMS3_k127_2066135_1 Male sterility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 332.0
CMS3_k127_2066135_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000009206 178.0
CMS3_k127_2066135_3 PGAP1-like protein - - - 0.0000000000000000000000000000000000000003754 164.0
CMS3_k127_2076093_0 Flavin containing amine oxidoreductase K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 392.0
CMS3_k127_2076093_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 372.0
CMS3_k127_2076093_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000399 282.0
CMS3_k127_2076093_3 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000007076 230.0
CMS3_k127_2076093_4 Complex I intermediate-associated protein 30 - - - 0.00000000000000000000000000000000000000000846 162.0
CMS3_k127_2076093_5 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000006084 127.0
CMS3_k127_2076093_6 Domain of unknown function (DUF1840) - - - 0.0000000000000000000421 95.0
CMS3_k127_2089421_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2451.0
CMS3_k127_2089421_1 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1015.0
CMS3_k127_2089421_10 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000000000000000000000000000000000002199 215.0
CMS3_k127_2089421_11 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000002224 189.0
CMS3_k127_2089421_12 pilus assembly protein PilP K02665 - - 0.00000000000000000000000000000000000000000000009371 174.0
CMS3_k127_2089421_13 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000007555 141.0
CMS3_k127_2089421_2 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.725e-236 740.0
CMS3_k127_2089421_3 type IV pilus secretin PilQ K02666 - - 1.364e-231 738.0
CMS3_k127_2089421_4 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 554.0
CMS3_k127_2089421_5 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 533.0
CMS3_k127_2089421_6 Type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 526.0
CMS3_k127_2089421_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 500.0
CMS3_k127_2089421_8 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002737 252.0
CMS3_k127_2089421_9 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000009464 220.0
CMS3_k127_2091998_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.4e-223 713.0
CMS3_k127_2091998_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002221 282.0
CMS3_k127_2091998_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000002177 180.0
CMS3_k127_2099069_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.323e-241 760.0
CMS3_k127_2099069_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 601.0
CMS3_k127_2099069_10 PFAM transport-associated - - - 0.00000000000000000000000000000000000000008066 156.0
CMS3_k127_2099069_11 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000003086 144.0
CMS3_k127_2099069_12 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000000002701 114.0
CMS3_k127_2099069_2 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 507.0
CMS3_k127_2099069_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 441.0
CMS3_k127_2099069_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 374.0
CMS3_k127_2099069_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 310.0
CMS3_k127_2099069_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 311.0
CMS3_k127_2099069_7 LppC putative lipoprotein K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006865 271.0
CMS3_k127_2099069_8 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008689 248.0
CMS3_k127_2099069_9 - - - - 0.0000000000000000000000000000000000000000000000000001519 190.0
CMS3_k127_2099295_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 561.0
CMS3_k127_2099295_1 His Kinase A (phosphoacceptor) domain K19661 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 544.0
CMS3_k127_2099295_10 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000004896 139.0
CMS3_k127_2099295_11 - - - - 0.00000000000000008135 84.0
CMS3_k127_2099295_12 - - - - 0.0000000000001582 78.0
CMS3_k127_2099295_13 - - - - 0.000000002085 61.0
CMS3_k127_2099295_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 458.0
CMS3_k127_2099295_3 High-affinity nickel-transport protein K07241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 352.0
CMS3_k127_2099295_4 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 361.0
CMS3_k127_2099295_5 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 370.0
CMS3_k127_2099295_6 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003009 295.0
CMS3_k127_2099295_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008963 240.0
CMS3_k127_2099295_8 Transcriptional regulator K07722 - - 0.0000000000000000000000000000000000000000000000000000000003592 205.0
CMS3_k127_2099295_9 lipid catabolic process - - - 0.000000000000000000000000000000000000000000000003118 189.0
CMS3_k127_2119614_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.056e-264 819.0
CMS3_k127_2119614_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.535e-217 683.0
CMS3_k127_2119614_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 8.757e-202 645.0
CMS3_k127_2119614_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 391.0
CMS3_k127_2119614_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 377.0
CMS3_k127_2119614_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000000006615 192.0
CMS3_k127_2120391_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 344.0
CMS3_k127_2120391_1 response regulator receiver K13041 - - 0.00000000000000000000000000000000000000000000000000000005909 205.0
CMS3_k127_2120391_2 His Kinase A (phosphoacceptor) domain K11711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000715 194.0
CMS3_k127_2120391_3 PFAM Cytochrome c assembly protein - - - 0.0000000007539 64.0
CMS3_k127_2122331_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 4.311e-250 777.0
CMS3_k127_2122331_1 ribonuclease II K01147 - 3.1.13.1 5.577e-246 773.0
CMS3_k127_2122331_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000008325 171.0
CMS3_k127_2122331_11 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000002323 117.0
CMS3_k127_2122331_12 Protein of unknown function (DUF2892) - - - 0.00000000000000000000008889 100.0
CMS3_k127_2122331_13 - - - - 0.000000000000000000001409 98.0
CMS3_k127_2122331_2 Sodium:solute symporter family K14393 - - 5.575e-234 730.0
CMS3_k127_2122331_3 Acts as a magnesium transporter K06213 - - 4.401e-216 683.0
CMS3_k127_2122331_4 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 548.0
CMS3_k127_2122331_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 348.0
CMS3_k127_2122331_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 338.0
CMS3_k127_2122331_7 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 309.0
CMS3_k127_2122331_8 TIGRFAM TonB family protein K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 291.0
CMS3_k127_2122331_9 esterase K07000 - - 0.000000000000000000000000000000000000000000000000000001717 197.0
CMS3_k127_2130010_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.5e-323 999.0
CMS3_k127_2130010_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 2.781e-196 623.0
CMS3_k127_2130010_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 517.0
CMS3_k127_2130010_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 452.0
CMS3_k127_2130010_4 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 437.0
CMS3_k127_2130010_5 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 381.0
CMS3_k127_2146653_0 Helicase K03722 - 3.6.4.12 1.452e-271 857.0
CMS3_k127_2146653_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.878e-218 685.0
CMS3_k127_2146653_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006613 263.0
CMS3_k127_2146653_3 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009287 251.0
CMS3_k127_2146653_4 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000119 145.0
CMS3_k127_2146653_5 Phasin protein - - - 0.00000000000000000000000000000000005153 140.0
CMS3_k127_2146653_6 - - - - 0.0000000000000000000000000000000002203 138.0
CMS3_k127_2146653_7 Universal stress protein family - - - 0.000000000000000000000003137 111.0
CMS3_k127_2174609_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1373.0
CMS3_k127_2174609_1 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 3.515e-244 765.0
CMS3_k127_2174609_10 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 442.0
CMS3_k127_2174609_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 453.0
CMS3_k127_2174609_12 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 404.0
CMS3_k127_2174609_13 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 407.0
CMS3_k127_2174609_14 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 391.0
CMS3_k127_2174609_15 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 373.0
CMS3_k127_2174609_16 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 364.0
CMS3_k127_2174609_17 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 362.0
CMS3_k127_2174609_18 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 346.0
CMS3_k127_2174609_19 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000001003 207.0
CMS3_k127_2174609_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.557e-215 673.0
CMS3_k127_2174609_20 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000004881 204.0
CMS3_k127_2174609_21 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000001857 86.0
CMS3_k127_2174609_22 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000009444 81.0
CMS3_k127_2174609_23 Protein of unknown function (DUF721) - - - 0.000000000005772 75.0
CMS3_k127_2174609_24 - - - - 0.0005538 45.0
CMS3_k127_2174609_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.131e-207 665.0
CMS3_k127_2174609_4 PFAM type II secretion system K02653 - - 4.979e-198 624.0
CMS3_k127_2174609_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 7.374e-197 621.0
CMS3_k127_2174609_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 571.0
CMS3_k127_2174609_7 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 562.0
CMS3_k127_2174609_8 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 556.0
CMS3_k127_2174609_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 484.0
CMS3_k127_2180010_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.082e-251 782.0
CMS3_k127_2180010_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 3.152e-207 649.0
CMS3_k127_2180010_10 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000009107 203.0
CMS3_k127_2180010_11 - - - - 0.000000000005268 69.0
CMS3_k127_2180010_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 580.0
CMS3_k127_2180010_3 Nucleoside H+ symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 477.0
CMS3_k127_2180010_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 468.0
CMS3_k127_2180010_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 449.0
CMS3_k127_2180010_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 368.0
CMS3_k127_2180010_7 Protein of unknown function (DUF560) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 355.0
CMS3_k127_2180010_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 329.0
CMS3_k127_2180010_9 PFAM FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002362 256.0
CMS3_k127_2190843_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 8.748e-304 939.0
CMS3_k127_2190843_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 548.0
CMS3_k127_2190843_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 514.0
CMS3_k127_2190843_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 483.0
CMS3_k127_2190843_4 Bifunctional protein K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 432.0
CMS3_k127_2190843_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 302.0
CMS3_k127_2190843_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000003981 162.0
CMS3_k127_2190843_7 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000000000000001611 83.0
CMS3_k127_2190843_8 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000001673 63.0
CMS3_k127_2190843_9 Protein conserved in bacteria - - - 0.00000499 57.0
CMS3_k127_2210425_0 Histidine kinase - - - 2.513e-246 786.0
CMS3_k127_2210425_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 490.0
CMS3_k127_2210425_10 - - - - 0.000000000000000002549 99.0
CMS3_k127_2210425_11 Esterase, phb depolymerase family - - - 0.000000000001516 67.0
CMS3_k127_2210425_12 - - - - 0.00000000001179 71.0
CMS3_k127_2210425_2 belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 360.0
CMS3_k127_2210425_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009865 298.0
CMS3_k127_2210425_4 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 294.0
CMS3_k127_2210425_5 response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000003559 220.0
CMS3_k127_2210425_6 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000000000000007893 186.0
CMS3_k127_2210425_7 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000001682 190.0
CMS3_k127_2210425_8 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000000000003216 177.0
CMS3_k127_2210425_9 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000005942 98.0
CMS3_k127_2232935_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 585.0
CMS3_k127_2232935_1 Phosphate transport system permease protein K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 473.0
CMS3_k127_2232935_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 441.0
CMS3_k127_2232935_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 422.0
CMS3_k127_2232935_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 348.0
CMS3_k127_2232935_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 326.0
CMS3_k127_2232935_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 286.0
CMS3_k127_2232935_7 PFAM extracellular solute-binding protein family 1 K02040 - - 0.000000000000000000000000000000000000008327 146.0
CMS3_k127_2232935_8 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000005056 121.0
CMS3_k127_2232935_9 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K03940 - 1.6.5.3,1.6.99.3 0.0000002191 54.0
CMS3_k127_2239497_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 2.059e-285 884.0
CMS3_k127_2239497_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 491.0
CMS3_k127_2239497_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005644 244.0
CMS3_k127_2239497_3 Tetratricopeptide repeats - - - 0.00000000000007886 72.0
CMS3_k127_2239625_0 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 359.0
CMS3_k127_2239625_1 PFAM NapC NirT cytochrome c K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003732 256.0
CMS3_k127_2239625_2 Belongs to the Nudix hydrolase family K01518 - 3.6.1.17 0.00000000000000000000000000000000000000000000002951 179.0
CMS3_k127_2239625_4 PFAM PASTA domain - - - 0.0000000000000000001152 102.0
CMS3_k127_2267818_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 4.229e-262 812.0
CMS3_k127_2267818_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001473 245.0
CMS3_k127_2267818_2 PFAM ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000205 192.0
CMS3_k127_2267818_3 Domain of unknown function (DUF4124) - - - 0.000000000000000000002875 100.0
CMS3_k127_2267818_4 - - - - 0.00000000000001085 81.0
CMS3_k127_2316287_0 amino acid K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 410.0
CMS3_k127_2316287_1 Branched-chain amino acid transport system permease K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 423.0
CMS3_k127_2316287_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 389.0
CMS3_k127_2316287_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 379.0
CMS3_k127_2316287_4 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000000000000000005066 125.0
CMS3_k127_2316287_5 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000006295 84.0
CMS3_k127_2320068_0 Malic enzyme K00029 - 1.1.1.40 0.0 1061.0
CMS3_k127_2320068_1 DNA polymerase X family K02347 - - 4.11e-250 782.0
CMS3_k127_2320068_10 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 431.0
CMS3_k127_2320068_11 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 423.0
CMS3_k127_2320068_12 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 369.0
CMS3_k127_2320068_13 response regulator K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 314.0
CMS3_k127_2320068_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000831 314.0
CMS3_k127_2320068_15 helix_turn_helix, Lux Regulon K11712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004489 249.0
CMS3_k127_2320068_16 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000003702 205.0
CMS3_k127_2320068_17 HNH nucleases - - - 0.0000000000000000000000000000000000000000000007103 169.0
CMS3_k127_2320068_18 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000004092 151.0
CMS3_k127_2320068_19 - - - - 0.00000000000000000000000003071 122.0
CMS3_k127_2320068_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00382 - 1.8.1.4 7.206e-201 636.0
CMS3_k127_2320068_20 Iron-sulphur cluster biosynthesis K13628 - - 0.00000000000000000000000006828 114.0
CMS3_k127_2320068_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 618.0
CMS3_k127_2320068_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 530.0
CMS3_k127_2320068_5 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 533.0
CMS3_k127_2320068_6 associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 527.0
CMS3_k127_2320068_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 520.0
CMS3_k127_2320068_8 Putative metallopeptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 503.0
CMS3_k127_2320068_9 His Kinase A (phosphoacceptor) domain K11711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 458.0
CMS3_k127_2362588_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1931.0
CMS3_k127_2362588_1 FeS assembly protein SufB K09014 - - 1.191e-276 855.0
CMS3_k127_2362588_10 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000007992 147.0
CMS3_k127_2362588_11 metal-sulfur cluster biosynthetic enzyme K02612 - - 0.0000000000000000000000000000000000009155 149.0
CMS3_k127_2362588_12 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.000000000000000000000000000000000002928 145.0
CMS3_k127_2362588_13 Cytochrome P460 - - - 0.000000000000000000000000009599 120.0
CMS3_k127_2362588_14 cytochrome - - - 0.00000000000000000004282 100.0
CMS3_k127_2362588_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 574.0
CMS3_k127_2362588_3 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 480.0
CMS3_k127_2362588_4 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 393.0
CMS3_k127_2362588_5 asparaginase K01424,K13051 GO:0003674,GO:0003824,GO:0004067,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008798,GO:0010467,GO:0016485,GO:0016540,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.19.5,3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 291.0
CMS3_k127_2362588_6 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008407 242.0
CMS3_k127_2362588_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000698 211.0
CMS3_k127_2362588_8 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000000000002178 203.0
CMS3_k127_2362588_9 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000001244 203.0
CMS3_k127_2363680_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 445.0
CMS3_k127_2363680_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001029 289.0
CMS3_k127_2363680_2 Domain of unknown function (DUF4124) - - - 0.000005201 55.0
CMS3_k127_236616_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 1.857e-279 865.0
CMS3_k127_236616_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 530.0
CMS3_k127_236616_2 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 443.0
CMS3_k127_236616_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 385.0
CMS3_k127_236616_4 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000000000000002766 145.0
CMS3_k127_2420786_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 4.023e-229 721.0
CMS3_k127_2420786_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 522.0
CMS3_k127_2420786_10 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000001433 102.0
CMS3_k127_2420786_11 - - - - 0.000000000000000000001268 102.0
CMS3_k127_2420786_12 - - - - 0.00000000000000000001024 93.0
CMS3_k127_2420786_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 407.0
CMS3_k127_2420786_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 386.0
CMS3_k127_2420786_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 356.0
CMS3_k127_2420786_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 320.0
CMS3_k127_2420786_6 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 287.0
CMS3_k127_2420786_7 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004981 267.0
CMS3_k127_2420786_8 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000003095 216.0
CMS3_k127_2420786_9 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000367 176.0
CMS3_k127_2488997_0 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 601.0
CMS3_k127_2488997_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 563.0
CMS3_k127_2488997_10 TolA C-terminal K03646 - - 0.0000000000000000000000000000000000000000003192 171.0
CMS3_k127_2488997_11 Pfam Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000004961 87.0
CMS3_k127_2488997_12 (ABC) transporter - - - 0.00000000000003508 81.0
CMS3_k127_2488997_2 Amidohydrolase K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 477.0
CMS3_k127_2488997_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 421.0
CMS3_k127_2488997_4 Sigma-54 interaction domain K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 370.0
CMS3_k127_2488997_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 324.0
CMS3_k127_2488997_6 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 325.0
CMS3_k127_2488997_7 HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002599 248.0
CMS3_k127_2488997_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000003233 223.0
CMS3_k127_2488997_9 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000223 191.0
CMS3_k127_2493610_0 Protein of unknown function - - - 0.0 1109.0
CMS3_k127_2493610_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1024.0
CMS3_k127_2493610_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain II K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 1.256e-230 722.0
CMS3_k127_2493610_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 524.0
CMS3_k127_2493610_4 heptosyltransferase II K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 415.0
CMS3_k127_2493610_5 PFAM alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 408.0
CMS3_k127_2493610_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 330.0
CMS3_k127_2493610_7 Zinc-finger domain - - - 0.000000000000000000000000000002231 120.0
CMS3_k127_2493610_8 SnoaL-like domain - - - 0.00000000000000000000000002878 113.0
CMS3_k127_2493610_9 Protein of unknown function (DUF2442) - - - 0.000000002085 61.0
CMS3_k127_2612165_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 8.923e-237 740.0
CMS3_k127_2612165_1 AMP-binding enzyme K01895 - 6.2.1.1 5.899e-234 735.0
CMS3_k127_2612165_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005713 265.0
CMS3_k127_2612165_11 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000005869 231.0
CMS3_k127_2612165_12 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000000002026 180.0
CMS3_k127_2612165_13 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000007399 169.0
CMS3_k127_2612165_14 MaoC like domain - - - 0.00000000000000000000000000000000000000000009561 165.0
CMS3_k127_2612165_15 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000004817 145.0
CMS3_k127_2612165_16 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000002231 137.0
CMS3_k127_2612165_17 Late embryogenesis abundant protein - - - 0.00000000000000000000000001808 115.0
CMS3_k127_2612165_18 - - - - 0.0000000000000000000001017 97.0
CMS3_k127_2612165_19 KTSC domain - - - 0.00000000000000001217 84.0
CMS3_k127_2612165_2 PFAM Aminoacyl-tRNA synthetase, class Ib K01867 - 6.1.1.2 1.266e-225 704.0
CMS3_k127_2612165_3 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 358.0
CMS3_k127_2612165_4 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 337.0
CMS3_k127_2612165_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 338.0
CMS3_k127_2612165_6 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 332.0
CMS3_k127_2612165_7 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 317.0
CMS3_k127_2612165_8 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 303.0
CMS3_k127_2612165_9 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 295.0
CMS3_k127_2618962_0 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 550.0
CMS3_k127_2618962_1 Transcriptional regulator, LysR family K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 409.0
CMS3_k127_2618962_2 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 389.0
CMS3_k127_2618962_3 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 385.0
CMS3_k127_2618962_4 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006641 262.0
CMS3_k127_2618962_5 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003661 244.0
CMS3_k127_2618962_6 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000000000006376 195.0
CMS3_k127_2618962_7 Nitrous oxide-stimulated promoter - - - 0.00000000000000000000000000000000348 133.0
CMS3_k127_2618962_8 ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000006396 135.0
CMS3_k127_2618962_9 rubredoxin - GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 - 0.0000000000000000000000000004418 113.0
CMS3_k127_2656259_0 GGDEF domain - - - 3.052e-231 769.0
CMS3_k127_2656259_1 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 361.0
CMS3_k127_2656259_2 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 346.0
CMS3_k127_2656259_3 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000423 176.0
CMS3_k127_2656259_4 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000001557 139.0
CMS3_k127_2656259_5 - - - - 0.000000000000000003612 88.0
CMS3_k127_2656259_7 - - - - 0.000009638 51.0
CMS3_k127_2665675_0 TRAP dicarboxylate transporter, DctM subunit K11690 - - 7.086e-217 680.0
CMS3_k127_2665675_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.014e-206 650.0
CMS3_k127_2665675_10 Type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000000000000000002264 224.0
CMS3_k127_2665675_11 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000002669 212.0
CMS3_k127_2665675_12 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000195 213.0
CMS3_k127_2665675_13 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000000000000002454 169.0
CMS3_k127_2665675_14 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000001507 142.0
CMS3_k127_2665675_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 621.0
CMS3_k127_2665675_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 603.0
CMS3_k127_2665675_4 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 522.0
CMS3_k127_2665675_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 517.0
CMS3_k127_2665675_6 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 503.0
CMS3_k127_2665675_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 411.0
CMS3_k127_2665675_8 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003483 246.0
CMS3_k127_2665675_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000158 235.0
CMS3_k127_2690582_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1236.0
CMS3_k127_2690582_1 Belongs to the GPI family K01810 - 5.3.1.9 6.455e-273 847.0
CMS3_k127_2690582_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 445.0
CMS3_k127_2690582_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 431.0
CMS3_k127_2690582_4 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 383.0
CMS3_k127_2690582_5 Protein of unknown function (DUF3302) - - - 0.000000000000000000000000000000000000000002607 162.0
CMS3_k127_2690582_6 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000002716 114.0
CMS3_k127_2690582_7 Outer membrane protein transport protein, Ompp1 FadL TodX K06076 - - 0.000000000003 77.0
CMS3_k127_2690582_8 - - - - 0.000002343 51.0
CMS3_k127_2690582_9 Belongs to the 'phage' integrase family - - - 0.000003356 51.0
CMS3_k127_2704166_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 587.0
CMS3_k127_2704166_1 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004409 274.0
CMS3_k127_2704166_2 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001796 263.0
CMS3_k127_2704166_3 cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000006607 249.0
CMS3_k127_2704166_4 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000001418 246.0
CMS3_k127_2704166_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001773 222.0
CMS3_k127_2704166_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000009265 163.0
CMS3_k127_2720998_0 Signal transduction histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 332.0
CMS3_k127_2720998_1 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 317.0
CMS3_k127_2720998_2 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 297.0
CMS3_k127_2720998_3 PFAM response regulator receiver K15012 - - 0.000000000000000000000000000000000000000000000000000000000002103 220.0
CMS3_k127_2738710_0 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 527.0
CMS3_k127_2738710_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000001336 259.0
CMS3_k127_2738710_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000009991 166.0
CMS3_k127_2738710_3 Auxin binding protein - - - 0.000000000000000000000000000000000000002087 152.0
CMS3_k127_2738710_4 PFAM SMP-30 Gluconolaconase K21449 - - 0.0000000000000000000000000000000002664 151.0
CMS3_k127_274183_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 572.0
CMS3_k127_274183_1 Mandelate Racemase Muconate Lactonizing K01781,K20023,K20549 - 4.2.1.156,4.2.1.42,5.1.2.2,5.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 521.0
CMS3_k127_274183_10 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000002181 205.0
CMS3_k127_274183_11 - - - - 0.000000000000000000000000000000000000000000000000000001039 198.0
CMS3_k127_274183_12 FixH K09926 - - 0.000000000000000000000000000000000000000000000002644 178.0
CMS3_k127_274183_13 - - - - 0.0000000000000000000000004479 107.0
CMS3_k127_274183_14 - - - - 0.000000004794 64.0
CMS3_k127_274183_2 Competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 501.0
CMS3_k127_274183_3 cytochrome C oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 446.0
CMS3_k127_274183_4 nitric oxide reductase activity K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 404.0
CMS3_k127_274183_5 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 336.0
CMS3_k127_274183_6 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 325.0
CMS3_k127_274183_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001234 260.0
CMS3_k127_274183_8 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000363 239.0
CMS3_k127_274183_9 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000204 225.0
CMS3_k127_276262_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1069.0
CMS3_k127_276262_1 Nadh flavin oxidoreductase nadh oxidase K10680 GO:0000003,GO:0000302,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006950,GO:0006979,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009605,GO:0009607,GO:0009620,GO:0009694,GO:0009695,GO:0009791,GO:0009908,GO:0009987,GO:0010035,GO:0010193,GO:0010817,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016629,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0042221,GO:0042445,GO:0042446,GO:0042493,GO:0042579,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046677,GO:0048367,GO:0048437,GO:0048438,GO:0048443,GO:0048466,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0051704,GO:0051707,GO:0055114,GO:0061458,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0090567,GO:0099402,GO:1901576,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 517.0
CMS3_k127_276262_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000002862 181.0
CMS3_k127_276262_11 Small Multidrug Resistance protein K11741 - - 0.0000000000000000000000000000004768 136.0
CMS3_k127_276262_12 - - - - 0.0000000002512 63.0
CMS3_k127_276262_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 413.0
CMS3_k127_276262_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 343.0
CMS3_k127_276262_4 molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 308.0
CMS3_k127_276262_5 Putative heavy-metal chelation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 295.0
CMS3_k127_276262_6 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003357 274.0
CMS3_k127_276262_7 cyclopropane-fatty-acyl-phospholipid synthase K16868 - 2.1.1.265 0.0000000000000000000000000000000000000000000000000000000000005623 216.0
CMS3_k127_276262_8 - - - - 0.000000000000000000000000000000000000000000000000000000000001241 225.0
CMS3_k127_276262_9 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000001698 181.0
CMS3_k127_2776329_0 dna polymerase iii K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003355 283.0
CMS3_k127_2776329_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006733 275.0
CMS3_k127_2776329_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001007 254.0
CMS3_k127_2874040_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1043.0
CMS3_k127_2874040_1 Polyphosphate kinase 2 (PPK2) - - - 1.153e-215 687.0
CMS3_k127_2874040_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 608.0
CMS3_k127_2874040_3 CHAD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 394.0
CMS3_k127_2874040_4 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 377.0
CMS3_k127_2874040_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 360.0
CMS3_k127_2874040_6 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000009347 232.0
CMS3_k127_2874040_7 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000000000000000000004813 188.0
CMS3_k127_2874040_8 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000765 89.0
CMS3_k127_2885158_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 440.0
CMS3_k127_2885158_1 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 344.0
CMS3_k127_2885158_2 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006491 262.0
CMS3_k127_2885158_3 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000000000000000000000000000000007343 238.0
CMS3_k127_2885158_4 signal sequence binding - - - 0.000000000000000000000000000000000000000000001161 171.0
CMS3_k127_2886421_0 PFAM Glycoside hydrolase family 65, central catalytic - - - 0.0 1040.0
CMS3_k127_2886421_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 561.0
CMS3_k127_2886421_10 Domain of unknown function (DUF4936) - - - 0.00000000001988 70.0
CMS3_k127_2886421_11 - - - - 0.0000004996 60.0
CMS3_k127_2886421_2 Aminotransferase class I and II K00832 - 2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 540.0
CMS3_k127_2886421_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 504.0
CMS3_k127_2886421_4 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 463.0
CMS3_k127_2886421_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 462.0
CMS3_k127_2886421_6 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 383.0
CMS3_k127_2886421_7 PFAM Metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008283 241.0
CMS3_k127_2905243_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 526.0
CMS3_k127_2905243_1 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 408.0
CMS3_k127_2905243_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 345.0
CMS3_k127_2905243_3 Part of a membrane complex involved in electron transport K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 341.0
CMS3_k127_2905243_4 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 314.0
CMS3_k127_2905243_5 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005001 244.0
CMS3_k127_2905243_6 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000000000000000000002682 234.0
CMS3_k127_2905243_7 RNA recognition motif - - - 0.00000000000000000000000000001974 120.0
CMS3_k127_2912889_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1022.0
CMS3_k127_2912889_1 Protein of unknown function, DUF255 K06888 - - 7.7e-257 805.0
CMS3_k127_2912889_10 SMART serine threonine protein kinase - - - 0.0000107 55.0
CMS3_k127_2912889_11 Phosphotransferase enzyme family - - - 0.0000203 57.0
CMS3_k127_2912889_12 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0004845 45.0
CMS3_k127_2912889_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 411.0
CMS3_k127_2912889_3 Glycine cleavage system K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002072 254.0
CMS3_k127_2912889_4 - - - - 0.000000000000000000000000000000000000000000000002492 186.0
CMS3_k127_2912889_5 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000001489 190.0
CMS3_k127_2912889_6 AsmA family K07290 - - 0.0000000000000000000000000000000000000005748 173.0
CMS3_k127_2912889_7 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000006661 162.0
CMS3_k127_2912889_8 PFAM Phosphoglycerate mutase K22305 - 3.1.3.3 0.000000000000000000000001963 110.0
CMS3_k127_2912889_9 Phosphotransferase enzyme family - - - 0.0000000000000000008515 100.0
CMS3_k127_2938362_0 PQQ-like domain K00114 - 1.1.2.8 2.818e-282 877.0
CMS3_k127_2938362_1 COG0491 Zn-dependent hydrolases, including glyoxylases K01138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 360.0
CMS3_k127_2938362_2 Sulphur oxidation protein SoxZ K17226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 288.0
CMS3_k127_2938362_3 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000001073 114.0
CMS3_k127_2938362_4 histidine kinase HAMP region domain protein K07675 - 2.7.13.3 0.0000003943 54.0
CMS3_k127_2943788_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 8.509e-226 714.0
CMS3_k127_2943788_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.603e-221 692.0
CMS3_k127_2943788_10 - - - - 0.00000000000000000000000000000001029 134.0
CMS3_k127_2943788_11 Universal stress protein family - - - 0.00000000000000000000001626 104.0
CMS3_k127_2943788_12 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000002967 97.0
CMS3_k127_2943788_13 - - - - 0.000007589 59.0
CMS3_k127_2943788_14 Glucose / Sorbosone dehydrogenase - - - 0.00012 55.0
CMS3_k127_2943788_2 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 498.0
CMS3_k127_2943788_3 glycosyl - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 377.0
CMS3_k127_2943788_4 PFAM NADH Ubiquinone K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 366.0
CMS3_k127_2943788_5 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 363.0
CMS3_k127_2943788_6 Phospholipid-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 312.0
CMS3_k127_2943788_7 CoA-binding protein K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000002018 239.0
CMS3_k127_2943788_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002931 234.0
CMS3_k127_2943788_9 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000353 204.0
CMS3_k127_2990079_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 426.0
CMS3_k127_2990079_1 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004033 271.0
CMS3_k127_2990079_2 Protein of unknown function DUF99 K09120 - - 0.000000000000000000000000000000000000000000000000000000000000000009782 241.0
CMS3_k127_2990079_3 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000002308 146.0
CMS3_k127_2990079_4 3-demethylubiquinone-9 3-O-methyltransferase activity K20444 - - 0.0000000000000000003881 96.0
CMS3_k127_2990079_5 oligosaccharyl transferase activity - - - 0.000000000000000001697 100.0
CMS3_k127_3000998_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 3.066e-286 899.0
CMS3_k127_3000998_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.069e-235 735.0
CMS3_k127_3000998_10 - - - - 0.000000000000000000000000000002831 126.0
CMS3_k127_3000998_11 Rubrerythrin K03594 - 1.16.3.1 0.000000008726 57.0
CMS3_k127_3000998_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 3.601e-195 624.0
CMS3_k127_3000998_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 523.0
CMS3_k127_3000998_4 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 317.0
CMS3_k127_3000998_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 326.0
CMS3_k127_3000998_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000005512 161.0
CMS3_k127_3000998_7 rod shape-determining protein MreD K03571 - - 0.00000000000000000000000000000000000000001437 159.0
CMS3_k127_3000998_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000007902 148.0
CMS3_k127_3000998_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000001876 128.0
CMS3_k127_3018562_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 539.0
CMS3_k127_3018562_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 425.0
CMS3_k127_3018562_10 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.0000000000000000000000000000000000000001185 152.0
CMS3_k127_3018562_11 NusG domain II - - - 0.0000000000000007402 81.0
CMS3_k127_3018562_2 a g-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 402.0
CMS3_k127_3018562_3 P-loop ATPase protein family K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 366.0
CMS3_k127_3018562_4 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 343.0
CMS3_k127_3018562_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 313.0
CMS3_k127_3018562_6 AsmA family K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 299.0
CMS3_k127_3018562_7 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000000000000000000000000000000000000003104 230.0
CMS3_k127_3018562_8 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000000000000000000000000000000000000000000000000000541 219.0
CMS3_k127_3018562_9 peptidase S16 K07157 - - 0.00000000000000000000000000000000000000000000000000000005068 202.0
CMS3_k127_3046069_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 2.433e-206 665.0
CMS3_k127_3046069_1 III protein, CoA-transferase family K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 572.0
CMS3_k127_3046069_2 Periplasmic sensor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 570.0
CMS3_k127_3046069_3 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 374.0
CMS3_k127_3046069_4 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000002855 115.0
CMS3_k127_3057076_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 1.533e-195 618.0
CMS3_k127_3057076_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 353.0
CMS3_k127_3057076_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009499 251.0
CMS3_k127_3057076_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005102 246.0
CMS3_k127_3057076_4 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000001638 201.0
CMS3_k127_3057076_5 - - - - 0.0000000000000000000000000000000000009439 141.0
CMS3_k127_3057076_6 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000003791 93.0
CMS3_k127_3057076_7 DSBA-like thioredoxin domain K07396 - - 0.0002152 45.0
CMS3_k127_3059495_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218,K17229 - 1.8.2.3,1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 514.0
CMS3_k127_3059495_1 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 419.0
CMS3_k127_3059495_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 299.0
CMS3_k127_3059495_3 Pfam cytochrome c K17230 - - 0.000000000000000000000000000000000000002347 158.0
CMS3_k127_3059495_4 Protein of unknown function (DUF1223) - - - 0.00000000000000001841 83.0
CMS3_k127_3071339_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 1.563e-211 666.0
CMS3_k127_3071339_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 560.0
CMS3_k127_3071339_2 PGAP1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 449.0
CMS3_k127_3071339_3 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004953 291.0
CMS3_k127_3071339_5 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000001636 127.0
CMS3_k127_3071339_6 Cold-shock DNA-binding domain protein K03704 - - 0.00000000000002722 80.0
CMS3_k127_3088010_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.247e-290 912.0
CMS3_k127_3088010_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.097e-285 885.0
CMS3_k127_3088010_10 Pfam cytochrome c - - - 0.0000000000000000000000002929 116.0
CMS3_k127_3088010_11 membrane - - - 0.00000000000000000000005169 101.0
CMS3_k127_3088010_12 - - - - 0.000000000000000000000388 105.0
CMS3_k127_3088010_13 membrane - - - 0.00000000000000000000269 98.0
CMS3_k127_3088010_2 Glucose / Sorbosone dehydrogenase - - - 7.766e-231 720.0
CMS3_k127_3088010_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 405.0
CMS3_k127_3088010_4 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001018 226.0
CMS3_k127_3088010_5 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000001134 199.0
CMS3_k127_3088010_6 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000000000000000000000000000000000000001162 192.0
CMS3_k127_3088010_7 - - - - 0.0000000000000000000000000000000000000000000000001492 184.0
CMS3_k127_3088010_8 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000000012 121.0
CMS3_k127_3088010_9 Tetratricopeptide repeat - - - 0.000000000000000000000000003236 123.0
CMS3_k127_3122547_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1420.0
CMS3_k127_3122547_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 2.929e-238 744.0
CMS3_k127_3122547_2 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 595.0
CMS3_k127_3122547_3 long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 469.0
CMS3_k127_3122547_4 geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 385.0
CMS3_k127_3122547_5 SCP-2 sterol transfer family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005289 250.0
CMS3_k127_3122547_6 lipoate-protein ligase A K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000005807 236.0
CMS3_k127_3122547_7 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000001203 198.0
CMS3_k127_3122547_9 - - - - 0.000000002169 64.0
CMS3_k127_3123708_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 535.0
CMS3_k127_3123708_1 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 511.0
CMS3_k127_3123708_11 GDP-mannose 4,6 dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000239 55.0
CMS3_k127_3123708_2 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 445.0
CMS3_k127_3123708_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001112 281.0
CMS3_k127_3123708_4 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004732 254.0
CMS3_k127_3123708_5 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000000000000000000009452 245.0
CMS3_k127_3123708_6 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001152 235.0
CMS3_k127_3123708_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000659 224.0
CMS3_k127_3123708_8 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000202 139.0
CMS3_k127_3151400_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.147e-197 621.0
CMS3_k127_3151400_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 286.0
CMS3_k127_3152051_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1591.0
CMS3_k127_3152051_1 Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 567.0
CMS3_k127_3152051_2 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 297.0
CMS3_k127_3152051_3 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005002 263.0
CMS3_k127_3269657_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 361.0
CMS3_k127_3269657_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000005787 206.0
CMS3_k127_3269657_2 Histidine kinase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000002317 205.0
CMS3_k127_3269657_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000006024 123.0
CMS3_k127_332157_0 modulator of DNA gyrase K03592 - - 2.278e-207 653.0
CMS3_k127_332157_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 611.0
CMS3_k127_332157_2 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 362.0
CMS3_k127_332157_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 336.0
CMS3_k127_332157_4 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 306.0
CMS3_k127_332157_5 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000002981 168.0
CMS3_k127_332157_6 CBS domain containing protein - - - 0.00000000000000000000000000000000001248 139.0
CMS3_k127_332157_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000003789 126.0
CMS3_k127_3397920_0 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 3.393e-232 733.0
CMS3_k127_3397920_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 312.0
CMS3_k127_3397920_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003159 284.0
CMS3_k127_3397920_3 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003394 254.0
CMS3_k127_3397920_4 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009512 252.0
CMS3_k127_3397920_5 integral membrane protein K02221 - - 0.00000000000000000000000000000000000000000000000000000001973 203.0
CMS3_k127_3397920_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000003374 191.0
CMS3_k127_3397920_7 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000004668 118.0
CMS3_k127_3423952_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.983e-264 826.0
CMS3_k127_3423952_1 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001436 262.0
CMS3_k127_3426536_0 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 466.0
CMS3_k127_3426536_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000001477 235.0
CMS3_k127_3426536_2 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000001266 196.0
CMS3_k127_3438250_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.834e-273 847.0
CMS3_k127_3438250_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 565.0
CMS3_k127_3438250_10 Thioredoxin-like - - - 0.00000000000000000000002743 107.0
CMS3_k127_3438250_12 Protein of unknown function (DUF2905) - - - 0.0000006276 60.0
CMS3_k127_3438250_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 391.0
CMS3_k127_3438250_3 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 372.0
CMS3_k127_3438250_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 299.0
CMS3_k127_3438250_5 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 292.0
CMS3_k127_3438250_6 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001753 273.0
CMS3_k127_3438250_7 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000002499 218.0
CMS3_k127_3438250_8 PFAM pyridoxamine 5'-phosphate oxidase-related FMN-binding K07226 - - 0.00000000000000000000000000000000000000000003254 170.0
CMS3_k127_3438250_9 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000000000000006082 131.0
CMS3_k127_3505006_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1462.0
CMS3_k127_3505006_1 PFAM Mammalian cell entry related domain protein K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 539.0
CMS3_k127_3505006_2 paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001425 266.0
CMS3_k127_3505006_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001013 251.0
CMS3_k127_3505006_4 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000005952 180.0
CMS3_k127_3505006_5 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000000006897 173.0
CMS3_k127_3505006_6 paraquat-inducible protein A K03808 - - 0.000000000000000000000000000000001776 137.0
CMS3_k127_3505006_7 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000000000001222 131.0
CMS3_k127_3505006_8 BolA-like protein K05527 - - 0.00000000000000000000000009526 110.0
CMS3_k127_3545016_0 TrkA-N domain protein K03499 - - 2.164e-208 660.0
CMS3_k127_3545016_1 Poly-beta-hydroxybutyrate K03821 - - 1.99e-207 660.0
CMS3_k127_3545016_10 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000009271 69.0
CMS3_k127_3545016_11 response regulator K07666 - - 0.000000000002438 66.0
CMS3_k127_3545016_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 588.0
CMS3_k127_3545016_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 552.0
CMS3_k127_3545016_4 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 455.0
CMS3_k127_3545016_5 Inositol monophosphatase K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 356.0
CMS3_k127_3545016_6 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 325.0
CMS3_k127_3545016_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000002278 254.0
CMS3_k127_3545016_8 cheY-homologous receiver domain K02657 - - 0.0000000000000000000000000000000000000000000000000000000000000007956 222.0
CMS3_k127_3545016_9 response regulator receiver K02658 - - 0.0000000000000000000000000000000000000000000000000000000191 198.0
CMS3_k127_362813_0 Histidine kinase K02487,K06596 - - 2.589e-289 941.0
CMS3_k127_3654749_0 TonB dependent receptor - - - 6.678e-222 713.0
CMS3_k127_3654749_1 PFAM sigma-54 factor interaction domain-containing protein K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 594.0
CMS3_k127_3654749_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000001069 218.0
CMS3_k127_3654749_11 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000004189 196.0
CMS3_k127_3654749_12 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000000001613 186.0
CMS3_k127_3654749_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009973 517.0
CMS3_k127_3654749_3 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 445.0
CMS3_k127_3654749_4 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 399.0
CMS3_k127_3654749_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 374.0
CMS3_k127_3654749_6 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 308.0
CMS3_k127_3654749_7 ATPases associated with a variety of cellular activities K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005119 283.0
CMS3_k127_3654749_8 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004307 282.0
CMS3_k127_3654749_9 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001818 244.0
CMS3_k127_3703416_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 554.0
CMS3_k127_3703416_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 527.0
CMS3_k127_3703416_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 459.0
CMS3_k127_3703416_3 GntR family K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000002611 241.0
CMS3_k127_3710628_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 447.0
CMS3_k127_3710628_1 iron-sulfur 4fe-4s ferredoxin transmembrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 353.0
CMS3_k127_3710628_2 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 333.0
CMS3_k127_3710628_3 cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 324.0
CMS3_k127_3710628_4 Cbb3-type cytochrome oxidase K00407 - - 0.000000000002678 70.0
CMS3_k127_3710628_5 Cytochrome c oxidase, subunit K00406 - - 0.00000000005319 63.0
CMS3_k127_3728767_0 associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 531.0
CMS3_k127_3728767_1 peptidase, U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 519.0
CMS3_k127_3728767_10 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 284.0
CMS3_k127_3728767_11 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000009841 231.0
CMS3_k127_3728767_12 lipid carrier protein - - - 0.00000000000000000000000000000000000003007 149.0
CMS3_k127_3728767_13 - - - - 0.0000000000000000002502 88.0
CMS3_k127_3728767_14 - - - - 0.000000000000001389 79.0
CMS3_k127_3728767_15 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00001017 47.0
CMS3_k127_3728767_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 486.0
CMS3_k127_3728767_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 466.0
CMS3_k127_3728767_4 protein conserved in bacteria K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 460.0
CMS3_k127_3728767_5 Putative metallopeptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 448.0
CMS3_k127_3728767_6 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 441.0
CMS3_k127_3728767_7 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 393.0
CMS3_k127_3728767_8 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 351.0
CMS3_k127_3728767_9 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 308.0
CMS3_k127_3816006_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 328.0
CMS3_k127_3816006_1 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 319.0
CMS3_k127_3816006_2 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.0000000000000000000000000000001259 129.0
CMS3_k127_3827766_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1090.0
CMS3_k127_3827766_1 Esterase of the alpha-beta hydrolase superfamily - - - 1.334e-308 970.0
CMS3_k127_3827766_10 Peptidase M15 K03791 - - 0.000000000000000000000000000001926 122.0
CMS3_k127_3827766_11 Peptidase M15 K03791 - - 0.000000000000002928 88.0
CMS3_k127_3827766_12 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000008827 83.0
CMS3_k127_3827766_13 Heat shock protein DnaJ domain protein K05516 - - 0.00001663 48.0
CMS3_k127_3827766_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 597.0
CMS3_k127_3827766_3 PFAM type III effector Hrp-dependent outers K21948 - 2.7.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 552.0
CMS3_k127_3827766_4 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 510.0
CMS3_k127_3827766_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 473.0
CMS3_k127_3827766_6 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020,K08319 - 1.1.1.31,1.1.1.411 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 397.0
CMS3_k127_3827766_7 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 297.0
CMS3_k127_3827766_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000000000006357 236.0
CMS3_k127_3827766_9 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000003038 179.0
CMS3_k127_3839297_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1156.0
CMS3_k127_3839297_1 PFAM Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 553.0
CMS3_k127_3839297_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 288.0
CMS3_k127_3839297_3 cytochrome - - - 0.00007302 46.0
CMS3_k127_3861301_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 348.0
CMS3_k127_3861301_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000393 192.0
CMS3_k127_3861301_2 - - - - 0.000000000000000000000000000000000000000000002775 176.0
CMS3_k127_3861301_3 - - - - 0.000000000000007746 82.0
CMS3_k127_3861301_4 TIGRFAM phage tail protein - - - 0.00002072 49.0
CMS3_k127_3868540_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 473.0
CMS3_k127_3868540_1 Belongs to the hyi family K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 417.0
CMS3_k127_3868540_2 Belongs to the peptidase S11 family K01286,K07258,K07262 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000006291 251.0
CMS3_k127_3868540_3 Belongs to the TPP enzyme family K01608 - 4.1.1.47 0.000000000000000000000000000000000000008327 146.0
CMS3_k127_3895148_0 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000602 289.0
CMS3_k127_3895148_1 M6 family metalloprotease domain protein - - - 0.00000000000002341 83.0
CMS3_k127_3895148_2 FecR protein - - - 0.000000003639 67.0
CMS3_k127_3902430_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 5.979e-263 820.0
CMS3_k127_3902430_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 504.0
CMS3_k127_3902430_10 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000003746 164.0
CMS3_k127_3902430_11 Bacterial SH3 domain - - - 0.000000000000000000000000000000000000000002786 160.0
CMS3_k127_3902430_12 pilus organization K07346 - - 0.000000000000000000000000000000000009258 149.0
CMS3_k127_3902430_13 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000000002788 136.0
CMS3_k127_3902430_14 Protein of unknown function (DUF2892) - - - 0.0000000000000000000002368 98.0
CMS3_k127_3902430_15 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000004544 54.0
CMS3_k127_3902430_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 494.0
CMS3_k127_3902430_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 426.0
CMS3_k127_3902430_4 Outer membrane usher protein K07347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 364.0
CMS3_k127_3902430_5 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000007957 256.0
CMS3_k127_3902430_6 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001914 248.0
CMS3_k127_3902430_7 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000003974 211.0
CMS3_k127_3902430_8 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000003179 192.0
CMS3_k127_3902430_9 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000007019 173.0
CMS3_k127_3929763_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 518.0
CMS3_k127_3929763_1 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 503.0
CMS3_k127_3929763_2 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 430.0
CMS3_k127_3929763_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006546 278.0
CMS3_k127_3929763_4 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004905 265.0
CMS3_k127_3929763_5 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003809 261.0
CMS3_k127_3929763_6 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.000000000000000000000000000000000000000000000003421 175.0
CMS3_k127_3929763_7 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000000000000000000000002063 172.0
CMS3_k127_3929763_8 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000001684 146.0
CMS3_k127_3929763_9 Protein of unknown function (DUF493) K09158 - - 0.000000000000000000000000000000000006214 138.0
CMS3_k127_394040_0 Bacterial protein of unknown function (DUF853) K06915 - - 5.247e-236 739.0
CMS3_k127_394040_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 569.0
CMS3_k127_394040_10 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000003503 159.0
CMS3_k127_394040_11 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000002828 141.0
CMS3_k127_394040_12 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000239 126.0
CMS3_k127_394040_13 - - - - 0.0000000000000000000000000000004036 130.0
CMS3_k127_394040_14 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000001601 123.0
CMS3_k127_394040_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 477.0
CMS3_k127_394040_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 389.0
CMS3_k127_394040_4 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 321.0
CMS3_k127_394040_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 317.0
CMS3_k127_394040_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001704 274.0
CMS3_k127_394040_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001915 286.0
CMS3_k127_394040_8 Trypsin - - - 0.000000000000000000000000000000000000000000000002078 190.0
CMS3_k127_394040_9 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000000000000007453 172.0
CMS3_k127_3944240_0 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0 1116.0
CMS3_k127_3944240_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 4.755e-317 983.0
CMS3_k127_3944240_10 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000009122 158.0
CMS3_k127_3944240_11 beta-lactamase K06897 - 2.5.1.105 0.00000000000000000000000000000000000000548 152.0
CMS3_k127_3944240_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 1.74e-280 880.0
CMS3_k127_3944240_3 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 602.0
CMS3_k127_3944240_4 proteins of the AP superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 516.0
CMS3_k127_3944240_5 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 383.0
CMS3_k127_3944240_6 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 332.0
CMS3_k127_3944240_7 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 320.0
CMS3_k127_3944240_8 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 299.0
CMS3_k127_3944240_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000001288 182.0
CMS3_k127_3950384_0 arginine decarboxylase K01585 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008792,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0034641,GO:0042401,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 4.1.1.19 1.285e-268 841.0
CMS3_k127_3950384_1 Saccharopine dehydrogenase C-terminal domain K00290,K13746 - 1.5.1.43,1.5.1.7 3.326e-208 654.0
CMS3_k127_3950384_10 Belongs to the UPF0312 family - - - 0.0000000000000000000000002627 111.0
CMS3_k127_3950384_11 surface antigen - - - 0.000000001594 65.0
CMS3_k127_3950384_12 Glycine zipper 2TM domain - - - 0.000005201 55.0
CMS3_k127_3950384_2 Cytochrome c bacterial - - - 2.574e-204 645.0
CMS3_k127_3950384_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 320.0
CMS3_k127_3950384_4 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 317.0
CMS3_k127_3950384_5 LemA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 286.0
CMS3_k127_3950384_6 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003153 267.0
CMS3_k127_3950384_7 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002751 228.0
CMS3_k127_3950384_8 Cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000000000000000000000003975 221.0
CMS3_k127_3950384_9 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042401,GO:0042710,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044010,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044764,GO:0045312,GO:0046204,GO:0046983,GO:0048037,GO:0050662,GO:0051704,GO:0070279,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.1.1.96 0.00000000000000000000000001262 111.0
CMS3_k127_3959015_0 AAA domain (dynein-related subfamily) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 466.0
CMS3_k127_3959015_1 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 466.0
CMS3_k127_3959015_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 336.0
CMS3_k127_3959015_3 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000004434 131.0
CMS3_k127_3959015_4 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000139 126.0
CMS3_k127_3959015_5 - - - - 0.000000000000000000000000001536 123.0
CMS3_k127_3959015_6 - - - - 0.000004213 55.0
CMS3_k127_396191_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1557.0
CMS3_k127_396191_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 4.948e-295 916.0
CMS3_k127_396191_10 AAA domain K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 508.0
CMS3_k127_396191_11 Cytochrome C oxidase, cbb3-type, subunit III K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 442.0
CMS3_k127_396191_12 phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 434.0
CMS3_k127_396191_13 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 357.0
CMS3_k127_396191_14 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 344.0
CMS3_k127_396191_15 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 343.0
CMS3_k127_396191_16 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 337.0
CMS3_k127_396191_17 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 314.0
CMS3_k127_396191_18 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
CMS3_k127_396191_19 Beta-lactamase enzyme family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 316.0
CMS3_k127_396191_2 ABC transporter transmembrane region K06147 - - 8.871e-294 912.0
CMS3_k127_396191_20 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 312.0
CMS3_k127_396191_21 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 282.0
CMS3_k127_396191_22 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001112 279.0
CMS3_k127_396191_23 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000003984 229.0
CMS3_k127_396191_24 PFAM ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000188 211.0
CMS3_k127_396191_25 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000007093 210.0
CMS3_k127_396191_26 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000003888 207.0
CMS3_k127_396191_27 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000002724 206.0
CMS3_k127_396191_28 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000938 123.0
CMS3_k127_396191_29 Putative regulatory protein - - - 0.0000000000000000000000000004044 115.0
CMS3_k127_396191_3 Alpha beta hydrolase K03821 - - 3.299e-248 784.0
CMS3_k127_396191_30 Type II secretion system protein B K02451 - - 0.00000000000000000006586 100.0
CMS3_k127_396191_4 4-hydroxyphenylacetate 3-hydroxylase K14534 - 4.2.1.120,5.3.3.3 1.461e-230 725.0
CMS3_k127_396191_5 Sugar (and other) transporter - - - 1.971e-197 628.0
CMS3_k127_396191_6 4Fe-4S ferredoxin, iron-sulfur binding K18929 - - 6.102e-196 622.0
CMS3_k127_396191_7 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 9.861e-194 608.0
CMS3_k127_396191_8 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 562.0
CMS3_k127_396191_9 Phosphate K00625,K00634 - 2.3.1.19,2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 556.0
CMS3_k127_3965167_0 Aldehyde dehydrogenase family - - - 5.69e-242 756.0
CMS3_k127_3965167_1 L-lactate permease K03303 - - 1.302e-234 741.0
CMS3_k127_3965167_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 344.0
CMS3_k127_3965167_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 316.0
CMS3_k127_3965167_12 COQ9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 293.0
CMS3_k127_3965167_13 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009148 264.0
CMS3_k127_3965167_14 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000001018 256.0
CMS3_k127_3965167_15 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003359 234.0
CMS3_k127_3965167_16 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000777 233.0
CMS3_k127_3965167_17 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000002415 216.0
CMS3_k127_3965167_18 Redoxin - - - 0.00000000000000000000000000000000000000000013 165.0
CMS3_k127_3965167_19 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.00000000000000000000000000000000008355 153.0
CMS3_k127_3965167_2 Homoserine dehydrogenase, NAD binding domain-containing protein - - - 3.259e-213 673.0
CMS3_k127_3965167_21 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000003484 114.0
CMS3_k127_3965167_22 Major facilitator K03301 - - 0.000000000000000000000000008541 113.0
CMS3_k127_3965167_23 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000002217 104.0
CMS3_k127_3965167_24 Protein of unknown function (DUF3301) - - - 0.00000000000000000003596 101.0
CMS3_k127_3965167_25 Aldo/keto reductase family - - - 0.000000000000000001692 92.0
CMS3_k127_3965167_3 cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 574.0
CMS3_k127_3965167_4 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 557.0
CMS3_k127_3965167_5 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 481.0
CMS3_k127_3965167_6 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 475.0
CMS3_k127_3965167_7 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 412.0
CMS3_k127_3965167_8 Histidine kinase K10125 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 400.0
CMS3_k127_3965167_9 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 385.0
CMS3_k127_3970908_0 Sulphur oxidation protein SoxZ K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 340.0
CMS3_k127_3970908_1 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
CMS3_k127_3970908_2 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000006278 216.0
CMS3_k127_3970908_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000521 175.0
CMS3_k127_3970908_4 - - - - 0.0000000000000000000000000001504 118.0
CMS3_k127_3989637_0 Bacterial transcriptional repressor C-terminal K09017 - - 0.000000000000000000000000000000000000000000000000000000000000000000009378 241.0
CMS3_k127_3989637_1 HlyD family K01993 - - 0.00000000000000000000000000000000000007929 149.0
CMS3_k127_3989637_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000002142 122.0
CMS3_k127_4007621_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.08e-321 989.0
CMS3_k127_4007621_1 abc transporter K06020 - 3.6.3.25 6.119e-314 966.0
CMS3_k127_4007621_10 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 301.0
CMS3_k127_4007621_11 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007767 252.0
CMS3_k127_4007621_12 ABC transporter, ATP-binding protein K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003028 243.0
CMS3_k127_4007621_13 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000004746 190.0
CMS3_k127_4007621_14 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.0000000000000000000000000000000000000000000001222 169.0
CMS3_k127_4007621_15 - - - - 0.00000000000000000000000000000000000000000003321 173.0
CMS3_k127_4007621_16 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000002091 179.0
CMS3_k127_4007621_17 lipoprotein - - - 0.00000000000000000000000008267 111.0
CMS3_k127_4007621_18 ABC transporter K15738 - - 0.0000000000000000000000001716 109.0
CMS3_k127_4007621_19 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000009303 98.0
CMS3_k127_4007621_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K11959 - - 4.468e-240 746.0
CMS3_k127_4007621_20 Uncharacterized protein conserved in bacteria (DUF2076) K09945 - - 0.000000000131 70.0
CMS3_k127_4007621_3 Branched-chain amino acid transport system / permease component K11960 - - 1.168e-208 661.0
CMS3_k127_4007621_4 Sodium/hydrogen exchanger family K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 599.0
CMS3_k127_4007621_5 Branched-chain amino acid transport system / permease component K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 554.0
CMS3_k127_4007621_6 Protein of unknown function (DUF3422) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 465.0
CMS3_k127_4007621_7 Urea ABC transporter ATP-binding protein urtd K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 419.0
CMS3_k127_4007621_8 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 359.0
CMS3_k127_4007621_9 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 327.0
CMS3_k127_4021858_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0 1091.0
CMS3_k127_4021858_1 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 482.0
CMS3_k127_4021858_10 positive regulation of type IV pilus biogenesis K07343 - - 0.00000000000000000000000002076 111.0
CMS3_k127_4021858_11 Universal stress protein family - - - 0.000000000000000000003958 95.0
CMS3_k127_4021858_2 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 469.0
CMS3_k127_4021858_3 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 334.0
CMS3_k127_4021858_4 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 304.0
CMS3_k127_4021858_5 Glycosyl transferase group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009288 282.0
CMS3_k127_4021858_6 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004214 247.0
CMS3_k127_4021858_7 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000007641 209.0
CMS3_k127_4021858_8 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000003093 209.0
CMS3_k127_4021858_9 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000009864 124.0
CMS3_k127_4068224_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.0 1370.0
CMS3_k127_4068224_1 Belongs to the malate synthase family K01638 - 2.3.3.9 1.575e-276 858.0
CMS3_k127_4068224_10 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 476.0
CMS3_k127_4068224_11 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 458.0
CMS3_k127_4068224_12 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 419.0
CMS3_k127_4068224_13 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 413.0
CMS3_k127_4068224_14 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 403.0
CMS3_k127_4068224_15 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 392.0
CMS3_k127_4068224_16 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 332.0
CMS3_k127_4068224_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 328.0
CMS3_k127_4068224_18 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 302.0
CMS3_k127_4068224_19 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 317.0
CMS3_k127_4068224_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.475e-266 824.0
CMS3_k127_4068224_20 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005611 273.0
CMS3_k127_4068224_21 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000506 250.0
CMS3_k127_4068224_22 CDGSH-type zinc finger. Function unknown. - - - 0.00000000000000000000000000000000000000000000000000000000000009469 219.0
CMS3_k127_4068224_23 Belongs to the anti-sigma-factor antagonist family - - - 0.00000000000000000000000000000000000000000000000000004232 202.0
CMS3_k127_4068224_24 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000002003 181.0
CMS3_k127_4068224_25 - - - - 0.00000000000000000000000000000000000000000000009403 177.0
CMS3_k127_4068224_26 FR47-like protein - - - 0.0000000000000000000000000000000000000000000002876 173.0
CMS3_k127_4068224_27 SMART CoA-binding domain protein K06929 - - 0.000000000000000000000000000000000000000000003188 169.0
CMS3_k127_4068224_28 - - - - 0.0000000000000000000000000000000000002111 147.0
CMS3_k127_4068224_29 Phasin protein - - - 0.000000000000000000000000000000000001948 145.0
CMS3_k127_4068224_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 7.632e-220 689.0
CMS3_k127_4068224_30 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000911 126.0
CMS3_k127_4068224_31 Muconolactone delta-isomerase K03464 - 5.3.3.4 0.0000000000002354 69.0
CMS3_k127_4068224_32 Cysteine-rich CWC - - - 0.000001436 53.0
CMS3_k127_4068224_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 5.39e-213 674.0
CMS3_k127_4068224_5 PFAM Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 4.543e-212 664.0
CMS3_k127_4068224_6 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 1.007e-202 651.0
CMS3_k127_4068224_7 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 503.0
CMS3_k127_4068224_8 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 507.0
CMS3_k127_4068224_9 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005797 477.0
CMS3_k127_4081058_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 5.921e-317 985.0
CMS3_k127_4081058_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 365.0
CMS3_k127_4081058_2 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 359.0
CMS3_k127_4081058_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 316.0
CMS3_k127_4081058_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 285.0
CMS3_k127_4081058_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002092 277.0
CMS3_k127_4081058_6 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000005935 252.0
CMS3_k127_4081058_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000005675 108.0
CMS3_k127_4081058_8 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.0000000000932 70.0
CMS3_k127_4096171_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1270.0
CMS3_k127_4096171_1 extracellular solute-binding protein - - - 3.6e-322 999.0
CMS3_k127_4096171_10 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 436.0
CMS3_k127_4096171_11 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 403.0
CMS3_k127_4096171_12 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 402.0
CMS3_k127_4096171_13 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 356.0
CMS3_k127_4096171_14 squalene synthase HpnC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 357.0
CMS3_k127_4096171_15 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 310.0
CMS3_k127_4096171_16 Transcriptional regulatory protein, C terminal K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008386 282.0
CMS3_k127_4096171_17 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000007473 162.0
CMS3_k127_4096171_18 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000001358 151.0
CMS3_k127_4096171_19 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000002324 128.0
CMS3_k127_4096171_2 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.582e-262 819.0
CMS3_k127_4096171_20 - - - - 0.0000000000000000000000000001902 119.0
CMS3_k127_4096171_21 - - - - 0.000000000006383 68.0
CMS3_k127_4096171_22 - - - - 0.0000003712 55.0
CMS3_k127_4096171_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.079e-217 681.0
CMS3_k127_4096171_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 3.03e-201 638.0
CMS3_k127_4096171_5 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 600.0
CMS3_k127_4096171_6 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 599.0
CMS3_k127_4096171_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 519.0
CMS3_k127_4096171_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 476.0
CMS3_k127_4096171_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 480.0
CMS3_k127_4107833_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 531.0
CMS3_k127_4107833_1 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 374.0
CMS3_k127_4107833_10 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000006607 71.0
CMS3_k127_4107833_2 Biotin carboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 365.0
CMS3_k127_4107833_3 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 339.0
CMS3_k127_4107833_4 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002452 272.0
CMS3_k127_4107833_5 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001607 242.0
CMS3_k127_4107833_6 Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000000001633 184.0
CMS3_k127_4107833_7 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000001659 169.0
CMS3_k127_4107833_8 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000003324 127.0
CMS3_k127_4107833_9 - - - - 0.00000000000000000000005649 106.0
CMS3_k127_4134418_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.0 1313.0
CMS3_k127_4134418_1 PFAM Amylo-alpha-16-glucosidase K00705 - 2.4.1.25 2.323e-286 895.0
CMS3_k127_4134418_10 Choline dehydrogenase and related flavoproteins - - - 0.0000000000000000000000000000000000000000000000000000000000000009495 237.0
CMS3_k127_4134418_11 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000000000000000197 195.0
CMS3_k127_4134418_12 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000000000000000001119 138.0
CMS3_k127_4134418_13 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000003889 99.0
CMS3_k127_4134418_14 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000003989 92.0
CMS3_k127_4134418_15 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000003357 90.0
CMS3_k127_4134418_16 EF-hand, calcium binding motif - - - 0.000000000724 63.0
CMS3_k127_4134418_17 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00002281 51.0
CMS3_k127_4134418_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 8.409e-209 672.0
CMS3_k127_4134418_3 oxidoreductase activity, acting on CH-OH group of donors K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 368.0
CMS3_k127_4134418_4 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 360.0
CMS3_k127_4134418_5 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 343.0
CMS3_k127_4134418_6 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 341.0
CMS3_k127_4134418_7 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 292.0
CMS3_k127_4134418_8 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000006462 263.0
CMS3_k127_4134418_9 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001554 254.0
CMS3_k127_4149854_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1067.0
CMS3_k127_4149854_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.629e-235 733.0
CMS3_k127_4149854_10 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000011 147.0
CMS3_k127_4149854_11 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000002921 136.0
CMS3_k127_4149854_12 ChrR Cupin-like domain - - - 0.0000000000000000000000000000005803 132.0
CMS3_k127_4149854_13 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000000000008535 97.0
CMS3_k127_4149854_14 AraC-like ligand binding domain - - - 0.0000001892 52.0
CMS3_k127_4149854_16 Cupin 2, conserved barrel domain protein - - - 0.00002815 49.0
CMS3_k127_4149854_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.211e-220 694.0
CMS3_k127_4149854_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 356.0
CMS3_k127_4149854_4 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 340.0
CMS3_k127_4149854_5 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 328.0
CMS3_k127_4149854_6 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 319.0
CMS3_k127_4149854_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 297.0
CMS3_k127_4149854_8 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
CMS3_k127_4149854_9 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000000009394 210.0
CMS3_k127_4151711_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 1.642e-241 766.0
CMS3_k127_4151711_1 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 9.294e-217 677.0
CMS3_k127_4151711_10 Protein of unknown function (DUF1318) K09978 - - 0.0000000000000000000000000000000000000000000000000000005957 198.0
CMS3_k127_4151711_11 transcriptional regulator, XRE family - - - 0.000000000000000000000000000000000000009185 148.0
CMS3_k127_4151711_12 - - - - 0.00000000001412 66.0
CMS3_k127_4151711_2 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 578.0
CMS3_k127_4151711_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 491.0
CMS3_k127_4151711_4 3-5 exonuclease K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 430.0
CMS3_k127_4151711_5 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 360.0
CMS3_k127_4151711_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 362.0
CMS3_k127_4151711_7 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 332.0
CMS3_k127_4151711_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000007128 250.0
CMS3_k127_4151711_9 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
CMS3_k127_4152806_0 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 6.249e-214 681.0
CMS3_k127_4152806_1 TIGRFAM Formylmethanofuran dehydrogenase, subunit A K00200 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 430.0
CMS3_k127_4152806_2 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 380.0
CMS3_k127_4152806_3 formylmethanofuran dehydrogenase activity K00202 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002759 275.0
CMS3_k127_4152806_4 formylmethanofuran dehydrogenase, subunit K00201 - 1.2.7.12 0.0000007509 53.0
CMS3_k127_4154544_0 Formyl transferase K19640 - - 2.543e-237 747.0
CMS3_k127_4154544_1 Nickel-dependent hydrogenase K06281 - 1.12.99.6 1.11e-219 700.0
CMS3_k127_4154544_2 Bacterial regulatory protein, Fis family K19641 - - 2.134e-207 674.0
CMS3_k127_4154544_3 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 583.0
CMS3_k127_4154544_4 NiFe/NiFeSe hydrogenase small subunit C-terminal K00534 - 1.12.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 512.0
CMS3_k127_4154544_5 - - - - 0.000000000000000000000000000000000000001201 151.0
CMS3_k127_4154544_6 triphosphatase activity K18446 - 3.6.1.25 0.000000000000000000000000000000000001039 151.0
CMS3_k127_4154544_7 Belongs to the HypD family K04654 - - 0.0000000000000000004883 86.0
CMS3_k127_4154544_8 - - - - 0.000000000000002474 76.0
CMS3_k127_4154544_9 AIR synthase related protein, N-terminal domain K04655 - - 0.00003554 49.0
CMS3_k127_4175924_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1251.0
CMS3_k127_4175924_1 Oxidoreductase FAD-binding domain K00351 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 503.0
CMS3_k127_4175924_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009979 473.0
CMS3_k127_4175924_3 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 396.0
CMS3_k127_4175924_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004099 276.0
CMS3_k127_4175924_5 Rnf-Nqr subunit, membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008273 269.0
CMS3_k127_4175924_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000001802 250.0
CMS3_k127_4175924_7 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008150,GO:0008152,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030001,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0051179,GO:0051234,GO:0055114,GO:0098796,GO:1902494 1.6.5.8 0.0000000000000000000000000000000008178 131.0
CMS3_k127_4175924_8 protein conserved in bacteria K05952 - - 0.0009153 44.0
CMS3_k127_418835_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 7.928e-296 917.0
CMS3_k127_418835_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 364.0
CMS3_k127_418835_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 363.0
CMS3_k127_418835_3 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 322.0
CMS3_k127_418835_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000008056 258.0
CMS3_k127_418835_5 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.00000000000000000000000000000000000000000000000000000000000000000005428 237.0
CMS3_k127_418835_6 membrane - - - 0.00000000000000000000000000000000001327 141.0
CMS3_k127_418835_7 Protein of unknown function (DUF2970) - - - 0.0000000001064 64.0
CMS3_k127_4200849_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 6.798e-213 669.0
CMS3_k127_4200849_1 TIGRFAM phosphate binding protein K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 359.0
CMS3_k127_4200849_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 356.0
CMS3_k127_4200849_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001191 256.0
CMS3_k127_4266072_0 PFAM Polyphosphate kinase 2 K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 436.0
CMS3_k127_4266072_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 410.0
CMS3_k127_4266072_2 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000001355 147.0
CMS3_k127_4266072_3 Bacterial PH domain - - - 0.000000000000000000000000000007588 128.0
CMS3_k127_4266072_4 Helix-hairpin-helix motif - - - 0.0000000000000000003284 91.0
CMS3_k127_4283119_0 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 489.0
CMS3_k127_4283119_1 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 413.0
CMS3_k127_4283119_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 339.0
CMS3_k127_4283119_3 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 302.0
CMS3_k127_4283119_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000003796 162.0
CMS3_k127_4290932_0 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1099.0
CMS3_k127_4290932_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 472.0
CMS3_k127_4290932_2 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 345.0
CMS3_k127_4299217_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 511.0
CMS3_k127_4299217_1 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
CMS3_k127_4299217_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000008217 232.0
CMS3_k127_4299217_3 Thermostable hemolysin - - - 0.00000000000000000000000000000000000000000000000003787 187.0
CMS3_k127_4299217_4 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000001276 151.0
CMS3_k127_43046_0 carbohydrate binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 475.0
CMS3_k127_43046_1 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 296.0
CMS3_k127_43046_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000358 243.0
CMS3_k127_43046_3 Bacterial transglutaminase-like N-terminal region - - - 0.0001078 46.0
CMS3_k127_4384421_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 9.145e-283 878.0
CMS3_k127_4384421_1 Transketolase, pyrimidine binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 503.0
CMS3_k127_4384421_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 479.0
CMS3_k127_4384421_3 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000008396 170.0
CMS3_k127_4384421_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000218 96.0
CMS3_k127_4384421_5 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000125 60.0
CMS3_k127_4388924_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.931e-213 670.0
CMS3_k127_4388924_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 295.0
CMS3_k127_4388924_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000004199 61.0
CMS3_k127_4399183_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 561.0
CMS3_k127_4399183_1 - - - - 0.000000000000000000000000000000000000000001912 169.0
CMS3_k127_4399183_2 Protein of unknown function (DUF465) - - - 0.000000000000002155 78.0
CMS3_k127_4399183_3 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.00000004132 61.0
CMS3_k127_444109_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 564.0
CMS3_k127_444109_1 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 480.0
CMS3_k127_444109_10 SNARE associated Golgi protein - - - 0.0000000000000000003046 90.0
CMS3_k127_444109_2 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 400.0
CMS3_k127_444109_3 Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine K05396,K17950 - 4.4.1.15,4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 337.0
CMS3_k127_444109_4 Binding-protein-dependent transport system inner membrane component K10002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 320.0
CMS3_k127_444109_5 COG2755 Lysophospholipase L1 and related esterases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
CMS3_k127_444109_6 protein conserved in bacteria K09793 - - 0.000000000000000000000000000000000000000000001083 174.0
CMS3_k127_444109_7 - - - - 0.00000000000000000000000000000000000000000003719 165.0
CMS3_k127_444109_8 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000003354 137.0
CMS3_k127_444109_9 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.000000000000000000000000000004551 120.0
CMS3_k127_447682_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 6.353e-205 654.0
CMS3_k127_447682_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 415.0
CMS3_k127_447682_2 PFAM Zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 345.0
CMS3_k127_447682_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000002415 214.0
CMS3_k127_447682_4 - - - - 0.00000002337 61.0
CMS3_k127_447828_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1424.0
CMS3_k127_447828_1 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 382.0
CMS3_k127_447828_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006107 269.0
CMS3_k127_447828_3 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002056 250.0
CMS3_k127_447828_4 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000000001797 162.0
CMS3_k127_447828_5 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000000008293 123.0
CMS3_k127_447828_6 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000000000006911 111.0
CMS3_k127_447828_7 TraB family K09973 - - 0.000000000000000000000000009484 114.0
CMS3_k127_4483583_0 Molecular chaperone. Has ATPase activity K04079 - - 1.632e-301 935.0
CMS3_k127_4483583_1 PFAM MaoC domain protein dehydratase K14449 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0015977,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043427,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046185,GO:0046395,GO:0046487,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 299.0
CMS3_k127_4483583_2 Belongs to the enoyl-CoA hydratase isomerase family K13816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002307 269.0
CMS3_k127_4483583_3 Belongs to the RNase T2 family K01166,K01169 - 3.1.27.1,3.1.27.6 0.00000000000000000000000000000000000000000002715 170.0
CMS3_k127_4489293_0 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 561.0
CMS3_k127_4489293_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 435.0
CMS3_k127_4489293_2 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000003731 200.0
CMS3_k127_4489293_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000002662 176.0
CMS3_k127_4509526_0 MMPL family - - - 0.0 1328.0
CMS3_k127_4509526_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 590.0
CMS3_k127_4509526_10 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000006068 192.0
CMS3_k127_4509526_11 DoxX K15977 - - 0.000000000000000000000000000000000000000000001307 169.0
CMS3_k127_4509526_12 PFAM Extradiol ring-cleavage dioxygenase, class III K15777 - - 0.0000005568 59.0
CMS3_k127_4509526_2 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 451.0
CMS3_k127_4509526_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 402.0
CMS3_k127_4509526_4 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 357.0
CMS3_k127_4509526_5 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 346.0
CMS3_k127_4509526_6 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 347.0
CMS3_k127_4509526_7 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 326.0
CMS3_k127_4509526_8 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 321.0
CMS3_k127_4509526_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 295.0
CMS3_k127_4539566_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 4.262e-251 788.0
CMS3_k127_4539566_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 1.229e-250 780.0
CMS3_k127_4539566_10 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 341.0
CMS3_k127_4539566_11 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 306.0
CMS3_k127_4539566_12 membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
CMS3_k127_4539566_13 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000003158 231.0
CMS3_k127_4539566_14 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000004231 188.0
CMS3_k127_4539566_15 NlpC/P60 family - - - 0.00000000000000000000000000000000000000000000000006817 182.0
CMS3_k127_4539566_16 - - - - 0.0000000000000000000000000000000000000000000000002704 184.0
CMS3_k127_4539566_17 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.000000000000000000000000000000000000000000002317 177.0
CMS3_k127_4539566_18 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000007169 162.0
CMS3_k127_4539566_19 maturation - - - 0.000000000000000000000000000000000000000002928 160.0
CMS3_k127_4539566_2 Binding-protein-dependent transport system inner membrane component K02011 - - 1.545e-224 708.0
CMS3_k127_4539566_20 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000001785 152.0
CMS3_k127_4539566_21 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.0000000000000000000000000000000000000003007 156.0
CMS3_k127_4539566_22 Bacterial type II and III secretion system protein - - - 0.000000000000000000000000000000002161 140.0
CMS3_k127_4539566_23 Protein of unknown function (DUF504) - - - 0.000000000000000000002309 96.0
CMS3_k127_4539566_24 Resolvase - - - 0.000002543 54.0
CMS3_k127_4539566_25 - - - - 0.00003184 54.0
CMS3_k127_4539566_3 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 535.0
CMS3_k127_4539566_4 glutamate--cysteine ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 538.0
CMS3_k127_4539566_5 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 523.0
CMS3_k127_4539566_6 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 511.0
CMS3_k127_4539566_7 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 405.0
CMS3_k127_4539566_8 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K18006 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 348.0
CMS3_k127_4539566_9 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 348.0
CMS3_k127_4614965_0 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 4.66e-239 746.0
CMS3_k127_4614965_1 Belongs to the TPP enzyme family K01608 - 4.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 509.0
CMS3_k127_4614965_2 Transcriptional regulator K13641 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 302.0
CMS3_k127_4633832_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 1297.0
CMS3_k127_4633832_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 1.361e-216 681.0
CMS3_k127_4633832_10 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000000000000000216 150.0
CMS3_k127_4633832_11 Protein of unknown function (DUF3568) - - - 0.00000000000000000000008403 104.0
CMS3_k127_4633832_12 ethanolamine kinase activity K07251 - 2.7.1.89 0.000000000000001878 88.0
CMS3_k127_4633832_13 Glycosyl Transferase - - - 0.00000008112 64.0
CMS3_k127_4633832_14 ethanolamine kinase activity K07251 - 2.7.1.89 0.000002927 59.0
CMS3_k127_4633832_15 Cupin domain - - - 0.00002698 52.0
CMS3_k127_4633832_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 8.317e-207 661.0
CMS3_k127_4633832_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 430.0
CMS3_k127_4633832_4 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 416.0
CMS3_k127_4633832_5 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 401.0
CMS3_k127_4633832_6 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009922 381.0
CMS3_k127_4633832_7 Sodium:solute symporter family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 328.0
CMS3_k127_4633832_8 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000007128 265.0
CMS3_k127_4633832_9 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000402 209.0
CMS3_k127_4649349_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.237e-199 629.0
CMS3_k127_4649349_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007684 610.0
CMS3_k127_4649349_10 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 336.0
CMS3_k127_4649349_11 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 308.0
CMS3_k127_4649349_12 SecretomeP prediction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001585 265.0
CMS3_k127_4649349_13 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000002588 229.0
CMS3_k127_4649349_14 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000001901 208.0
CMS3_k127_4649349_15 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000000000006483 177.0
CMS3_k127_4649349_16 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.00000000000000000000000000000000000000004178 153.0
CMS3_k127_4649349_17 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000001782 124.0
CMS3_k127_4649349_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000007026 109.0
CMS3_k127_4649349_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000007564 99.0
CMS3_k127_4649349_2 Belongs to the peptidase S1C family K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 529.0
CMS3_k127_4649349_20 transporter antisigma-factor antagonist STAS K07122 - - 0.000000000000000003762 88.0
CMS3_k127_4649349_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 436.0
CMS3_k127_4649349_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 440.0
CMS3_k127_4649349_5 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 421.0
CMS3_k127_4649349_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 430.0
CMS3_k127_4649349_7 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 373.0
CMS3_k127_4649349_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 353.0
CMS3_k127_4649349_9 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 344.0
CMS3_k127_4662154_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1052.0
CMS3_k127_4662154_1 SMART Elongator protein 3 MiaB NifB K09711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 505.0
CMS3_k127_4662154_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K21308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 456.0
CMS3_k127_4662154_3 DMSO reductase anchor subunit (DmsC) K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 393.0
CMS3_k127_4662154_4 lipoate-protein ligase A K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 383.0
CMS3_k127_4662154_5 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 304.0
CMS3_k127_4662154_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000007702 216.0
CMS3_k127_4662154_7 DsrE/DsrF-like family K07092 - - 0.0000000000000000000000000000000000000000000000001172 179.0
CMS3_k127_4662154_8 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000001464 141.0
CMS3_k127_4662154_9 Rhodanese Homology Domain - - - 0.000000000000000000000000000005831 122.0
CMS3_k127_4689179_0 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 570.0
CMS3_k127_4689179_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 512.0
CMS3_k127_4689179_2 PLD-like domain - - - 0.0000000000000000000000000000000000000005794 156.0
CMS3_k127_4689179_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000001201 141.0
CMS3_k127_4689179_4 Protein of unknown function (DUF2892) - - - 0.000000000000000000000009178 102.0
CMS3_k127_4689179_5 Ribosomal protein L33 K02913 - - 0.000000000000000000000473 96.0
CMS3_k127_4689179_6 Protein of unknown function (DUF3108) - - - 0.0000001214 55.0
CMS3_k127_4691172_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 504.0
CMS3_k127_4691172_1 PFAM sodium calcium exchanger K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 464.0
CMS3_k127_4691172_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 470.0
CMS3_k127_4691172_3 Conserved Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 315.0
CMS3_k127_4691172_4 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000001021 174.0
CMS3_k127_4691172_5 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000000000000000000001153 141.0
CMS3_k127_4691172_6 - - - - 0.00000000000000000000000000000008822 132.0
CMS3_k127_4691172_7 - - - - 0.0000000000000000000000000000002934 127.0
CMS3_k127_4759549_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 583.0
CMS3_k127_4759549_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000544 137.0
CMS3_k127_4759549_2 - - - - 0.000005504 54.0
CMS3_k127_4784460_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 582.0
CMS3_k127_4784460_1 probably involved in cell wall - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 501.0
CMS3_k127_4814484_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 4.796e-288 897.0
CMS3_k127_4814484_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 575.0
CMS3_k127_4814484_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 518.0
CMS3_k127_4814484_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 392.0
CMS3_k127_4814484_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 385.0
CMS3_k127_4814484_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 371.0
CMS3_k127_4814484_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005415 269.0
CMS3_k127_4814484_7 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000001011 261.0
CMS3_k127_4831616_0 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 501.0
CMS3_k127_4831616_1 e1 component (alpha subunit) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 428.0
CMS3_k127_4831616_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 349.0
CMS3_k127_4831616_3 NnrU protein - - - 0.0000000000000000000000000000000000000000000000004624 197.0
CMS3_k127_4831616_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001583 175.0
CMS3_k127_4831616_5 Domain of unknown function (DUF1992) - - - 0.0000000000000000000000000002839 121.0
CMS3_k127_4833652_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 387.0
CMS3_k127_4833652_1 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000326 237.0
CMS3_k127_4833652_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000001228 220.0
CMS3_k127_4833652_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000004245 130.0
CMS3_k127_4853588_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 591.0
CMS3_k127_4853588_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 509.0
CMS3_k127_4853588_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 398.0
CMS3_k127_4853588_3 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 319.0
CMS3_k127_4853588_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001491 263.0
CMS3_k127_4853588_5 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000001586 201.0
CMS3_k127_4853588_6 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000000000000000000000293 153.0
CMS3_k127_4853588_7 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000001434 99.0
CMS3_k127_4853588_8 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000007819 62.0
CMS3_k127_4864295_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 2005.0
CMS3_k127_4864295_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1132.0
CMS3_k127_4864295_10 Protein of unknown function, DUF480 K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000003578 239.0
CMS3_k127_4864295_11 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.00000000000000000000000000000000000000004617 167.0
CMS3_k127_4864295_12 - - - - 0.00000000000000000000000000000004468 143.0
CMS3_k127_4864295_13 - - - - 0.0000000000000005546 86.0
CMS3_k127_4864295_2 Alpha amylase, catalytic domain K01236 - 3.2.1.141 2.601e-246 775.0
CMS3_k127_4864295_3 Chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 494.0
CMS3_k127_4864295_4 Alkaline and neutral invertase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 456.0
CMS3_k127_4864295_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 406.0
CMS3_k127_4864295_6 Peptidoglycan-binding domain 1 protein K02450,K03791,K17733 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 383.0
CMS3_k127_4864295_7 Domain of unknown function (DUF4157) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 340.0
CMS3_k127_4864295_8 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 326.0
CMS3_k127_4864295_9 SMART alpha amylase, catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 304.0
CMS3_k127_4865391_0 GGDEF domain containing protein - - - 1.212e-201 647.0
CMS3_k127_4865391_1 Protein of unknown function (DUF2889) - - - 0.00000000000000000000000000000000000000000000000002877 187.0
CMS3_k127_4865391_2 of blue-light using FAD. The BLUF domain has been shown to bind FAD in the AppA protein - - - 0.0000000000000000000001261 102.0
CMS3_k127_4866750_0 AAA domain - - - 4.351e-316 987.0
CMS3_k127_4866750_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 6.291e-233 728.0
CMS3_k127_4866750_10 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000007397 174.0
CMS3_k127_4866750_11 PFAM UspA - - - 0.0000000000000000000000001845 117.0
CMS3_k127_4866750_12 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000005362 72.0
CMS3_k127_4866750_2 DHH family K07462 - - 1.206e-220 698.0
CMS3_k127_4866750_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 574.0
CMS3_k127_4866750_4 PFAM MgtC SapB transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 515.0
CMS3_k127_4866750_5 PFAM tRNA synthetase class II (D K and N) K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 481.0
CMS3_k127_4866750_6 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007783 473.0
CMS3_k127_4866750_7 PFAM glutaredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 349.0
CMS3_k127_4866750_8 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 322.0
CMS3_k127_4866750_9 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001577 245.0
CMS3_k127_4915877_0 Carbon starvation protein CstA K06200 - - 4.619e-248 782.0
CMS3_k127_4915877_1 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway - - - 0.0000000000000000000000000000000000000000073 162.0
CMS3_k127_4915877_2 - - - - 0.00000000000000000000007097 102.0
CMS3_k127_4915877_3 Arsenite-activated ATPase (ArsA) K01551 - 3.6.3.16 0.0003039 45.0
CMS3_k127_4919281_0 Bacterial periplasmic substrate-binding proteins K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 468.0
CMS3_k127_4919281_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 339.0
CMS3_k127_4919281_2 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001064 271.0
CMS3_k127_4919281_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000295 214.0
CMS3_k127_4919281_4 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000002533 199.0
CMS3_k127_4932188_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1282.0
CMS3_k127_4932188_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 589.0
CMS3_k127_4932188_2 AIR synthase related protein, N-terminal domain K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 372.0
CMS3_k127_4932188_3 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 359.0
CMS3_k127_4932188_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 327.0
CMS3_k127_4932188_5 MBOAT, membrane-bound O-acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 317.0
CMS3_k127_4932188_6 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000001535 209.0
CMS3_k127_4932188_7 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000002217 199.0
CMS3_k127_4932188_8 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000001003 146.0
CMS3_k127_4932188_9 Lipase maturation factor - - - 0.000000000000000000000000000009562 121.0
CMS3_k127_4988504_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.59e-265 837.0
CMS3_k127_4988504_1 Transport of potassium into the cell K03549 - - 3.768e-265 831.0
CMS3_k127_4988504_10 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
CMS3_k127_4988504_11 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 296.0
CMS3_k127_4988504_12 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007898 279.0
CMS3_k127_4988504_13 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000004405 220.0
CMS3_k127_4988504_14 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.000000000000000000000000000000000000000000000000001762 189.0
CMS3_k127_4988504_15 TIGRFAM MJ0042 family finger-like protein - - - 0.0000000000000000000000000000000000000000000000005073 186.0
CMS3_k127_4988504_16 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000001627 171.0
CMS3_k127_4988504_17 PFAM CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000006375 143.0
CMS3_k127_4988504_18 Thioredoxin-like domain - - - 0.000000000000000000000000000007969 126.0
CMS3_k127_4988504_2 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 6.745e-245 761.0
CMS3_k127_4988504_3 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 524.0
CMS3_k127_4988504_4 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 516.0
CMS3_k127_4988504_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 423.0
CMS3_k127_4988504_6 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 363.0
CMS3_k127_4988504_7 HemY protein N-terminus K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 330.0
CMS3_k127_4988504_8 synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 316.0
CMS3_k127_4988504_9 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 323.0
CMS3_k127_5031653_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1080.0
CMS3_k127_5031653_1 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000008731 225.0
CMS3_k127_5031653_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008150,GO:0008152,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030001,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0051179,GO:0051234,GO:0055114,GO:0098796,GO:1902494 1.6.5.8 0.000000000000000000000000000000000000000000000000000000001274 209.0
CMS3_k127_5031653_3 - - - - 0.00000000000000006659 92.0
CMS3_k127_5048778_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1044.0
CMS3_k127_5048778_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.656e-286 899.0
CMS3_k127_5048778_10 secreted protein - - - 0.0000000000001027 81.0
CMS3_k127_5048778_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 563.0
CMS3_k127_5048778_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 372.0
CMS3_k127_5048778_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001619 259.0
CMS3_k127_5048778_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000008318 196.0
CMS3_k127_5048778_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000003738 192.0
CMS3_k127_5048778_7 transcriptional - - - 0.00000000000000000000000000000000000000000000000001617 182.0
CMS3_k127_5048778_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000000000008039 182.0
CMS3_k127_5048778_9 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000303 96.0
CMS3_k127_5054637_0 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 475.0
CMS3_k127_5054637_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 468.0
CMS3_k127_5054637_10 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000008018 185.0
CMS3_k127_5054637_11 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000001064 181.0
CMS3_k127_5054637_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000002838 117.0
CMS3_k127_5054637_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 447.0
CMS3_k127_5054637_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 371.0
CMS3_k127_5054637_4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 371.0
CMS3_k127_5054637_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 365.0
CMS3_k127_5054637_6 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 358.0
CMS3_k127_5054637_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000005457 241.0
CMS3_k127_5054637_8 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 243.0
CMS3_k127_5054637_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000005165 207.0
CMS3_k127_5069795_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1640.0
CMS3_k127_5069795_1 4Fe-4S dicluster domain - - - 1.75e-235 747.0
CMS3_k127_5069795_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000006321 113.0
CMS3_k127_5069795_11 - - - - 0.000000000000433 75.0
CMS3_k127_5069795_12 - - - - 0.0000002959 56.0
CMS3_k127_5069795_2 4Fe-4S dicluster domain K00124,K07307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 399.0
CMS3_k127_5069795_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 378.0
CMS3_k127_5069795_4 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 352.0
CMS3_k127_5069795_5 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 344.0
CMS3_k127_5069795_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.1.99.22 0.0000000000000000000000000000000000000000000000000008459 191.0
CMS3_k127_5069795_7 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000001786 177.0
CMS3_k127_5069795_8 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000000004782 147.0
CMS3_k127_5069795_9 Protein of unknown function (DUF3306) - - - 0.0000000000000000000000000179 117.0
CMS3_k127_507177_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01120 - 3.1.4.17 3.748e-198 625.0
CMS3_k127_507177_1 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000009332 102.0
CMS3_k127_5071958_0 Multicopper oxidase K22349 - 1.16.3.3 0.0 1833.0
CMS3_k127_5071958_1 Multicopper oxidase K22349 - 1.16.3.3 1.094e-256 803.0
CMS3_k127_5071958_2 Multicopper oxidase K22349 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 308.0
CMS3_k127_510935_0 Aminotransferase K01845 - 5.4.3.8 2.583e-206 649.0
CMS3_k127_510935_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 497.0
CMS3_k127_510935_10 Rubredoxin - - - 0.000000000000000000000000000003805 119.0
CMS3_k127_510935_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 410.0
CMS3_k127_510935_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 394.0
CMS3_k127_510935_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 301.0
CMS3_k127_510935_5 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001368 254.0
CMS3_k127_510935_6 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000006801 235.0
CMS3_k127_510935_7 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000005745 231.0
CMS3_k127_510935_8 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000008381 224.0
CMS3_k127_510935_9 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000253 216.0
CMS3_k127_5110397_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.997e-205 651.0
CMS3_k127_5110397_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 405.0
CMS3_k127_5110397_2 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 287.0
CMS3_k127_5115602_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 2.368e-259 822.0
CMS3_k127_5115602_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000009198 112.0
CMS3_k127_5167265_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 3.921e-227 720.0
CMS3_k127_5167265_1 DegT/DnrJ/EryC1/StrS aminotransferase family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 518.0
CMS3_k127_5167265_10 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000001381 134.0
CMS3_k127_5167265_11 methyltransferase - - - 0.00000000000000000000001714 115.0
CMS3_k127_5167265_12 - - - - 0.00000000000001927 77.0
CMS3_k127_5167265_13 acetyltransferase - - - 0.0000000000009115 79.0
CMS3_k127_5167265_2 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 472.0
CMS3_k127_5167265_3 Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K20534 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 427.0
CMS3_k127_5167265_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 359.0
CMS3_k127_5167265_5 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 349.0
CMS3_k127_5167265_6 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 351.0
CMS3_k127_5167265_7 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 314.0
CMS3_k127_5167265_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 319.0
CMS3_k127_5167265_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000002982 182.0
CMS3_k127_5170675_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1107.0
CMS3_k127_5170675_1 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 536.0
CMS3_k127_5170675_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000000001276 179.0
CMS3_k127_5170675_11 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0000000000000000000000000000000000000000002994 161.0
CMS3_k127_5170675_12 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000007638 133.0
CMS3_k127_5170675_13 component of anaerobic dehydrogenases - - - 0.00000000000000000000000000000005685 135.0
CMS3_k127_5170675_14 Uncharacterized ACR, COG1993 - - - 0.000000000000000000000000000005831 122.0
CMS3_k127_5170675_15 Thioredoxin domain - - - 0.00000000000000000000000000006383 118.0
CMS3_k127_5170675_16 - - - - 0.00000000000000000002181 95.0
CMS3_k127_5170675_17 4Fe-4S binding domain - - - 0.000000000000000001041 99.0
CMS3_k127_5170675_18 PFAM cytoplasmic chaperone TorD family protein - - - 0.0000000000001543 80.0
CMS3_k127_5170675_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 539.0
CMS3_k127_5170675_3 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 516.0
CMS3_k127_5170675_4 PFAM ABC transporter K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 421.0
CMS3_k127_5170675_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K08358,K18362,K21308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 381.0
CMS3_k127_5170675_6 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 294.0
CMS3_k127_5170675_7 Molybdenum ABC transporter K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 290.0
CMS3_k127_5170675_8 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000002908 242.0
CMS3_k127_5170675_9 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000004151 190.0
CMS3_k127_5171561_0 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 364.0
CMS3_k127_5171561_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 304.0
CMS3_k127_5171561_2 SnoaL-like domain K01822 - 5.3.3.1 0.0000000000000000000000000000000000128 144.0
CMS3_k127_5171561_3 transport-associated - - - 0.0000000000000000001464 89.0
CMS3_k127_5171561_4 Chalcone isomerase-like - - - 0.00000000000000006234 81.0
CMS3_k127_5203482_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 513.0
CMS3_k127_5203482_1 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 454.0
CMS3_k127_5203482_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 305.0
CMS3_k127_5203482_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008363 266.0
CMS3_k127_5203482_4 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007589 244.0
CMS3_k127_5203482_5 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000000000385 229.0
CMS3_k127_5203482_6 - - - - 0.000000000000003178 87.0
CMS3_k127_5203482_7 - - - - 0.00000000000007295 79.0
CMS3_k127_5212844_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 2.068e-298 926.0
CMS3_k127_5212844_1 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 4.629e-246 762.0
CMS3_k127_5212844_2 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 504.0
CMS3_k127_5212844_3 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 492.0
CMS3_k127_5212844_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000002108 239.0
CMS3_k127_5212844_5 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000339 220.0
CMS3_k127_5212844_6 sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000000000004874 198.0
CMS3_k127_5212844_7 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000000001889 149.0
CMS3_k127_5218754_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 545.0
CMS3_k127_5218754_1 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 295.0
CMS3_k127_5218754_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000002463 228.0
CMS3_k127_5218754_3 PFAM OsmC family protein K07397 - - 0.00000000000000000000000000000000000000000000000000000000002632 209.0
CMS3_k127_5218754_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000002127 199.0
CMS3_k127_5218754_5 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000002324 198.0
CMS3_k127_5218754_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000004754 175.0
CMS3_k127_5218754_7 - - - - 0.00000000000000000000000000000000000000000003026 173.0
CMS3_k127_5218754_8 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000007842 80.0
CMS3_k127_526915_0 2-Nitropropane dioxygenase K00459 - 1.13.12.16 3.171e-224 709.0
CMS3_k127_526915_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 556.0
CMS3_k127_526915_10 response to heat K03668 - - 0.0000000003628 68.0
CMS3_k127_526915_2 abc transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 389.0
CMS3_k127_526915_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 362.0
CMS3_k127_526915_4 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 344.0
CMS3_k127_526915_5 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 326.0
CMS3_k127_526915_6 Cellulose biosynthesis protein BcsG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 313.0
CMS3_k127_526915_7 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002321 266.0
CMS3_k127_526915_8 Protein of unknown function (DUF3617) - - - 0.000000000000000003052 91.0
CMS3_k127_526915_9 - - - - 0.00000000000000001002 84.0
CMS3_k127_5279879_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 3.846e-221 694.0
CMS3_k127_5279879_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 475.0
CMS3_k127_5279879_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 469.0
CMS3_k127_5279879_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 385.0
CMS3_k127_5279879_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000003868 200.0
CMS3_k127_5279879_5 Colicin V production K03558 - - 0.00000000000000000000000000000000000001199 151.0
CMS3_k127_5279879_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000002626 142.0
CMS3_k127_5279879_7 Sporulation related domain K03749 - - 0.0000000000000000000000000000000002644 143.0
CMS3_k127_5288755_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1764.0
CMS3_k127_5288755_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1070.0
CMS3_k127_5288755_2 Belongs to the CarA family K01956 - 6.3.5.5 8.639e-194 611.0
CMS3_k127_5288755_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007507 268.0
CMS3_k127_5288755_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
CMS3_k127_5288755_5 Domain of unknown function (DUF4149) - - - 0.000000000000000000000000000000000000004618 151.0
CMS3_k127_5288755_6 RNA-binding protein containing KH domain possibly ribosomal protein - - - 0.00000000000000000000000002606 112.0
CMS3_k127_5288755_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000002438 66.0
CMS3_k127_5344219_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 2.667e-307 947.0
CMS3_k127_5344219_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.199e-283 886.0
CMS3_k127_5344219_10 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000006193 228.0
CMS3_k127_5344219_11 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000009284 219.0
CMS3_k127_5344219_12 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000002431 76.0
CMS3_k127_5344219_2 pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 2.115e-212 665.0
CMS3_k127_5344219_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K18356 - 1.2.1.58,1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 573.0
CMS3_k127_5344219_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 404.0
CMS3_k127_5344219_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 361.0
CMS3_k127_5344219_6 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 343.0
CMS3_k127_5344219_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001246 272.0
CMS3_k127_5344219_8 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000006235 265.0
CMS3_k127_5344219_9 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000007127 244.0
CMS3_k127_5348270_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 604.0
CMS3_k127_5348270_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 552.0
CMS3_k127_5348270_2 pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 414.0
CMS3_k127_5348270_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 366.0
CMS3_k127_5348270_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000006622 194.0
CMS3_k127_5348270_5 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.00000000000000000000000007045 115.0
CMS3_k127_5356201_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1368.0
CMS3_k127_5356201_1 UvrD REP K03657 - 3.6.4.12 0.0 1014.0
CMS3_k127_5356201_10 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000008181 125.0
CMS3_k127_5356201_11 methyltransferase - - - 0.0000000000001318 72.0
CMS3_k127_5356201_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.616e-253 794.0
CMS3_k127_5356201_3 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 475.0
CMS3_k127_5356201_4 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 404.0
CMS3_k127_5356201_5 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 379.0
CMS3_k127_5356201_6 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 365.0
CMS3_k127_5356201_7 - - - - 0.000000000000000000000000000000000000000000000000019 192.0
CMS3_k127_5356201_8 - - - - 0.000000000000000000000000000000000000000000006961 187.0
CMS3_k127_5356201_9 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000001666 154.0
CMS3_k127_5367716_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 1.258e-220 698.0
CMS3_k127_5367716_1 TIGRFAM SagB-type dehydrogenase domain - - - 1.675e-210 667.0
CMS3_k127_5367716_10 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.00000000000000000000000000000000000000000000000000000000007427 210.0
CMS3_k127_5367716_11 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis - - - 0.00000000000000000000000000000000000000000000000000005273 191.0
CMS3_k127_5367716_12 ferredoxin - - - 0.0000000000000000000000000000000000000000000000002654 177.0
CMS3_k127_5367716_13 VanZ like family - - - 0.00000000000000000000000000000000000000000000000145 188.0
CMS3_k127_5367716_14 Redoxin - - - 0.00000000000000000000000000000000000000008323 162.0
CMS3_k127_5367716_15 - - - - 0.000000000000000000000000000002905 128.0
CMS3_k127_5367716_16 - - - - 0.0000000000000000000000000005893 121.0
CMS3_k127_5367716_17 - - - - 0.0000000000000000000001563 111.0
CMS3_k127_5367716_18 - - - - 0.0003371 47.0
CMS3_k127_5367716_2 twitching motility protein K02670 - - 5.365e-198 625.0
CMS3_k127_5367716_3 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 466.0
CMS3_k127_5367716_4 PFAM ABC transporter related K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 457.0
CMS3_k127_5367716_5 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 422.0
CMS3_k127_5367716_6 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 361.0
CMS3_k127_5367716_7 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 364.0
CMS3_k127_5367716_8 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002466 280.0
CMS3_k127_5367716_9 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001961 244.0
CMS3_k127_5447872_0 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 8.23e-245 767.0
CMS3_k127_5447872_1 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 433.0
CMS3_k127_5447872_2 - - - - 0.0000000000000000000000001272 107.0
CMS3_k127_5447872_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000001196 85.0
CMS3_k127_5470711_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 7.867e-282 885.0
CMS3_k127_5470711_1 Biotin carboxylase C-terminal domain K01965,K01968,K13777 - 6.4.1.3,6.4.1.4,6.4.1.5 1.978e-281 879.0
CMS3_k127_5470711_2 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 552.0
CMS3_k127_5470711_3 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 437.0
CMS3_k127_5470711_4 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 315.0
CMS3_k127_5470711_5 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000081 248.0
CMS3_k127_5470711_6 Protein of unknown function (DUF1289) K06938 - - 0.0000000000307 72.0
CMS3_k127_548561_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1227.0
CMS3_k127_548561_1 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 7.613e-271 844.0
CMS3_k127_548561_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 7.987e-227 711.0
CMS3_k127_548561_3 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 301.0
CMS3_k127_548561_4 cytochrome c-type protein K02569 - - 0.000000000000000000000000000000000000000000000000000000000000001361 226.0
CMS3_k127_548561_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000002005 166.0
CMS3_k127_548561_6 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000002114 51.0
CMS3_k127_5491144_0 Sigma-54 interaction domain - - - 4.37e-196 624.0
CMS3_k127_5491144_1 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 417.0
CMS3_k127_5491144_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 392.0
CMS3_k127_5491144_3 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002456 248.0
CMS3_k127_5491144_4 Protein of unknown function DUF72 - - - 0.000000000000000003837 95.0
CMS3_k127_5501732_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 6.272e-305 947.0
CMS3_k127_5501732_1 DNA polymerase III K02342 - 2.7.7.7 1.133e-247 786.0
CMS3_k127_5501732_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 1.852e-227 720.0
CMS3_k127_5501732_3 Alginate export K16081 - - 0.0000000000000000000000000000000000000000000000000000000000000001303 239.0
CMS3_k127_5501732_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000001853 158.0
CMS3_k127_5501732_5 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000000000004488 135.0
CMS3_k127_5501732_6 cheY-homologous receiver domain - - - 0.0000000000000000000000009534 104.0
CMS3_k127_5501732_7 - - - - 0.00000000000000000001517 94.0
CMS3_k127_5501732_8 Recombinase zinc beta ribbon domain - - - 0.00000001519 59.0
CMS3_k127_5526215_0 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042401,GO:0042710,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044010,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044764,GO:0045312,GO:0046204,GO:0046983,GO:0048037,GO:0050662,GO:0051704,GO:0070279,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 553.0
CMS3_k127_5526215_1 Arginase family K01476,K01479,K01480,K12255,K18459 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008783,GO:0009058,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0030145,GO:0034641,GO:0042401,GO:0043167,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 393.0
CMS3_k127_5550413_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001053 283.0
CMS3_k127_5550413_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000005513 232.0
CMS3_k127_5550413_2 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.00000000000000000000000000000000000000000000000000000001531 199.0
CMS3_k127_5550413_3 ferredoxin-type protein napF K02572 - - 0.000000000000000000000000000000000000000000000001138 179.0
CMS3_k127_5550413_4 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.000000000000000000000000006638 114.0
CMS3_k127_5550413_5 negative regulation of establishment of protein localization K02570 - - 0.0000000000000000001984 91.0
CMS3_k127_556670_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 8.407e-309 953.0
CMS3_k127_556670_1 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 7.525e-204 638.0
CMS3_k127_556670_10 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000001924 106.0
CMS3_k127_556670_11 HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.0000002518 54.0
CMS3_k127_556670_2 NnrS protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 358.0
CMS3_k127_556670_3 b-type cytochrome subunit K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 291.0
CMS3_k127_556670_4 Hydrogenase expression formation protein K03605 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002497 244.0
CMS3_k127_556670_5 - - - - 0.00000000000000000000000000000000000000000000000000004562 198.0
CMS3_k127_556670_6 protein conserved in bacteria K09790 - - 0.0000000000000000000000000000000000000000002986 162.0
CMS3_k127_556670_7 Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000000000000000252 160.0
CMS3_k127_556670_8 Helix-turn-helix K21498 - - 0.000000000000000000000000000004316 123.0
CMS3_k127_556670_9 Hydrogenase-1 expression protein HyaE - - - 0.000000000000000000000000003961 118.0
CMS3_k127_5595433_0 Molybdopterin oxidoreductase Fe4S4 domain K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1131.0
CMS3_k127_5595433_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.558e-205 644.0
CMS3_k127_5595433_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 507.0
CMS3_k127_5595433_3 ACT domain - - - 0.00000000000000000000000000000000000000000000000000000000002433 211.0
CMS3_k127_5595433_4 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000003505 211.0
CMS3_k127_5595433_5 Predicted integral membrane protein (DUF2189) - - - 0.000003014 53.0
CMS3_k127_5595433_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.0006108 48.0
CMS3_k127_5651231_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 509.0
CMS3_k127_5651231_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 495.0
CMS3_k127_5651231_10 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000003701 186.0
CMS3_k127_5651231_11 cytochrome c5 - - - 0.0000000000000000000000000006076 116.0
CMS3_k127_5651231_12 Histidine kinase - - - 0.000000000000000218 94.0
CMS3_k127_5651231_13 Sulfatase - - - 0.0006972 44.0
CMS3_k127_5651231_2 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 361.0
CMS3_k127_5651231_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 340.0
CMS3_k127_5651231_4 Bacterial protein of unknown function (DUF839) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 334.0
CMS3_k127_5651231_5 NUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002381 264.0
CMS3_k127_5651231_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000001278 244.0
CMS3_k127_5651231_7 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000249 229.0
CMS3_k127_5651231_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000006707 205.0
CMS3_k127_5651231_9 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000009625 183.0
CMS3_k127_5678360_0 Methylmalonyl-CoA mutase large subunit K01847 - 5.4.99.2 0.0 1047.0
CMS3_k127_5678360_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 545.0
CMS3_k127_5678360_2 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 301.0
CMS3_k127_5678360_3 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000452 172.0
CMS3_k127_569069_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 453.0
CMS3_k127_569069_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 387.0
CMS3_k127_569069_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 357.0
CMS3_k127_569069_3 Cell division ATP-binding protein ftsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 317.0
CMS3_k127_569069_4 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000005339 162.0
CMS3_k127_569069_5 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000002961 157.0
CMS3_k127_5701450_0 response regulator receiver K13041 - - 0.000000000000000000000000000000000000000000000000000000003521 208.0
CMS3_k127_5701450_1 Signal transduction histidine kinase K11711 - 2.7.13.3 0.000000000000000000000000000000000006114 141.0
CMS3_k127_5701450_2 PFAM Cytochrome c assembly protein - - - 0.0000000000000000111 94.0
CMS3_k127_571904_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.066e-230 724.0
CMS3_k127_571904_1 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 474.0
CMS3_k127_571904_10 ApaG domain - - - 0.000000000000000000000000000000000000000000000000000000003922 202.0
CMS3_k127_571904_11 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000001121 159.0
CMS3_k127_571904_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 458.0
CMS3_k127_571904_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 415.0
CMS3_k127_571904_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 411.0
CMS3_k127_571904_5 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 346.0
CMS3_k127_571904_6 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 330.0
CMS3_k127_571904_7 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 325.0
CMS3_k127_571904_8 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000007039 259.0
CMS3_k127_571904_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000004864 232.0
CMS3_k127_572262_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 7.312e-318 979.0
CMS3_k127_572262_1 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 - 6.3.4.5 3.049e-213 667.0
CMS3_k127_572262_2 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 1.23e-197 621.0
CMS3_k127_572262_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 522.0
CMS3_k127_572262_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000000001781 181.0
CMS3_k127_572262_5 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000000003688 117.0
CMS3_k127_572262_6 Belongs to the UPF0234 family K09767 - - 0.00000000000000000009708 100.0
CMS3_k127_5723758_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00244 - 1.3.5.4 1.74e-240 751.0
CMS3_k127_5723758_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 7.002e-217 687.0
CMS3_k127_5723758_2 TIGRFAM Succinate dehydrogenase fumarate reductase iron-sulphur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 390.0
CMS3_k127_5723758_3 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003973 251.0
CMS3_k127_5723758_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000004671 219.0
CMS3_k127_5735151_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 565.0
CMS3_k127_5735151_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 469.0
CMS3_k127_5735151_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008208 271.0
CMS3_k127_5778708_0 NADPH-dependent glutamate synthase beta - - - 1.163e-305 949.0
CMS3_k127_5778708_1 Fe-S oxidoreductase K21834 - - 1.651e-262 815.0
CMS3_k127_5778708_2 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 512.0
CMS3_k127_5778708_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 351.0
CMS3_k127_5778708_4 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 312.0
CMS3_k127_5778708_5 - - - - 0.0000000000000000000000000000005967 126.0
CMS3_k127_5778708_6 PFAM Nitrate reductase gamma subunit - - - 0.0000000000005186 68.0
CMS3_k127_5782486_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 9.538e-244 757.0
CMS3_k127_5782486_1 Histidine kinase K02482 - 2.7.13.3 2.683e-232 738.0
CMS3_k127_5782486_2 FAD-dependent pyridine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 515.0
CMS3_k127_5782486_3 Mut7-C ubiquitin - - - 0.0000000000000000000000000001977 117.0
CMS3_k127_5782486_5 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000003951 64.0
CMS3_k127_5817706_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 4.242e-243 776.0
CMS3_k127_5817706_1 PFAM NAD-dependent epimerase dehydratase K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 466.0
CMS3_k127_5817706_10 - - - - 0.0000000000000000000000004508 115.0
CMS3_k127_5817706_11 PFAM FMN-binding domain protein K19339 - - 0.0000002377 54.0
CMS3_k127_5817706_12 - - - - 0.000238 52.0
CMS3_k127_5817706_2 PFAM FMN-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 395.0
CMS3_k127_5817706_3 FMN-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 329.0
CMS3_k127_5817706_4 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000000000000001558 238.0
CMS3_k127_5817706_5 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000004591 224.0
CMS3_k127_5817706_6 PFAM Cupin 2, conserved barrel domain protein K11312 - - 0.00000000000000000000000000000000000002592 146.0
CMS3_k127_5817706_7 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000008352 127.0
CMS3_k127_5817706_8 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000000000000000003799 127.0
CMS3_k127_5817706_9 Protein of unknown function (DUF3568) - - - 0.0000000000000000000000002686 109.0
CMS3_k127_5821736_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1056.0
CMS3_k127_5821736_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.401e-228 719.0
CMS3_k127_5821736_2 Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 570.0
CMS3_k127_5821736_3 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007622 280.0
CMS3_k127_5821736_4 Transferase hexapeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001704 240.0
CMS3_k127_5821736_5 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000952 202.0
CMS3_k127_5821736_6 Haem-degrading - - - 0.0000000000000000000000000000000000000000004497 173.0
CMS3_k127_5821736_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000003005 114.0
CMS3_k127_5821736_8 - - - - 0.0000000000000000000006816 100.0
CMS3_k127_5821736_9 - - - - 0.00000000000000000001407 92.0
CMS3_k127_5853966_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.728e-281 873.0
CMS3_k127_5853966_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.652e-219 689.0
CMS3_k127_5853966_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 360.0
CMS3_k127_5853966_3 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.0000000000000000000000000000000000000000000000000001035 190.0
CMS3_k127_5853966_4 - - - - 0.0000000000000000000000009975 109.0
CMS3_k127_5853966_5 - - - - 0.0000000000000000002253 91.0
CMS3_k127_5858063_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 4.207e-294 911.0
CMS3_k127_5858063_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 3.706e-216 683.0
CMS3_k127_5858063_10 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000003461 261.0
CMS3_k127_5858063_11 beta-lactamase activity K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000002901 241.0
CMS3_k127_5858063_12 membrane - - - 0.00000000000000000000000000000000000000000000003309 173.0
CMS3_k127_5858063_13 PFAM LemA family K03744 - - 0.0000000000000000000000000000000000000000000009477 181.0
CMS3_k127_5858063_14 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000001081 152.0
CMS3_k127_5858063_15 - - - - 0.0000000000000000000000002732 113.0
CMS3_k127_5858063_16 Protein of unknown function (DUF3179) - - - 0.00000000000000000004171 93.0
CMS3_k127_5858063_18 - - - - 0.000006032 54.0
CMS3_k127_5858063_2 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008096 481.0
CMS3_k127_5858063_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 402.0
CMS3_k127_5858063_4 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 348.0
CMS3_k127_5858063_5 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 339.0
CMS3_k127_5858063_6 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 323.0
CMS3_k127_5858063_7 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 316.0
CMS3_k127_5858063_8 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 295.0
CMS3_k127_5858063_9 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001315 274.0
CMS3_k127_5875883_0 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 459.0
CMS3_k127_5875883_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 398.0
CMS3_k127_5875883_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 286.0
CMS3_k127_5875883_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000002731 239.0
CMS3_k127_58802_0 Mechanosensitive ion channel - - - 7.042e-225 734.0
CMS3_k127_58802_1 PFAM multicopper oxidase type 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 599.0
CMS3_k127_58802_2 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000006783 238.0
CMS3_k127_58802_3 Domain of unknown function (DUF2703) - - - 0.000000000000000000000000000000000000000000000005951 175.0
CMS3_k127_58802_4 - - - - 0.0000000000000000000000000000000002202 138.0
CMS3_k127_58802_5 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000009994 132.0
CMS3_k127_58802_6 - - - - 0.000000000000000000000000001864 125.0
CMS3_k127_58802_7 - - - - 0.00000000000000000000001849 113.0
CMS3_k127_58802_8 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03789,K03790,K03896 - 2.3.1.102,2.3.1.128 0.0000000000001077 73.0
CMS3_k127_5888170_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.496e-289 895.0
CMS3_k127_5888170_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 3.304e-275 856.0
CMS3_k127_5888170_10 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000000000001254 135.0
CMS3_k127_5888170_2 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 558.0
CMS3_k127_5888170_3 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 414.0
CMS3_k127_5888170_4 Bacterial extracellular solute-binding proteins, family 3 K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 387.0
CMS3_k127_5888170_5 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 391.0
CMS3_k127_5888170_6 response regulator K02483,K07666,K07774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 332.0
CMS3_k127_5888170_7 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000008942 181.0
CMS3_k127_5888170_8 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000003327 179.0
CMS3_k127_5888170_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000003453 170.0
CMS3_k127_5905394_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.83e-229 715.0
CMS3_k127_5905394_1 dehydrogenase, E1 component K00164 - 1.2.4.2 2.724e-228 716.0
CMS3_k127_5905394_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.517e-220 691.0
CMS3_k127_5905394_3 succinate dehydrogenase fumarate reductase K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 443.0
CMS3_k127_5905394_4 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000000001203 82.0
CMS3_k127_5925781_0 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003951 276.0
CMS3_k127_5925781_1 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007531 271.0
CMS3_k127_5925781_2 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001539 240.0
CMS3_k127_5925781_3 17 kDa surface antigen - - - 0.00000000000000000000000000000000000000000000000007841 189.0
CMS3_k127_5925781_4 - - - - 0.000000000000000000000000000000000000000000000001407 177.0
CMS3_k127_5925781_5 - - - - 0.0000000761 63.0
CMS3_k127_5925781_6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0007442 43.0
CMS3_k127_5932919_0 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000004263 131.0
CMS3_k127_5932919_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000002753 105.0
CMS3_k127_5932919_2 Surface antigen - - - 0.0000214 55.0
CMS3_k127_5940394_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 497.0
CMS3_k127_5940394_1 Von Willebrand factor A K09989 - - 0.000000000000000000000000000000000000000001769 157.0
CMS3_k127_5940394_2 Diguanylate cyclase - - - 0.0000000000000000009187 96.0
CMS3_k127_5945990_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 466.0
CMS3_k127_5945990_1 protein synthesis factor, GTP-binding K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 450.0
CMS3_k127_5945990_2 periplasmic protein - - - 0.00000000000000005167 94.0
CMS3_k127_5954234_0 acyl-CoA dehydrogenase K06445 - - 0.0 1067.0
CMS3_k127_5954234_1 Acyl-CoA dehydrogenase N terminal K20035 - - 3.218e-255 799.0
CMS3_k127_5954234_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001608 238.0
CMS3_k127_5954234_11 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000000002909 196.0
CMS3_k127_5954234_2 AMP-binding enzyme K01897 - 6.2.1.3 1.112e-238 752.0
CMS3_k127_5954234_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 485.0
CMS3_k127_5954234_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 436.0
CMS3_k127_5954234_5 Electron transfer flavoprotein alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 429.0
CMS3_k127_5954234_6 Enoyl-CoA hydratase/isomerase K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 396.0
CMS3_k127_5954234_7 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 392.0
CMS3_k127_5954234_8 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 365.0
CMS3_k127_5954234_9 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000005461 254.0
CMS3_k127_5974915_0 Domain of Unknown Function (DUF748) - - - 5.238e-226 733.0
CMS3_k127_5974915_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 6.15e-202 644.0
CMS3_k127_5974915_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001362 263.0
CMS3_k127_599454_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 499.0
CMS3_k127_599454_1 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009769 419.0
CMS3_k127_599454_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 394.0
CMS3_k127_599454_3 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003568 244.0
CMS3_k127_599454_4 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000001072 221.0
CMS3_k127_6020276_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 556.0
CMS3_k127_6020276_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 321.0
CMS3_k127_6020276_2 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 314.0
CMS3_k127_6020276_3 - - - - 0.00000000000000000000000000000000000000000006333 169.0
CMS3_k127_6020276_4 TIR domain - - - 0.000000000000000000000000000000005601 147.0
CMS3_k127_6033662_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 2.527e-202 635.0
CMS3_k127_6033662_1 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 572.0
CMS3_k127_6033662_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 364.0
CMS3_k127_6033662_11 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 331.0
CMS3_k127_6033662_12 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 323.0
CMS3_k127_6033662_13 membrane-bound metal-dependent K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 310.0
CMS3_k127_6033662_14 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001241 269.0
CMS3_k127_6033662_15 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 265.0
CMS3_k127_6033662_16 Glycine zipper - - - 0.0000000000000000000000000000000000000000000000000000825 193.0
CMS3_k127_6033662_17 - - - - 0.00000000000000000000000000000000000000000000000001234 184.0
CMS3_k127_6033662_18 SWI complex, BAF60b domains - - - 0.000000000000000000000000000000000001875 143.0
CMS3_k127_6033662_19 - - - - 0.00000000000000000000000000000000000461 136.0
CMS3_k127_6033662_2 Isocitrate/isopropylmalate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 567.0
CMS3_k127_6033662_20 Peptidase S24-like - - - 0.000000000000000000000000000000001192 133.0
CMS3_k127_6033662_21 - - - - 0.00000000000000000001036 98.0
CMS3_k127_6033662_23 - - - - 0.000000000001045 72.0
CMS3_k127_6033662_25 DNAJ heat shock N-terminal domain-containing protein - - - 0.0001328 54.0
CMS3_k127_6033662_3 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 532.0
CMS3_k127_6033662_4 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 519.0
CMS3_k127_6033662_5 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 501.0
CMS3_k127_6033662_6 D-amino acid dehydrogenase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 497.0
CMS3_k127_6033662_7 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 467.0
CMS3_k127_6033662_8 Alpha/beta hydrolase of unknown function (DUF915) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 413.0
CMS3_k127_6033662_9 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 365.0
CMS3_k127_604746_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.604e-221 692.0
CMS3_k127_604746_1 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 606.0
CMS3_k127_604746_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 491.0
CMS3_k127_604746_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 469.0
CMS3_k127_604746_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005361 277.0
CMS3_k127_604746_5 Lumazine binding domain K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001487 265.0
CMS3_k127_604746_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000001106 233.0
CMS3_k127_604746_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000006769 183.0
CMS3_k127_6069079_0 Multicopper oxidase K22349 - 1.16.3.3 0.0 1868.0
CMS3_k127_6069079_1 Multicopper oxidase K22349 - 1.16.3.3 0.0 1828.0
CMS3_k127_6069079_10 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000000000000000001978 198.0
CMS3_k127_6069079_11 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000002883 192.0
CMS3_k127_6069079_12 SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000002043 166.0
CMS3_k127_6069079_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 1.116e-218 696.0
CMS3_k127_6069079_3 Cytochrome D1 heme domain - - - 1.908e-194 627.0
CMS3_k127_6069079_4 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 436.0
CMS3_k127_6069079_5 MASE1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 322.0
CMS3_k127_6069079_6 SCO1/SenC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003808 244.0
CMS3_k127_6069079_7 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001847 248.0
CMS3_k127_6069079_8 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000004915 248.0
CMS3_k127_6069079_9 Flagellar regulatory protein FleQ - - - 0.000000000000000000000000000000000000000000000000000000003149 212.0
CMS3_k127_6076414_0 Protein of unknown function (DUF3141) - - - 0.0 1038.0
CMS3_k127_6076414_1 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625,K00634 - 2.3.1.19,2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 551.0
CMS3_k127_6076414_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 522.0
CMS3_k127_6076414_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 507.0
CMS3_k127_6076414_4 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 439.0
CMS3_k127_6076414_5 methionine sulfoxide reductase K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000003289 259.0
CMS3_k127_6076414_6 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000006272 199.0
CMS3_k127_6076414_7 YMGG-like Gly-zipper - - - 0.000000000000000000000000000000000000000000000268 173.0
CMS3_k127_6076414_8 - - - - 0.000000000000000000000000004805 117.0
CMS3_k127_6076414_9 - - - - 0.0000000000002882 80.0
CMS3_k127_6079693_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 539.0
CMS3_k127_6079693_1 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 530.0
CMS3_k127_6079693_10 protein conserved in bacteria - - - 0.00000000000000000002422 96.0
CMS3_k127_6079693_11 Domain of unknown function (DUF4389) - - - 0.00000000000000000002657 95.0
CMS3_k127_6079693_12 Lysophospholipase L1 and related esterases - GO:0006629,GO:0008150,GO:0008152,GO:0009056,GO:0016042,GO:0044238,GO:0071704,GO:1901575 - 0.00000001456 65.0
CMS3_k127_6079693_2 PFAM ROK family protein K00845,K00847 - 2.7.1.2,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 413.0
CMS3_k127_6079693_3 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 389.0
CMS3_k127_6079693_4 PFAM lactate malate dehydrogenase, alpha beta C-terminal domain K00016 - 1.1.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 335.0
CMS3_k127_6079693_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 296.0
CMS3_k127_6079693_6 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003936 279.0
CMS3_k127_6079693_7 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000002073 236.0
CMS3_k127_6079693_8 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000002977 221.0
CMS3_k127_6079693_9 MazG-like family - - - 0.000000000000000000000000000000000000007979 149.0
CMS3_k127_6086389_0 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 586.0
CMS3_k127_6086389_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000007877 214.0
CMS3_k127_6086389_2 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000893 189.0
CMS3_k127_6116187_0 COG1020 Non-ribosomal peptide synthetase modules and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 383.0
CMS3_k127_6116187_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001582 279.0
CMS3_k127_6116187_2 Bacterial transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000004734 197.0
CMS3_k127_6116187_3 Patatin-like phospholipase - - - 0.0000000000000000000000000000002241 126.0
CMS3_k127_613641_0 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000009266 157.0
CMS3_k127_613641_1 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000006061 142.0
CMS3_k127_613641_2 Thioredoxin-like - - - 0.00000000000000000000000001552 114.0
CMS3_k127_6143082_0 Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism K00372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 570.0
CMS3_k127_6143082_1 Putative beta-barrel porin 2 - - - 0.000000000000000000000000000000000000000000000000000000000003667 226.0
CMS3_k127_6143082_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000003025 156.0
CMS3_k127_6143082_3 DNA-binding transcription factor activity K01420 - - 0.000000000000000000004321 103.0
CMS3_k127_6143082_4 - - - - 0.000004992 56.0
CMS3_k127_6151732_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 535.0
CMS3_k127_6151732_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 372.0
CMS3_k127_6151732_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 315.0
CMS3_k127_6151732_3 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000003316 222.0
CMS3_k127_6151732_4 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000005997 111.0
CMS3_k127_6157997_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 337.0
CMS3_k127_6157997_1 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001364 276.0
CMS3_k127_6157997_2 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 259.0
CMS3_k127_6157997_3 Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose K00523 - 1.17.1.1 0.000000000001055 69.0
CMS3_k127_6158546_0 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 1.741e-274 857.0
CMS3_k127_6158546_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 1.652e-246 777.0
CMS3_k127_6158546_10 ATP synthase subunit C K02124 - - 0.0000000000000000000000000000000000000000008985 161.0
CMS3_k127_6158546_11 Produces ATP from ADP in the presence of a proton gradient across the membrane - - - 0.00000000000000000000000000007505 119.0
CMS3_k127_6158546_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 578.0
CMS3_k127_6158546_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 331.0
CMS3_k127_6158546_4 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 314.0
CMS3_k127_6158546_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009936 298.0
CMS3_k127_6158546_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005135 280.0
CMS3_k127_6158546_7 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001317 256.0
CMS3_k127_6158546_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000001242 232.0
CMS3_k127_6158546_9 V-type proton ATPase subunit E K02121 - - 0.0000000000000000000000000000000000000000000000000000000003297 212.0
CMS3_k127_6256249_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1739.0
CMS3_k127_6256249_1 poly(R)-hydroxyalkanoic acid synthase K03821 - - 9.814e-275 858.0
CMS3_k127_6256249_10 ABC-type amino acid transport signal transduction systems periplasmic component domain K10001 GO:0003333,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015740,GO:0015800,GO:0015807,GO:0015813,GO:0015849,GO:0015893,GO:0016595,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0034220,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070335,GO:0070778,GO:0071702,GO:0071705,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000006495 220.0
CMS3_k127_6256249_11 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000007895 190.0
CMS3_k127_6256249_12 transcriptional - - - 0.0000000000000000000000000000000000002278 148.0
CMS3_k127_6256249_13 - - - - 0.000000000000000000000000002442 119.0
CMS3_k127_6256249_14 Phospholipase_D-nuclease N-terminal - - - 0.0000000000000001211 81.0
CMS3_k127_6256249_2 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.502e-218 680.0
CMS3_k127_6256249_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 596.0
CMS3_k127_6256249_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 396.0
CMS3_k127_6256249_5 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 388.0
CMS3_k127_6256249_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 369.0
CMS3_k127_6256249_7 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 314.0
CMS3_k127_6256249_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003045 290.0
CMS3_k127_6256249_9 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000002368 229.0
CMS3_k127_6266475_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1228.0
CMS3_k127_6266475_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1026.0
CMS3_k127_6266475_10 Domain of unknown function (DUF3391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 319.0
CMS3_k127_6266475_11 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 315.0
CMS3_k127_6266475_12 MucB/RseB C-terminal domain K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005823 287.0
CMS3_k127_6266475_13 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001401 258.0
CMS3_k127_6266475_14 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000004447 230.0
CMS3_k127_6266475_15 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000000000002257 129.0
CMS3_k127_6266475_16 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000009422 118.0
CMS3_k127_6266475_17 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000000003485 112.0
CMS3_k127_6266475_18 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000004107 94.0
CMS3_k127_6266475_19 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.000000000000000000005543 102.0
CMS3_k127_6266475_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 7.054e-287 889.0
CMS3_k127_6266475_20 Domain of unknown function (DUF4845) - - - 0.00000000000000003571 89.0
CMS3_k127_6266475_21 - K19168 - - 0.00000002962 61.0
CMS3_k127_6266475_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.622e-266 829.0
CMS3_k127_6266475_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 2.426e-227 709.0
CMS3_k127_6266475_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 1.059e-198 631.0
CMS3_k127_6266475_6 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 468.0
CMS3_k127_6266475_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 393.0
CMS3_k127_6266475_8 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 382.0
CMS3_k127_6266475_9 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 334.0
CMS3_k127_6278610_0 MlaD protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 386.0
CMS3_k127_6278610_1 ABC-type transport auxiliary lipoprotein component - - - 0.000000000000000000000000000000000000000000000000000000000000000000001055 244.0
CMS3_k127_6278610_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000002796 194.0
CMS3_k127_6278610_3 Pseudouridine synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000005602 155.0
CMS3_k127_6278610_4 Las17-binding protein actin regulator - - - 0.0000000000000000000000000001298 122.0
CMS3_k127_6278610_5 - - - - 0.00000000000000000000000000461 114.0
CMS3_k127_6279066_0 CoA-binding domain protein K09181 - - 0.0 1011.0
CMS3_k127_6279066_1 Aminotransferase K14261 - - 3.111e-210 659.0
CMS3_k127_6279066_2 histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 449.0
CMS3_k127_6279066_3 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 363.0
CMS3_k127_6279066_4 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 294.0
CMS3_k127_6279066_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000445 253.0
CMS3_k127_6279066_6 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000002777 136.0
CMS3_k127_6279066_7 Putative diguanylate phosphodiesterase - - - 0.00000000000000000001855 108.0
CMS3_k127_6303891_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 3.177e-321 996.0
CMS3_k127_6303891_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000006366 193.0
CMS3_k127_6304551_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 591.0
CMS3_k127_6304551_1 of murein hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 310.0
CMS3_k127_6304551_10 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000005515 83.0
CMS3_k127_6304551_11 - - - - 0.00000000002181 68.0
CMS3_k127_6304551_12 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0006536 51.0
CMS3_k127_6304551_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 306.0
CMS3_k127_6304551_3 PFAM 20S proteasome, A and B subunits K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000576 270.0
CMS3_k127_6304551_4 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008361 243.0
CMS3_k127_6304551_5 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000005602 229.0
CMS3_k127_6304551_6 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000001312 202.0
CMS3_k127_6304551_7 dicarboxylic acid transport K02030,K11102 - - 0.0000000000000000000000000000000000000000006017 167.0
CMS3_k127_6304551_8 Phasin protein - - - 0.000000000000000000000000000000000001831 144.0
CMS3_k127_6304551_9 LrgA family K06518 - - 0.00000000000000000000000000000006662 128.0
CMS3_k127_6313447_0 Transporter associated domain K03699 - - 5.343e-206 648.0
CMS3_k127_6313447_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 392.0
CMS3_k127_6313447_2 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002631 259.0
CMS3_k127_6313447_3 catechol 1,2-dioxygenase - - - 0.00000000000000000000000000003662 125.0
CMS3_k127_6313447_4 - - - - 0.0001126 49.0
CMS3_k127_6335683_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 2.93e-197 623.0
CMS3_k127_6335683_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 506.0
CMS3_k127_6335683_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 489.0
CMS3_k127_6335683_3 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 387.0
CMS3_k127_6335683_4 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 327.0
CMS3_k127_6335683_5 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 315.0
CMS3_k127_6335683_6 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000005826 260.0
CMS3_k127_6335683_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003475 245.0
CMS3_k127_63384_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1031.0
CMS3_k127_63384_1 C-terminal region of aryl-sulfatase - - - 0.0 1021.0
CMS3_k127_63384_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 490.0
CMS3_k127_63384_11 pdz dhr glgf - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 472.0
CMS3_k127_63384_12 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 452.0
CMS3_k127_63384_13 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 372.0
CMS3_k127_63384_14 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001504 261.0
CMS3_k127_63384_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000139 258.0
CMS3_k127_63384_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008594 250.0
CMS3_k127_63384_17 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000001388 218.0
CMS3_k127_63384_18 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000000000000000000000000009547 198.0
CMS3_k127_63384_19 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000006064 184.0
CMS3_k127_63384_2 Peptidase family M1 domain - - - 7.346e-262 822.0
CMS3_k127_63384_20 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000007136 174.0
CMS3_k127_63384_21 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000005088 156.0
CMS3_k127_63384_22 Response regulator receiver - - - 0.00008576 51.0
CMS3_k127_63384_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 3.23e-242 775.0
CMS3_k127_63384_4 DALR_2 K01883 - 6.1.1.16 2.994e-221 696.0
CMS3_k127_63384_5 May be involved in recombinational repair of damaged DNA K03631 - - 2.474e-203 653.0
CMS3_k127_63384_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 598.0
CMS3_k127_63384_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 547.0
CMS3_k127_63384_8 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 503.0
CMS3_k127_63384_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 496.0
CMS3_k127_636953_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.068e-227 719.0
CMS3_k127_636953_1 PFAM ATPase associated with various cellular activities, AAA_3 - - - 0.000000000000000000000000000000000000000000000000000000000001083 211.0
CMS3_k127_636953_2 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000008333 139.0
CMS3_k127_6372214_0 SMART alpha amylase, catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1355.0
CMS3_k127_6372214_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1046.0
CMS3_k127_6372214_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.093e-297 932.0
CMS3_k127_6372214_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 376.0
CMS3_k127_6372214_4 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000104 107.0
CMS3_k127_6372214_5 DNA-binding transcription factor activity - - - 0.00000000000001043 84.0
CMS3_k127_6372214_6 PFAM sodium hydrogen exchanger - - - 0.00000000000002644 76.0
CMS3_k127_6373556_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.12e-297 915.0
CMS3_k127_6373556_1 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 487.0
CMS3_k127_6373556_2 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 480.0
CMS3_k127_6373556_3 ribulose bisphosphate carboxylase small K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000001181 223.0
CMS3_k127_6409409_0 RNA polymerase sigma factor K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 406.0
CMS3_k127_6409409_1 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 370.0
CMS3_k127_6409409_2 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 363.0
CMS3_k127_6409409_3 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004137 257.0
CMS3_k127_6409409_4 - - - - 0.000000000000000000001133 101.0
CMS3_k127_6436967_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 590.0
CMS3_k127_6436967_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 336.0
CMS3_k127_6436967_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000005565 203.0
CMS3_k127_6436967_3 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000001513 189.0
CMS3_k127_6472925_0 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 1.014e-225 704.0
CMS3_k127_6472925_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 2.622e-217 676.0
CMS3_k127_6472925_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 359.0
CMS3_k127_6472925_3 sulfur relay protein TusD DsrE K07235 - - 0.00000000000000000000000000000000000000000000000000000000000008257 214.0
CMS3_k127_6472925_4 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000000000000000000000000003795 212.0
CMS3_k127_6472925_5 - - - - 0.00000000000000000000000000000000000000000000000000000002524 211.0
CMS3_k127_6472925_6 Cas6 Crispr - - - 0.000000000000000000000000000000000000000000000001332 183.0
CMS3_k127_6472925_7 DsrC like protein - - - 0.00000000000000000000000000000000000000000000009698 171.0
CMS3_k127_6472925_8 - - - - 0.00000000000000000000004912 100.0
CMS3_k127_6472925_9 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000001869 69.0
CMS3_k127_6487661_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 454.0
CMS3_k127_6487661_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 427.0
CMS3_k127_6487661_10 Transglutaminase/protease-like homologues - - - 0.000000000000000001213 100.0
CMS3_k127_6487661_2 Diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 349.0
CMS3_k127_6487661_3 phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 334.0
CMS3_k127_6487661_4 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 336.0
CMS3_k127_6487661_5 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
CMS3_k127_6487661_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000004348 211.0
CMS3_k127_6487661_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000009097 159.0
CMS3_k127_6487661_8 amine dehydrogenase activity - - - 0.00000000000000000000000000000000001114 142.0
CMS3_k127_6487661_9 - - - - 0.00000000000000000000000000003938 124.0
CMS3_k127_6510225_0 PFAM isocitrate lyase and phosphorylmutase K01637 - 4.1.3.1 1.163e-230 719.0
CMS3_k127_6510225_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001189 280.0
CMS3_k127_6510225_2 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.00000000000000000000000000000000000000000000000000000000000000005815 226.0
CMS3_k127_6510225_3 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000001548 97.0
CMS3_k127_6518872_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.0 1133.0
CMS3_k127_6518872_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 455.0
CMS3_k127_6518872_10 TIR domain - - - 0.0000000000000000000000000000000000000000000000000000007689 203.0
CMS3_k127_6518872_11 LigT like Phosphoesterase - - - 0.000000000000000000000000000000000000003105 154.0
CMS3_k127_6518872_12 nucleotide-binding protein - - - 0.000000000000000008314 94.0
CMS3_k127_6518872_13 Anaphase-promoting complex subunit 4 WD40 domain - - - 0.0000000001328 72.0
CMS3_k127_6518872_14 Protein of unknown function (DUF3106) - - - 0.0000009586 58.0
CMS3_k127_6518872_2 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 392.0
CMS3_k127_6518872_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 332.0
CMS3_k127_6518872_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 326.0
CMS3_k127_6518872_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 291.0
CMS3_k127_6518872_6 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002512 273.0
CMS3_k127_6518872_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000006369 228.0
CMS3_k127_6518872_8 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000000000000000000000000001586 201.0
CMS3_k127_6518872_9 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000005802 195.0
CMS3_k127_6550562_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 5.635e-259 805.0
CMS3_k127_6550562_1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00246 - - 0.000000000000000764 81.0
CMS3_k127_6550562_2 PFAM cytochrome c, class I K08738 - - 0.0000000000364 67.0
CMS3_k127_6565625_0 reductase, alpha subunit K00394 - 1.8.99.2 3.852e-313 964.0
CMS3_k127_6565625_1 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 409.0
CMS3_k127_6565625_2 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 363.0
CMS3_k127_6565625_3 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 330.0
CMS3_k127_6579574_0 ABC-type multidrug transport system, ATPase and permease K06147 - - 3.202e-214 682.0
CMS3_k127_6579574_1 Uncharacterised protein family (UPF0149) K07039 - - 0.0000000000000000000000000000000000000000005969 166.0
CMS3_k127_6579574_2 acyl-coa-binding protein K07516 - 1.1.1.35 0.000000000000000000000002702 106.0
CMS3_k127_6579574_3 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000003096 76.0
CMS3_k127_6579574_4 PFAM sodium calcium exchanger K07301 - - 0.00002419 46.0
CMS3_k127_66088_0 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 4e-307 949.0
CMS3_k127_66088_1 4Fe-4S single cluster domain - - - 2.501e-216 676.0
CMS3_k127_66088_2 cytochrome d1 heme K19345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 571.0
CMS3_k127_66088_3 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 364.0
CMS3_k127_66088_4 transcriptional regulator AsnC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002018 239.0
CMS3_k127_66088_5 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000001981 217.0
CMS3_k127_66088_6 heme biosynthesis protein - - - 0.00000000000000000000000000000000000000000000001361 177.0
CMS3_k127_66088_7 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.000000000000000000000000000000008341 130.0
CMS3_k127_66088_8 blue (type 1) copper - - - 0.0000000000000005045 78.0
CMS3_k127_6631217_0 - - - - 6.033e-253 809.0
CMS3_k127_6631217_1 TIGRFAM coenzyme PQQ biosynthesis protein E K06139 - - 1.036e-203 639.0
CMS3_k127_6631217_10 Coenzyme PQQ synthesis protein D (PqqD) K06138 - - 0.00000000000000000000001392 102.0
CMS3_k127_6631217_2 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 463.0
CMS3_k127_6631217_3 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 420.0
CMS3_k127_6631217_4 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 331.0
CMS3_k127_6631217_5 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 319.0
CMS3_k127_6631217_6 TOBE domain K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 316.0
CMS3_k127_6631217_7 PFAM response regulator receiver K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 288.0
CMS3_k127_6631217_8 Transport Permease Protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001596 277.0
CMS3_k127_6631217_9 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008013 256.0
CMS3_k127_6657243_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 2.07e-314 972.0
CMS3_k127_6657243_1 carboxylase K01965 - 6.4.1.3 4.268e-308 957.0
CMS3_k127_6657243_10 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 280.0
CMS3_k127_6657243_11 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001371 283.0
CMS3_k127_6657243_12 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000003299 237.0
CMS3_k127_6657243_13 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000006758 220.0
CMS3_k127_6657243_14 PFAM Di-haem cytochrome c - - - 0.000000000000000000000000000000000000000001627 168.0
CMS3_k127_6657243_15 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000000002264 159.0
CMS3_k127_6657243_16 - - - - 0.00000000000000000000000000002515 131.0
CMS3_k127_6657243_17 Dienelactone hydrolase - - - 0.0000000000000000000009654 108.0
CMS3_k127_6657243_18 Response regulator receiver - - - 0.00000000000000005882 89.0
CMS3_k127_6657243_2 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.44e-205 650.0
CMS3_k127_6657243_3 dehydrogenase, E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 578.0
CMS3_k127_6657243_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 557.0
CMS3_k127_6657243_5 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 428.0
CMS3_k127_6657243_6 cation diffusion facilitator family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 420.0
CMS3_k127_6657243_7 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 427.0
CMS3_k127_6657243_8 PFAM AFG1-family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 408.0
CMS3_k127_6657243_9 histidine kinase HAMP region domain protein K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 400.0
CMS3_k127_6691403_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1036.0
CMS3_k127_6691403_1 Multicopper oxidase K22348 - 1.16.3.3 2.067e-232 728.0
CMS3_k127_6691403_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 495.0
CMS3_k127_6691403_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 305.0
CMS3_k127_6691403_4 - - - - 0.0000000000000000000000000000000000000000000003501 171.0
CMS3_k127_6691403_5 PFAM Blue (type 1) copper domain - - - 0.0000000000000000000000000000000000000000003651 166.0
CMS3_k127_6691403_6 - - - - 0.0000000000000000000000000001046 120.0
CMS3_k127_6691403_7 Copper binding periplasmic protein CusF - - - 0.000000000000000000006437 97.0
CMS3_k127_6691403_9 - - - - 0.0001335 49.0
CMS3_k127_6704524_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1156.0
CMS3_k127_6704524_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.782e-197 617.0
CMS3_k127_6704524_2 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 552.0
CMS3_k127_6704524_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000004098 147.0
CMS3_k127_6704524_4 Signal transduction histidine kinase - - - 0.0000000000000000000000001746 107.0
CMS3_k127_6708433_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 9.051e-296 917.0
CMS3_k127_6708433_1 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218,K17229 - 1.8.2.3,1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 601.0
CMS3_k127_6708433_10 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001549 256.0
CMS3_k127_6708433_11 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
CMS3_k127_6708433_12 Aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000000000000001048 198.0
CMS3_k127_6708433_13 Pfam cytochrome c K17230 - - 0.00000000000000000000000000000000000000000000000001508 186.0
CMS3_k127_6708433_14 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000000000335 180.0
CMS3_k127_6708433_15 SpoIIAA-like - - - 0.000000000000000000000000000000000000011 147.0
CMS3_k127_6708433_16 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000001684 151.0
CMS3_k127_6708433_17 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000003466 95.0
CMS3_k127_6708433_18 Ethylbenzene dehydrogenase K02569 - - 0.000000000000001242 76.0
CMS3_k127_6708433_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 468.0
CMS3_k127_6708433_3 Histidine kinase K20975 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 456.0
CMS3_k127_6708433_4 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 421.0
CMS3_k127_6708433_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 374.0
CMS3_k127_6708433_6 Polycystin cation channel K08714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 340.0
CMS3_k127_6708433_7 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 325.0
CMS3_k127_6708433_8 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 320.0
CMS3_k127_6708433_9 of the drug metabolite transporter (DMT) superfamily K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 321.0
CMS3_k127_6711330_0 Tail sheath protein K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 618.0
CMS3_k127_6711330_1 Phage late control gene D protein (GPD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 325.0
CMS3_k127_6711330_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 331.0
CMS3_k127_6711330_3 tail sheath protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 280.0
CMS3_k127_6711330_4 Baseplate J-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004308 258.0
CMS3_k127_6711330_5 Protein conserved in bacteria K11904 - - 0.0000000000000000000000000000000000000000000000000000000000001953 221.0
CMS3_k127_6711330_6 TIGRFAM conserved - - - 0.000000000000000000000000000000000000000000000000000005075 193.0
CMS3_k127_6711330_7 TIGRFAM conserved - - - 0.00000000000000000000000000000000000000000000004227 175.0
CMS3_k127_6711330_8 Gene 25-like lysozyme K06903 - - 0.0000000000000000000000000000000000000007293 152.0
CMS3_k127_6711330_9 LysM domain - - - 0.00000000000000000000000000000000009478 153.0
CMS3_k127_6716159_0 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 473.0
CMS3_k127_6716159_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 399.0
CMS3_k127_6716159_2 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 371.0
CMS3_k127_6716159_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006419 263.0
CMS3_k127_6716159_4 Tetratricopeptide repeat - - - 0.00000001273 64.0
CMS3_k127_6719961_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 5.904e-307 951.0
CMS3_k127_6719961_1 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846 - 4.4.1.24 4.971e-209 658.0
CMS3_k127_6719961_10 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000129 190.0
CMS3_k127_6719961_11 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000001027 190.0
CMS3_k127_6719961_12 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000001641 188.0
CMS3_k127_6719961_13 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000001488 134.0
CMS3_k127_6719961_14 SAF K16845 - 4.4.1.24 0.0000000000000000000000000000000009572 133.0
CMS3_k127_6719961_15 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000002301 126.0
CMS3_k127_6719961_17 - - - - 0.00000000006405 64.0
CMS3_k127_6719961_18 - - - - 0.0001056 46.0
CMS3_k127_6719961_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 8.024e-203 647.0
CMS3_k127_6719961_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 460.0
CMS3_k127_6719961_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 455.0
CMS3_k127_6719961_5 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 424.0
CMS3_k127_6719961_6 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 394.0
CMS3_k127_6719961_7 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 361.0
CMS3_k127_6719961_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000002371 234.0
CMS3_k127_6719961_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000003767 198.0
CMS3_k127_672349_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1438.0
CMS3_k127_672349_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 548.0
CMS3_k127_672349_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 370.0
CMS3_k127_672349_3 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000000116 179.0
CMS3_k127_672349_4 ATP-independent chaperone mediated protein folding - - - 0.00000002369 57.0
CMS3_k127_6729039_0 Putative peptidoglycan binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004263 233.0
CMS3_k127_6729039_1 - - - - 0.00000000000000000000000000000000000000000005461 162.0
CMS3_k127_6729039_2 amine dehydrogenase activity - - - 0.00000000000000000000005748 115.0
CMS3_k127_6729039_3 - - - - 0.000224 48.0
CMS3_k127_6737240_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1114.0
CMS3_k127_6737240_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 389.0
CMS3_k127_6737240_2 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 341.0
CMS3_k127_6737240_3 - - - - 0.0000000000000002121 80.0
CMS3_k127_6739168_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.32e-225 703.0
CMS3_k127_6739168_1 Glutathione S-transferase, N-terminal domain K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 346.0
CMS3_k127_6739168_2 Cytochrome C1 family K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 302.0
CMS3_k127_6739168_3 Rieske [2Fe-2S] domain K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 285.0
CMS3_k127_6739168_4 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000001009 160.0
CMS3_k127_6739168_5 dinuclear metal center protein, YbgI - - - 0.0000000000000000000000000000000000001128 142.0
CMS3_k127_6744026_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 507.0
CMS3_k127_6744026_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 472.0
CMS3_k127_6744026_10 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000001467 142.0
CMS3_k127_6744026_11 FabA-like domain - - - 0.0000000000000000000000000256 122.0
CMS3_k127_6744026_12 Protein of unknown function (DUF2788) - - - 0.0000000000000000000003684 109.0
CMS3_k127_6744026_13 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000007367 59.0
CMS3_k127_6744026_14 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00003454 56.0
CMS3_k127_6744026_2 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 352.0
CMS3_k127_6744026_3 KR domain K10780 - 1.3.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 301.0
CMS3_k127_6744026_4 lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000009537 243.0
CMS3_k127_6744026_5 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000006044 235.0
CMS3_k127_6744026_6 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000006121 229.0
CMS3_k127_6744026_7 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000007076 230.0
CMS3_k127_6744026_8 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000003317 222.0
CMS3_k127_6744026_9 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000001144 211.0
CMS3_k127_6756814_0 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 426.0
CMS3_k127_6756814_1 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000001739 226.0
CMS3_k127_6756814_2 PFAM chemotaxis K03406,K07216 - - 0.0000000000000000000378 94.0
CMS3_k127_6764203_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 6.439e-195 619.0
CMS3_k127_6764203_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000006618 239.0
CMS3_k127_6764203_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000001268 180.0
CMS3_k127_6764203_3 PFAM Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000001244 175.0
CMS3_k127_6772651_0 glycyl-tRNA synthetase beta K01879 - 6.1.1.14 3.927e-218 698.0
CMS3_k127_6772651_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 586.0
CMS3_k127_6772651_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 566.0
CMS3_k127_6772651_3 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009679 515.0
CMS3_k127_6772651_4 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 417.0
CMS3_k127_6772651_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 335.0
CMS3_k127_6772651_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 263.0
CMS3_k127_6772651_7 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000002582 224.0
CMS3_k127_6775779_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 6.923e-204 640.0
CMS3_k127_6775779_1 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 514.0
CMS3_k127_6775779_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 441.0
CMS3_k127_6775779_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000003337 274.0
CMS3_k127_6775779_4 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000003687 200.0
CMS3_k127_6776767_0 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000001138 232.0
CMS3_k127_6776767_1 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.00000000000000000000000000000000000000000000000000000003233 203.0
CMS3_k127_6776767_2 Belongs to the globin family - - - 0.0000000000000000000000000884 113.0
CMS3_k127_6776767_3 Cytochrome c - - - 0.0000000211 61.0
CMS3_k127_6779759_0 Cysteine-rich domain - - - 2.978e-239 745.0
CMS3_k127_6779759_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 545.0
CMS3_k127_6779759_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 387.0
CMS3_k127_6779759_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 292.0
CMS3_k127_6779759_4 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003095 274.0
CMS3_k127_6779759_5 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003277 261.0
CMS3_k127_6779759_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000005363 204.0
CMS3_k127_6779759_7 CNP1-like family - - - 0.00000000000000000000000000000000000000000000000002105 186.0
CMS3_k127_6779759_8 WD domain, G-beta repeat - - - 0.0000000000000000000000000000755 124.0
CMS3_k127_6779759_9 Protein of unknown function (DUF3617) - - - 0.000000000000000264 85.0
CMS3_k127_67980_0 Outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 511.0
CMS3_k127_67980_1 Lipocalin-like domain K03098 - - 0.000000000000000000000000000000000000000000000000000009656 199.0
CMS3_k127_67980_2 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000009819 195.0
CMS3_k127_67980_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000001114 183.0
CMS3_k127_6830444_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 577.0
CMS3_k127_6830444_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 289.0
CMS3_k127_6830444_2 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000001659 194.0
CMS3_k127_6848746_0 Large family of predicted nucleotide-binding domains K07175 - - 2.29e-254 791.0
CMS3_k127_6848746_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 496.0
CMS3_k127_6848746_2 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 436.0
CMS3_k127_6848746_3 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 427.0
CMS3_k127_6848746_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 314.0
CMS3_k127_6848746_5 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000004003 250.0
CMS3_k127_6848746_6 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000004084 232.0
CMS3_k127_6848746_7 - - - - 0.00000000000000000000000000000000001506 145.0
CMS3_k127_6848746_8 - - - - 0.0000000000000147 80.0
CMS3_k127_6855702_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1570.0
CMS3_k127_6855702_1 Circularly permuted ATP-grasp type 2 - - - 6.663e-234 730.0
CMS3_k127_6855702_2 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 456.0
CMS3_k127_6855702_3 Histone deacetylase domain K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 410.0
CMS3_k127_6855702_4 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 399.0
CMS3_k127_6855702_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 341.0
CMS3_k127_6855702_6 PFAM 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 311.0
CMS3_k127_6855702_7 glycosyl transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 304.0
CMS3_k127_6855702_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000286 141.0
CMS3_k127_6882632_0 PQQ-like domain - - - 0.0 1101.0
CMS3_k127_6882632_1 Formylmethanofuran-tetrahydromethanopterin formyltransferase K00672 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0071704 2.3.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 454.0
CMS3_k127_6882632_2 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 383.0
CMS3_k127_6882632_3 GXGXG motif K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000671 265.0
CMS3_k127_6882632_4 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004422 254.0
CMS3_k127_6882632_5 - - - - 0.00000000000000000000000000000000000000000000000000000000001474 213.0
CMS3_k127_6882632_6 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000004888 200.0
CMS3_k127_6882632_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000003791 148.0
CMS3_k127_6882632_8 Pterin 4 alpha carbinolamine dehydratase - - - 0.00000000000000000000002994 103.0
CMS3_k127_6882632_9 Cytochrome c - - - 0.000000000000000000001307 109.0
CMS3_k127_6883043_0 Domain of unknown function (DUF3400) - - - 0.0 1966.0
CMS3_k127_6883043_1 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 413.0
CMS3_k127_6883043_2 HIT domain - - - 0.0000000000000000000000000000000000000000000054 166.0
CMS3_k127_6910165_0 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.789e-228 713.0
CMS3_k127_6910165_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 361.0
CMS3_k127_6910165_2 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 339.0
CMS3_k127_6910165_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 320.0
CMS3_k127_6910165_4 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000000000001718 238.0
CMS3_k127_6910165_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
CMS3_k127_6910165_6 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.000000000000000000000000000000001043 131.0
CMS3_k127_6910165_7 - - - - 0.00000000000000000000000004471 110.0
CMS3_k127_6910165_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000002602 65.0
CMS3_k127_6936702_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 4.8e-322 998.0
CMS3_k127_6936702_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 5.497e-210 665.0
CMS3_k127_6936702_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.561e-202 639.0
CMS3_k127_6936702_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 2.301e-200 638.0
CMS3_k127_6936702_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 543.0
CMS3_k127_6936702_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 496.0
CMS3_k127_6936702_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000001044 113.0
CMS3_k127_6936702_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000002727 76.0
CMS3_k127_6936702_8 membrane transporter protein K07090 - - 0.000000000000006193 77.0
CMS3_k127_6936702_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000002355 63.0
CMS3_k127_6944365_0 Sulfate transporter antisigma-factor antagonist STAS - - - 1.326e-289 904.0
CMS3_k127_6944365_1 NADH ubiquinone plastoquinone (Complex I) - - - 4.292e-282 881.0
CMS3_k127_6944365_10 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 464.0
CMS3_k127_6944365_11 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 435.0
CMS3_k127_6944365_12 Pfam Periplasmic binding protein K02016,K06858 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 298.0
CMS3_k127_6944365_13 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 307.0
CMS3_k127_6944365_14 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003081 280.0
CMS3_k127_6944365_15 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001143 273.0
CMS3_k127_6944365_16 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000004337 248.0
CMS3_k127_6944365_17 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005206 240.0
CMS3_k127_6944365_18 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000000000000001932 212.0
CMS3_k127_6944365_19 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000001001 136.0
CMS3_k127_6944365_2 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 1.195e-251 786.0
CMS3_k127_6944365_20 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000000000002692 143.0
CMS3_k127_6944365_21 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000006267 137.0
CMS3_k127_6944365_22 Cytochrome c, class I - - - 0.0000000000000000000000000006304 121.0
CMS3_k127_6944365_23 Dodecin K09165 - - 0.00000000000000000000003736 102.0
CMS3_k127_6944365_24 - - - - 0.0000000000000004784 82.0
CMS3_k127_6944365_3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 2.148e-233 728.0
CMS3_k127_6944365_4 STAS domain K03321 - - 2.272e-227 719.0
CMS3_k127_6944365_5 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 2.361e-209 662.0
CMS3_k127_6944365_6 Universal stress protein family K07090 - - 1.761e-202 649.0
CMS3_k127_6944365_7 Chromate transporter - - - 1.133e-201 636.0
CMS3_k127_6944365_8 DAHP synthetase I family K03856 - 2.5.1.54 3.234e-200 628.0
CMS3_k127_6944365_9 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 486.0
CMS3_k127_6951269_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 7.006e-236 738.0
CMS3_k127_6951269_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 553.0
CMS3_k127_6951269_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 376.0
CMS3_k127_6951269_3 Pfam Binding-protein-dependent transport systems inner membrane component K02054,K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 363.0
CMS3_k127_6951269_4 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000006624 234.0
CMS3_k127_6951269_5 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000001143 203.0
CMS3_k127_6951269_6 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000001511 161.0
CMS3_k127_6951269_7 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000005991 143.0
CMS3_k127_6951269_8 - - - - 0.00000004834 65.0
CMS3_k127_6951269_9 - - - - 0.0000000646 63.0
CMS3_k127_6972539_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 507.0
CMS3_k127_6972539_1 Converts GTP to 7,8-dihydroneopterin triphosphate K01495,K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 305.0
CMS3_k127_6972539_2 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008288 299.0
CMS3_k127_6972539_3 B12 binding domain K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 289.0
CMS3_k127_6972539_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000001552 247.0
CMS3_k127_6972539_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000004085 248.0
CMS3_k127_6972539_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000139 226.0
CMS3_k127_6972539_7 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000002837 154.0
CMS3_k127_6972539_8 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000004177 147.0
CMS3_k127_7010575_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 2.88e-212 666.0
CMS3_k127_7010575_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 445.0
CMS3_k127_7010575_2 DnaJ C terminal domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 357.0
CMS3_k127_7010575_3 DNA topoisomerase III K03169 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 340.0
CMS3_k127_7010575_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 287.0
CMS3_k127_7010575_5 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000009207 179.0
CMS3_k127_7010575_6 Domain of unknown function DUF123 - - - 0.00000000000000000000000000000000002892 139.0
CMS3_k127_7010575_7 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K18997 GO:0003674,GO:0004857,GO:0008150,GO:0030234,GO:0043086,GO:0044092,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.00000000003904 68.0
CMS3_k127_7045636_0 ABC transporter K01999 - - 2.27e-205 644.0
CMS3_k127_7045636_1 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 371.0
CMS3_k127_7045636_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 321.0
CMS3_k127_7069666_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 503.0
CMS3_k127_7069666_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 482.0
CMS3_k127_7069666_2 Belongs to the anti-sigma-factor antagonist family - - - 0.00000000000000000000000000000000000000007696 159.0
CMS3_k127_7069666_3 Belongs to the anti-sigma-factor antagonist family - - - 0.00000000000000000000000000000002448 134.0
CMS3_k127_7069666_4 protein conserved in bacteria K09790 - - 0.000000000000000000000000008232 111.0
CMS3_k127_7074030_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 451.0
CMS3_k127_7074030_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 414.0
CMS3_k127_7074030_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000008655 197.0
CMS3_k127_7074030_3 - - - - 0.00000000000000000000000000002995 122.0
CMS3_k127_7074030_4 - - - - 0.000000000000000000000001217 109.0
CMS3_k127_7117417_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.536e-256 798.0
CMS3_k127_7117417_1 AMP-binding enzyme C-terminal domain - - - 1.138e-236 741.0
CMS3_k127_7117417_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 518.0
CMS3_k127_7117417_3 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 470.0
CMS3_k127_7117417_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 337.0
CMS3_k127_7117417_5 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001283 240.0
CMS3_k127_7117417_6 Fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000007605 217.0
CMS3_k127_7117417_7 Domain of unknown function (DUF4410) - - - 0.0000000000000000000000000000000000000000000000000004506 189.0
CMS3_k127_7117417_8 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000000008723 159.0
CMS3_k127_7117417_9 - - - - 0.0000000000000000000000000000000000000001126 157.0
CMS3_k127_712856_0 Threonine synthase K01733 - 4.2.3.1 2.384e-222 698.0
CMS3_k127_712856_1 homoserine dehydrogenase K00003 - 1.1.1.3 1.117e-216 679.0
CMS3_k127_712856_2 Domain of unknown function (DUF3482) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 460.0
CMS3_k127_712856_3 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 422.0
CMS3_k127_712856_4 Protein of unknown function (DUF2868) - - - 0.000000000000000000000000000000000000000000000000000004428 203.0
CMS3_k127_7161217_0 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1287.0
CMS3_k127_7161217_1 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18661 - - 5.154e-202 640.0
CMS3_k127_7161217_10 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 328.0
CMS3_k127_7161217_11 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
CMS3_k127_7161217_12 Protein of unknown function (DUF3530) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002824 254.0
CMS3_k127_7161217_13 response to copper ion - - - 0.00000000000000000000000000000000000000000000000000003692 191.0
CMS3_k127_7161217_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000004099 179.0
CMS3_k127_7161217_15 AzlC protein - - - 0.000000000000000000000000000000000000000000000005079 191.0
CMS3_k127_7161217_16 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000001861 132.0
CMS3_k127_7161217_17 Cytochrome c K08738 - - 0.0000000000000000000000000004325 115.0
CMS3_k127_7161217_18 Branched-chain amino acid transport protein (AzlD) - - - 0.0000000000000000001099 94.0
CMS3_k127_7161217_2 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 2.871e-198 639.0
CMS3_k127_7161217_3 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 587.0
CMS3_k127_7161217_4 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 576.0
CMS3_k127_7161217_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 547.0
CMS3_k127_7161217_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 524.0
CMS3_k127_7161217_7 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 471.0
CMS3_k127_7161217_8 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 361.0
CMS3_k127_7161217_9 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 342.0
CMS3_k127_726690_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.137e-297 924.0
CMS3_k127_726690_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 319.0
CMS3_k127_726690_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000006893 246.0
CMS3_k127_726690_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000006704 158.0
CMS3_k127_726690_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000002411 145.0
CMS3_k127_731125_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.457e-280 869.0
CMS3_k127_731125_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 508.0
CMS3_k127_731125_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 425.0
CMS3_k127_731125_3 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 376.0
CMS3_k127_7313675_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 7e-323 1000.0
CMS3_k127_7313675_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.482e-270 842.0
CMS3_k127_7313675_2 dihydroorotase K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 459.0
CMS3_k127_7313675_3 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 394.0
CMS3_k127_7313675_4 response regulator K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
CMS3_k127_7313675_5 Pfam Glutaredoxin - - - 0.000000000000000000000000000000000000000007821 161.0
CMS3_k127_731791_0 Carbamoyltransferase C-terminus K00612 - - 4.956e-306 946.0
CMS3_k127_731791_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 491.0
CMS3_k127_731791_2 - - - - 0.00000000000000000000000000000001576 145.0
CMS3_k127_731791_3 PFAM Transketolase central region K00162 - 1.2.4.1 0.00000000000000000000000008007 108.0
CMS3_k127_731791_4 - - - - 0.00000000000004046 80.0
CMS3_k127_731791_5 lipolytic protein G-D-S-L family - - - 0.0004452 52.0
CMS3_k127_731874_0 Cytochrome b(N-terminal)/b6/petB - - - 3.035e-231 730.0
CMS3_k127_731874_1 Response regulator receiver K07714,K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 608.0
CMS3_k127_731874_2 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 556.0
CMS3_k127_731874_3 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 556.0
CMS3_k127_731874_4 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 530.0
CMS3_k127_731874_5 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 483.0
CMS3_k127_731874_6 - - - - 0.00000000000000000000000000000000000001094 157.0
CMS3_k127_731874_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000002487 111.0
CMS3_k127_731874_8 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000003417 98.0
CMS3_k127_731874_9 Two component regulator propeller - - - 0.0000168 47.0
CMS3_k127_7326709_0 Malic enzyme K00029 - 1.1.1.40 0.0 1074.0
CMS3_k127_7326709_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1021.0
CMS3_k127_7326709_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 336.0
CMS3_k127_7326709_11 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 313.0
CMS3_k127_7326709_12 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 302.0
CMS3_k127_7326709_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 289.0
CMS3_k127_7326709_14 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001185 254.0
CMS3_k127_7326709_15 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000000000000000000000000000000000000000000000000000000537 234.0
CMS3_k127_7326709_16 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
CMS3_k127_7326709_17 Protein of unknown function, DUF599 - - - 0.0000000000000000000000000000000000000000000000000000000000000001648 228.0
CMS3_k127_7326709_18 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000001199 215.0
CMS3_k127_7326709_19 PFAM Bacterial protein of - - - 0.000000000000000000000000000000000000000000000000000000001243 211.0
CMS3_k127_7326709_2 elongation factor G K02355 - - 1e-323 1004.0
CMS3_k127_7326709_20 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000000000000001472 190.0
CMS3_k127_7326709_21 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000005414 192.0
CMS3_k127_7326709_22 diol metabolic process K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000006165 183.0
CMS3_k127_7326709_23 MobA-Related Protein K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000002705 179.0
CMS3_k127_7326709_24 PFAM transcription elongation factor GreA GreB - - - 0.00000000000000000000000000000000000000000000003062 182.0
CMS3_k127_7326709_25 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000001204 146.0
CMS3_k127_7326709_26 - - - - 0.000000000000000000000000000000000009825 138.0
CMS3_k127_7326709_27 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000001286 144.0
CMS3_k127_7326709_28 Cytochrome c - - - 0.0000000000000000000000000001425 117.0
CMS3_k127_7326709_29 - - - - 0.00000000000000001977 87.0
CMS3_k127_7326709_3 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 498.0
CMS3_k127_7326709_30 - - - - 0.0000000000002007 80.0
CMS3_k127_7326709_4 Lipase maturation factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 460.0
CMS3_k127_7326709_5 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 409.0
CMS3_k127_7326709_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 399.0
CMS3_k127_7326709_7 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 391.0
CMS3_k127_7326709_8 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 368.0
CMS3_k127_7326709_9 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 346.0
CMS3_k127_7327623_0 SMART Tetratricopeptide domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 581.0
CMS3_k127_7327623_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 528.0
CMS3_k127_7327623_10 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000000000000000000008712 188.0
CMS3_k127_7327623_11 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000000000000000493 177.0
CMS3_k127_7327623_12 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000002217 150.0
CMS3_k127_7327623_13 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000001983 143.0
CMS3_k127_7327623_2 transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 505.0
CMS3_k127_7327623_3 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 379.0
CMS3_k127_7327623_4 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 368.0
CMS3_k127_7327623_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 361.0
CMS3_k127_7327623_6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 349.0
CMS3_k127_7327623_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002657 261.0
CMS3_k127_7327623_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004192 251.0
CMS3_k127_7327623_9 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000001277 241.0
CMS3_k127_7373059_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1135.0
CMS3_k127_7373059_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 587.0
CMS3_k127_7373059_2 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 561.0
CMS3_k127_7373059_3 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 553.0
CMS3_k127_7373059_4 Long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 379.0
CMS3_k127_7373059_5 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004311 249.0
CMS3_k127_7444795_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.9e-252 787.0
CMS3_k127_7444795_1 Belongs to the GARS family K01945 - 6.3.4.13 7.077e-202 635.0
CMS3_k127_7444795_10 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 355.0
CMS3_k127_7444795_11 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 320.0
CMS3_k127_7444795_12 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 330.0
CMS3_k127_7444795_13 Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003304 281.0
CMS3_k127_7444795_14 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000001312 205.0
CMS3_k127_7444795_15 transcriptional regulator - - - 0.00000000000000000000000000000001133 136.0
CMS3_k127_7444795_16 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000002659 126.0
CMS3_k127_7444795_17 - - - - 0.00008771 51.0
CMS3_k127_7444795_2 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 5.422e-198 624.0
CMS3_k127_7444795_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 569.0
CMS3_k127_7444795_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 541.0
CMS3_k127_7444795_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 535.0
CMS3_k127_7444795_6 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 532.0
CMS3_k127_7444795_7 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 484.0
CMS3_k127_7444795_8 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 480.0
CMS3_k127_7444795_9 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 396.0
CMS3_k127_7498650_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 514.0
CMS3_k127_7498650_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000007789 203.0
CMS3_k127_7498650_2 CHRD domain - - - 0.000000000000000000000000000000002378 136.0
CMS3_k127_7498650_3 Uncharacterized ArCR, COG1888 K09732 - - 0.0000000000000000003257 96.0
CMS3_k127_7498650_4 type II secretion system protein E K02454,K02652,K12276 - - 0.0000000000000006559 81.0
CMS3_k127_7579775_0 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 475.0
CMS3_k127_7579775_1 COG2010 Cytochrome c, mono- and diheme variants K15864 - 1.7.2.1,1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 416.0
CMS3_k127_7579775_10 - - - - 0.00000000001515 68.0
CMS3_k127_7579775_2 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 366.0
CMS3_k127_7579775_3 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 335.0
CMS3_k127_7579775_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 317.0
CMS3_k127_7579775_5 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 295.0
CMS3_k127_7579775_6 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 301.0
CMS3_k127_7579775_7 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000002475 160.0
CMS3_k127_7579775_8 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000003108 159.0
CMS3_k127_7579775_9 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000000000299 96.0
CMS3_k127_7586026_0 cytochrome - - - 1.915e-202 634.0
CMS3_k127_7586026_1 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 609.0
CMS3_k127_7586026_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.00000000000000000000000000000000000001757 145.0
CMS3_k127_761739_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 346.0
CMS3_k127_761739_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 355.0
CMS3_k127_761739_2 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000003682 210.0
CMS3_k127_7631744_0 AAA ATPase central domain protein K07478 - - 2.043e-218 683.0
CMS3_k127_7631744_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002039 255.0
CMS3_k127_7631744_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000181 201.0
CMS3_k127_7631744_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000001485 191.0
CMS3_k127_7631744_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000001123 61.0
CMS3_k127_774998_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 6.726e-203 640.0
CMS3_k127_774998_1 Beta-Casp domain K07576 - - 2.235e-196 625.0
CMS3_k127_774998_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 492.0
CMS3_k127_774998_3 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 502.0
CMS3_k127_774998_4 Putative molybdenum carrier - - - 0.00000000000000000000000000000000000000000000000003762 185.0
CMS3_k127_774998_5 - - - - 0.000000000000000000000000000000000000004679 153.0
CMS3_k127_774998_6 membrane - - - 0.000000000000000000000000000000000000006802 147.0
CMS3_k127_774998_7 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000004819 111.0
CMS3_k127_816504_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1197.0
CMS3_k127_816504_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.173e-207 655.0
CMS3_k127_816504_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 413.0
CMS3_k127_816504_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 381.0
CMS3_k127_816504_4 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 377.0
CMS3_k127_816504_5 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 375.0
CMS3_k127_816504_6 Esterase, phb depolymerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004708 278.0
CMS3_k127_816504_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000002464 175.0
CMS3_k127_82941_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 522.0
CMS3_k127_82941_1 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 322.0
CMS3_k127_82941_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000006087 260.0
CMS3_k127_82941_3 Protein of unknown function (DUF2892) - - - 0.000000000000000000000004433 103.0
CMS3_k127_82941_4 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000004486 91.0
CMS3_k127_82941_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00002911 49.0
CMS3_k127_837034_0 COG2010 Cytochrome c, mono- and diheme variants K15864 - 1.7.2.1,1.7.99.1 9.169e-241 745.0
CMS3_k127_837034_1 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 403.0
CMS3_k127_837034_2 cytochrome c-type protein K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004457 281.0
CMS3_k127_837034_3 blue (type 1) copper - - - 0.000000000000000000000000000002962 124.0
CMS3_k127_84420_0 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 537.0
CMS3_k127_84420_1 Zinc-binding dehydrogenase K12957 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 383.0
CMS3_k127_84420_2 PBP superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005703 270.0
CMS3_k127_84420_3 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.0000000000000000000000005575 112.0
CMS3_k127_84420_4 PFAM TOBE domain protein - - - 0.000000000000000003679 86.0
CMS3_k127_856215_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 6.355e-320 998.0
CMS3_k127_856215_1 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 613.0
CMS3_k127_856215_2 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 526.0
CMS3_k127_856215_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 434.0
CMS3_k127_856215_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 407.0
CMS3_k127_856215_5 (ABC) transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 394.0
CMS3_k127_856215_6 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002215 270.0
CMS3_k127_856215_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000004784 92.0
CMS3_k127_856215_9 Protein-disulfide isomerase K07396 - - 0.0000000002756 63.0
CMS3_k127_868778_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 4.567e-251 789.0
CMS3_k127_868778_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.058e-239 747.0
CMS3_k127_868778_10 Domain of unknown function (DUF4124) - - - 0.0000000000000000000000000000001011 133.0
CMS3_k127_868778_11 phosphocarrier, HPr family K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000006896 78.0
CMS3_k127_868778_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.867e-224 702.0
CMS3_k127_868778_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 7.765e-197 618.0
CMS3_k127_868778_4 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 540.0
CMS3_k127_868778_5 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 526.0
CMS3_k127_868778_6 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 419.0
CMS3_k127_868778_7 PFAM Methionine biosynthesis MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703 302.0
CMS3_k127_868778_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 297.0
CMS3_k127_868778_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000001082 148.0
CMS3_k127_87220_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1451.0
CMS3_k127_87220_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.783e-256 812.0
CMS3_k127_87220_10 - - - - 0.0000000000001259 77.0
CMS3_k127_87220_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 8.8e-252 792.0
CMS3_k127_87220_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 8.143e-194 608.0
CMS3_k127_87220_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 320.0
CMS3_k127_87220_5 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 310.0
CMS3_k127_87220_6 ATP adenylyltransferase K00988 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 314.0
CMS3_k127_87220_7 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000002919 239.0
CMS3_k127_87220_8 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000003816 170.0
CMS3_k127_87220_9 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000007003 168.0
CMS3_k127_872543_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1034.0
CMS3_k127_872543_1 Trypsin K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 543.0
CMS3_k127_872543_10 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000004466 218.0
CMS3_k127_872543_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000006395 183.0
CMS3_k127_872543_12 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000000000000000002208 136.0
CMS3_k127_872543_13 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000008188 130.0
CMS3_k127_872543_14 Heavy metal-associated domain protein K07213 - - 0.0000000000000000000004727 98.0
CMS3_k127_872543_15 Protein of unknown function (DUF3460) - - - 0.0000000000002416 74.0
CMS3_k127_872543_16 Protein of unknown function (DUF3567) - - - 0.000000000005434 70.0
CMS3_k127_872543_2 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 452.0
CMS3_k127_872543_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 403.0
CMS3_k127_872543_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 358.0
CMS3_k127_872543_5 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 323.0
CMS3_k127_872543_6 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 338.0
CMS3_k127_872543_7 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003597 269.0
CMS3_k127_872543_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003871 275.0
CMS3_k127_872543_9 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000896 224.0
CMS3_k127_87430_0 Signal transduction histidine kinase - - - 5.852e-233 741.0
CMS3_k127_87430_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000004404 177.0
CMS3_k127_87430_2 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000005074 148.0
CMS3_k127_96051_0 GMP synthase C terminal domain K01951 - 6.3.5.2 7.657e-306 941.0
CMS3_k127_96051_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.634e-246 768.0
CMS3_k127_96051_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000002383 198.0
CMS3_k127_96051_3 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000007932 188.0
CMS3_k127_96051_4 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000005596 131.0
CMS3_k127_96051_5 Domain of unknown function (DUF4124) - - - 0.00000000000000000001225 100.0
CMS3_k127_96051_6 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000002433 60.0
CMS3_k127_963379_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 8.541e-239 749.0
CMS3_k127_963379_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.155e-198 627.0
CMS3_k127_963379_10 Cadherin repeats. - - - 0.00000000000000000000000000000004934 145.0
CMS3_k127_963379_11 - - - - 0.0000000000000000000000000000004147 128.0
CMS3_k127_963379_12 response regulator, receiver - - - 0.000000000000000003776 89.0
CMS3_k127_963379_13 - - - - 0.0000000000000002775 91.0
CMS3_k127_963379_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 555.0
CMS3_k127_963379_3 Secretin and TonB N terminus short domain K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 554.0
CMS3_k127_963379_4 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 471.0
CMS3_k127_963379_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 365.0
CMS3_k127_963379_6 PFAM Fibronectin type III domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 324.0
CMS3_k127_963379_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 302.0
CMS3_k127_963379_8 - - - - 0.0000000000000000000000000000000000000002101 163.0
CMS3_k127_963379_9 carbon utilization K02664,K02665 - - 0.0000000000000000000000000000000001098 141.0
CMS3_k127_98922_0 O-acetylhomoserine K01740 - 2.5.1.49 4.826e-233 727.0
CMS3_k127_98922_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 9.206e-209 658.0
CMS3_k127_98922_10 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000001513 153.0
CMS3_k127_98922_2 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 647.0
CMS3_k127_98922_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 509.0
CMS3_k127_98922_4 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 502.0
CMS3_k127_98922_5 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 497.0
CMS3_k127_98922_6 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 457.0
CMS3_k127_98922_7 surface antigen K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 444.0
CMS3_k127_98922_8 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000000000000000003902 208.0
CMS3_k127_98922_9 membrane - - - 0.00000000000000000000000000000000000000000000000000000001462 203.0
CMS3_k127_999767_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1042.0
CMS3_k127_999767_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 536.0
CMS3_k127_999767_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000001152 241.0
CMS3_k127_999767_3 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000003703 227.0
CMS3_k127_999767_4 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000002089 223.0