logo

Overview

ID MAG00506
Name CMS3_bin.138
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Thiohalomonadales
Family Thiohalomonadaceae
Genus JBFEYJ01
Species
Assembly information
Completeness (%) 97.29
Contamination (%) 4.05
GC content (%) 58.0
N50 (bp) 29,289
Genome size (bp) 3,859,859

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3427

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1013080_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000004505 113.0
CMS3_k127_1021599_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 4.683e-280 884.0
CMS3_k127_1021599_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.695e-246 767.0
CMS3_k127_1021599_10 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 368.0
CMS3_k127_1021599_11 pfam mofrl K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 371.0
CMS3_k127_1021599_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 359.0
CMS3_k127_1021599_13 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 336.0
CMS3_k127_1021599_14 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 324.0
CMS3_k127_1021599_15 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 316.0
CMS3_k127_1021599_16 FimV C-terminal K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 333.0
CMS3_k127_1021599_17 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009491 271.0
CMS3_k127_1021599_18 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001567 234.0
CMS3_k127_1021599_19 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000000000002582 194.0
CMS3_k127_1021599_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.25e-239 749.0
CMS3_k127_1021599_20 Domain of unknown function (DUF1853) K09977 - - 0.00000000000000000000000000000000000000000000000006436 191.0
CMS3_k127_1021599_21 - - - - 0.000000000000000000000000000000000007354 145.0
CMS3_k127_1021599_22 Sporulation related domain K03749 - - 0.0000000000000000000000003035 112.0
CMS3_k127_1021599_23 Protein required for attachment to host cells - - - 0.00000000000000000000001696 105.0
CMS3_k127_1021599_24 Phage Tail Collar Domain - - - 0.0000000000000166 76.0
CMS3_k127_1021599_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 4.521e-217 678.0
CMS3_k127_1021599_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.093e-207 649.0
CMS3_k127_1021599_5 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 3.796e-194 613.0
CMS3_k127_1021599_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 582.0
CMS3_k127_1021599_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 443.0
CMS3_k127_1021599_8 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000547 434.0
CMS3_k127_1021599_9 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 372.0
CMS3_k127_1021679_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1086.0
CMS3_k127_1021679_1 HELICc2 K03722 GO:0003674,GO:0003824,GO:0004386,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:1901360 3.6.4.12 8.286e-252 792.0
CMS3_k127_1021679_10 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 315.0
CMS3_k127_1021679_11 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 295.0
CMS3_k127_1021679_12 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001966 274.0
CMS3_k127_1021679_13 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001898 263.0
CMS3_k127_1021679_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001641 224.0
CMS3_k127_1021679_15 YsiA-like protein, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000007784 224.0
CMS3_k127_1021679_16 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.00000000000000000000000000000000000000000000000000000000000003861 235.0
CMS3_k127_1021679_17 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000004109 212.0
CMS3_k127_1021679_18 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000002251 199.0
CMS3_k127_1021679_19 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000003658 187.0
CMS3_k127_1021679_2 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 4.136e-227 711.0
CMS3_k127_1021679_20 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000007236 187.0
CMS3_k127_1021679_21 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000001205 190.0
CMS3_k127_1021679_22 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.00000000000000000000000000000000000000000000006793 171.0
CMS3_k127_1021679_23 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000000000004326 169.0
CMS3_k127_1021679_24 - - - - 0.0000000000000000000000000000000000002213 146.0
CMS3_k127_1021679_25 pathogenesis - - - 0.0000000000000000000000000006304 121.0
CMS3_k127_1021679_26 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000153 99.0
CMS3_k127_1021679_27 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000001017 76.0
CMS3_k127_1021679_28 Cytochrome C' - - - 0.0000000000001963 76.0
CMS3_k127_1021679_3 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 591.0
CMS3_k127_1021679_4 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 565.0
CMS3_k127_1021679_5 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 503.0
CMS3_k127_1021679_6 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 494.0
CMS3_k127_1021679_7 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 476.0
CMS3_k127_1021679_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 436.0
CMS3_k127_1021679_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 423.0
CMS3_k127_1028969_0 Parallel beta-helix repeats - - - 0.0 1328.0
CMS3_k127_1028969_1 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000009625 222.0
CMS3_k127_1028969_2 Cyclopropane-fatty-acyl-phospholipid synthase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000004495 205.0
CMS3_k127_1028969_3 ketosteroid isomerase - - - 0.000000000000000000000000000000000000000000000202 176.0
CMS3_k127_1028969_4 - - - - 0.00000000000000000003076 96.0
CMS3_k127_1028969_5 Putative diguanylate phosphodiesterase - - - 0.000002064 51.0
CMS3_k127_1033779_0 High confidence in function and specificity K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 486.0
CMS3_k127_1037841_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000001003 153.0
CMS3_k127_1037841_1 Histidine kinase K00936,K01719,K01768,K02030,K02584,K10441,K13924,K20962 - 2.1.1.80,2.7.13.3,3.1.1.61,3.1.4.52,3.6.3.17,4.2.1.75,4.6.1.1 0.0000000000000000000000000000000000000005176 160.0
CMS3_k127_1040851_0 cytochrome c biogenesis protein - - - 6.153e-229 720.0
CMS3_k127_1047196_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 1.347e-289 893.0
CMS3_k127_1047390_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 1.33e-276 861.0
CMS3_k127_1047390_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 1.773e-226 711.0
CMS3_k127_1047390_2 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000002597 165.0
CMS3_k127_1047390_3 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000001199 145.0
CMS3_k127_1047390_4 bacterial OsmY and nodulation domain - - - 0.0000000007539 64.0
CMS3_k127_1047870_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000001823 149.0
CMS3_k127_1051695_0 PFAM Integrase, catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 597.0
CMS3_k127_1051695_1 PFAM IstB domain protein ATP-binding protein - - - 0.0000000000000000000002592 104.0
CMS3_k127_1051695_2 Transcriptional regulator - - - 0.0000000003953 66.0
CMS3_k127_1051695_3 Helix-turn-helix domain - - - 0.0004226 45.0
CMS3_k127_10537_0 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 402.0
CMS3_k127_10537_1 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008755 278.0
CMS3_k127_10537_2 PFAM Transcriptional regulator, TetR-like, DNA-binding, bacterial archaeal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005731 248.0
CMS3_k127_1059506_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 308.0
CMS3_k127_1059506_1 peptidase S15 K06978 - - 0.000000000000000000000000000000000000000000000000001085 186.0
CMS3_k127_1070504_0 Translation Initiation Inhibitor YjgF Family K09022 - 3.5.99.10 0.000000000000000000000003485 106.0
CMS3_k127_1070504_1 Asp/Glu/Hydantoin racemase K16841 - 5.1.99.3 0.0000000000001601 78.0
CMS3_k127_1075953_0 DNA RNA helicase - - - 0.0 1179.0
CMS3_k127_1075953_1 DbpA RNA binding domain K05591 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 552.0
CMS3_k127_1075953_11 - - - - 0.00000000000000000000000000000000007565 140.0
CMS3_k127_1075953_12 Thioredoxin - - - 0.00000000000000000000000000006091 119.0
CMS3_k127_1075953_13 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000059 104.0
CMS3_k127_1075953_14 EamA-like transporter family - - - 0.000000000000000000001982 95.0
CMS3_k127_1075953_15 Belongs to the ompA family K03286 - - 0.0000000000000000006464 92.0
CMS3_k127_1075953_17 - - - - 0.000000000000007002 81.0
CMS3_k127_1075953_18 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.000000004082 63.0
CMS3_k127_1075953_19 PFAM Sporulation - - - 0.00000001574 64.0
CMS3_k127_1075953_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 447.0
CMS3_k127_1075953_3 Histidine kinase K07638 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 310.0
CMS3_k127_1075953_4 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 291.0
CMS3_k127_1075953_5 Transcriptional regulatory protein, C terminal K07659 GO:0000156,GO:0000160,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0035556,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 289.0
CMS3_k127_1075953_6 protein domain (DUF2202) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003626 251.0
CMS3_k127_1075953_7 17 kDa outer membrane surface antigen - - - 0.00000000000000000000000000000000000000000000000000000005069 201.0
CMS3_k127_1075953_8 redox protein regulator of disulfide bond formation K04063 - - 0.0000000000000000000000000000000000000000000009704 169.0
CMS3_k127_1075953_9 surface antigen - - - 0.000000000000000000000000000000000000000000004569 173.0
CMS3_k127_1104599_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 293.0
CMS3_k127_1164161_0 COG4962 Flp pilus assembly protein, ATPase CpaF K02283 - - 1.25e-233 730.0
CMS3_k127_1164161_1 ATPases associated with a variety of cellular activities - - - 7.486e-221 694.0
CMS3_k127_1164161_10 Protein of unknown function (DUF1109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004775 269.0
CMS3_k127_1164161_11 TadE-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004104 232.0
CMS3_k127_1164161_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000005772 224.0
CMS3_k127_1164161_13 TadE-like protein - - - 0.00000000000000000000000000000000000000000000000000000005351 199.0
CMS3_k127_1164161_14 Type IV leader peptidase family K02278 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000001556 194.0
CMS3_k127_1164161_17 Flp Fap pilin component K02651 - - 0.0000000007021 64.0
CMS3_k127_1164161_2 Belongs to the GSP D family K02280 - - 1.675e-213 675.0
CMS3_k127_1164161_3 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 575.0
CMS3_k127_1164161_4 Cellulose biosynthesis protein BcsQ K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 526.0
CMS3_k127_1164161_5 Type II secretion system (T2SS), protein F K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 470.0
CMS3_k127_1164161_6 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009428 470.0
CMS3_k127_1164161_7 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008302 393.0
CMS3_k127_1164161_8 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 372.0
CMS3_k127_1164161_9 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 331.0
CMS3_k127_1170037_0 Polyphosphate AMP phosphotransferase - - - 6.169e-200 643.0
CMS3_k127_1170037_1 Thioredoxin domain - - - 0.000000000000000000000000000000000000000000000002246 181.0
CMS3_k127_1170037_2 - - - - 0.00000000000000000000000000000003663 130.0
CMS3_k127_1170037_3 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000007214 121.0
CMS3_k127_1170037_4 - - - - 0.000000000002248 69.0
CMS3_k127_1173943_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002847 222.0
CMS3_k127_1173943_1 - - - - 0.000000000000001696 78.0
CMS3_k127_1173943_2 - - - - 0.0000000000001949 71.0
CMS3_k127_1173943_3 - - - - 0.000000005931 61.0
CMS3_k127_1175705_0 SPTR Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 374.0
CMS3_k127_1175705_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000005853 78.0
CMS3_k127_1175705_2 Arm DNA-binding domain - - - 0.000000000000203 76.0
CMS3_k127_117975_0 - - - - 0.00000000000002822 74.0
CMS3_k127_1182579_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2054.0
CMS3_k127_1182579_1 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 4.338e-236 736.0
CMS3_k127_1182579_10 AAA domain K03112 - - 0.000000001862 68.0
CMS3_k127_1182579_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 586.0
CMS3_k127_1182579_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 507.0
CMS3_k127_1182579_4 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 501.0
CMS3_k127_1182579_5 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 392.0
CMS3_k127_1182579_6 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001193 262.0
CMS3_k127_1182579_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000002908 179.0
CMS3_k127_1182579_8 CDP-archaeol synthase K19664 - 2.7.7.67 0.00000000000000000000000000000000000003636 148.0
CMS3_k127_1182579_9 - - - - 0.0000000000000000000168 93.0
CMS3_k127_118806_0 Transposase domain (DUF772) K07487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 487.0
CMS3_k127_1219839_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 346.0
CMS3_k127_1219839_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000007452 75.0
CMS3_k127_1235821_0 Domain of unknown function (DUF4338) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003925 259.0
CMS3_k127_1235821_1 - - - - 0.000000000000003957 88.0
CMS3_k127_1235821_2 ABC transporter transmembrane region K06147 - - 0.0000000000001843 78.0
CMS3_k127_1239150_0 Histidine kinase - - - 0.0000000000000000001076 100.0
CMS3_k127_1239150_1 Histidine kinase - - - 0.000000000001078 69.0
CMS3_k127_1247087_0 (ABC) transporter K13926 - - 0.0 1061.0
CMS3_k127_1247087_1 ABC-2 type transporter K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 356.0
CMS3_k127_1247087_2 COG0845 Membrane-fusion protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002493 282.0
CMS3_k127_1247087_3 COG1943 Transposase and inactivated derivatives - - - 0.000003978 51.0
CMS3_k127_1252828_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 6.064e-286 887.0
CMS3_k127_1252828_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.4e-282 871.0
CMS3_k127_1252828_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000209 132.0
CMS3_k127_1252828_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 607.0
CMS3_k127_1252828_3 ATP synthase A chain K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 436.0
CMS3_k127_1252828_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 428.0
CMS3_k127_1252828_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 373.0
CMS3_k127_1252828_6 Chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 356.0
CMS3_k127_1252828_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000003438 235.0
CMS3_k127_1252828_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000002111 219.0
CMS3_k127_1252828_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000007899 197.0
CMS3_k127_126112_0 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 1.83e-303 946.0
CMS3_k127_126112_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 418.0
CMS3_k127_126112_2 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000002164 225.0
CMS3_k127_126112_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000004384 201.0
CMS3_k127_126112_4 Domain of unknown function (DUF4785) - - - 0.0000000000000000000000000000000000000000000000000003302 200.0
CMS3_k127_1278330_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 2.245e-316 980.0
CMS3_k127_1278330_1 PFAM peptidase K08303 - - 2.042e-218 684.0
CMS3_k127_1278330_10 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 286.0
CMS3_k127_1278330_11 Bacterial transferase hexapeptide (six repeats) - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0009987,GO:0016043,GO:0022607,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000735 235.0
CMS3_k127_1278330_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000005326 218.0
CMS3_k127_1278330_13 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000000000000000000000000000000003345 192.0
CMS3_k127_1278330_14 PFAM toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000001005 171.0
CMS3_k127_1278330_15 GDYXXLXY protein - - - 0.00000000000000000000000000003496 130.0
CMS3_k127_1278330_16 Chemoreceptor zinc-binding domain - - - 0.0000000000000000000000001686 110.0
CMS3_k127_1278330_17 Chemoreceptor zinc-binding domain - - - 0.00000000000000003285 86.0
CMS3_k127_1278330_2 STAS domain K03321 - - 8.092e-209 664.0
CMS3_k127_1278330_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 1.177e-200 633.0
CMS3_k127_1278330_4 PFAM phosphate transporter K03306 - - 4.376e-194 612.0
CMS3_k127_1278330_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007996 532.0
CMS3_k127_1278330_6 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 398.0
CMS3_k127_1278330_7 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 377.0
CMS3_k127_1278330_8 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 342.0
CMS3_k127_1278330_9 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 344.0
CMS3_k127_1282806_0 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 390.0
CMS3_k127_1282806_1 anaphase-promoting complex binding - - - 0.00000000000000000000000000000000003541 156.0
CMS3_k127_1282806_2 - - - - 0.000000000000000000000000008052 116.0
CMS3_k127_1286682_0 PFAM periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000001225 149.0
CMS3_k127_1296489_0 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 553.0
CMS3_k127_1296489_1 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 352.0
CMS3_k127_1296489_2 - K01992 - - 0.000000000000000000003137 101.0
CMS3_k127_1296489_3 Protein of unknown function (DUF1156) K07445 - - 0.00000000000072 68.0
CMS3_k127_1296489_4 ABC-type multidrug transport system ATPase component K01990 - - 0.0000002827 53.0
CMS3_k127_1321908_0 drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 482.0
CMS3_k127_1321908_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 467.0
CMS3_k127_1321908_10 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003263 250.0
CMS3_k127_1321908_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000477 241.0
CMS3_k127_1321908_12 Redox protein regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000002509 219.0
CMS3_k127_1321908_13 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000001561 208.0
CMS3_k127_1321908_14 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001687 196.0
CMS3_k127_1321908_15 Ferredoxin - - - 0.0000000000000000000000000000000000000000000003058 168.0
CMS3_k127_1321908_16 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000004236 115.0
CMS3_k127_1321908_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 450.0
CMS3_k127_1321908_3 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 361.0
CMS3_k127_1321908_4 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 361.0
CMS3_k127_1321908_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 334.0
CMS3_k127_1321908_6 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 323.0
CMS3_k127_1321908_7 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 324.0
CMS3_k127_1321908_8 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 300.0
CMS3_k127_1321908_9 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 271.0
CMS3_k127_1338158_0 Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000000005027 137.0
CMS3_k127_1338158_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.00000000000000000001619 107.0
CMS3_k127_1338158_2 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.0002806 51.0
CMS3_k127_136375_0 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 309.0
CMS3_k127_136375_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000001274 209.0
CMS3_k127_136375_2 Cupin domain - - - 0.000000000000000000000000000000000000000000002274 168.0
CMS3_k127_136375_3 glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000001041 146.0
CMS3_k127_136375_4 protein conserved in bacteria - - - 0.000000000000000000000000000000003439 135.0
CMS3_k127_136375_5 - - - - 0.0000004094 57.0
CMS3_k127_136375_6 Protein of unknown function (DUF4242) - - - 0.00004098 46.0
CMS3_k127_1367634_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006179 260.0
CMS3_k127_1367634_1 helix_turn_helix, Lux Regulon K11618 - - 0.000000000000000000006776 95.0
CMS3_k127_1379017_0 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
CMS3_k127_1379017_1 Belongs to the UPF0246 family K09861 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 352.0
CMS3_k127_1379017_2 Uncharacterised conserved protein (DUF2156) K01163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007671 261.0
CMS3_k127_1379017_3 - - - - 0.00000000000000000000000000000000007544 139.0
CMS3_k127_1379017_4 phosphoprotein phosphatase activity - - - 0.0000000000000001907 87.0
CMS3_k127_1379017_5 PFAM RNA recognition motif - - - 0.000001894 53.0
CMS3_k127_1379017_6 - - - - 0.0002187 46.0
CMS3_k127_1386543_0 glycoside hydrolase family 2 sugar binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 484.0
CMS3_k127_1387445_0 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 347.0
CMS3_k127_1387445_1 PFAM IstB-like ATP binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006577 257.0
CMS3_k127_1387445_2 trisaccharide binding K03556 - - 0.000003141 53.0
CMS3_k127_1409115_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 1.221e-238 752.0
CMS3_k127_1409115_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 4.785e-198 623.0
CMS3_k127_1409115_2 Queuosine biosynthesis protein K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 468.0
CMS3_k127_1409115_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 400.0
CMS3_k127_1409115_4 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000006989 254.0
CMS3_k127_1409115_5 Haemolysin secretion/activation protein ShlB/FhaC/HecB - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001769 194.0
CMS3_k127_1409115_6 Preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000000009565 130.0
CMS3_k127_144130_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1167.0
CMS3_k127_144130_1 Molecular chaperone. Has ATPase activity K04079 - - 1.85e-300 932.0
CMS3_k127_144130_10 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 507.0
CMS3_k127_144130_11 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 512.0
CMS3_k127_144130_12 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 482.0
CMS3_k127_144130_13 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 469.0
CMS3_k127_144130_14 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 454.0
CMS3_k127_144130_15 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 407.0
CMS3_k127_144130_16 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 402.0
CMS3_k127_144130_17 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 396.0
CMS3_k127_144130_18 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 394.0
CMS3_k127_144130_19 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 373.0
CMS3_k127_144130_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.633e-299 934.0
CMS3_k127_144130_20 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 344.0
CMS3_k127_144130_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 338.0
CMS3_k127_144130_22 PFAM pfkB family carbohydrate kinase K00846 - 2.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 305.0
CMS3_k127_144130_23 RimK-like ATP-grasp domain K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 302.0
CMS3_k127_144130_24 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001231 282.0
CMS3_k127_144130_25 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003779 240.0
CMS3_k127_144130_26 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000001607 242.0
CMS3_k127_144130_27 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000005647 234.0
CMS3_k127_144130_28 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000003306 201.0
CMS3_k127_144130_29 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.000000000000000000000000000000000000000000000000000000168 204.0
CMS3_k127_144130_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835 - 5.4.2.2 1.444e-251 786.0
CMS3_k127_144130_30 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001891 197.0
CMS3_k127_144130_31 pfam nudix K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000233 190.0
CMS3_k127_144130_32 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000004005 184.0
CMS3_k127_144130_33 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000001942 182.0
CMS3_k127_144130_34 possibly involved in cell wall synthesis K06925 GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000005466 182.0
CMS3_k127_144130_35 membrane - - - 0.0000000000000000000000000000000000000000000005432 178.0
CMS3_k127_144130_36 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000000000000000000000000001003 160.0
CMS3_k127_144130_37 Belongs to the HSP15 family K04762 - - 0.0000000000000000000000000000000000001854 145.0
CMS3_k127_144130_38 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000001029 139.0
CMS3_k127_144130_39 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000004233 136.0
CMS3_k127_144130_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.128e-217 681.0
CMS3_k127_144130_40 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000004287 135.0
CMS3_k127_144130_41 NlpC/P60 family - - - 0.00000000000000000000000000000001476 134.0
CMS3_k127_144130_42 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000009071 86.0
CMS3_k127_144130_43 protein conserved in bacteria K09937 - - 0.0000000001017 64.0
CMS3_k127_144130_5 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 8.331e-212 666.0
CMS3_k127_144130_6 associated with various cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 586.0
CMS3_k127_144130_7 Putative metallopeptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 527.0
CMS3_k127_144130_8 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 521.0
CMS3_k127_144130_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 525.0
CMS3_k127_1492725_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 0.0 1086.0
CMS3_k127_1492725_1 peroxiredoxin glutaredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 384.0
CMS3_k127_1492725_10 Glycine zipper - - - 0.000000000000000000000000000001204 130.0
CMS3_k127_1492725_11 Phospholipase_D-nuclease N-terminal - - - 0.0000000000000000000008676 95.0
CMS3_k127_1492725_12 - - - - 0.0000000004926 64.0
CMS3_k127_1492725_13 Multicopper oxidase K06324 - 1.16.3.3 0.00004522 49.0
CMS3_k127_1492725_14 Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol K00559 GO:0003674,GO:0003824,GO:0003838,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005811,GO:0005886,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008202,GO:0008204,GO:0008610,GO:0008757,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016740,GO:0016741,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032259,GO:0035690,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0071944,GO:0097384,GO:0098588,GO:0098805,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653 2.1.1.41 0.0004185 44.0
CMS3_k127_1492725_15 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0006911 42.0
CMS3_k127_1492725_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 382.0
CMS3_k127_1492725_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008534,GO:0009987,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 368.0
CMS3_k127_1492725_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 362.0
CMS3_k127_1492725_5 EcsC protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
CMS3_k127_1492725_6 Transcriptional regulator K04761 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0001130,GO:0001131,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0033554,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 296.0
CMS3_k127_1492725_7 - - - - 0.00000000000000000000000000000000000000000001058 171.0
CMS3_k127_1492725_8 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000002658 163.0
CMS3_k127_1492725_9 Protein of unknown function, DUF484 - - - 0.0000000000000000000000000000000000000001387 160.0
CMS3_k127_1499678_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 592.0
CMS3_k127_1499678_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 537.0
CMS3_k127_1499678_10 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000000000000000000000000000002293 166.0
CMS3_k127_1499678_11 membrane - - - 0.000000000000000000000000000000000000000002166 159.0
CMS3_k127_1499678_12 - - - - 0.0000005189 53.0
CMS3_k127_1499678_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 494.0
CMS3_k127_1499678_3 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 471.0
CMS3_k127_1499678_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 436.0
CMS3_k127_1499678_5 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 404.0
CMS3_k127_1499678_6 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 358.0
CMS3_k127_1499678_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019538,GO:0030163,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0052689,GO:0071704,GO:0140098,GO:0140101,GO:1901564,GO:1901565,GO:1901575 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000004736 262.0
CMS3_k127_1499678_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 249.0
CMS3_k127_1499678_9 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000005496 217.0
CMS3_k127_15008_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 389.0
CMS3_k127_1501512_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2220.0
CMS3_k127_1501512_1 DNA polymerase III alpha subunit K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1492.0
CMS3_k127_1501512_10 homoserine dehydrogenase K00003 - 1.1.1.3 1.322e-210 661.0
CMS3_k127_1501512_11 threonine synthase K01733 - 4.2.3.1 7.947e-210 656.0
CMS3_k127_1501512_12 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.429e-195 617.0
CMS3_k127_1501512_13 Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 604.0
CMS3_k127_1501512_14 Histidine kinase K07673,K07674 GO:0000155,GO:0000160,GO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010167,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0033554,GO:0035556,GO:0036211,GO:0042221,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071229,GO:0071241,GO:0071249,GO:0071250,GO:0071704,GO:0071944,GO:0080033,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 604.0
CMS3_k127_1501512_15 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 546.0
CMS3_k127_1501512_16 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 532.0
CMS3_k127_1501512_17 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 505.0
CMS3_k127_1501512_18 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 468.0
CMS3_k127_1501512_19 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 456.0
CMS3_k127_1501512_2 nitrate nitrite transporter K02575 - - 0.0 1002.0
CMS3_k127_1501512_20 General secretory system II, protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 456.0
CMS3_k127_1501512_21 PFAM oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 439.0
CMS3_k127_1501512_22 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 427.0
CMS3_k127_1501512_23 TIGRFAM RNA polymerase sigma factor RpoS K03087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 420.0
CMS3_k127_1501512_24 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 400.0
CMS3_k127_1501512_25 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 401.0
CMS3_k127_1501512_26 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 376.0
CMS3_k127_1501512_27 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 377.0
CMS3_k127_1501512_28 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 372.0
CMS3_k127_1501512_29 Bacterial type II and III secretion system protein K02453,K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 393.0
CMS3_k127_1501512_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5e-324 1013.0
CMS3_k127_1501512_30 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 365.0
CMS3_k127_1501512_31 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 342.0
CMS3_k127_1501512_32 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 336.0
CMS3_k127_1501512_33 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 331.0
CMS3_k127_1501512_34 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 329.0
CMS3_k127_1501512_35 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 331.0
CMS3_k127_1501512_36 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 322.0
CMS3_k127_1501512_37 PFAM O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 308.0
CMS3_k127_1501512_38 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 297.0
CMS3_k127_1501512_39 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 293.0
CMS3_k127_1501512_4 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 7.195e-284 878.0
CMS3_k127_1501512_40 helix_turn_helix, Lux Regulon K07684 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090352,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903314,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 291.0
CMS3_k127_1501512_41 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001616 283.0
CMS3_k127_1501512_42 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004917 280.0
CMS3_k127_1501512_43 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005681 261.0
CMS3_k127_1501512_44 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000001355 253.0
CMS3_k127_1501512_45 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000008299 252.0
CMS3_k127_1501512_46 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000001816 239.0
CMS3_k127_1501512_47 Peptidase family M23 K06194 - - 0.0000000000000000000000000000000000000000000000000000000000002117 221.0
CMS3_k127_1501512_48 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000002804 218.0
CMS3_k127_1501512_49 Nitrate reductase delta subunit K00373 - - 0.000000000000000000000000000000000000000000000000000000001062 208.0
CMS3_k127_1501512_5 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.426e-282 878.0
CMS3_k127_1501512_50 Smr protein - - - 0.000000000000000000000000000000000000000000000000000000001835 205.0
CMS3_k127_1501512_51 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000001226 201.0
CMS3_k127_1501512_52 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000037 186.0
CMS3_k127_1501512_53 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000000000000000000000000000000003272 172.0
CMS3_k127_1501512_54 PFAM type II secretion system protein G K02456 - - 0.0000000000000000000000000000000000000000004203 162.0
CMS3_k127_1501512_55 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000006654 148.0
CMS3_k127_1501512_56 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000872 132.0
CMS3_k127_1501512_57 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.000000000000000000000000003337 112.0
CMS3_k127_1501512_58 Type II secretion system protein G K02456 - - 0.00000000000000000000000316 108.0
CMS3_k127_1501512_59 Type II secretory pathway, pseudopilin - - - 0.000000000000000000000005965 110.0
CMS3_k127_1501512_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.044e-244 784.0
CMS3_k127_1501512_60 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000001364 102.0
CMS3_k127_1501512_7 aminotransferase class I and II K14261 - - 5.451e-228 710.0
CMS3_k127_1501512_8 DHH family K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 3.768e-227 719.0
CMS3_k127_1501512_9 Aminotransferase AlaT K14260 - 2.6.1.2,2.6.1.66 7.382e-226 704.0
CMS3_k127_1506140_0 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 317.0
CMS3_k127_1513998_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 466.0
CMS3_k127_1513998_1 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 370.0
CMS3_k127_1513998_2 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 357.0
CMS3_k127_1513998_3 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 352.0
CMS3_k127_1513998_4 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 314.0
CMS3_k127_1520917_0 PFAM Integrase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 370.0
CMS3_k127_1520917_1 transposase activity K07483,K07497 - - 0.000000000000000000000000000000000000000000001557 166.0
CMS3_k127_1545606_0 L COG2826 Transposase and inactivated derivatives, IS30 family K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 561.0
CMS3_k127_1545606_1 Acetyl-coenzyme A transporter 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004384 259.0
CMS3_k127_1556880_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.709e-229 724.0
CMS3_k127_1556880_1 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.000000000000000000000000000000000000000000000000000000000000005679 221.0
CMS3_k127_1556880_2 protein related to plant photosystem II stability assembly factor - - - 0.000005319 59.0
CMS3_k127_1572683_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 462.0
CMS3_k127_1572683_1 PFAM Transposase, IS204 IS1001 IS1096 IS1165 K07485 - - 0.00000000000000000187 87.0
CMS3_k127_1590980_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 305.0
CMS3_k127_1607843_0 transposition, DNA-mediated K02529,K20971 - - 0.000000000000000000000000000000000000000000000000000000000007808 225.0
CMS3_k127_1611391_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 556.0
CMS3_k127_1611391_1 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 402.0
CMS3_k127_1611391_2 Secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004861 269.0
CMS3_k127_1611391_3 ABC-2 family transporter protein - - - 0.0000000000000000000000000002019 125.0
CMS3_k127_1619855_0 similarity to SP Q54513 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001584 289.0
CMS3_k127_1656739_0 GTP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 497.0
CMS3_k127_1656739_1 Acetyl xylan esterase (AXE1) - - - 0.000000000000000633 81.0
CMS3_k127_1712045_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.573e-195 619.0
CMS3_k127_1712045_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 GO:0003674,GO:0003824,GO:0004652,GO:0004810,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0070566,GO:0071704,GO:0090304,GO:1901360,GO:1990817 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 448.0
CMS3_k127_1712045_2 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 396.0
CMS3_k127_1712045_3 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 379.0
CMS3_k127_1712045_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 306.0
CMS3_k127_1712045_5 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000001264 252.0
CMS3_k127_1723391_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 3.416e-259 810.0
CMS3_k127_1788140_0 Transposase Tn5 dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 484.0
CMS3_k127_1788140_1 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000003771 58.0
CMS3_k127_181368_0 Transposase IS66 family K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009631 493.0
CMS3_k127_181368_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000002309 71.0
CMS3_k127_181368_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.00000000002461 70.0
CMS3_k127_190941_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 440.0
CMS3_k127_190941_1 Transcriptional regulator - - - 0.0000000000000000000001427 115.0
CMS3_k127_190941_2 PFAM transcriptional activator domain - - - 0.00000000000002625 88.0
CMS3_k127_1916482_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000001443 218.0
CMS3_k127_1929888_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1337.0
CMS3_k127_1929888_1 FtsX-like permease family K02004 - - 5.043e-300 938.0
CMS3_k127_1929888_10 PFAM Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000001455 239.0
CMS3_k127_1929888_11 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000000001755 205.0
CMS3_k127_1929888_12 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00008326 45.0
CMS3_k127_1929888_2 AMP-binding enzyme C-terminal domain K00666 - - 1.618e-269 840.0
CMS3_k127_1929888_3 Beta-Casp domain K07576 - - 3.259e-203 643.0
CMS3_k127_1929888_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 600.0
CMS3_k127_1929888_5 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 405.0
CMS3_k127_1929888_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 368.0
CMS3_k127_1929888_7 Dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002893 264.0
CMS3_k127_1929888_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000346 255.0
CMS3_k127_1929888_9 modification enzyme, MiaB family K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000008204 255.0
CMS3_k127_1931900_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1213.0
CMS3_k127_1931900_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.8e-291 904.0
CMS3_k127_1931900_10 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006678 425.0
CMS3_k127_1931900_11 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 372.0
CMS3_k127_1931900_12 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 355.0
CMS3_k127_1931900_13 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 335.0
CMS3_k127_1931900_14 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 315.0
CMS3_k127_1931900_15 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 317.0
CMS3_k127_1931900_16 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 315.0
CMS3_k127_1931900_17 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 288.0
CMS3_k127_1931900_18 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000004132 237.0
CMS3_k127_1931900_19 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000006962 228.0
CMS3_k127_1931900_2 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 3.545e-274 853.0
CMS3_k127_1931900_20 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000002132 225.0
CMS3_k127_1931900_21 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000001926 204.0
CMS3_k127_1931900_22 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000008649 195.0
CMS3_k127_1931900_23 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000004838 190.0
CMS3_k127_1931900_24 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000002152 186.0
CMS3_k127_1931900_25 - - - - 0.00000000000000000000003264 109.0
CMS3_k127_1931900_26 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000001694 90.0
CMS3_k127_1931900_27 - - - - 0.0000000000000002777 80.0
CMS3_k127_1931900_28 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000008363 60.0
CMS3_k127_1931900_29 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0001133 44.0
CMS3_k127_1931900_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 2.068e-239 747.0
CMS3_k127_1931900_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.128e-233 730.0
CMS3_k127_1931900_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 562.0
CMS3_k127_1931900_6 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 539.0
CMS3_k127_1931900_7 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 528.0
CMS3_k127_1931900_8 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 451.0
CMS3_k127_1931900_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 447.0
CMS3_k127_1956121_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 2.134e-321 992.0
CMS3_k127_1956121_1 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 544.0
CMS3_k127_1956121_10 transcriptional regulator K16137 - - 0.000000000000000000000000000000000000000000005949 170.0
CMS3_k127_1956121_11 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000008755 123.0
CMS3_k127_1956121_12 protein conserved in bacteria - - - 0.0000000000000000000000000003727 118.0
CMS3_k127_1956121_2 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 425.0
CMS3_k127_1956121_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 375.0
CMS3_k127_1956121_4 COG1538 Outer membrane protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 379.0
CMS3_k127_1956121_5 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 372.0
CMS3_k127_1956121_6 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 330.0
CMS3_k127_1956121_7 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001319 287.0
CMS3_k127_1956121_8 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000006779 248.0
CMS3_k127_1956121_9 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.0000000000000000000000000000000000000000000000000000008178 200.0
CMS3_k127_1960923_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 2.971e-272 855.0
CMS3_k127_1960923_1 PFAM AsmA family protein K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 498.0
CMS3_k127_1960923_10 Penicillin-insensitive murein endopeptidase K07261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 308.0
CMS3_k127_1960923_11 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000007351 258.0
CMS3_k127_1960923_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003962 244.0
CMS3_k127_1960923_13 WHG domain - - - 0.000000000000000000000000000000000000000000006665 169.0
CMS3_k127_1960923_14 MazG-like family - - - 0.00000000000000000000000000000000000000000001596 165.0
CMS3_k127_1960923_15 membrane - - - 0.00000000000000000000000000000006919 128.0
CMS3_k127_1960923_16 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000000000004068 111.0
CMS3_k127_1960923_17 ThiS family K03154 - - 0.00000000000000001406 84.0
CMS3_k127_1960923_18 Bacterial protein of unknown function (DUF924) - - - 0.0000000000000003303 78.0
CMS3_k127_1960923_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 443.0
CMS3_k127_1960923_20 Desiccation protectant protein Lea14 homolog - GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006952,GO:0008150,GO:0009314,GO:0009416,GO:0009605,GO:0009607,GO:0009611,GO:0009620,GO:0009628,GO:0009642,GO:0009644,GO:0016020,GO:0043207,GO:0044424,GO:0044444,GO:0044464,GO:0048046,GO:0050832,GO:0050896,GO:0051704,GO:0051707,GO:0071944,GO:0098542 - 0.000001682 59.0
CMS3_k127_1960923_3 Amidohydrolase K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 450.0
CMS3_k127_1960923_4 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 419.0
CMS3_k127_1960923_5 PFAM Major Facilitator Superfamily K08227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 411.0
CMS3_k127_1960923_6 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 362.0
CMS3_k127_1960923_7 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 359.0
CMS3_k127_1960923_8 PhnA domain K06193 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 329.0
CMS3_k127_1960923_9 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 305.0
CMS3_k127_1969755_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 320.0
CMS3_k127_1969755_1 transposition K07497 - - 0.000000000000000000000000000007062 126.0
CMS3_k127_1994959_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1498.0
CMS3_k127_1994959_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.921e-218 684.0
CMS3_k127_1994959_10 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 363.0
CMS3_k127_1994959_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 322.0
CMS3_k127_1994959_12 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 322.0
CMS3_k127_1994959_13 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 296.0
CMS3_k127_1994959_14 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 265.0
CMS3_k127_1994959_15 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007063 263.0
CMS3_k127_1994959_16 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004019 246.0
CMS3_k127_1994959_17 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001173 243.0
CMS3_k127_1994959_18 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000116 237.0
CMS3_k127_1994959_19 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000001101 226.0
CMS3_k127_1994959_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 6.721e-200 634.0
CMS3_k127_1994959_20 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
CMS3_k127_1994959_21 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000000009019 216.0
CMS3_k127_1994959_22 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001386 211.0
CMS3_k127_1994959_23 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000001521 209.0
CMS3_k127_1994959_24 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000004824 195.0
CMS3_k127_1994959_25 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000603 195.0
CMS3_k127_1994959_26 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000002036 193.0
CMS3_k127_1994959_27 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000008708 184.0
CMS3_k127_1994959_28 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000003235 175.0
CMS3_k127_1994959_29 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000001315 173.0
CMS3_k127_1994959_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0000287,GO:0003674,GO:0003824,GO:0004349,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019202,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0055129,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901973 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 520.0
CMS3_k127_1994959_30 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000003759 164.0
CMS3_k127_1994959_31 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000007492 161.0
CMS3_k127_1994959_32 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000001507 156.0
CMS3_k127_1994959_33 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000002809 145.0
CMS3_k127_1994959_34 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000006909 137.0
CMS3_k127_1994959_35 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003086 137.0
CMS3_k127_1994959_36 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000002842 107.0
CMS3_k127_1994959_37 Ribosomal protein L30 K02907 - - 0.00000000000000000000002972 99.0
CMS3_k127_1994959_38 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000007456 97.0
CMS3_k127_1994959_39 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000000001297 89.0
CMS3_k127_1994959_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0022611,GO:0022613,GO:0022618,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0043021,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0090069,GO:0090071,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 502.0
CMS3_k127_1994959_40 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000002751 75.0
CMS3_k127_1994959_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 496.0
CMS3_k127_1994959_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 481.0
CMS3_k127_1994959_7 major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 478.0
CMS3_k127_1994959_8 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 443.0
CMS3_k127_1994959_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 364.0
CMS3_k127_2007374_0 Serine Threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 377.0
CMS3_k127_2007374_1 - - - - 0.00000000000000000000002324 104.0
CMS3_k127_2022264_0 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000009698 175.0
CMS3_k127_2022264_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000005214 126.0
CMS3_k127_2028870_0 nitric oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 325.0
CMS3_k127_2028870_1 COG1309 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000007591 186.0
CMS3_k127_2028945_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 2.878e-221 692.0
CMS3_k127_2028945_1 ACT domain K00928 GO:0003674,GO:0003824,GO:0004072,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019491,GO:0019752,GO:0032787,GO:0042399,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 5.738e-212 668.0
CMS3_k127_2028945_10 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000003185 235.0
CMS3_k127_2028945_11 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008512 237.0
CMS3_k127_2028945_12 Cupin 2, conserved barrel domain protein K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000009257 204.0
CMS3_k127_2028945_13 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000003222 190.0
CMS3_k127_2028945_14 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000003145 192.0
CMS3_k127_2028945_15 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000001944 186.0
CMS3_k127_2028945_16 Acetyltransferase (GNAT) family K06718 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019491,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0042399,GO:0043170,GO:0043412,GO:0043436,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.1.178 0.000000000000000000000000000000000000000000000001239 179.0
CMS3_k127_2028945_17 COG1846 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000001129 173.0
CMS3_k127_2028945_18 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.000000000000000000000000000000000000000000001652 167.0
CMS3_k127_2028945_19 Predicted integral membrane protein (DUF2189) - - - 0.0000000000000000000000000000000000000004282 160.0
CMS3_k127_2028945_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.041e-207 652.0
CMS3_k127_2028945_20 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000000000000000008517 147.0
CMS3_k127_2028945_21 YfaZ precursor - - - 0.00000000000000000141 93.0
CMS3_k127_2028945_22 Protein of unknown function (DUF3012) - - - 0.000000000000003698 77.0
CMS3_k127_2028945_23 Peptidase S15 K06978 - - 0.00000000003396 69.0
CMS3_k127_2028945_24 SH3 domain protein K07184 - - 0.0000000008219 68.0
CMS3_k127_2028945_3 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 475.0
CMS3_k127_2028945_4 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 474.0
CMS3_k127_2028945_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 404.0
CMS3_k127_2028945_6 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007458 305.0
CMS3_k127_2028945_7 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 301.0
CMS3_k127_2028945_8 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 295.0
CMS3_k127_2028945_9 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 273.0
CMS3_k127_2044817_0 Transposase DDE domain - - - 0.00003638 56.0
CMS3_k127_2047999_0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 311.0
CMS3_k127_2047999_1 PilZ domain - - - 0.000000000000000000000000000214 120.0
CMS3_k127_2056829_0 - - - - 0.00000000000000000000000001802 115.0
CMS3_k127_2056829_1 - - - - 0.0000002904 60.0
CMS3_k127_2056829_2 COG4677 Pectin methylesterase K01051 - 3.1.1.11 0.0001408 50.0
CMS3_k127_2075057_0 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 299.0
CMS3_k127_2075057_1 PFAM alpha beta hydrolase fold K01055,K14727 - 3.1.1.24,4.1.1.44 0.0000000000000000000000000000000000000000018 165.0
CMS3_k127_2075057_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000008389 123.0
CMS3_k127_2108056_0 Na+/H+ ion antiporter subunit K05569 - - 0.000000000000000000000000000000000000000000000619 172.0
CMS3_k127_2108056_1 Na+/H+ antiporter subunit K05571 - - 0.000000000000000000000000000000002157 132.0
CMS3_k127_2108056_2 Domain of unknown function (DUF4040) - - - 0.0000000000000000000003247 103.0
CMS3_k127_2108056_3 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000000002109 96.0
CMS3_k127_2108056_4 Domain related to MnhB subunit of Na+/H+ antiporter - - - 0.0000000000007244 73.0
CMS3_k127_2109554_0 Peptidase, M16 K06972 - - 0.0 1179.0
CMS3_k127_2109554_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 2.199e-292 906.0
CMS3_k127_2109554_10 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 404.0
CMS3_k127_2109554_11 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 353.0
CMS3_k127_2109554_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 334.0
CMS3_k127_2109554_13 Domain of unknown function (DUF4350) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 319.0
CMS3_k127_2109554_14 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 296.0
CMS3_k127_2109554_15 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005185 272.0
CMS3_k127_2109554_16 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000002061 258.0
CMS3_k127_2109554_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002574 242.0
CMS3_k127_2109554_18 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000001024 194.0
CMS3_k127_2109554_19 diguanylate cyclase - - - 0.0000000000000000000000000000000000000003104 168.0
CMS3_k127_2109554_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.905e-269 838.0
CMS3_k127_2109554_20 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000004153 111.0
CMS3_k127_2109554_21 Cytochrome c554 and c-prime - - - 0.00000000000000001357 90.0
CMS3_k127_2109554_22 Transcriptional regulator K21703 - - 0.00000000001561 64.0
CMS3_k127_2109554_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 7.359e-268 832.0
CMS3_k127_2109554_4 Diguanylate cyclase - - - 6.084e-200 654.0
CMS3_k127_2109554_5 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004455,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022607,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 600.0
CMS3_k127_2109554_6 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 559.0
CMS3_k127_2109554_7 ATPase, AAA K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 516.0
CMS3_k127_2109554_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 521.0
CMS3_k127_2109554_9 pfam abc K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 410.0
CMS3_k127_2150495_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1135.0
CMS3_k127_2150495_1 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 5.705e-289 910.0
CMS3_k127_2150495_10 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000001146 201.0
CMS3_k127_2150495_11 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000002837 196.0
CMS3_k127_2150495_12 nuclease K01174 - 3.1.31.1 0.000000000000000000000000000000000000000000000001388 185.0
CMS3_k127_2150495_13 - - - - 0.000000000000000000000000000000000000000000000008766 181.0
CMS3_k127_2150495_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000001093 143.0
CMS3_k127_2150495_15 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000007938 124.0
CMS3_k127_2150495_16 ABC transporter substrate binding protein - - - 0.00000000000000000001417 102.0
CMS3_k127_2150495_17 - - - - 0.00000004911 59.0
CMS3_k127_2150495_19 Protein of unknown function (DUF3135) - - - 0.0001155 49.0
CMS3_k127_2150495_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.426e-232 724.0
CMS3_k127_2150495_3 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 576.0
CMS3_k127_2150495_4 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 488.0
CMS3_k127_2150495_5 histidine kinase HAMP region domain protein K07678 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000728 389.0
CMS3_k127_2150495_6 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 349.0
CMS3_k127_2150495_7 TIGRFAM 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 323.0
CMS3_k127_2150495_8 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 301.0
CMS3_k127_2150495_9 PFAM NUDIX hydrolase K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002921 257.0
CMS3_k127_2153207_0 Dinitrogenase iron-molybdenum cofactor K02585 - - 1.775e-242 760.0
CMS3_k127_2153207_1 Fis Family K02584 - - 3.098e-214 676.0
CMS3_k127_2153207_10 peptidase K06992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007601 258.0
CMS3_k127_2153207_11 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
CMS3_k127_2153207_12 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000004192 237.0
CMS3_k127_2153207_13 - - - - 0.0000000000000000000000000000000000000000000000133 185.0
CMS3_k127_2153207_14 PFAM NifQ K15790 - - 0.00000000000000000000000000000000000000000000001414 179.0
CMS3_k127_2153207_15 - - - - 0.000000000000000000000000000000000000000001754 170.0
CMS3_k127_2153207_16 Belongs to the ArsC family - - - 0.000000000000000000000000000000000000002144 151.0
CMS3_k127_2153207_17 Ferredoxin - - - 0.000000000000000000000000000000000005137 138.0
CMS3_k127_2153207_18 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000007661 115.0
CMS3_k127_2153207_19 Protein of unknown function (DUF502) - - - 0.0000000000000005767 78.0
CMS3_k127_2153207_2 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 568.0
CMS3_k127_2153207_20 PFAM peptidase M4 thermolysin - - - 0.00000000000007793 83.0
CMS3_k127_2153207_21 - - - - 0.0000000001926 70.0
CMS3_k127_2153207_22 - - - - 0.000000004097 66.0
CMS3_k127_2153207_23 - - - - 0.0001428 53.0
CMS3_k127_2153207_3 nitrogen fixation negative regulator NifL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 483.0
CMS3_k127_2153207_4 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 472.0
CMS3_k127_2153207_5 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 448.0
CMS3_k127_2153207_6 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 366.0
CMS3_k127_2153207_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 342.0
CMS3_k127_2153207_8 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 307.0
CMS3_k127_2153207_9 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 310.0
CMS3_k127_2156767_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 6.507e-211 664.0
CMS3_k127_2156767_1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 442.0
CMS3_k127_2156767_2 ABC transporter ATP-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 376.0
CMS3_k127_2156767_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001831 281.0
CMS3_k127_2156767_4 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004439 248.0
CMS3_k127_2156767_5 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000001875 224.0
CMS3_k127_2156767_6 transport system, auxiliary component K18480 - - 0.0000000000000000000000000000000000000000000000000000000681 201.0
CMS3_k127_2156767_7 Cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000000000000001098 198.0
CMS3_k127_2156767_8 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000004665 109.0
CMS3_k127_2163227_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000003789 183.0
CMS3_k127_2212674_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1826.0
CMS3_k127_2212674_1 alpha amylase catalytic K05343 - 3.2.1.1,5.4.99.16 0.0 1609.0
CMS3_k127_2212674_2 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1073.0
CMS3_k127_2212674_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5e-324 1000.0
CMS3_k127_2212674_4 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 2.029e-309 961.0
CMS3_k127_2212674_5 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.237e-250 790.0
CMS3_k127_2212674_6 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 587.0
CMS3_k127_2212674_7 Alkaline and neutral invertase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 460.0
CMS3_k127_2215626_0 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000000000000000000000000000000000000000000000000000000009049 217.0
CMS3_k127_2215626_1 Transposase DDE domain - - - 0.0000000000000000000000000000000000000003216 157.0
CMS3_k127_2218777_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.338e-316 981.0
CMS3_k127_2218777_1 Belongs to the glycosyl hydrolase 57 family - - - 5.788e-223 705.0
CMS3_k127_2218777_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 2.949e-206 649.0
CMS3_k127_2218777_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 322.0
CMS3_k127_2226527_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 6.063e-233 732.0
CMS3_k127_2226527_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.209e-211 675.0
CMS3_k127_2226527_10 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 331.0
CMS3_k127_2226527_11 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 304.0
CMS3_k127_2226527_12 May be involved in recombination K03554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001746 281.0
CMS3_k127_2226527_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000006832 230.0
CMS3_k127_2226527_14 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000004083 223.0
CMS3_k127_2226527_15 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000004773 199.0
CMS3_k127_2226527_16 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000004144 198.0
CMS3_k127_2226527_17 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000002137 194.0
CMS3_k127_2226527_18 protein conserved in bacteria K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000001262 179.0
CMS3_k127_2226527_19 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000007693 171.0
CMS3_k127_2226527_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 594.0
CMS3_k127_2226527_20 Sterol-binding domain protein K03690 - - 0.000000000000000000000000000000000000000000000161 175.0
CMS3_k127_2226527_21 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000001666 175.0
CMS3_k127_2226527_22 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000005666 158.0
CMS3_k127_2226527_23 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000005855 162.0
CMS3_k127_2226527_24 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000003095 138.0
CMS3_k127_2226527_25 membrane protein domain - - - 0.00000000000000000000000000000001791 132.0
CMS3_k127_2226527_27 protein conserved in bacteria K01790 GO:0008150,GO:0009987,GO:0042710,GO:0044010,GO:0044764,GO:0051704 5.1.3.13 0.0000000000000000000000004645 109.0
CMS3_k127_2226527_28 regulation of response to stimulus K02014,K13730 - - 0.000000000000002463 90.0
CMS3_k127_2226527_3 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 550.0
CMS3_k127_2226527_30 - - - - 0.0000000479 60.0
CMS3_k127_2226527_31 Right handed beta helix region - - - 0.0000004077 63.0
CMS3_k127_2226527_32 cellulase activity K01209 - 3.2.1.55 0.0000004077 63.0
CMS3_k127_2226527_33 COG NOG27188 non supervised orthologous group - - - 0.000008595 55.0
CMS3_k127_2226527_4 malate quinone oxidoreductase K00116 - 1.1.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 535.0
CMS3_k127_2226527_5 PFAM Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 521.0
CMS3_k127_2226527_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 460.0
CMS3_k127_2226527_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 410.0
CMS3_k127_2226527_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 372.0
CMS3_k127_2226527_9 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 346.0
CMS3_k127_2242707_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000001679 243.0
CMS3_k127_2242707_1 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000101 65.0
CMS3_k127_2242707_2 DDE superfamily endonuclease - - - 0.0000000003617 63.0
CMS3_k127_2254356_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 3.547e-274 864.0
CMS3_k127_2254356_1 Phosphate transport system permease protein K02038 - - 2.384e-248 777.0
CMS3_k127_2254356_2 COG4992 Ornithine acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 543.0
CMS3_k127_2254356_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 473.0
CMS3_k127_2254356_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 451.0
CMS3_k127_2254356_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 335.0
CMS3_k127_2254356_6 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 320.0
CMS3_k127_2254356_7 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 288.0
CMS3_k127_2254356_8 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000007431 169.0
CMS3_k127_2254356_9 - - - - 0.00000000000000000000000000000000000000008785 153.0
CMS3_k127_2265416_0 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 514.0
CMS3_k127_2265416_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000004574 61.0
CMS3_k127_2268460_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1105.0
CMS3_k127_2268460_1 Sodium:solute symporter family K14393 - - 2.193e-305 944.0
CMS3_k127_2268460_10 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.588e-195 620.0
CMS3_k127_2268460_11 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 587.0
CMS3_k127_2268460_12 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046429,GO:0046490,GO:0046872,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 576.0
CMS3_k127_2268460_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 485.0
CMS3_k127_2268460_14 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 475.0
CMS3_k127_2268460_15 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0000726,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008833,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 450.0
CMS3_k127_2268460_16 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 421.0
CMS3_k127_2268460_17 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 376.0
CMS3_k127_2268460_18 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 374.0
CMS3_k127_2268460_19 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 340.0
CMS3_k127_2268460_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.192e-289 895.0
CMS3_k127_2268460_20 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 316.0
CMS3_k127_2268460_21 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 319.0
CMS3_k127_2268460_22 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 299.0
CMS3_k127_2268460_23 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 GO:0002097,GO:0002098,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 289.0
CMS3_k127_2268460_24 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001252 275.0
CMS3_k127_2268460_25 Peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001019 272.0
CMS3_k127_2268460_26 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005729 258.0
CMS3_k127_2268460_27 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000003035 249.0
CMS3_k127_2268460_28 PFAM peptidylprolyl isomerase FKBP-type K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000306 249.0
CMS3_k127_2268460_29 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000001369 228.0
CMS3_k127_2268460_3 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 1.141e-281 877.0
CMS3_k127_2268460_30 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000002964 227.0
CMS3_k127_2268460_31 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.00000000000000000000000000000000000000000000000000000000000007202 216.0
CMS3_k127_2268460_32 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000000000003546 206.0
CMS3_k127_2268460_33 TIGRFAM iron-sulfur cluster assembly protein IscA K13628 - - 0.000000000000000000000000000000000000000000000000008557 184.0
CMS3_k127_2268460_34 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.00000000000000000000000000000000000000000001197 168.0
CMS3_k127_2268460_35 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000008076 165.0
CMS3_k127_2268460_36 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000292 168.0
CMS3_k127_2268460_37 protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.000000000000000000000000000000000000002029 154.0
CMS3_k127_2268460_38 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000000000001184 142.0
CMS3_k127_2268460_39 Rhodanese domain protein - - - 0.00000000000000000000000000000002829 128.0
CMS3_k127_2268460_4 Glycosyltransferase 36 associated - - - 2.314e-256 804.0
CMS3_k127_2268460_40 Iron-sulphur cluster assembly - - - 0.0000000000000000000000000001218 116.0
CMS3_k127_2268460_41 Domain of unknown function (DUF4115) K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.000000000000000000000000008031 122.0
CMS3_k127_2268460_42 Sulfurtransferase - - - 0.00000000000000000000000729 102.0
CMS3_k127_2268460_43 Protein of unknown function (DUF2905) - - - 0.00000000000000000001214 92.0
CMS3_k127_2268460_46 - - - - 0.00000126 54.0
CMS3_k127_2268460_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.088e-243 761.0
CMS3_k127_2268460_6 Putative nucleotidyltransferase substrate binding domain K07182 - - 2.114e-239 756.0
CMS3_k127_2268460_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 2.332e-208 653.0
CMS3_k127_2268460_8 Diguanylate cyclase - - - 4.021e-203 670.0
CMS3_k127_2268460_9 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 2.579e-196 630.0
CMS3_k127_228170_0 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 391.0
CMS3_k127_228170_1 hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 323.0
CMS3_k127_228170_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000891 211.0
CMS3_k127_228170_4 - - - - 0.0000000000000464 78.0
CMS3_k127_228170_6 Alanine-zipper, major outer membrane lipoprotein - - - 0.000000007817 60.0
CMS3_k127_231454_0 - - - - 0.000000000000000000000000000000000000000000000000000002474 201.0
CMS3_k127_231454_1 - - - - 0.000000000000000000000000000000000009876 152.0
CMS3_k127_231454_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000002236 110.0
CMS3_k127_235155_0 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 5.001e-232 724.0
CMS3_k127_235155_1 DNA helicase K03657 - 3.6.4.12 1.876e-211 665.0
CMS3_k127_235155_2 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006256 278.0
CMS3_k127_235155_3 PFAM globin K06886 - - 0.00000000000000000000000000000000000000000000000000007141 188.0
CMS3_k127_235155_4 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000299 180.0
CMS3_k127_235155_5 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000001671 168.0
CMS3_k127_235155_6 Uncharacterised protein family (UPF0149) - - - 0.00000000000000000000000000000004102 133.0
CMS3_k127_239214_0 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 542.0
CMS3_k127_239214_1 PFAM histone deacetylase superfamily K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 422.0
CMS3_k127_239214_10 Paraquat-inducible protein A - - - 0.00000000000000000000000005641 113.0
CMS3_k127_239214_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 412.0
CMS3_k127_239214_3 Conserved region in glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 406.0
CMS3_k127_239214_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 336.0
CMS3_k127_239214_5 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 320.0
CMS3_k127_239214_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 298.0
CMS3_k127_239214_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001557 267.0
CMS3_k127_239214_8 transcriptional regulators K03892 - - 0.00000000000000000000000000000000000000004639 154.0
CMS3_k127_239214_9 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000005773 120.0
CMS3_k127_2404033_0 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000003689 106.0
CMS3_k127_2462507_0 Serine threonine protein kinase - - - 0.0000000000000000000002508 98.0
CMS3_k127_2509488_0 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000005297 237.0
CMS3_k127_2509488_1 transport system periplasmic component K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000002299 234.0
CMS3_k127_2509488_2 Transposase domain (DUF772) K07481 - - 0.00000000000000000000000001287 124.0
CMS3_k127_2509488_4 PIN domain K18828 - - 0.0000000000000000000004893 99.0
CMS3_k127_2509488_5 Dodecin K09165 - - 0.0000000000000001864 82.0
CMS3_k127_2546202_0 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 350.0
CMS3_k127_2546202_2 - - - - 0.0009593 44.0
CMS3_k127_2556755_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000004022 222.0
CMS3_k127_2556755_1 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000004343 108.0
CMS3_k127_2556755_2 Transposase DDE domain - - - 0.000000000000006655 76.0
CMS3_k127_2556755_3 PFAM PKD domain - - - 0.000000000003205 79.0
CMS3_k127_2577158_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000347 240.0
CMS3_k127_2585062_0 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 316.0
CMS3_k127_2585062_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000002045 166.0
CMS3_k127_2585062_2 TonB-dependent receptor - - - 0.000000000000000000000000009765 117.0
CMS3_k127_2585062_3 - - - - 0.00000000000000004007 88.0
CMS3_k127_258568_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 1.107e-270 850.0
CMS3_k127_258568_1 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 4.57e-247 781.0
CMS3_k127_258568_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627,K09699 - 2.3.1.12,2.3.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 438.0
CMS3_k127_258568_11 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 428.0
CMS3_k127_258568_12 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 335.0
CMS3_k127_258568_13 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 288.0
CMS3_k127_258568_14 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000002765 254.0
CMS3_k127_258568_15 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006787 258.0
CMS3_k127_258568_16 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001138 253.0
CMS3_k127_258568_17 - - - - 0.00000000000000000000000000000000000000000000000001583 190.0
CMS3_k127_258568_18 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000001225 181.0
CMS3_k127_258568_19 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000000000008268 170.0
CMS3_k127_258568_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 583.0
CMS3_k127_258568_20 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000001885 148.0
CMS3_k127_258568_21 Cytochrome c - - - 0.000000000000000000000000002798 128.0
CMS3_k127_258568_22 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000002658 108.0
CMS3_k127_258568_23 PFAM cytochrome c - - - 0.000000000000000004637 98.0
CMS3_k127_258568_24 Predicted integral membrane protein (DUF2189) - - - 0.0000000000003016 71.0
CMS3_k127_258568_25 Pfam Transposase IS66 - - - 0.00000000000259 71.0
CMS3_k127_258568_3 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0019438,GO:0019464,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045250,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0065007,GO:0065008,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 537.0
CMS3_k127_258568_4 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 499.0
CMS3_k127_258568_5 PFAM ABC-type uncharacterised transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 483.0
CMS3_k127_258568_6 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 472.0
CMS3_k127_258568_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 465.0
CMS3_k127_258568_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 462.0
CMS3_k127_258568_9 Dehydrogenase E1 component K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 443.0
CMS3_k127_2591481_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0 1178.0
CMS3_k127_2591481_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 1.684e-256 795.0
CMS3_k127_2591481_10 - - - - 0.00000000000000000000000000000000000000000003427 164.0
CMS3_k127_2591481_11 nitrite reductase K00363 - 1.7.1.15 0.00000000000000000000000000000000000000004475 154.0
CMS3_k127_2591481_12 Domain of unknown function (DUF4177) - - - 0.0000000000000000000000000000000002141 133.0
CMS3_k127_2591481_13 ADP-ribosylglycohydrolase - - - 0.000000001756 60.0
CMS3_k127_2591481_14 Domain of unknown function (DUF1768) K09935 - - 0.00000001436 58.0
CMS3_k127_2591481_15 - K09712 - - 0.000001076 56.0
CMS3_k127_2591481_16 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.000002679 51.0
CMS3_k127_2591481_17 Uncharacterized protein conserved in bacteria (DUF2135) - - - 0.00002618 48.0
CMS3_k127_2591481_2 NMT1-like family K15576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 607.0
CMS3_k127_2591481_3 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 452.0
CMS3_k127_2591481_4 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 435.0
CMS3_k127_2591481_5 TIGRFAM Nitrate transport ATP-binding K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 430.0
CMS3_k127_2591481_6 small subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 392.0
CMS3_k127_2591481_8 Group 1 truncated hemoglobin K06886 - - 0.00000000000000000000000000000000000000000000002634 173.0
CMS3_k127_2591481_9 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000152 174.0
CMS3_k127_259850_0 PFAM Glycosyl transferase family 2 - - - 2.015e-262 827.0
CMS3_k127_259850_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 7.973e-246 772.0
CMS3_k127_259850_10 pfam abc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005273 254.0
CMS3_k127_259850_11 small GTP-binding protein K06945 - - 0.00000000000000000000000000000000000000000000000000000000000000005739 227.0
CMS3_k127_259850_12 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.00000000000000000000000000000000000000000000000000000000004211 205.0
CMS3_k127_259850_13 transcription factor binding - - - 0.00000000000000000000000000000000000000000000000000000003106 199.0
CMS3_k127_259850_14 COG2346, Truncated hemoglobins K06886,K07006 - - 0.00000000000000000000000000000000000000000000000000006072 197.0
CMS3_k127_259850_15 - - - - 0.000000000000000000000000000000000000000000000000004321 186.0
CMS3_k127_259850_16 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000001648 179.0
CMS3_k127_259850_17 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000798 170.0
CMS3_k127_259850_18 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000007238 131.0
CMS3_k127_259850_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000001018 136.0
CMS3_k127_259850_2 Ammonium transporter K03320 - - 1.086e-208 655.0
CMS3_k127_259850_20 Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000004787 118.0
CMS3_k127_259850_21 AntiSigma factor - - - 0.00000000000000000001225 100.0
CMS3_k127_259850_22 Membrane fusogenic activity K09806 - - 0.00000000000000000005438 91.0
CMS3_k127_259850_23 - - - - 0.00000000007463 72.0
CMS3_k127_259850_24 Cellulose synthase operon protein C C-terminus (BCSC_C) - - - 0.000000001002 72.0
CMS3_k127_259850_25 PFAM GCN5-related N-acetyltransferase K03824 - - 0.00000009584 54.0
CMS3_k127_259850_27 Acetyltransferase (GNAT) domain - - - 0.0000001544 53.0
CMS3_k127_259850_3 PFAM Magnesium chelatase, ChlI subunit K07391 - - 1.405e-207 657.0
CMS3_k127_259850_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 413.0
CMS3_k127_259850_5 Bacterial cellulose synthase subunit K20541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 429.0
CMS3_k127_259850_6 PFAM conserved K02069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 398.0
CMS3_k127_259850_7 Protein-tyrosine phosphatase K14165 - 3.1.3.16,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 343.0
CMS3_k127_259850_8 Glycosyl hydrolases family 8 K20542 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 306.0
CMS3_k127_259850_9 cellulose synthase operon protein YhjU - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009605 289.0
CMS3_k127_26067_0 Phage tail sheath C-terminal domain K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 467.0
CMS3_k127_26067_1 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000009765 181.0
CMS3_k127_26067_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000003545 160.0
CMS3_k127_2648315_0 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 529.0
CMS3_k127_269601_0 Heat shock 70 kDa protein K04043 - - 0.0 1052.0
CMS3_k127_269601_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 578.0
CMS3_k127_269601_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000001261 104.0
CMS3_k127_269601_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 563.0
CMS3_k127_269601_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 408.0
CMS3_k127_269601_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 398.0
CMS3_k127_269601_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 317.0
CMS3_k127_269601_6 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000002433 211.0
CMS3_k127_269601_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000001614 185.0
CMS3_k127_269601_8 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000001142 145.0
CMS3_k127_269601_9 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000005137 108.0
CMS3_k127_2705274_0 Homeodomain-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 494.0
CMS3_k127_2705274_1 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.000000000003352 66.0
CMS3_k127_2726546_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 442.0
CMS3_k127_2726546_1 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000004221 200.0
CMS3_k127_2727071_0 PFAM Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002089 249.0
CMS3_k127_2727071_1 Major Facilitator Superfamily - - - 0.00000000000005288 72.0
CMS3_k127_2727071_2 WD-40 repeat - - - 0.000008864 48.0
CMS3_k127_2727071_3 AAA domain (dynein-related subfamily) - - - 0.00006949 51.0
CMS3_k127_2740318_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 471.0
CMS3_k127_2740318_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 448.0
CMS3_k127_2740318_2 tetR family - - - 0.00000000000000000000000000000000007078 141.0
CMS3_k127_282483_0 Domain of unknown function (DUF3482) - - - 5.42e-237 743.0
CMS3_k127_282483_1 Protein of unknown function (DUF2868) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 573.0
CMS3_k127_282483_2 Vitamin k epoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 307.0
CMS3_k127_282483_3 - - - - 0.00000000000000000000000000000000000000000000000154 184.0
CMS3_k127_282483_4 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000009279 166.0
CMS3_k127_282483_5 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000002474 151.0
CMS3_k127_282483_6 Transcriptional regulator K13771 - - 0.000000000000000000000000000000000000008664 151.0
CMS3_k127_282483_7 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000001361 115.0
CMS3_k127_282483_8 hemerythrin HHE cation binding domain - - - 0.0000000000000000000001107 104.0
CMS3_k127_282483_9 photosynthesis K02656 - - 0.0000000000008714 73.0
CMS3_k127_284541_0 to Escherichia coli transposase for insertion sequence element IS21 IstA SW ISTA_ECOLI (P15025) (390 aa) fasta scores E() 3e-27, 33.1 id in 329 aa. Identical to the previously sequenced Yersinia pestis,Yersinia pseudotuberculosis and Escherichia coli pesticin plasmid insertion sequence transposase Y1055 TR P74993 (EMBL U59875) (340 aa) fasta scores E() 0, 100.0 id in 340 aa - - - 1.271e-223 704.0
CMS3_k127_284541_1 ATP-binding protein, IstB SW ISTB_ECOLI (P15026) (265 aa) fasta scores E() 0, 47.4 id in 249 aa. Also almost identical to Yersinia pestis and Escherichia coli - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 417.0
CMS3_k127_284541_2 Transposase K07483 - - 0.0000000000001445 71.0
CMS3_k127_2874793_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000001554 223.0
CMS3_k127_2874793_1 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000002516 151.0
CMS3_k127_2877328_0 branched-chain amino acid K11959 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 569.0
CMS3_k127_2877328_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 325.0
CMS3_k127_2877328_2 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000009404 121.0
CMS3_k127_2904361_0 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000002181 109.0
CMS3_k127_2904361_1 - - - - 0.0000000000000000001144 99.0
CMS3_k127_2904361_2 - - - - 0.000000001106 62.0
CMS3_k127_2908772_0 - - - - 0.000000001215 66.0
CMS3_k127_2909293_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 330.0
CMS3_k127_2909293_1 - - - - 0.00000000000002784 81.0
CMS3_k127_2910392_0 RHS protein - - - 0.000000000000000000000000000000001826 140.0
CMS3_k127_2910392_1 - - - - 0.0000000000000000001248 96.0
CMS3_k127_2910392_2 self proteolysis K01181,K02027,K17315,K17318 - 3.2.1.8 0.0000000000001911 74.0
CMS3_k127_2910392_3 Transposase - - - 0.000008338 49.0
CMS3_k127_2919792_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 566.0
CMS3_k127_2919999_0 FAD linked - - - 0.0 1902.0
CMS3_k127_2919999_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.995e-234 734.0
CMS3_k127_2919999_10 - - - - 0.000000000000000000001111 95.0
CMS3_k127_2919999_11 TIGRFAM TIGR02449 family protein K09892 - - 0.000000000003026 70.0
CMS3_k127_2919999_2 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.277e-203 642.0
CMS3_k127_2919999_3 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 359.0
CMS3_k127_2919999_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 GO:0003674,GO:0003824,GO:0004751,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042802,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 335.0
CMS3_k127_2919999_5 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000000000000000006399 216.0
CMS3_k127_2919999_6 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000001292 207.0
CMS3_k127_2919999_7 Gram-negative porin - - - 0.00000000000000000000000000000000000000002002 166.0
CMS3_k127_2919999_8 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000002607 153.0
CMS3_k127_2919999_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000001099 101.0
CMS3_k127_2929723_0 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 482.0
CMS3_k127_293287_0 Bifunctional purine biosynthesis protein PurH K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 1.897e-272 846.0
CMS3_k127_293287_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.472e-244 759.0
CMS3_k127_293287_10 MJ0042 family finger-like protein - - - 0.00000000000000000000000000000038 140.0
CMS3_k127_293287_11 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.000000000000000000000002671 104.0
CMS3_k127_293287_2 Belongs to the GARS family K01945 GO:0003674,GO:0003824,GO:0004637,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.13 3.63e-209 658.0
CMS3_k127_293287_3 Sulfatase - - - 1.689e-202 652.0
CMS3_k127_293287_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 478.0
CMS3_k127_293287_5 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 350.0
CMS3_k127_293287_6 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 338.0
CMS3_k127_293287_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000001405 213.0
CMS3_k127_293287_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000003262 199.0
CMS3_k127_293287_9 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000002064 166.0
CMS3_k127_2942210_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 430.0
CMS3_k127_2942210_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 333.0
CMS3_k127_2942210_2 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001174 291.0
CMS3_k127_2942210_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001538 261.0
CMS3_k127_2942210_4 Uncharacterized conserved protein (DUF2267) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004223 236.0
CMS3_k127_2971153_0 DNA synthesis involved in double-strand break repair via homologous recombination K07455 - - 0.00000000000000000000000000000000000000000000000002407 193.0
CMS3_k127_2977553_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 521.0
CMS3_k127_2977553_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003255 266.0
CMS3_k127_2977553_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000001204 236.0
CMS3_k127_2977553_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000006613 213.0
CMS3_k127_300717_0 Dynamin family - - - 9.321e-201 644.0
CMS3_k127_300717_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 613.0
CMS3_k127_300717_10 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 284.0
CMS3_k127_300717_11 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002862 273.0
CMS3_k127_300717_12 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000003377 229.0
CMS3_k127_300717_13 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000007667 169.0
CMS3_k127_300717_14 nuclease - - - 0.000000000000000000000000000000000000000001289 167.0
CMS3_k127_300717_15 DUF167 K09131 - - 0.0000000000000000000000000000001363 126.0
CMS3_k127_300717_16 Fe-S-cluster oxidoreductase K06940 - - 0.0000000000000000000000000000004484 123.0
CMS3_k127_300717_17 Domain of unknown function (DUF4426) - - - 0.000000000000000000000000001928 117.0
CMS3_k127_300717_18 - - - - 0.000000000000001142 80.0
CMS3_k127_300717_19 - - - - 0.0000000009469 65.0
CMS3_k127_300717_2 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 576.0
CMS3_k127_300717_3 PFAM Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 561.0
CMS3_k127_300717_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 372.0
CMS3_k127_300717_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 366.0
CMS3_k127_300717_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 334.0
CMS3_k127_300717_7 twitching motility protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 314.0
CMS3_k127_300717_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 310.0
CMS3_k127_300717_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 295.0
CMS3_k127_3028619_1 - - - - 0.00000000003281 69.0
CMS3_k127_3028800_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000002629 143.0
CMS3_k127_3028800_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000008164 133.0
CMS3_k127_3028800_3 Transposase DDE domain - - - 0.00000004826 65.0
CMS3_k127_3034245_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.669e-240 751.0
CMS3_k127_3034245_1 Belongs to the GcvP family K00282 - 1.4.4.2 2.632e-205 647.0
CMS3_k127_3034245_10 sister chromatid segregation - - - 0.0000000000000000002448 89.0
CMS3_k127_3034245_2 Biological Process cation transport (GO 0006812), Molecular Function solute hydrogen antiporter activity (GO 0015299), Cellular Component integral to membrane (GO 0016021), Biological Process transmembrane transport (GO 0055085) K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 506.0
CMS3_k127_3034245_3 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 472.0
CMS3_k127_3034245_4 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03184,K03185,K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 413.0
CMS3_k127_3034245_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 381.0
CMS3_k127_3034245_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 376.0
CMS3_k127_3034245_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000000000000001941 196.0
CMS3_k127_3034245_8 cellulase activity - - - 0.0000000000000000000000000000000000000000000000341 186.0
CMS3_k127_3034245_9 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000001575 151.0
CMS3_k127_3088619_0 PFAM Glycoside hydrolase family 65, central catalytic - - - 0.0 1037.0
CMS3_k127_3088619_1 ATP synthase alpha/beta chain, C terminal domain K02111 - 3.6.3.14 1.13e-260 809.0
CMS3_k127_3088619_10 Protein of unknown function (DUF808) K09781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 357.0
CMS3_k127_3088619_11 PFAM ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 339.0
CMS3_k127_3088619_12 Saccharopine dehydrogenase K03340 - 1.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 328.0
CMS3_k127_3088619_13 COGs COG1801 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 288.0
CMS3_k127_3088619_14 ATP synthase B/B' CF(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000007438 241.0
CMS3_k127_3088619_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000001406 233.0
CMS3_k127_3088619_16 ribosomal large subunit export from nucleus - - - 0.00000000000000000000000000000000000000000000000000000000000415 212.0
CMS3_k127_3088619_17 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000003379 207.0
CMS3_k127_3088619_18 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000009659 209.0
CMS3_k127_3088619_19 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K02114 - - 0.0000000000000000000000000000000000000000000000000000001053 198.0
CMS3_k127_3088619_2 ATP synthase alpha/beta chain, C terminal domain K02112 - 3.6.3.14 1.556e-257 798.0
CMS3_k127_3088619_20 Protein of unknown function (DUF3775) - - - 0.000000000000000000000000000000000000000000000201 171.0
CMS3_k127_3088619_21 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000000009196 153.0
CMS3_k127_3088619_22 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000000000000000000000000000005659 139.0
CMS3_k127_3088619_23 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000221 129.0
CMS3_k127_3088619_24 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000009637 130.0
CMS3_k127_3088619_25 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000000000000001829 125.0
CMS3_k127_3088619_26 RNA-DNA hybrid ribonuclease activity K03469 - 3.1.26.4 0.00000000000000000000000000004051 125.0
CMS3_k127_3088619_27 HNH endonuclease - - - 0.00000000000000000000000006425 109.0
CMS3_k127_3088619_28 Dodecin K09165 - - 0.0000000000000000000537 93.0
CMS3_k127_3088619_29 N-ATPase, AtpR subunit - - - 0.000002408 53.0
CMS3_k127_3088619_3 DNA polymerase X family K02347 - - 1.278e-243 764.0
CMS3_k127_3088619_4 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 546.0
CMS3_k127_3088619_5 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 490.0
CMS3_k127_3088619_6 PFAM Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 467.0
CMS3_k127_3088619_7 ATP synthase K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 444.0
CMS3_k127_3088619_8 Bacterial transcription activator, effector binding domain K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 420.0
CMS3_k127_3088619_9 ATP synthase A chain K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 375.0
CMS3_k127_3099935_0 Protein of unknown function (DUF3604) - - - 3.051e-314 973.0
CMS3_k127_3099935_1 Sulfatase K01130 - 3.1.6.1 1.237e-274 851.0
CMS3_k127_3099935_2 Protein of unknown function (DUF3604) - - - 2.747e-259 815.0
CMS3_k127_3099935_3 Cytochrome c554 and c-prime - - - 3.851e-208 666.0
CMS3_k127_3099935_4 Predicted Permease Membrane Region - - - 3.648e-202 644.0
CMS3_k127_3099935_5 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001058 268.0
CMS3_k127_3099935_6 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000391 128.0
CMS3_k127_3099935_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000004556 113.0
CMS3_k127_3099935_8 17 kDa outer membrane surface antigen - - - 0.00000001492 64.0
CMS3_k127_3102768_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 1.714e-291 904.0
CMS3_k127_3110804_0 Transposase DDE domain - - - 0.0000000000000000000000000000001077 140.0
CMS3_k127_3110804_1 Domain of unknown function (DUF4070) - - - 0.000000000000000000000000001979 123.0
CMS3_k127_3124476_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1168.0
CMS3_k127_3124476_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009987,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.389e-276 860.0
CMS3_k127_3124476_10 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 511.0
CMS3_k127_3124476_11 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 499.0
CMS3_k127_3124476_12 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 475.0
CMS3_k127_3124476_13 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391 410.0
CMS3_k127_3124476_14 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 394.0
CMS3_k127_3124476_15 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 351.0
CMS3_k127_3124476_16 Domain of Unknown Function (DUF350) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007171 282.0
CMS3_k127_3124476_17 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000004298 263.0
CMS3_k127_3124476_18 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002589 269.0
CMS3_k127_3124476_19 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000005748 244.0
CMS3_k127_3124476_2 signal transduction histidine kinase - - - 1.264e-230 735.0
CMS3_k127_3124476_20 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000004137 215.0
CMS3_k127_3124476_21 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000008463 207.0
CMS3_k127_3124476_22 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000000000000000000000002982 203.0
CMS3_k127_3124476_23 PFAM Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000009579 194.0
CMS3_k127_3124476_24 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000223 178.0
CMS3_k127_3124476_25 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000003594 162.0
CMS3_k127_3124476_26 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000001972 154.0
CMS3_k127_3124476_27 - - - - 0.0000000000000000000000000000000008349 136.0
CMS3_k127_3124476_3 PFAM TrkA-N domain K03499 - - 8.551e-227 709.0
CMS3_k127_3124476_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 1.808e-217 685.0
CMS3_k127_3124476_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 583.0
CMS3_k127_3124476_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 557.0
CMS3_k127_3124476_7 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 562.0
CMS3_k127_3124476_8 Belongs to the AAA ATPase family K13525 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 544.0
CMS3_k127_3124476_9 Exonuclease C-terminal K01141 - 3.1.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 533.0
CMS3_k127_3130490_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.374e-215 677.0
CMS3_k127_3130490_1 Radical SAM superfamily K04069 - 1.97.1.4 3.823e-208 652.0
CMS3_k127_3130490_10 - - - - 0.000000000000000001162 90.0
CMS3_k127_3130490_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 1.061e-197 619.0
CMS3_k127_3130490_3 Nucleoside H+ symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 449.0
CMS3_k127_3130490_4 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 383.0
CMS3_k127_3130490_5 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 338.0
CMS3_k127_3130490_6 May be involved in the biosynthesis of molybdopterin K03638,K03831 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0042802,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 295.0
CMS3_k127_3130490_7 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001266 280.0
CMS3_k127_3130490_8 pfam ammecr1 - - - 0.000000000000000000000000000000000000000000000000000000000000000001429 232.0
CMS3_k127_3130490_9 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000505 134.0
CMS3_k127_314024_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000001718 117.0
CMS3_k127_3143477_0 Psort location - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 321.0
CMS3_k127_3143477_1 - - - - 0.00000000000000000000000000000000000003457 157.0
CMS3_k127_3143477_2 Diadenylate cyclase - - - 0.0000000000002089 71.0
CMS3_k127_3143477_3 Glucoamylase and related glycosyl hydrolases - - - 0.00000002794 56.0
CMS3_k127_3143477_4 - - - - 0.00001868 55.0
CMS3_k127_315_0 Multicopper oxidase - - - 2.342e-314 973.0
CMS3_k127_315_1 - - - - 1.004e-220 692.0
CMS3_k127_315_10 Protein of unknown function, DUF484 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003257 284.0
CMS3_k127_315_12 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair - - - 0.0000000000000000000000000000000000000000000000000000000000000001754 227.0
CMS3_k127_315_13 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 GO:0003674,GO:0003824,GO:0008119,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008757,GO:0010035,GO:0010038,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0046690,GO:0050896 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000001525 222.0
CMS3_k127_315_14 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000003002 220.0
CMS3_k127_315_15 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000639 196.0
CMS3_k127_315_16 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.000000000000000000000000000000000000000001591 161.0
CMS3_k127_315_18 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000002534 151.0
CMS3_k127_315_19 choline dehydrogenase activity - - - 0.0000000000000000000000000000000009077 135.0
CMS3_k127_315_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 445.0
CMS3_k127_315_21 - - - - 0.000000000000000000000000000001125 126.0
CMS3_k127_315_22 ketosteroid isomerase - - - 0.00000000000000000000000000006738 126.0
CMS3_k127_315_23 YebG protein K09918 - - 0.000000000000000000000000002801 113.0
CMS3_k127_315_24 Domain of unknown function (DUF1840) - - - 0.0000000000000000000000000965 109.0
CMS3_k127_315_25 - - - - 0.0000000000000000000000001083 113.0
CMS3_k127_315_26 Fe-S protein K06938 - - 0.00000000000000000000001596 102.0
CMS3_k127_315_28 Putative zinc- or iron-chelating domain - - - 0.000001302 55.0
CMS3_k127_315_29 transcriptional regulator PadR family protein - - - 0.0003959 49.0
CMS3_k127_315_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 451.0
CMS3_k127_315_4 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 443.0
CMS3_k127_315_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 388.0
CMS3_k127_315_6 Predicted methyltransferase regulatory domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009924 398.0
CMS3_k127_315_7 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 347.0
CMS3_k127_315_8 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 341.0
CMS3_k127_315_9 Copper resistance protein B precursor (CopB) K07233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008261 282.0
CMS3_k127_3172048_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1080.0
CMS3_k127_3172048_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 530.0
CMS3_k127_3172048_10 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 321.0
CMS3_k127_3172048_11 TIGRFAM channel protein, hemolysin III family K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004111 249.0
CMS3_k127_3172048_12 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000003484 234.0
CMS3_k127_3172048_13 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000001701 232.0
CMS3_k127_3172048_15 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000007078 205.0
CMS3_k127_3172048_16 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000000000000000000000002103 201.0
CMS3_k127_3172048_17 Pilin (bacterial filament) K02650 - - 0.00000000000000000000000000000000000000000000000000479 185.0
CMS3_k127_3172048_18 TIGRFAM CRISPR-associated protein - - - 0.000000000000000000000000000000000000000000000001846 181.0
CMS3_k127_3172048_19 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000503 157.0
CMS3_k127_3172048_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03212 - 2.1.1.189 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 482.0
CMS3_k127_3172048_20 - - - - 0.000000000000000000000000000000005817 131.0
CMS3_k127_3172048_21 Ami_2 - - - 0.00000000000000000000000000002413 124.0
CMS3_k127_3172048_22 - - - - 0.00000000000000000000000001993 109.0
CMS3_k127_3172048_23 Yip1 domain - - - 0.000000000000004506 84.0
CMS3_k127_3172048_24 Fumarylacetoacetate (FAA) hydrolase family K01617 - 4.1.1.77 0.0000000000004435 79.0
CMS3_k127_3172048_25 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000000000009634 75.0
CMS3_k127_3172048_26 - - - - 0.0000000003022 63.0
CMS3_k127_3172048_27 Protein of unknown function (DUF3096) - - - 0.0000003243 53.0
CMS3_k127_3172048_28 COG1459 Type II secretory pathway, component PulF K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 - 0.000005905 58.0
CMS3_k127_3172048_3 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 479.0
CMS3_k127_3172048_4 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 450.0
CMS3_k127_3172048_5 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 443.0
CMS3_k127_3172048_6 radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 442.0
CMS3_k127_3172048_7 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 437.0
CMS3_k127_3172048_8 Predicted nucleotidyltransferase K07074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 343.0
CMS3_k127_3172048_9 TIGRFAM HAD-superfamily subfamily IIA hydrolase like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 331.0
CMS3_k127_3173565_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.738e-284 888.0
CMS3_k127_3173565_1 ABC transporter transmembrane region K06147 - - 6.692e-249 782.0
CMS3_k127_3173565_10 Coenzyme F420-reducing hydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 389.0
CMS3_k127_3173565_11 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
CMS3_k127_3173565_12 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 316.0
CMS3_k127_3173565_13 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 332.0
CMS3_k127_3173565_14 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003676 278.0
CMS3_k127_3173565_15 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003279 229.0
CMS3_k127_3173565_16 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000000000000000000000000000000000000001036 228.0
CMS3_k127_3173565_17 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000003707 223.0
CMS3_k127_3173565_18 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000161 197.0
CMS3_k127_3173565_19 - - - - 0.00000000000000000000000000000000000000000000000000002191 190.0
CMS3_k127_3173565_2 Thymidine phosphorylase K00758 - 2.4.2.4 6.147e-237 741.0
CMS3_k127_3173565_20 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000003331 185.0
CMS3_k127_3173565_21 transcriptional regulator K01420 - - 0.0000000000000000000000000000000000000000006035 168.0
CMS3_k127_3173565_22 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000008597 156.0
CMS3_k127_3173565_23 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009898,GO:0010467,GO:0016020,GO:0016151,GO:0019538,GO:0019897,GO:0019898,GO:0031234,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:1901564 - 0.0000000000000000000000000000000000000009081 152.0
CMS3_k127_3173565_24 Belongs to the thioredoxin family K05838 - - 0.0000000000000000000000000000000000008361 142.0
CMS3_k127_3173565_25 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000001447 143.0
CMS3_k127_3173565_26 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.0000000000000000000001569 98.0
CMS3_k127_3173565_27 HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.0000000000000000007753 93.0
CMS3_k127_3173565_28 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000002056 89.0
CMS3_k127_3173565_29 Regulatory protein, FmdB family - - - 0.00000000000000004404 83.0
CMS3_k127_3173565_3 Ion channel K10716 - - 1.583e-209 665.0
CMS3_k127_3173565_30 Hydrogenase maturation protease - - - 0.00000000000003707 78.0
CMS3_k127_3173565_31 Cysteine-rich CPXCG - - - 0.00000000000008267 75.0
CMS3_k127_3173565_32 - - - - 0.00000007001 59.0
CMS3_k127_3173565_4 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 612.0
CMS3_k127_3173565_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 601.0
CMS3_k127_3173565_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 502.0
CMS3_k127_3173565_7 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000903 442.0
CMS3_k127_3173565_8 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 401.0
CMS3_k127_3173565_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 403.0
CMS3_k127_3192239_0 GAF domain - - - 7.045e-228 715.0
CMS3_k127_3193103_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 8.269e-246 771.0
CMS3_k127_3198548_0 TonB-dependent copper receptor K02014 - - 2.393e-194 623.0
CMS3_k127_3198548_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 336.0
CMS3_k127_3198548_2 uracil-DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 300.0
CMS3_k127_3200240_0 transposition - - - 0.00000000000000001425 89.0
CMS3_k127_3203421_0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 348.0
CMS3_k127_3203421_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003209 291.0
CMS3_k127_3223738_0 photosystem II stabilization - - - 0.0 1177.0
CMS3_k127_3223738_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000002271 248.0
CMS3_k127_3223738_2 PFAM PHA accumulation regulator DNA-binding protein - - - 0.0000000000000000000000000000000006538 138.0
CMS3_k127_3223738_3 Poly(hydroxyalcanoate) granule associated protein - - - 0.00005115 51.0
CMS3_k127_3237655_0 glycosyl transferase family 8 - - - 0.00000000000000000000000000000002388 136.0
CMS3_k127_3237655_1 PFAM von Willebrand factor type A - - - 0.0000000000000000000000002418 111.0
CMS3_k127_3237655_2 spore germination - - - 0.00000000001468 72.0
CMS3_k127_3257080_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 356.0
CMS3_k127_3257080_1 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000002834 237.0
CMS3_k127_3257080_2 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000000000000000000001892 201.0
CMS3_k127_3257080_3 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000004129 128.0
CMS3_k127_3257080_4 DNA-binding transcription factor activity - - - 0.00000000000000000000000000002373 121.0
CMS3_k127_3299292_0 Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000001152 198.0
CMS3_k127_3299292_1 Transposase DDE domain - - - 0.0000000000000000000000000212 108.0
CMS3_k127_3304616_0 transposition K07497 - - 0.00000000000000000000004491 106.0
CMS3_k127_3304616_1 COG2801 Transposase and inactivated derivatives - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00004585 53.0
CMS3_k127_3317733_0 Multicopper oxidase K22350 - 1.16.3.3 1.423e-227 729.0
CMS3_k127_3317733_1 Binding-protein-dependent transport system inner membrane component K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 448.0
CMS3_k127_3317733_2 (ABC) transporter K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 430.0
CMS3_k127_3317733_3 cation transport ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 349.0
CMS3_k127_3317733_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 309.0
CMS3_k127_3317733_5 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000007665 256.0
CMS3_k127_3317733_6 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000005487 204.0
CMS3_k127_3317733_7 thiamine-containing compound biosynthetic process K15576,K15598 - - 0.00000000000000000000000000000133 121.0
CMS3_k127_3317733_8 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.000000000000000000000002507 110.0
CMS3_k127_3317733_9 COG1943 Transposase and inactivated derivatives - - - 0.000132 48.0
CMS3_k127_332763_1 - - - - 0.0000000000000000000000000000001465 124.0
CMS3_k127_332763_2 - - - - 0.000000000000000000004535 93.0
CMS3_k127_332763_3 - - - - 0.00000000000006973 72.0
CMS3_k127_332763_4 - - - - 0.0000000000002927 70.0
CMS3_k127_332763_5 - - - - 0.00000003113 55.0
CMS3_k127_332763_7 - - - - 0.00005458 49.0
CMS3_k127_332763_8 - - - - 0.0005016 42.0
CMS3_k127_335187_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 457.0
CMS3_k127_335187_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 335.0
CMS3_k127_3424186_0 Integrase - - - 0.000000000000000000000000000008087 123.0
CMS3_k127_3424186_1 Parallel beta-helix - - - 0.0003546 51.0
CMS3_k127_344408_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 520.0
CMS3_k127_351470_0 L COG2801 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 443.0
CMS3_k127_351470_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000003106 199.0
CMS3_k127_351470_2 COG2963, Transposase and inactivated derivatives K07483 - - 0.0000000000000000000000000000000000000000000000359 172.0
CMS3_k127_3520584_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 352.0
CMS3_k127_3539341_0 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000007404 205.0
CMS3_k127_3539341_2 Tripartite tricarboxylate transporter family receptor - - - 0.00003106 49.0
CMS3_k127_3555912_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 479.0
CMS3_k127_3555912_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000417 245.0
CMS3_k127_3579146_0 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 7.91e-215 677.0
CMS3_k127_3579146_1 IstB-like ATP binding protein - - - 0.00000000000000000000000000005299 119.0
CMS3_k127_3579146_2 - - - - 0.0001479 46.0
CMS3_k127_359538_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000001536 198.0
CMS3_k127_359538_1 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000003163 100.0
CMS3_k127_3609757_0 DDE superfamily endonuclease K07494 - - 0.000000000000000000000000000000000000000000000000000000000000000002103 233.0
CMS3_k127_3609757_1 sequence-specific DNA binding K07726 - - 0.000000000000000000000000000000000000000001687 157.0
CMS3_k127_3609757_2 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000000000000000000000000000000002418 151.0
CMS3_k127_3609757_3 Luciferase-like monooxygenase - - - 0.00000000000000000000000000001919 121.0
CMS3_k127_3609757_4 DDE superfamily endonuclease K07494 - - 0.000000000000000000008488 98.0
CMS3_k127_3610428_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 560.0
CMS3_k127_3610428_1 PFAM Cation K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 451.0
CMS3_k127_3610428_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 338.0
CMS3_k127_3610428_3 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 322.0
CMS3_k127_3610428_4 membrane - - - 0.0000000000000000000000006024 106.0
CMS3_k127_3610428_5 Uncharacterized ArCR, COG1888 K09732 - - 0.00000000000000000004616 96.0
CMS3_k127_3623794_0 transposition K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000003442 231.0
CMS3_k127_3623794_1 Transposase - - - 0.00000000000000000003351 94.0
CMS3_k127_3687835_0 Endoribonuclease L-PSP - - - 0.00000008054 64.0
CMS3_k127_3687835_1 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000007854 61.0
CMS3_k127_369172_0 Sigma-54 interaction domain K11914 - - 1.575e-223 710.0
CMS3_k127_369172_1 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 9.687e-209 657.0
CMS3_k127_369172_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 594.0
CMS3_k127_369172_3 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 554.0
CMS3_k127_369172_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 327.0
CMS3_k127_369172_5 AsnC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000166 208.0
CMS3_k127_369172_6 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.000000000000000000000000000000000000000000000000000000004149 204.0
CMS3_k127_369172_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 0.000000000000000000000000000000001385 136.0
CMS3_k127_369172_8 PFAM transposase IS3 IS911 family protein K07483 - - 0.000000002194 59.0
CMS3_k127_369172_9 Uncharacterized protein conserved in bacteria C-term(DUF2220) - - - 0.00000004626 58.0
CMS3_k127_36945_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1244.0
CMS3_k127_36945_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.343e-251 800.0
CMS3_k127_36945_10 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 383.0
CMS3_k127_36945_11 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 386.0
CMS3_k127_36945_12 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 374.0
CMS3_k127_36945_13 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 359.0
CMS3_k127_36945_14 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 348.0
CMS3_k127_36945_15 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 336.0
CMS3_k127_36945_16 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 332.0
CMS3_k127_36945_17 cytochrome c biogenesis protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 316.0
CMS3_k127_36945_19 Pfam Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 299.0
CMS3_k127_36945_2 inner membrane component K02011 - - 2.131e-250 782.0
CMS3_k127_36945_20 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003307 249.0
CMS3_k127_36945_21 PFAM ResB family protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004745 264.0
CMS3_k127_36945_22 SurA N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004804 245.0
CMS3_k127_36945_23 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000001642 224.0
CMS3_k127_36945_24 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000002599 244.0
CMS3_k127_36945_25 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000003124 210.0
CMS3_k127_36945_26 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000001505 220.0
CMS3_k127_36945_27 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000513 204.0
CMS3_k127_36945_28 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000001102 202.0
CMS3_k127_36945_29 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000000000000002006 183.0
CMS3_k127_36945_3 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 4.578e-209 660.0
CMS3_k127_36945_30 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000001847 181.0
CMS3_k127_36945_31 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000001806 161.0
CMS3_k127_36945_32 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000007769 151.0
CMS3_k127_36945_33 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000002691 152.0
CMS3_k127_36945_34 - - - - 0.0000000000000000000000000000000003445 146.0
CMS3_k127_36945_35 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000005272 123.0
CMS3_k127_36945_36 Thioredoxin-like - - - 0.00000000000000000000000001275 116.0
CMS3_k127_36945_37 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000003581 109.0
CMS3_k127_36945_38 Protein of unknown function (DUF2782) - - - 0.000000000000000000001563 99.0
CMS3_k127_36945_39 - K09858 - - 0.000000000000000000001633 98.0
CMS3_k127_36945_4 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 524.0
CMS3_k127_36945_40 amine dehydrogenase activity - - - 0.0000000000000002538 90.0
CMS3_k127_36945_41 - - - - 0.00000000000000034 93.0
CMS3_k127_36945_42 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000003052 73.0
CMS3_k127_36945_43 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000006641 68.0
CMS3_k127_36945_44 Transposase IS200 like K07491 - - 0.00000005049 54.0
CMS3_k127_36945_46 DsrE/DsrF-like family - - - 0.000001071 58.0
CMS3_k127_36945_47 Protein of unknown function (DUF3501) - - - 0.000009878 53.0
CMS3_k127_36945_5 PFAM Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 493.0
CMS3_k127_36945_6 PFAM Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 480.0
CMS3_k127_36945_7 Ferric iron ABC transporter, ATP-binding protein K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 465.0
CMS3_k127_36945_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 422.0
CMS3_k127_36945_9 Transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 393.0
CMS3_k127_37227_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1458.0
CMS3_k127_37227_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1179.0
CMS3_k127_37227_10 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 444.0
CMS3_k127_37227_11 Na Pi-Cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 426.0
CMS3_k127_37227_12 Glycosyltransferase like family 2 K21366 - 2.4.1.122 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 394.0
CMS3_k127_37227_13 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 391.0
CMS3_k127_37227_14 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 398.0
CMS3_k127_37227_15 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 380.0
CMS3_k127_37227_16 Inner membrane protein involved in colicin E2 resistance K06143 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 379.0
CMS3_k127_37227_17 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 350.0
CMS3_k127_37227_18 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 326.0
CMS3_k127_37227_19 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 327.0
CMS3_k127_37227_2 PFAM Glycoside hydrolase 15-related - - - 0.0 1151.0
CMS3_k127_37227_20 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 289.0
CMS3_k127_37227_21 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002303 273.0
CMS3_k127_37227_23 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000239 252.0
CMS3_k127_37227_24 Sugar-transfer associated ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000003694 237.0
CMS3_k127_37227_25 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000002732 226.0
CMS3_k127_37227_26 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000001094 171.0
CMS3_k127_37227_27 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000001055 168.0
CMS3_k127_37227_28 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000002658 163.0
CMS3_k127_37227_3 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 6.801e-317 983.0
CMS3_k127_37227_30 Tetratricopeptide repeat - - - 0.000000000000000000000001985 120.0
CMS3_k127_37227_31 Paraquat-inducible protein A - - - 0.0000000000000000000001271 104.0
CMS3_k127_37227_32 - - - - 0.000000000000000000001767 95.0
CMS3_k127_37227_33 Glutaredoxin - - - 0.000000000000000000177 96.0
CMS3_k127_37227_34 - - - - 0.000000000000000001002 86.0
CMS3_k127_37227_36 PFAM Invasion gene expression up-regulator, SirB - - - 0.000000000005162 72.0
CMS3_k127_37227_38 - - - - 0.0001125 48.0
CMS3_k127_37227_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 2.649e-302 946.0
CMS3_k127_37227_5 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 591.0
CMS3_k127_37227_6 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 586.0
CMS3_k127_37227_7 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 544.0
CMS3_k127_37227_8 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009994 533.0
CMS3_k127_37227_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 477.0
CMS3_k127_3738970_0 PFAM Transposase IS66 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 347.0
CMS3_k127_37704_0 PFAM transposase IS66 K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 321.0
CMS3_k127_37704_1 PFAM IS66 Orf2 family protein K07484 - - 0.000000000000000000000000007331 117.0
CMS3_k127_3817568_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 403.0
CMS3_k127_382264_0 OmpA family - - - 0.0 2267.0
CMS3_k127_382264_1 Domain of unknown function DUF11 - - - 0.0 1088.0
CMS3_k127_382264_10 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006316 241.0
CMS3_k127_382264_11 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000004609 208.0
CMS3_k127_382264_12 MafB19-like deaminase K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000146 184.0
CMS3_k127_382264_13 protein conserved in bacteria K05527,K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000003639 168.0
CMS3_k127_382264_15 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000001663 100.0
CMS3_k127_382264_16 Transposase IS200 like K07491 - - 0.0009522 42.0
CMS3_k127_382264_2 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.243e-214 670.0
CMS3_k127_382264_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 351.0
CMS3_k127_382264_4 pfam php K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009349 347.0
CMS3_k127_382264_5 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 329.0
CMS3_k127_382264_6 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 314.0
CMS3_k127_382264_7 PFAM HhH-GPD K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009454 277.0
CMS3_k127_382264_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001133 263.0
CMS3_k127_382264_9 probably involved in intracellular septation K06190 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000009403 257.0
CMS3_k127_3862836_0 Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000006403 239.0
CMS3_k127_386538_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1049.0
CMS3_k127_386538_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.992e-275 859.0
CMS3_k127_386538_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 554.0
CMS3_k127_386538_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 494.0
CMS3_k127_386538_4 membrane-anchored protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 370.0
CMS3_k127_386538_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000001081 203.0
CMS3_k127_386538_6 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000007178 199.0
CMS3_k127_386538_7 BON domain - - - 0.0000000000000000000000000000000000000000000000001182 185.0
CMS3_k127_3879783_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02298 - 1.10.3.10 2.053e-233 728.0
CMS3_k127_3879783_1 cytochrome o ubiquinol oxidase K02299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 310.0
CMS3_k127_3879783_2 PFAM Surfeit locus 1 family protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001324 269.0
CMS3_k127_3879783_3 TIGRFAM Cytochrome o ubiquinol oxidase subunit IV K02300 - - 0.000000000000000000000000000000000000004697 153.0
CMS3_k127_3879783_4 COG2801 Transposase and inactivated derivatives K07497 - - 0.0008573 46.0
CMS3_k127_3921758_0 L COG2826 Transposase and inactivated derivatives, IS30 family K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 7.299e-195 613.0
CMS3_k127_3921758_1 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 449.0
CMS3_k127_3922971_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.038e-276 857.0
CMS3_k127_3922971_1 pfam abc - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 529.0
CMS3_k127_3922971_2 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 524.0
CMS3_k127_3922971_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581,K01586 - 4.1.1.17,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 485.0
CMS3_k127_3922971_4 PFAM regulatory protein AsnC Lrp family K03719 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000111 258.0
CMS3_k127_3922971_5 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000000000000000000000000000000002084 205.0
CMS3_k127_3922971_6 Thiamine-binding protein - - - 0.0000000000000000000000000000000000009892 141.0
CMS3_k127_3922971_7 Sterol carrier protein - - - 0.0000000000000000000000000000000004998 135.0
CMS3_k127_3922971_8 - - - - 0.000000000000000000000000000003132 128.0
CMS3_k127_3922971_9 Domain of unknown function (DUF4156) - - - 0.000000000000000005086 87.0
CMS3_k127_3927654_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.178e-244 761.0
CMS3_k127_3927654_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 1.114e-218 694.0
CMS3_k127_3927654_10 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 288.0
CMS3_k127_3927654_11 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001084 278.0
CMS3_k127_3927654_12 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000668 276.0
CMS3_k127_3927654_13 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002006 273.0
CMS3_k127_3927654_14 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000011 228.0
CMS3_k127_3927654_15 PFAM response regulator receiver K07183 - - 0.00000000000000000000000000000000000000000000000000000000000000002741 229.0
CMS3_k127_3927654_16 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000113 187.0
CMS3_k127_3927654_18 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000005613 178.0
CMS3_k127_3927654_19 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000001784 131.0
CMS3_k127_3927654_2 HD domain - - - 2.955e-197 629.0
CMS3_k127_3927654_20 Belongs to the UPF0250 family - - - 0.00000000000000000000000003875 109.0
CMS3_k127_3927654_21 Transposase IS200 like K07491 - - 0.0000001892 52.0
CMS3_k127_3927654_3 helicase superfamily c-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 574.0
CMS3_k127_3927654_4 Rod shape-determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 569.0
CMS3_k127_3927654_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 471.0
CMS3_k127_3927654_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 472.0
CMS3_k127_3927654_7 Belongs to the peptidase S11 family K07258 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 462.0
CMS3_k127_3927654_8 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 353.0
CMS3_k127_3927654_9 TIGRFAM Lytic murein transglycosylase B K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 345.0
CMS3_k127_3929291_0 Fis Family K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 608.0
CMS3_k127_3929291_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000001233 192.0
CMS3_k127_3942613_0 Transposase, Mutator family - - - 0.00003146 52.0
CMS3_k127_395637_0 DEAD DEAH box K06877 - - 0.0 1039.0
CMS3_k127_395637_1 S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 590.0
CMS3_k127_395637_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 485.0
CMS3_k127_395637_3 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001174 289.0
CMS3_k127_395637_4 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008786 269.0
CMS3_k127_395637_5 COG0471 Di- and tricarboxylate transporters - - - 0.0000000000000000000000000000001986 123.0
CMS3_k127_3968330_0 PFAM Integrase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000006781 246.0
CMS3_k127_3968330_1 Domain of unknown function (DUF4347) - - - 0.00000000000000000000000000000000000000000007513 181.0
CMS3_k127_3996396_0 e3 binding domain K00382 - 1.8.1.4 0.0 1293.0
CMS3_k127_3996396_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05559,K14086 - - 0.0 1280.0
CMS3_k127_3996396_10 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000000608 217.0
CMS3_k127_3996396_11 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000002925 190.0
CMS3_k127_3996396_12 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05560,K05567 - - 0.0000000000000000000000000000000000000000000001917 171.0
CMS3_k127_3996396_13 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05564,K05571 - - 0.000000000000000000000000000000000000008382 148.0
CMS3_k127_3996396_14 Multisubunit Na H antiporter, MnhF subunit K05563 - - 0.00000000000000000000000000000000001573 138.0
CMS3_k127_3996396_15 - - - - 0.000000000000000000000000001112 116.0
CMS3_k127_3996396_16 Protein of unknown function (DUF3301) - - - 0.000000000000000001257 90.0
CMS3_k127_3996396_17 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000001351 87.0
CMS3_k127_3996396_18 Dihaem cytochrome c - - - 0.000000000000004927 75.0
CMS3_k127_3996396_2 PFAM NADH Ubiquinone plastoquinone (complex I) K05561,K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 582.0
CMS3_k127_3996396_3 Transketolase, pyrimidine binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 556.0
CMS3_k127_3996396_4 Dehydrogenase E1 component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 499.0
CMS3_k127_3996396_5 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 492.0
CMS3_k127_3996396_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 461.0
CMS3_k127_3996396_7 Pfam:UPF0118 K03548 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 410.0
CMS3_k127_3996396_8 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 288.0
CMS3_k127_3996396_9 antiporter K05562,K05569 - - 0.0000000000000000000000000000000000000000000000000000000000005151 215.0
CMS3_k127_4007070_0 Cellobiose phosphorylase K00702,K13688,K18675 - 2.4.1.20,2.4.1.280 0.0 1270.0
CMS3_k127_4007070_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000006403 206.0
CMS3_k127_4007070_2 - - - - 0.0000000000000000000000000000000000000000004294 161.0
CMS3_k127_4007070_3 - - - - 0.00000000000000000000000000000002829 128.0
CMS3_k127_4007070_4 PFAM response regulator receiver, regulatory protein LuxR - - - 0.00000000000000001195 88.0
CMS3_k127_4015496_0 Protein of unknown function (DUF1376) - - - 0.0000000000000000000003326 106.0
CMS3_k127_4015496_1 Protein of unknown function (DUF1376) - - - 0.00000000000006905 81.0
CMS3_k127_4022291_0 Domain of unknown function (DUF932) - - - 0.000000000000000000000000000000000000000000000000002889 186.0
CMS3_k127_4022291_1 - - - - 0.0000000000002412 77.0
CMS3_k127_4030406_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 528.0
CMS3_k127_4030406_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 512.0
CMS3_k127_4030406_10 PFAM Biopolymer transport protein ExbD TolR K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000002587 158.0
CMS3_k127_4030406_11 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000002667 156.0
CMS3_k127_4030406_12 TonB C terminal K03646 - - 0.00000000000000000000000000000001224 138.0
CMS3_k127_4030406_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 365.0
CMS3_k127_4030406_3 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 340.0
CMS3_k127_4030406_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 328.0
CMS3_k127_4030406_5 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 286.0
CMS3_k127_4030406_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000002036 262.0
CMS3_k127_4030406_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000003833 216.0
CMS3_k127_4030406_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000001964 180.0
CMS3_k127_4030406_9 Thioesterase superfamily K01075,K07107 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0016790 3.1.2.23 0.00000000000000000000000000000000000000000000002524 173.0
CMS3_k127_406297_0 Parallel beta-helix repeats - - - 0.0 1572.0
CMS3_k127_406297_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1245.0
CMS3_k127_406297_10 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 5.159e-221 691.0
CMS3_k127_406297_11 ABC-type oligopeptide transport system, periplasmic component K02035,K13893 - - 3.505e-203 649.0
CMS3_k127_406297_12 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 3.324e-202 647.0
CMS3_k127_406297_13 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 6.83e-201 639.0
CMS3_k127_406297_14 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 602.0
CMS3_k127_406297_15 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008878,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0070566,GO:0071704,GO:1901576 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 561.0
CMS3_k127_406297_16 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 520.0
CMS3_k127_406297_17 binding-protein-dependent transport systems inner membrane component K13894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 514.0
CMS3_k127_406297_18 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 510.0
CMS3_k127_406297_19 General secretion pathway protein D K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 527.0
CMS3_k127_406297_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1183.0
CMS3_k127_406297_20 SMART Signal transduction response regulator, receiver region K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 507.0
CMS3_k127_406297_21 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 495.0
CMS3_k127_406297_22 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 483.0
CMS3_k127_406297_23 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 468.0
CMS3_k127_406297_24 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 466.0
CMS3_k127_406297_25 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 451.0
CMS3_k127_406297_26 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 420.0
CMS3_k127_406297_27 Type II secretory pathway component ExeA K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 429.0
CMS3_k127_406297_28 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 421.0
CMS3_k127_406297_29 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 401.0
CMS3_k127_406297_3 Tetratricopeptide repeat - - - 0.0 1141.0
CMS3_k127_406297_30 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 364.0
CMS3_k127_406297_31 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 359.0
CMS3_k127_406297_32 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 363.0
CMS3_k127_406297_33 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 344.0
CMS3_k127_406297_34 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 361.0
CMS3_k127_406297_35 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 346.0
CMS3_k127_406297_36 Type II secretion system K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 343.0
CMS3_k127_406297_37 phosphoesterase DHHA1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 332.0
CMS3_k127_406297_38 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 328.0
CMS3_k127_406297_39 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 323.0
CMS3_k127_406297_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.903e-284 886.0
CMS3_k127_406297_40 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002253 275.0
CMS3_k127_406297_41 Protein of unknown function (DUF429) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007473 276.0
CMS3_k127_406297_42 Uncharacterized conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006876 278.0
CMS3_k127_406297_43 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001021 261.0
CMS3_k127_406297_44 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001009 273.0
CMS3_k127_406297_45 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002093 255.0
CMS3_k127_406297_46 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007618 252.0
CMS3_k127_406297_47 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000127 254.0
CMS3_k127_406297_48 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000003263 229.0
CMS3_k127_406297_49 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000002263 227.0
CMS3_k127_406297_5 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 2.07e-271 856.0
CMS3_k127_406297_50 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000006791 222.0
CMS3_k127_406297_51 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000001008 205.0
CMS3_k127_406297_52 - - - - 0.00000000000000000000000000000000000000000000000000008446 191.0
CMS3_k127_406297_53 - - - - 0.0000000000000000000000000000000000000000000000000002667 189.0
CMS3_k127_406297_54 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000867 185.0
CMS3_k127_406297_55 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000003498 182.0
CMS3_k127_406297_56 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000007917 174.0
CMS3_k127_406297_57 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.000000000000000000000000000000000000000000001885 174.0
CMS3_k127_406297_58 biopolymer transport protein - - - 0.000000000000000000000000000000000000000000003364 168.0
CMS3_k127_406297_59 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000004814 168.0
CMS3_k127_406297_6 TonB dependent receptor - - - 1.479e-270 849.0
CMS3_k127_406297_60 Bacterial SH3 domain homologues K07184 - - 0.0000000000000000000000000000000000000001607 158.0
CMS3_k127_406297_61 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000001998 158.0
CMS3_k127_406297_62 PFAM General secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000002603 156.0
CMS3_k127_406297_63 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000009242 143.0
CMS3_k127_406297_64 - - - - 0.00000000000000000000000000000000000407 149.0
CMS3_k127_406297_65 AhpC/TSA family - - - 0.00000000000000000000000000000000005974 139.0
CMS3_k127_406297_66 - - - - 0.000000000000000000000000000000007184 135.0
CMS3_k127_406297_67 Tetratricopeptide repeat - - - 0.0000000000000000000000000000003538 128.0
CMS3_k127_406297_68 fimbrial assembly K02461 - - 0.0000000000000000000000000001793 128.0
CMS3_k127_406297_69 General secretion pathway protein H K02457 - - 0.00000000000000000000000001078 116.0
CMS3_k127_406297_7 Histidine kinase - - - 4.853e-264 863.0
CMS3_k127_406297_70 protein conserved in bacteria K09796 - - 0.000000000000000000000001146 109.0
CMS3_k127_406297_71 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.00000000000000000000003355 111.0
CMS3_k127_406297_72 Pfam Response regulator receiver - - - 0.00000000000000000000009953 102.0
CMS3_k127_406297_73 Pfam:N_methyl_2 K02459 - - 0.0000000000000000000001231 107.0
CMS3_k127_406297_74 - - - - 0.0000000000000000000002948 102.0
CMS3_k127_406297_75 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000002667 100.0
CMS3_k127_406297_76 Protein of unknown function (DUF3579) - - - 0.00000000000000000006552 94.0
CMS3_k127_406297_77 - - - - 0.0000000000000000003696 91.0
CMS3_k127_406297_8 receptor K02014 - - 6.15e-235 749.0
CMS3_k127_406297_80 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000001445 87.0
CMS3_k127_406297_81 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.0000000000000006539 85.0
CMS3_k127_406297_82 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000003089 70.0
CMS3_k127_406297_83 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000009924 64.0
CMS3_k127_406297_84 Type II secretion system protein B K02451 - - 0.000000002353 68.0
CMS3_k127_406297_85 COG0840 Methyl-accepting chemotaxis protein K02660 - - 0.000000003857 67.0
CMS3_k127_406297_86 - - - - 0.00001035 48.0
CMS3_k127_406297_87 Putative metal-binding motif - - - 0.0000718 56.0
CMS3_k127_406297_88 - K02463 - - 0.0009052 49.0
CMS3_k127_406297_9 Tetratricopeptide repeat - - - 3.294e-230 730.0
CMS3_k127_4090215_0 Large extracellular alpha-helical protein K06894 - - 4.82e-246 843.0
CMS3_k127_4090215_1 protein conserved in bacteria K07192 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 4.809e-211 670.0
CMS3_k127_4090215_10 Response regulator of the LytR AlgR family K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000001832 238.0
CMS3_k127_4090215_11 Cytochrome B561 K12262 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000005716 218.0
CMS3_k127_4090215_12 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000004163 217.0
CMS3_k127_4090215_13 Protein of unknown function (DUF1449) - - - 0.000000000000000000000000000000000000000000000000000002496 198.0
CMS3_k127_4090215_15 PFAM Stage II sporulation K06381 - - 0.0000000000000000000000000000000005779 144.0
CMS3_k127_4090215_16 Thioredoxin-like - - - 0.0000000000000000000000000000008935 129.0
CMS3_k127_4090215_17 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.0000000000000000000000001033 121.0
CMS3_k127_4090215_2 penicillin binding K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 601.0
CMS3_k127_4090215_21 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000007645 51.0
CMS3_k127_4090215_3 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 537.0
CMS3_k127_4090215_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 400.0
CMS3_k127_4090215_5 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 339.0
CMS3_k127_4090215_6 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 319.0
CMS3_k127_4090215_7 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 292.0
CMS3_k127_4090215_8 Transcriptional regulator, LysR K10918,K18900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001791 275.0
CMS3_k127_4090215_9 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007265 242.0
CMS3_k127_409842_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 509.0
CMS3_k127_409842_1 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009685 244.0
CMS3_k127_409842_2 Integrase K07497 - - 0.000000000000000000000000000000000000000000000000000000000008296 214.0
CMS3_k127_409842_3 Integrase core domain - - - 0.00000000000000000000000000000000000002834 147.0
CMS3_k127_409842_4 Transposase K07497 - - 0.00000000000000000000000000005019 118.0
CMS3_k127_409842_5 Integrase core domain K07497 - - 0.00000000002664 64.0
CMS3_k127_4099349_0 ferric reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 612.0
CMS3_k127_4099349_1 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 327.0
CMS3_k127_4099349_2 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000002696 128.0
CMS3_k127_4105116_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 312.0
CMS3_k127_4105116_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 296.0
CMS3_k127_4105116_2 lipid binding - - - 0.000000000612 63.0
CMS3_k127_4109602_0 Transposase IS66 family K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001212 257.0
CMS3_k127_4109602_1 Transposase IS66 family K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000002066 228.0
CMS3_k127_4142336_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.394e-257 804.0
CMS3_k127_4142336_1 ferric reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 548.0
CMS3_k127_4142336_10 TPM domain - - - 0.00000000000000000000005017 112.0
CMS3_k127_4142336_11 Peptidase propeptide and YPEB domain - - - 0.000000000000001056 81.0
CMS3_k127_4142336_12 CAAX protease self-immunity K07052 - - 0.00000000000002643 75.0
CMS3_k127_4142336_13 - - - - 0.00000000001328 65.0
CMS3_k127_4142336_14 TIGRFAM C_GCAxxG_C_C family protein - - - 0.00008661 46.0
CMS3_k127_4142336_2 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 510.0
CMS3_k127_4142336_3 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 488.0
CMS3_k127_4142336_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 398.0
CMS3_k127_4142336_5 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 368.0
CMS3_k127_4142336_6 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 364.0
CMS3_k127_4142336_7 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007472 259.0
CMS3_k127_4142336_8 SnoaL-like domain - - - 0.000000000000000000000000000000000001285 143.0
CMS3_k127_4142336_9 Propeptide PepSY amd peptidase M4 - - - 0.000000000000000000000000000001307 124.0
CMS3_k127_414559_0 COG2801 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 430.0
CMS3_k127_414559_1 Transposase - - - 0.0000000000000000000000000000000000002425 142.0
CMS3_k127_414559_2 - - - - 0.0000002969 55.0
CMS3_k127_4156422_0 Insecticide toxin TcdB middle/N-terminal region - - - 0.00000000000000000000000000000000000000000002208 186.0
CMS3_k127_4170102_0 reverse transcriptase K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 450.0
CMS3_k127_4171851_0 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000000000000000000000000000001363 156.0
CMS3_k127_4189706_0 PFAM Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 494.0
CMS3_k127_4198252_0 Parallel beta-helix repeats - - - 0.0 1357.0
CMS3_k127_4198252_1 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 494.0
CMS3_k127_4198252_10 Belongs to the UPF0235 family K09131 - - 0.000000000000003342 76.0
CMS3_k127_4198252_11 Esterase PHB depolymerase K05973 - 3.1.1.75 0.0002592 53.0
CMS3_k127_4198252_2 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 471.0
CMS3_k127_4198252_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 470.0
CMS3_k127_4198252_4 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 373.0
CMS3_k127_4198252_5 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002416 279.0
CMS3_k127_4198252_6 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000005301 263.0
CMS3_k127_4198252_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000264 249.0
CMS3_k127_4198252_8 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000006236 193.0
CMS3_k127_4198252_9 - - - - 0.0000000000000000000000000000003538 128.0
CMS3_k127_4220882_0 Cytochrome c bacterial - - - 1.173e-234 737.0
CMS3_k127_4220882_1 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 614.0
CMS3_k127_4220882_2 Cytochrome b/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 289.0
CMS3_k127_4220882_3 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000005061 232.0
CMS3_k127_4220882_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000005187 148.0
CMS3_k127_4273973_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 405.0
CMS3_k127_4273973_1 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000000000000000000000000000000000001459 214.0
CMS3_k127_4273973_2 - - - - 0.0000000003295 63.0
CMS3_k127_4286373_0 Transposase K07494 - - 0.000000000000000000000000000003048 134.0
CMS3_k127_4286373_1 NUDIX domain - - - 0.0007843 43.0
CMS3_k127_4339037_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 307.0
CMS3_k127_4339037_1 DNA N-6-adenine-methyltransferase (Dam) - - - 0.000000000001409 78.0
CMS3_k127_4339037_2 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50 Mre11 complex K03546 - - 0.000005464 59.0
CMS3_k127_4345445_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 473.0
CMS3_k127_4345445_1 PFAM regulatory protein TetR K03577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003973 248.0
CMS3_k127_4345445_2 AcrB/AcrD/AcrF family K18138 - - 0.000000000000000000000000000000000000000000000000000000000003968 211.0
CMS3_k127_4345445_3 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000002051 156.0
CMS3_k127_4345445_4 MltA specific insert domain K08304 - - 0.000000000000000000000000000000000577 145.0
CMS3_k127_43844_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 372.0
CMS3_k127_4415227_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 454.0
CMS3_k127_4415227_1 DDE_Tnp_1-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 298.0
CMS3_k127_4415227_2 required for the transposition of insertion element IS2404 - - - 0.000000000009871 72.0
CMS3_k127_4479590_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 510.0
CMS3_k127_4479590_1 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000009257 224.0
CMS3_k127_4495805_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 586.0
CMS3_k127_4519837_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 395.0
CMS3_k127_4519837_1 IS66 Orf2 like protein - - - 0.00000000000000000000000000000000000000000003719 165.0
CMS3_k127_4519837_2 Transposase - - - 0.00000000000000000766 84.0
CMS3_k127_4519837_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000002097 57.0
CMS3_k127_4519837_4 - - - - 0.0000103 53.0
CMS3_k127_4536992_0 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000377 265.0
CMS3_k127_4536992_1 abc transporter K01990 - - 0.0000000000152 66.0
CMS3_k127_4566775_0 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000002383 220.0
CMS3_k127_4566775_1 VirC1 protein K03496 - - 0.0000000000000000000000000000000000000000000000000001051 192.0
CMS3_k127_4566775_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000002819 159.0
CMS3_k127_4566775_3 Transposase - - - 0.000000000000000000000000000000000005753 154.0
CMS3_k127_4573043_0 Dystroglycan-type cadherin-like domains. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001683 285.0
CMS3_k127_4573043_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.0000000003578 69.0
CMS3_k127_46132_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000002717 162.0
CMS3_k127_46132_1 COG3245 Cytochrome c5 K02277 - 1.9.3.1 0.00000000000000000000000000000331 125.0
CMS3_k127_46132_2 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000001332 126.0
CMS3_k127_46132_3 - - - - 0.0000009868 53.0
CMS3_k127_4620113_0 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 520.0
CMS3_k127_4620113_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000002017 171.0
CMS3_k127_462253_0 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000007546 156.0
CMS3_k127_4646149_0 Transposase DDE domain - - - 0.000002512 61.0
CMS3_k127_4646149_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000006735 53.0
CMS3_k127_4647859_0 Belongs to the ompA family K03640 - - 0.00000000000000000000000003384 116.0
CMS3_k127_4654708_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 475.0
CMS3_k127_4654708_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000338 167.0
CMS3_k127_4686224_0 transposition, DNA-mediated K02529,K20971 - - 0.000000000000000000000000000000000000000000000000001116 191.0
CMS3_k127_4686224_1 helix_turn_helix, Lux Regulon - - - 0.000000000004609 66.0
CMS3_k127_4693231_0 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 300.0
CMS3_k127_4731624_0 PFAM extracellular solute-binding protein family 1 K10117,K17315 - - 8.325e-204 636.0
CMS3_k127_4753912_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 377.0
CMS3_k127_4761153_0 transposition K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004587 284.0
CMS3_k127_4761153_2 transposase activity K07497 - - 0.000000000000000000000005684 105.0
CMS3_k127_476846_0 glutamate synthase - - - 4.404e-289 894.0
CMS3_k127_476846_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 376.0
CMS3_k127_476846_2 COG0501 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 318.0
CMS3_k127_476846_3 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000003659 261.0
CMS3_k127_476846_4 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001262 257.0
CMS3_k127_476846_5 PFAM Glycosyl transferase, family 2 K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001307 264.0
CMS3_k127_476846_6 Polysaccharide deacetylase - - - 0.000004522 59.0
CMS3_k127_4781426_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000002002 243.0
CMS3_k127_4798124_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1080.0
CMS3_k127_4798124_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.123e-266 847.0
CMS3_k127_4798124_10 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 524.0
CMS3_k127_4798124_11 glutamate--cysteine ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 528.0
CMS3_k127_4798124_12 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 529.0
CMS3_k127_4798124_13 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 514.0
CMS3_k127_4798124_14 Acid phosphatase homologues K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 465.0
CMS3_k127_4798124_15 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 447.0
CMS3_k127_4798124_16 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 439.0
CMS3_k127_4798124_17 Chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 436.0
CMS3_k127_4798124_18 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 436.0
CMS3_k127_4798124_19 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 428.0
CMS3_k127_4798124_2 THUMP K07444,K12297 - 2.1.1.173,2.1.1.264 3.915e-255 805.0
CMS3_k127_4798124_20 Methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007859 419.0
CMS3_k127_4798124_21 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 417.0
CMS3_k127_4798124_22 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 413.0
CMS3_k127_4798124_23 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 416.0
CMS3_k127_4798124_24 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 409.0
CMS3_k127_4798124_25 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 375.0
CMS3_k127_4798124_26 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 372.0
CMS3_k127_4798124_27 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 352.0
CMS3_k127_4798124_28 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 338.0
CMS3_k127_4798124_29 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 336.0
CMS3_k127_4798124_3 ABC transporter K06158 - - 2.156e-253 796.0
CMS3_k127_4798124_30 COG1108 ABC-type Mn2 Zn2 transport systems permease components K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 323.0
CMS3_k127_4798124_31 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050355 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 313.0
CMS3_k127_4798124_32 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 312.0
CMS3_k127_4798124_33 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 310.0
CMS3_k127_4798124_34 Peptidase_C39 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
CMS3_k127_4798124_35 COG4531 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 300.0
CMS3_k127_4798124_36 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 286.0
CMS3_k127_4798124_37 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007048 287.0
CMS3_k127_4798124_38 Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair K03573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008272 273.0
CMS3_k127_4798124_39 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001593 276.0
CMS3_k127_4798124_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.003e-234 730.0
CMS3_k127_4798124_40 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K02074,K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000307 269.0
CMS3_k127_4798124_41 PFAM Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000927 258.0
CMS3_k127_4798124_42 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000003851 249.0
CMS3_k127_4798124_43 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004219 245.0
CMS3_k127_4798124_44 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000000238 230.0
CMS3_k127_4798124_45 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000003082 223.0
CMS3_k127_4798124_46 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000000000000000000000000006049 219.0
CMS3_k127_4798124_47 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000000000001344 213.0
CMS3_k127_4798124_48 - - - - 0.00000000000000000000000000000000000000000000000000000000007219 209.0
CMS3_k127_4798124_49 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000001276 207.0
CMS3_k127_4798124_5 PFAM Aminotransferase class-III K01845 - 5.4.3.8 1.221e-211 664.0
CMS3_k127_4798124_50 Belongs to the Fur family K09823 - - 0.000000000000000000000000000000000000000000000000000000004521 204.0
CMS3_k127_4798124_51 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000000000434 198.0
CMS3_k127_4798124_52 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000004382 201.0
CMS3_k127_4798124_53 - - - - 0.00000000000000000000000000000000000000000000000000004578 196.0
CMS3_k127_4798124_54 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000002616 190.0
CMS3_k127_4798124_55 Glutathione peroxidase - - - 0.000000000000000000000000000000000000000000000000005427 185.0
CMS3_k127_4798124_56 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000007104 180.0
CMS3_k127_4798124_57 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000004812 171.0
CMS3_k127_4798124_58 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000002869 177.0
CMS3_k127_4798124_59 PFAM SEC-C motif K09858 - - 0.0000000000000000000000000000000000000000000025 168.0
CMS3_k127_4798124_6 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 3.309e-197 620.0
CMS3_k127_4798124_60 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000002678 156.0
CMS3_k127_4798124_61 - - - - 0.00000000000000000000000000000000004244 137.0
CMS3_k127_4798124_62 of the cupin superfamily K06995 - - 0.00000000000000000000000000000000008727 136.0
CMS3_k127_4798124_63 - - - - 0.0000000000000000000000000000000819 133.0
CMS3_k127_4798124_64 - - - - 0.0000000000000000000000000000009128 126.0
CMS3_k127_4798124_65 Bacterial regulatory protein, arsR family - - - 0.000000000000000000000000000001307 124.0
CMS3_k127_4798124_66 pilin assembly protein - - - 0.000000000000000000000000000009146 121.0
CMS3_k127_4798124_67 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000001141 121.0
CMS3_k127_4798124_68 SMART Cold shock protein K03704 - - 0.00000000000000000000000009439 108.0
CMS3_k127_4798124_69 Protein of unknown function (DUF465) - - - 0.0000000000000000000000002748 109.0
CMS3_k127_4798124_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.393e-196 617.0
CMS3_k127_4798124_70 PFAM VanZ - - - 0.000000000000000000008179 99.0
CMS3_k127_4798124_71 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000005052 86.0
CMS3_k127_4798124_72 - - - - 0.000000005217 64.0
CMS3_k127_4798124_73 Belongs to the SlyX family K03745 - - 0.00000004569 57.0
CMS3_k127_4798124_74 Domain of unknown function (DUF3362) - - - 0.00001774 47.0
CMS3_k127_4798124_8 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.486e-196 621.0
CMS3_k127_4798124_9 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 613.0
CMS3_k127_4798532_0 RNA polymerase recycling family C-terminal K03580 - - 0.0 1086.0
CMS3_k127_4798532_1 - - - - 1.695e-208 655.0
CMS3_k127_4798532_10 Elongation factor P K02356 - - 0.0000000000000000000000000000000000000000000000000000000008232 215.0
CMS3_k127_4798532_11 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000001498 211.0
CMS3_k127_4798532_12 COG1186 Protein chain release factor B K15034 - - 0.0000000000000000000000000000000000000000000000000004394 187.0
CMS3_k127_4798532_13 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000106 169.0
CMS3_k127_4798532_14 - - - - 0.00000000000000000000000000000000000003266 149.0
CMS3_k127_4798532_15 protein conserved in bacteria K09954 - - 0.0000000000000000000000000001319 127.0
CMS3_k127_4798532_16 COG3209 Rhs family protein - - - 0.00000000000000000000000005118 120.0
CMS3_k127_4798532_17 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000002303 114.0
CMS3_k127_4798532_18 - - - - 0.000000000000000000000002156 107.0
CMS3_k127_4798532_2 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 8.929e-198 626.0
CMS3_k127_4798532_20 AAA domain - - - 0.00000000002866 74.0
CMS3_k127_4798532_21 FG-GAP repeat - - - 0.0000000001179 73.0
CMS3_k127_4798532_22 Lactonase, 7-bladed beta-propeller - - - 0.000000001557 69.0
CMS3_k127_4798532_23 Protein of unknown function (DUF2384) - - - 0.00000001008 62.0
CMS3_k127_4798532_3 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 476.0
CMS3_k127_4798532_4 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006662 430.0
CMS3_k127_4798532_5 Aldo keto - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 384.0
CMS3_k127_4798532_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 384.0
CMS3_k127_4798532_7 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 372.0
CMS3_k127_4798532_8 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 350.0
CMS3_k127_4798532_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003263 272.0
CMS3_k127_4802444_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1728.0
CMS3_k127_4802444_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00171,K00172,K02573,K03737,K13795,K18930 - 1.2.7.1 0.0 1157.0
CMS3_k127_4802444_10 Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008503 589.0
CMS3_k127_4802444_11 Nucleoside recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 590.0
CMS3_k127_4802444_12 deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 578.0
CMS3_k127_4802444_13 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 561.0
CMS3_k127_4802444_14 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 544.0
CMS3_k127_4802444_15 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 527.0
CMS3_k127_4802444_16 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008183 529.0
CMS3_k127_4802444_17 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 526.0
CMS3_k127_4802444_18 Anthranilate synthase component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 514.0
CMS3_k127_4802444_19 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652 502.0
CMS3_k127_4802444_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1053.0
CMS3_k127_4802444_20 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 493.0
CMS3_k127_4802444_21 COG0668 Small-conductance mechanosensitive channel K16052 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 467.0
CMS3_k127_4802444_22 AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 475.0
CMS3_k127_4802444_23 Fe-S cluster K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 459.0
CMS3_k127_4802444_24 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 457.0
CMS3_k127_4802444_25 Glycosyl transferase - GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 436.0
CMS3_k127_4802444_26 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 430.0
CMS3_k127_4802444_27 Histidine kinase K07673 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 432.0
CMS3_k127_4802444_28 L-lysine 6-monooxygenase (NADPH-requiring) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 409.0
CMS3_k127_4802444_29 catalyzes the conversion of K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 396.0
CMS3_k127_4802444_3 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 1.729e-313 972.0
CMS3_k127_4802444_30 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 361.0
CMS3_k127_4802444_31 2Fe-2S iron-sulfur cluster binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 344.0
CMS3_k127_4802444_32 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 350.0
CMS3_k127_4802444_33 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 330.0
CMS3_k127_4802444_34 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 GO:0000049,GO:0000166,GO:0002943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010181,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0032553,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 331.0
CMS3_k127_4802444_35 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 328.0
CMS3_k127_4802444_36 response regulator receiver K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 292.0
CMS3_k127_4802444_37 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 296.0
CMS3_k127_4802444_38 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 292.0
CMS3_k127_4802444_39 Part of a membrane complex involved in electron transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001617 258.0
CMS3_k127_4802444_4 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 8.628e-310 970.0
CMS3_k127_4802444_40 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.000000000000000000000000000000000000000000000000000000000000000000000000996 248.0
CMS3_k127_4802444_41 ErfK ybiS ycfS ynhG family protein K16291 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002108 253.0
CMS3_k127_4802444_42 PFAM Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001735 237.0
CMS3_k127_4802444_43 PFAM L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008305 233.0
CMS3_k127_4802444_44 phosphoribosyltransferase K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000116 233.0
CMS3_k127_4802444_45 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000005694 229.0
CMS3_k127_4802444_46 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000006391 202.0
CMS3_k127_4802444_47 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000003242 192.0
CMS3_k127_4802444_48 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000001789 178.0
CMS3_k127_4802444_49 Cupin - - - 0.0000000000000000000000000000000000000000000009207 171.0
CMS3_k127_4802444_5 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.535e-303 948.0
CMS3_k127_4802444_50 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000002363 160.0
CMS3_k127_4802444_51 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000003891 151.0
CMS3_k127_4802444_52 - - - - 0.00000000000000000000000000000002858 131.0
CMS3_k127_4802444_53 - - - - 0.00000000000000000000000000000006841 128.0
CMS3_k127_4802444_54 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000001783 117.0
CMS3_k127_4802444_55 Peptidoglycan-binding protein, CsiV - - - 0.0000000000000000000000009728 111.0
CMS3_k127_4802444_56 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000001733 89.0
CMS3_k127_4802444_58 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000001481 72.0
CMS3_k127_4802444_59 signal transduction histidine kinase K07678,K20974 - 2.7.13.3 0.000000000001177 72.0
CMS3_k127_4802444_6 of the RND superfamily K07003 - - 1.962e-260 823.0
CMS3_k127_4802444_7 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 8.633e-258 803.0
CMS3_k127_4802444_8 Part of a membrane complex involved in electron transport K03615 - - 1.34e-221 693.0
CMS3_k127_4802444_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.045e-199 628.0
CMS3_k127_4803384_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002182 274.0
CMS3_k127_4803384_1 Protein of unknown function (DUF2459) - - - 0.000000000000000000000000000000000000000000000001708 181.0
CMS3_k127_4803384_2 - - - - 0.0000000001685 66.0
CMS3_k127_4807840_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 546.0
CMS3_k127_4807840_1 Nitroreductase family K04719 - 1.13.11.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 339.0
CMS3_k127_4807840_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 306.0
CMS3_k127_4807840_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000001565 250.0
CMS3_k127_4807840_4 protein conserved in bacteria - - - 0.0000000000000000000000004827 108.0
CMS3_k127_4817224_0 AcrB/AcrD/AcrF family K18138 - - 0.0 1322.0
CMS3_k127_4817224_1 protein conserved in bacteria K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 391.0
CMS3_k127_4830463_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.982e-244 762.0
CMS3_k127_4830463_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.326e-227 708.0
CMS3_k127_4839863_0 PFAM von Willebrand factor type A - - - 0.0 1278.0
CMS3_k127_4839863_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.451e-312 957.0
CMS3_k127_4839863_2 Transcriptional regulator K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 515.0
CMS3_k127_4839863_3 PFAM AAA domain (dynein-related subfamily) K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 499.0
CMS3_k127_4839863_4 Stress responsive A/B Barrel Domain K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 370.0
CMS3_k127_4839863_5 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000000005977 220.0
CMS3_k127_4839863_6 - - - - 0.0000000000000000000000000000000000000000000004327 168.0
CMS3_k127_4839863_7 - - - - 0.0000000000000000000000000000000002968 139.0
CMS3_k127_4839863_8 acetyltransferase - - - 0.000000052 66.0
CMS3_k127_4842754_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 285.0
CMS3_k127_4845841_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1520.0
CMS3_k127_4845841_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.0 1137.0
CMS3_k127_4845841_10 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 535.0
CMS3_k127_4845841_11 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 515.0
CMS3_k127_4845841_12 PFAM EAL domain K21025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 527.0
CMS3_k127_4845841_13 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 499.0
CMS3_k127_4845841_14 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 439.0
CMS3_k127_4845841_15 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 419.0
CMS3_k127_4845841_16 lysine 2,3-aminomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 400.0
CMS3_k127_4845841_17 Peptidase family M48 K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 397.0
CMS3_k127_4845841_18 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 394.0
CMS3_k127_4845841_19 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 391.0
CMS3_k127_4845841_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1081.0
CMS3_k127_4845841_20 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 386.0
CMS3_k127_4845841_21 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 373.0
CMS3_k127_4845841_22 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 383.0
CMS3_k127_4845841_23 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0003906,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0034644,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0090304,GO:0104004,GO:0140097,GO:1901360 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 366.0
CMS3_k127_4845841_24 tRNA synthetases class II (D, K and N) K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 369.0
CMS3_k127_4845841_25 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 371.0
CMS3_k127_4845841_26 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells K17222,K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 352.0
CMS3_k127_4845841_27 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 359.0
CMS3_k127_4845841_28 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 343.0
CMS3_k127_4845841_29 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 323.0
CMS3_k127_4845841_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 0.0 1034.0
CMS3_k127_4845841_30 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009713 326.0
CMS3_k127_4845841_31 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 329.0
CMS3_k127_4845841_32 of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 318.0
CMS3_k127_4845841_33 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 310.0
CMS3_k127_4845841_34 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 303.0
CMS3_k127_4845841_35 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 300.0
CMS3_k127_4845841_36 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 297.0
CMS3_k127_4845841_37 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003409 263.0
CMS3_k127_4845841_38 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001874 260.0
CMS3_k127_4845841_39 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008718 252.0
CMS3_k127_4845841_4 Protein of unknown function, DUF255 K06888 - - 2.781e-242 766.0
CMS3_k127_4845841_40 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007795 261.0
CMS3_k127_4845841_41 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001118 239.0
CMS3_k127_4845841_42 NlpB/DapX lipoprotein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000006081 244.0
CMS3_k127_4845841_43 ACT domain K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000002137 231.0
CMS3_k127_4845841_44 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000004397 220.0
CMS3_k127_4845841_45 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000103 214.0
CMS3_k127_4845841_46 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.00000000000000000000000000000000000000000000000000000009917 199.0
CMS3_k127_4845841_47 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000001043 194.0
CMS3_k127_4845841_48 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000007818 175.0
CMS3_k127_4845841_49 Acyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000003593 169.0
CMS3_k127_4845841_5 Citrate transporter - - - 1.497e-238 752.0
CMS3_k127_4845841_50 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000000000000001746 162.0
CMS3_k127_4845841_51 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000001092 162.0
CMS3_k127_4845841_52 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000001219 159.0
CMS3_k127_4845841_53 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000004264 151.0
CMS3_k127_4845841_54 Hemerythrin HHE cation binding domain protein K07216 - - 0.0000000000000000000000000000000000001334 146.0
CMS3_k127_4845841_55 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000117 137.0
CMS3_k127_4845841_56 Acid phosphatase homologues - - - 0.000000000000000000000000000000001346 148.0
CMS3_k127_4845841_57 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000001506 136.0
CMS3_k127_4845841_58 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000007239 126.0
CMS3_k127_4845841_59 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000003424 133.0
CMS3_k127_4845841_6 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 7.913e-233 726.0
CMS3_k127_4845841_61 small protein containing a coiled-coil domain - - - 0.000000000000054 76.0
CMS3_k127_4845841_62 RibD C-terminal domain - - - 0.0000000004549 63.0
CMS3_k127_4845841_7 SMART Nucleotide binding protein, PINc K07175 - - 1.739e-226 709.0
CMS3_k127_4845841_8 Part of a membrane complex involved in electron transport K03615 - - 1.174e-210 671.0
CMS3_k127_4845841_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 626.0
CMS3_k127_4863673_0 NHL repeat - - - 0.0000000000000000000000000000000000000000009826 165.0
CMS3_k127_4863673_1 Haem-degrading - - - 0.00000001275 62.0
CMS3_k127_4863673_2 decarboxylase K01607 - 4.1.1.44 0.0007844 42.0
CMS3_k127_4869437_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1052.0
CMS3_k127_4869437_1 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 563.0
CMS3_k127_4869437_10 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000003318 160.0
CMS3_k127_4869437_11 PFAM cytochrome c, class I - - - 0.000000000000000000000000000000000000000007367 159.0
CMS3_k127_4869437_12 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000004962 162.0
CMS3_k127_4869437_13 Thioredoxin domain - - - 0.0000000000000000000000000000001301 126.0
CMS3_k127_4869437_14 MerR, DNA binding K19591 - - 0.0000000000000000000000000001387 120.0
CMS3_k127_4869437_15 MerR, DNA binding K19591 - - 0.0000000000000000000000000008126 118.0
CMS3_k127_4869437_16 - - - - 0.000000000000000000000000001307 114.0
CMS3_k127_4869437_17 Thioredoxin-like - - - 0.00000000000002869 81.0
CMS3_k127_4869437_19 - - - - 0.000003744 58.0
CMS3_k127_4869437_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 547.0
CMS3_k127_4869437_20 Domain of unknown function (DUF4369) - - - 0.000005493 53.0
CMS3_k127_4869437_21 transposition - - - 0.0001425 47.0
CMS3_k127_4869437_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 357.0
CMS3_k127_4869437_4 ABC-2 family transporter protein K01992,K13926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 344.0
CMS3_k127_4869437_5 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002458 272.0
CMS3_k127_4869437_6 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005137 266.0
CMS3_k127_4869437_7 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.000000000000000000000000000000000000000000000000000000003187 215.0
CMS3_k127_4869437_8 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.0000000000000000000000000000000000000000000000000000002872 199.0
CMS3_k127_4869437_9 PFAM cytochrome c, class I - - - 0.0000000000000000000000000000000000000000003192 166.0
CMS3_k127_4872030_0 Ferrous iron transport protein B K04759 - - 2.524e-251 792.0
CMS3_k127_4872030_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 9.092e-247 788.0
CMS3_k127_4872030_10 Pseudouridine synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002982 278.0
CMS3_k127_4872030_11 Domain of unknown function (DUF1287) K09974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002673 269.0
CMS3_k127_4872030_12 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000003485 231.0
CMS3_k127_4872030_13 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000000000000001696 222.0
CMS3_k127_4872030_14 Putative rRNA methylase - - - 0.00000000000000000000000000000000000000000000000000004625 192.0
CMS3_k127_4872030_15 Crp-like helix-turn-helix domain K21563 - - 0.0000000000000000000000000000000000000000000000000001397 194.0
CMS3_k127_4872030_16 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000002471 198.0
CMS3_k127_4872030_17 protein conserved in bacteria - - - 0.00000000000000000000000000000000000002642 148.0
CMS3_k127_4872030_18 - - - - 0.000000000000000000000000000000000000122 148.0
CMS3_k127_4872030_19 PFAM RNA recognition motif - - - 0.0000000000000000000000000000000000005185 141.0
CMS3_k127_4872030_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 580.0
CMS3_k127_4872030_20 Acetyltransferase (GNAT) domain K03830 - - 0.0000000000000000000000000000000000009045 144.0
CMS3_k127_4872030_21 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000007608 138.0
CMS3_k127_4872030_22 Protein of unknown function (DUF1622) - - - 0.0000000000000000000000000000000003237 138.0
CMS3_k127_4872030_23 cold-shock protein K03704 - - 0.000000000000000000000000000000555 124.0
CMS3_k127_4872030_24 Rhodanese Homology Domain - - - 0.0000000000000000000000000009205 117.0
CMS3_k127_4872030_25 COG3209 Rhs family protein - - - 0.0000000000000000000000005566 108.0
CMS3_k127_4872030_3 Histidine kinase K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 563.0
CMS3_k127_4872030_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 380.0
CMS3_k127_4872030_5 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 368.0
CMS3_k127_4872030_6 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 343.0
CMS3_k127_4872030_7 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 311.0
CMS3_k127_4872030_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 323.0
CMS3_k127_4872030_9 (ABC) transporter K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 302.0
CMS3_k127_4876301_0 SPTR A9B8L4 Integrase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 295.0
CMS3_k127_4908316_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 574.0
CMS3_k127_4908316_1 DDE superfamily endonuclease K07494 - - 0.000000000000000000000000004503 126.0
CMS3_k127_4915500_0 NAD synthase K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
CMS3_k127_4924396_0 Histidine kinase - - - 2.506e-233 736.0
CMS3_k127_4924396_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000002307 173.0
CMS3_k127_4926318_0 lyase activity - - - 0.00000000000000000000000000000000000000000000000000001182 199.0
CMS3_k127_4926318_1 Peptidase M50 - - - 0.0000000005472 70.0
CMS3_k127_4926318_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000005788 60.0
CMS3_k127_4947898_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 542.0
CMS3_k127_4951729_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.813e-290 904.0
CMS3_k127_4951729_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 2.045e-281 882.0
CMS3_k127_4951729_10 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009043 293.0
CMS3_k127_4951729_11 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000009228 259.0
CMS3_k127_4951729_12 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005611 256.0
CMS3_k127_4951729_13 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000001304 246.0
CMS3_k127_4951729_14 Competence protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000546 239.0
CMS3_k127_4951729_15 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
CMS3_k127_4951729_16 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000001506 228.0
CMS3_k127_4951729_17 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000004543 225.0
CMS3_k127_4951729_18 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 0.00000000000000000000000000000000000000000000005378 176.0
CMS3_k127_4951729_19 - - - - 0.00000000000000000000000000000000000000005542 158.0
CMS3_k127_4951729_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 524.0
CMS3_k127_4951729_20 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000003454 160.0
CMS3_k127_4951729_21 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000001032 150.0
CMS3_k127_4951729_22 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000005997 111.0
CMS3_k127_4951729_23 rho-dependent transcription termination K19000 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000007877 64.0
CMS3_k127_4951729_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 494.0
CMS3_k127_4951729_4 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 453.0
CMS3_k127_4951729_5 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 429.0
CMS3_k127_4951729_6 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 374.0
CMS3_k127_4951729_7 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 299.0
CMS3_k127_4951729_8 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 301.0
CMS3_k127_4951729_9 PFAM YicC-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 301.0
CMS3_k127_4953995_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.1.98 1.851e-284 878.0
CMS3_k127_4953995_1 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 366.0
CMS3_k127_4953995_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 290.0
CMS3_k127_4953995_3 Phospholipase K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 290.0
CMS3_k127_4970051_0 S23 ribosomal protein - - - 0.00000000000000000000000000000000001554 139.0
CMS3_k127_4970051_2 - - - - 0.000000000000001359 78.0
CMS3_k127_4977472_0 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009888 396.0
CMS3_k127_4977472_1 COG1484 DNA replication protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001753 254.0
CMS3_k127_4977472_2 WD40-like Beta Propeller Repeat - - - 0.00002225 51.0
CMS3_k127_4982823_0 TIGRFAM glycosyltransferase, MGT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004796 258.0
CMS3_k127_4982823_1 MafB19-like deaminase - - - 0.00000000000000000000000000008012 118.0
CMS3_k127_4989326_0 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000001425 241.0
CMS3_k127_4989326_1 transposition, DNA-mediated K02529,K20971 - - 0.0000000000000000000000000000000004636 138.0
CMS3_k127_5009333_0 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 336.0
CMS3_k127_5009333_1 Transposase - - - 0.000000000004386 66.0
CMS3_k127_5009340_0 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 340.0
CMS3_k127_5009340_1 High confidence in function and specificity - - - 0.0000000000000001782 81.0
CMS3_k127_5009340_2 Transposase - - - 0.000003223 51.0
CMS3_k127_5031586_0 general secretion pathway protein D K02453 - - 1.085e-197 637.0
CMS3_k127_5031586_1 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 382.0
CMS3_k127_5031586_2 General secretion pathway protein C K02452 - - 0.0000000000000000000000000000000000000000000000000002501 196.0
CMS3_k127_5041329_0 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.277e-302 932.0
CMS3_k127_5041329_1 Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 4.146e-285 879.0
CMS3_k127_5041329_10 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 414.0
CMS3_k127_5041329_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 409.0
CMS3_k127_5041329_12 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 381.0
CMS3_k127_5041329_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 383.0
CMS3_k127_5041329_14 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 362.0
CMS3_k127_5041329_15 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 362.0
CMS3_k127_5041329_16 Molybdate ABC transporter K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 344.0
CMS3_k127_5041329_17 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 344.0
CMS3_k127_5041329_18 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 346.0
CMS3_k127_5041329_19 molybdenum ABC transporter, periplasmic K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 299.0
CMS3_k127_5041329_2 Nitrogenase component 1 type Oxidoreductase K02587 - - 5.939e-255 793.0
CMS3_k127_5041329_20 PFAM Dinitrogenase reductase ADP-ribosyltransferase K05951 - 2.4.2.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 291.0
CMS3_k127_5041329_21 Transcriptional regulator, ModE family K02019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001084 283.0
CMS3_k127_5041329_22 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001769 278.0
CMS3_k127_5041329_23 Dinitrogenase iron-molybdenum cofactor, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000151 260.0
CMS3_k127_5041329_24 Glutamine amido-transferase K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001407 255.0
CMS3_k127_5041329_25 PFAM response regulator receiver K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001059 246.0
CMS3_k127_5041329_26 Nitrogen fixation protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001207 235.0
CMS3_k127_5041329_27 Putative heavy-metal chelation K09138 - - 0.00000000000000000000000000000000000000000000004976 182.0
CMS3_k127_5041329_28 PFAM Dinitrogenase iron-molybdenum cofactor K02596 - - 0.000000000000000000000000000000000000000006485 159.0
CMS3_k127_5041329_29 Ferredoxin - - - 0.0000000000000000000000000000000000000001005 154.0
CMS3_k127_5041329_3 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 613.0
CMS3_k127_5041329_30 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000008018 150.0
CMS3_k127_5041329_31 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000003198 145.0
CMS3_k127_5041329_32 NifT/FixU protein K02593 - - 0.000000000000000000000000000008165 119.0
CMS3_k127_5041329_33 Rop-like - - - 0.00000000000000000002116 93.0
CMS3_k127_5041329_34 - - - - 0.00000000000000000002215 93.0
CMS3_k127_5041329_35 4Fe-4S binding domain - - - 0.00000000000000000004769 92.0
CMS3_k127_5041329_37 COG0471 Di- and tricarboxylate transporters - - - 0.0000000003413 61.0
CMS3_k127_5041329_38 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0000005841 57.0
CMS3_k127_5041329_39 Fe-S protein K06938 - - 0.000001345 58.0
CMS3_k127_5041329_4 Belongs to the NifD NifK NifE NifN family K02592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 600.0
CMS3_k127_5041329_40 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.00002681 51.0
CMS3_k127_5041329_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 572.0
CMS3_k127_5041329_6 ABC-type antimicrobial peptide transport system, permease component K02004,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 527.0
CMS3_k127_5041329_7 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 519.0
CMS3_k127_5041329_8 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 511.0
CMS3_k127_5041329_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 441.0
CMS3_k127_5070165_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08356 - 1.20.2.1,1.20.9.1 0.0 1265.0
CMS3_k127_5070165_1 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.168e-227 709.0
CMS3_k127_5070165_10 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 423.0
CMS3_k127_5070165_11 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 357.0
CMS3_k127_5070165_12 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 343.0
CMS3_k127_5070165_13 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 342.0
CMS3_k127_5070165_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 336.0
CMS3_k127_5070165_15 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 334.0
CMS3_k127_5070165_16 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 326.0
CMS3_k127_5070165_17 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 325.0
CMS3_k127_5070165_18 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 321.0
CMS3_k127_5070165_19 Transcriptional regulatory protein, C terminal K07659 GO:0000156,GO:0000160,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0035556,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 300.0
CMS3_k127_5070165_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 1.42e-198 625.0
CMS3_k127_5070165_20 Histidine kinase K07638 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 302.0
CMS3_k127_5070165_21 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001211 289.0
CMS3_k127_5070165_22 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001498 276.0
CMS3_k127_5070165_23 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009012 273.0
CMS3_k127_5070165_24 Glycosyl Transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001346 254.0
CMS3_k127_5070165_25 TIGRFAM CRISPR-associated protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000254 241.0
CMS3_k127_5070165_26 DNA polymerase III, delta' K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000003383 246.0
CMS3_k127_5070165_27 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000001964 231.0
CMS3_k127_5070165_28 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008106 225.0
CMS3_k127_5070165_29 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000002794 224.0
CMS3_k127_5070165_3 permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 544.0
CMS3_k127_5070165_30 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000009523 229.0
CMS3_k127_5070165_31 Rieske [2Fe-2S] domain K08355 - 1.20.2.1,1.20.9.1 0.00000000000000000000000000000000000000000000000000000000002877 209.0
CMS3_k127_5070165_32 - - - - 0.00000000000000000000000000000000000000000000000000001139 193.0
CMS3_k127_5070165_33 pilus assembly protein, PilZ K02676 - - 0.0000000000000000000000000000000000000000000000000000173 190.0
CMS3_k127_5070165_34 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000008182 191.0
CMS3_k127_5070165_35 COG2963 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000003153 186.0
CMS3_k127_5070165_36 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000001386 181.0
CMS3_k127_5070165_37 - - - - 0.00000000000000000000000000000000000000000000001918 174.0
CMS3_k127_5070165_38 Part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000000006321 159.0
CMS3_k127_5070165_39 DUF218 domain - - - 0.0000000000000000000000000000000002609 141.0
CMS3_k127_5070165_4 long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 497.0
CMS3_k127_5070165_40 Putative thioesterase (yiiD_Cterm) - - - 0.0000000000000000000000000000000002799 136.0
CMS3_k127_5070165_41 Thioredoxin domain - - - 0.00000000000000000000000000000005369 131.0
CMS3_k127_5070165_42 - - - - 0.00000000000000000000000000008034 123.0
CMS3_k127_5070165_43 dehydratase - - - 0.000000000000000000000000001198 117.0
CMS3_k127_5070165_44 acyl carrier protein K02078 - - 0.000000000000000000000000003314 115.0
CMS3_k127_5070165_45 Sulfurtransferase - - - 0.00000000000000000000000001165 110.0
CMS3_k127_5070165_46 COG2801 Transposase and inactivated derivatives - - - 0.000000000000000000000001448 103.0
CMS3_k127_5070165_48 membrane - - - 0.000000000000000000001711 103.0
CMS3_k127_5070165_49 Sulfite reductase K11181 - 1.8.99.5 0.000000000000000000007734 92.0
CMS3_k127_5070165_5 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 488.0
CMS3_k127_5070165_50 dehydratase - - - 0.000000000000000003855 87.0
CMS3_k127_5070165_51 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000004995 77.0
CMS3_k127_5070165_52 - - - - 0.0000001332 55.0
CMS3_k127_5070165_53 - - - - 0.000009408 54.0
CMS3_k127_5070165_54 - - - - 0.0003034 46.0
CMS3_k127_5070165_6 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 481.0
CMS3_k127_5070165_7 PFAM Integrase, catalytic core K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 472.0
CMS3_k127_5070165_8 PFAM Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 471.0
CMS3_k127_5070165_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000988 424.0
CMS3_k127_5073827_0 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 307.0
CMS3_k127_5125219_0 Alpha-2-Macroglobulin K06894 - - 0.0 1980.0
CMS3_k127_5125219_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1177.0
CMS3_k127_5125219_10 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 586.0
CMS3_k127_5125219_11 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 563.0
CMS3_k127_5125219_12 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 559.0
CMS3_k127_5125219_13 glycyl-tRNA synthetase, alpha subunit K01878 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 551.0
CMS3_k127_5125219_14 PFAM Transglutaminase-like superfamily K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 543.0
CMS3_k127_5125219_15 abc-type branched-chain amino acid transport K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 527.0
CMS3_k127_5125219_16 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 450.0
CMS3_k127_5125219_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 424.0
CMS3_k127_5125219_18 signal transduction histidine kinase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 415.0
CMS3_k127_5125219_19 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 409.0
CMS3_k127_5125219_2 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 3.197e-279 882.0
CMS3_k127_5125219_20 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 404.0
CMS3_k127_5125219_21 Histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 399.0
CMS3_k127_5125219_22 response regulator receiver K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009908 312.0
CMS3_k127_5125219_23 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 291.0
CMS3_k127_5125219_24 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009808 276.0
CMS3_k127_5125219_25 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002637 280.0
CMS3_k127_5125219_26 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007071 274.0
CMS3_k127_5125219_27 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
CMS3_k127_5125219_28 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003944 258.0
CMS3_k127_5125219_29 - K00673 - 2.3.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000001351 248.0
CMS3_k127_5125219_3 Diguanylate cyclase - - - 3.616e-270 865.0
CMS3_k127_5125219_30 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000009615 232.0
CMS3_k127_5125219_31 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000005003 226.0
CMS3_k127_5125219_32 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000001971 203.0
CMS3_k127_5125219_33 Membrane K08988 - - 0.0000000000000000000000000000000000000000000000000000003393 200.0
CMS3_k127_5125219_34 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000000000325 198.0
CMS3_k127_5125219_35 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000001088 164.0
CMS3_k127_5125219_36 Outer Membrane Lipoprotein - - - 0.000000000000000000000000000000006809 135.0
CMS3_k127_5125219_37 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000846 117.0
CMS3_k127_5125219_38 sulfur carrier activity K04085 - - 0.0000000000000000000000000006318 115.0
CMS3_k127_5125219_39 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000001804 113.0
CMS3_k127_5125219_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 7.39e-265 832.0
CMS3_k127_5125219_40 - - - - 0.000000000000000000000006756 109.0
CMS3_k127_5125219_41 - - - - 0.000000000000000000002244 103.0
CMS3_k127_5125219_42 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000002155 74.0
CMS3_k127_5125219_43 Domain of unknown function (DUF4124) - - - 0.00000000002194 72.0
CMS3_k127_5125219_44 - - - - 0.000000002986 61.0
CMS3_k127_5125219_5 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 8.943e-261 808.0
CMS3_k127_5125219_6 SNF2 family N-terminal domain - - - 1.229e-222 720.0
CMS3_k127_5125219_7 nitrogen regulation protein K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 2.897e-219 689.0
CMS3_k127_5125219_8 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 7.852e-209 657.0
CMS3_k127_5125219_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 597.0
CMS3_k127_5130964_0 DEAD DEAH box K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 290.0
CMS3_k127_5130964_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
CMS3_k127_5160687_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 1.844e-207 655.0
CMS3_k127_5160687_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 530.0
CMS3_k127_5160687_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 426.0
CMS3_k127_5160687_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 338.0
CMS3_k127_5160687_4 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 304.0
CMS3_k127_5160687_5 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 304.0
CMS3_k127_5160687_6 Lipid A core - O-antigen ligase and K02847 - - 0.000000000000000000007752 101.0
CMS3_k127_5160687_7 ADP-heptose LPS heptosyltransferase - GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000002588 62.0
CMS3_k127_5203308_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000002397 222.0
CMS3_k127_5206520_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 544.0
CMS3_k127_5206520_1 ATP binding N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004953 261.0
CMS3_k127_5206520_2 PFAM YD repeat-containing protein - - - 0.00000245 56.0
CMS3_k127_5206520_3 PFAM MULE transposase, conserved domain - - - 0.0001043 53.0
CMS3_k127_5235082_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.469e-316 996.0
CMS3_k127_5235082_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.335e-291 902.0
CMS3_k127_5235082_2 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 4.457e-210 672.0
CMS3_k127_5235082_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 538.0
CMS3_k127_5235082_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000008858 163.0
CMS3_k127_5235082_5 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.000000000000000000000000000000003864 134.0
CMS3_k127_5235082_6 Divalent ion tolerance protein K03926 - - 0.00000000000000000000000000000009122 126.0
CMS3_k127_5235082_7 protein conserved in bacteria - - - 0.0000000000000000003362 88.0
CMS3_k127_5235082_8 Lipid A core - O-antigen ligase and K02847 - - 0.00000734 56.0
CMS3_k127_524432_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 4.485e-208 659.0
CMS3_k127_524432_1 Radical SAM - - - 3.667e-198 629.0
CMS3_k127_524432_10 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000006662 98.0
CMS3_k127_524432_11 - - - - 0.000000000000001411 82.0
CMS3_k127_524432_12 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03789,K03790,K03896 - 2.3.1.102,2.3.1.128 0.0000000000001162 72.0
CMS3_k127_524432_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 445.0
CMS3_k127_524432_3 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 380.0
CMS3_k127_524432_4 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 383.0
CMS3_k127_524432_5 ribonuclease BN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 352.0
CMS3_k127_524432_6 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 335.0
CMS3_k127_524432_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001322 273.0
CMS3_k127_524432_8 Protein of unknown function (DUF559) K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000006409 161.0
CMS3_k127_5256643_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000003322 205.0
CMS3_k127_5256643_1 Methyltransferase domain K15942 - 2.1.1.288 0.00000000000000000000000000000000000000000000000000004833 193.0
CMS3_k127_5260294_0 transposition - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 559.0
CMS3_k127_5260294_1 - - - - 0.000000000000001676 82.0
CMS3_k127_5260294_2 DDE superfamily endonuclease - - - 0.00000000000003759 74.0
CMS3_k127_5263419_0 RHS Repeat - - - 0.00000000000000000000009969 106.0
CMS3_k127_5277939_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 2.26e-253 804.0
CMS3_k127_5277939_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.247e-226 713.0
CMS3_k127_5277939_2 small subunit K00534 - 1.12.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 496.0
CMS3_k127_5309593_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 507.0
CMS3_k127_531986_0 P-type ATPase K17686 - 3.6.3.54 1.05e-265 838.0
CMS3_k127_531986_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.642e-234 733.0
CMS3_k127_531986_10 PFAM peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 359.0
CMS3_k127_531986_11 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 349.0
CMS3_k127_531986_12 NnrS protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 345.0
CMS3_k127_531986_13 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001611 284.0
CMS3_k127_531986_14 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002578 258.0
CMS3_k127_531986_15 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000000000000000002162 214.0
CMS3_k127_531986_16 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000009427 191.0
CMS3_k127_531986_17 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000001412 195.0
CMS3_k127_531986_18 Pfam Hemerythrin HHE - - - 0.00000000000000000000000000000000000000000000000001173 184.0
CMS3_k127_531986_19 ATP synthase K02115 - - 0.000000000000000000000000000000000000000000000001705 184.0
CMS3_k127_531986_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.342e-233 729.0
CMS3_k127_531986_20 - K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000002402 155.0
CMS3_k127_531986_21 epsilon subunit K02114 - - 0.00000000000000000000000000000000000006127 150.0
CMS3_k127_531986_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000037 129.0
CMS3_k127_531986_23 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000000000000000000000000002722 127.0
CMS3_k127_531986_24 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000003249 116.0
CMS3_k127_531986_25 sulfur carrier activity K08363 - - 0.000000000000000001925 88.0
CMS3_k127_531986_26 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000128 73.0
CMS3_k127_531986_27 PD-(D/E)XK nuclease superfamily - - - 0.00000000001505 67.0
CMS3_k127_531986_28 Cupredoxin-like domain - - - 0.0004981 44.0
CMS3_k127_531986_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.475e-216 681.0
CMS3_k127_531986_4 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 499.0
CMS3_k127_531986_5 Peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 470.0
CMS3_k127_531986_6 radical SAM protein K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 454.0
CMS3_k127_531986_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 427.0
CMS3_k127_531986_8 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 428.0
CMS3_k127_531986_9 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 398.0
CMS3_k127_5351151_0 AAA ATPase domain - - - 0.0000000000000000000000001385 109.0
CMS3_k127_5351151_1 MFS_1 like family - - - 0.000000000002077 79.0
CMS3_k127_5376623_0 Recombinase zinc beta ribbon domain - - - 1.202e-207 667.0
CMS3_k127_5421266_0 COG2826 Transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 460.0
CMS3_k127_5437160_0 leucine-zipper of insertion element IS481 - - - 0.000000000000000000000000000001774 124.0
CMS3_k127_5437160_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000009636 72.0
CMS3_k127_5487627_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 3.528e-264 829.0
CMS3_k127_5591109_0 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005363 258.0
CMS3_k127_5591109_1 - - - - 0.00000000000000000000000000000000000000001512 156.0
CMS3_k127_5591109_2 IstB domain protein ATP-binding protein - - - 0.0000000000000000000000000000000000006184 150.0
CMS3_k127_5591109_3 - - - - 0.00000000000000000005206 93.0
CMS3_k127_5669176_0 PFAM Integrase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 398.0
CMS3_k127_5669176_1 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001106 241.0
CMS3_k127_5669176_2 Lamin Tail Domain - - - 0.00000000000000002494 91.0
CMS3_k127_568411_0 protein y4pE y4sA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 302.0
CMS3_k127_568411_1 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000000000000000000000000002797 217.0
CMS3_k127_568411_2 Nacht domain - - - 0.00000000000004665 79.0
CMS3_k127_5742263_0 - - - - 0.000003769 57.0
CMS3_k127_5748232_0 Tn3 transposase DDE domain - - - 0.0 1043.0
CMS3_k127_5748232_1 IstB-like ATP binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005768 254.0
CMS3_k127_5748232_10 Transposase and inactivated derivatives - - - 0.0000000008765 72.0
CMS3_k127_5748232_2 Anion-transporting ATPase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003313 255.0
CMS3_k127_5748232_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003165 229.0
CMS3_k127_5748232_4 Nitroreductase family - - - 0.0000000000000000000000000000000000002433 148.0
CMS3_k127_5748232_5 Site-specific recombinases, DNA invertase Pin homologs K14060 - - 0.000000000000000000000000000000002009 133.0
CMS3_k127_5748232_6 Resolvase, N terminal domain - - - 0.00000000000000000000000000000001846 135.0
CMS3_k127_5748232_7 Transposase K00957,K07497 - 2.7.7.4 0.0000000000000000000186 105.0
CMS3_k127_5772854_0 PFAM MULE transposase, conserved domain - - - 0.000000000000000000000000000000000000002596 166.0
CMS3_k127_5783007_0 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000001025 222.0
CMS3_k127_5783007_1 COG2801 Transposase and inactivated derivatives - - - 0.000000000000000000001417 95.0
CMS3_k127_5783007_3 Di-haem cytochrome c peroxidase - - - 0.000004886 48.0
CMS3_k127_5783818_0 Involved in initiation control of chromosome replication - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 396.0
CMS3_k127_5783818_1 Voltage gated chloride channel K03281 - - 0.0000000000000000001025 91.0
CMS3_k127_5791162_0 Transglycosylase associated protein - - - 0.000000000000000000000000008631 111.0
CMS3_k127_5791162_1 Diguanylate cyclase - - - 0.00000000000000000000001275 110.0
CMS3_k127_5791162_2 - - - - 0.00000000000000003512 84.0
CMS3_k127_5791162_3 Iron/manganese superoxide dismutases, alpha-hairpin domain - - - 0.000000000000007323 76.0
CMS3_k127_5791162_4 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000005005 71.0
CMS3_k127_5791162_5 - - - - 0.0000568 48.0
CMS3_k127_5806837_0 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 8.277e-308 952.0
CMS3_k127_5806837_1 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 4.494e-252 798.0
CMS3_k127_5806837_2 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 460.0
CMS3_k127_5806837_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 422.0
CMS3_k127_5806837_4 AAA domain, putative AbiEii toxin, Type IV TA system K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 342.0
CMS3_k127_5806837_5 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 330.0
CMS3_k127_5806837_6 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0000000000000000000000000000000000000000000000000000001765 195.0
CMS3_k127_5806837_7 NosL K19342 - - 0.00000000000000000000000000000000000000000000000007104 185.0
CMS3_k127_5806837_8 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000002378 164.0
CMS3_k127_5808707_0 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000003583 178.0
CMS3_k127_5816970_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1131.0
CMS3_k127_5816970_1 Glycosyl transferase family 21 - - - 0.0 1079.0
CMS3_k127_5816970_10 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 588.0
CMS3_k127_5816970_11 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 564.0
CMS3_k127_5816970_12 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 556.0
CMS3_k127_5816970_13 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 546.0
CMS3_k127_5816970_14 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520 - 1.16.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 531.0
CMS3_k127_5816970_15 Surface antigen variable number K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 504.0
CMS3_k127_5816970_16 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 483.0
CMS3_k127_5816970_17 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) K05844 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 463.0
CMS3_k127_5816970_18 PFAM Succinylglutamate desuccinylase Aspartoacylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 446.0
CMS3_k127_5816970_19 FeS assembly protein SufB K09014 GO:0003674,GO:0005488,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 434.0
CMS3_k127_5816970_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1059.0
CMS3_k127_5816970_20 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0004470,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006099,GO:0006101,GO:0006108,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009060,GO:0009061,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019898,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045333,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 425.0
CMS3_k127_5816970_21 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 379.0
CMS3_k127_5816970_22 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 376.0
CMS3_k127_5816970_23 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 358.0
CMS3_k127_5816970_24 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 353.0
CMS3_k127_5816970_25 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 335.0
CMS3_k127_5816970_26 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 331.0
CMS3_k127_5816970_27 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 335.0
CMS3_k127_5816970_28 FeS assembly ATPase SufC K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 305.0
CMS3_k127_5816970_29 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 319.0
CMS3_k127_5816970_3 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.056e-304 942.0
CMS3_k127_5816970_30 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003583 280.0
CMS3_k127_5816970_31 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008746 280.0
CMS3_k127_5816970_32 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 266.0
CMS3_k127_5816970_33 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000002758 235.0
CMS3_k127_5816970_34 PFAM MucB RseB K03598 - - 0.000000000000000000000000000000000000000000000000000000000000002675 231.0
CMS3_k127_5816970_35 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000007789 224.0
CMS3_k127_5816970_36 Part of a membrane complex involved in electron transport - - - 0.0000000000000000000000000000000000000000000000000000003359 196.0
CMS3_k127_5816970_37 protein conserved in archaea - - - 0.00000000000000000000000000000000000000000000000005001 182.0
CMS3_k127_5816970_38 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000007271 156.0
CMS3_k127_5816970_39 Type II transport protein GspH K08084 - - 0.00000000000000000000000000000000002329 142.0
CMS3_k127_5816970_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.806e-253 789.0
CMS3_k127_5816970_40 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - - - 0.000000000000000000000000000000001816 148.0
CMS3_k127_5816970_41 response to oxidative stress K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000006109 133.0
CMS3_k127_5816970_42 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000001792 130.0
CMS3_k127_5816970_43 - - - - 0.000000000000000000000000000003963 123.0
CMS3_k127_5816970_44 - - - - 0.00000000000000000000000000002881 124.0
CMS3_k127_5816970_45 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.00000000000000000000000000882 117.0
CMS3_k127_5816970_46 protein acetylation - - - 0.0000000000000000000182 98.0
CMS3_k127_5816970_47 Domain of unknown function (DUF4845) - - - 0.000000000000000001512 91.0
CMS3_k127_5816970_48 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000002794 70.0
CMS3_k127_5816970_49 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000002064 57.0
CMS3_k127_5816970_5 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 1.257e-251 788.0
CMS3_k127_5816970_52 - K19168 - - 0.0006163 49.0
CMS3_k127_5816970_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.4.3.16 1.606e-248 777.0
CMS3_k127_5816970_7 protease with the C-terminal PDZ domain - - - 7.674e-240 756.0
CMS3_k127_5816970_8 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 8.476e-226 706.0
CMS3_k127_5816970_9 TamB, inner membrane protein subunit of TAM complex K09800 - - 7.476e-204 679.0
CMS3_k127_5817943_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 6.774e-307 950.0
CMS3_k127_5817943_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.294e-288 895.0
CMS3_k127_5817943_10 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 350.0
CMS3_k127_5817943_11 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000006047 270.0
CMS3_k127_5817943_12 Bacterial lipid A biosynthesis acyltransferase K02560 - 2.3.1.243 0.0000000000000000000000000000000000000000000000000000000000000000000000000002657 268.0
CMS3_k127_5817943_13 Peptidase membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003521 250.0
CMS3_k127_5817943_14 PFAM Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001032 239.0
CMS3_k127_5817943_15 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000006124 236.0
CMS3_k127_5817943_16 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006909 230.0
CMS3_k127_5817943_17 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
CMS3_k127_5817943_18 transcriptional regulator K09017 - - 0.000000000000000000000000000000000000000000000000000000001317 206.0
CMS3_k127_5817943_19 NfeD-like C-terminal, partner-binding K07340 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000001219 197.0
CMS3_k127_5817943_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 9.064e-262 826.0
CMS3_k127_5817943_20 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000001096 192.0
CMS3_k127_5817943_21 Cell division protein K03591 - - 0.00000000000000000000000000000000001942 144.0
CMS3_k127_5817943_23 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000008381 113.0
CMS3_k127_5817943_24 Bacterial-like globin K06886 - - 0.00000000000000007819 85.0
CMS3_k127_5817943_25 Zn-dependent protease with chaperone function - - - 0.0000000000000384 87.0
CMS3_k127_5817943_3 FecR protein - - - 2.027e-245 798.0
CMS3_k127_5817943_4 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 557.0
CMS3_k127_5817943_5 PFAM aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 501.0
CMS3_k127_5817943_6 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 504.0
CMS3_k127_5817943_7 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 449.0
CMS3_k127_5817943_8 PFAM Fructosamine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 382.0
CMS3_k127_5817943_9 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 360.0
CMS3_k127_5837894_0 Capsule polysaccharide biosynthesis protein K07266 - - 3.106e-220 703.0
CMS3_k127_5837894_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 574.0
CMS3_k127_5837894_11 EF hand - - - 0.0000002343 56.0
CMS3_k127_5837894_2 Capsule polysaccharide biosynthesis protein K07265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000858 492.0
CMS3_k127_5837894_3 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 312.0
CMS3_k127_5837894_4 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 295.0
CMS3_k127_5837894_5 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 287.0
CMS3_k127_5837894_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001808 252.0
CMS3_k127_5837894_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000002796 166.0
CMS3_k127_5837894_8 PFAM Stf0 sulphotransferase - - - 0.0000000000000000000000000000000002316 141.0
CMS3_k127_5837894_9 Beta-galactosidase - - - 0.00000000000000000000000000000002275 134.0
CMS3_k127_5841657_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1663.0
CMS3_k127_5841657_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1500.0
CMS3_k127_5841657_10 von Willebrand factor (vWF) type A domain K02448 - - 1.863e-265 834.0
CMS3_k127_5841657_11 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.792e-257 812.0
CMS3_k127_5841657_12 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 3.456e-232 736.0
CMS3_k127_5841657_13 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 1.215e-230 719.0
CMS3_k127_5841657_14 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 9.677e-216 675.0
CMS3_k127_5841657_15 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 7.364e-211 662.0
CMS3_k127_5841657_16 FAD dependent oxidoreductase K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.111e-201 634.0
CMS3_k127_5841657_17 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 2.255e-200 631.0
CMS3_k127_5841657_18 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 4.605e-200 631.0
CMS3_k127_5841657_19 ATPase (AAA K07478 - - 1.205e-196 623.0
CMS3_k127_5841657_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1315.0
CMS3_k127_5841657_20 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 596.0
CMS3_k127_5841657_21 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 592.0
CMS3_k127_5841657_22 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 580.0
CMS3_k127_5841657_23 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006520,GO:0006553,GO:0006563,GO:0006564,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0019842,GO:0030170,GO:0033359,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046394,GO:0046451,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901615,GO:1901617 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 574.0
CMS3_k127_5841657_24 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 550.0
CMS3_k127_5841657_25 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 512.0
CMS3_k127_5841657_26 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 519.0
CMS3_k127_5841657_27 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 499.0
CMS3_k127_5841657_28 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007832 484.0
CMS3_k127_5841657_29 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 485.0
CMS3_k127_5841657_3 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1292.0
CMS3_k127_5841657_30 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 467.0
CMS3_k127_5841657_31 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 463.0
CMS3_k127_5841657_32 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 460.0
CMS3_k127_5841657_33 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 448.0
CMS3_k127_5841657_34 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 447.0
CMS3_k127_5841657_35 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 447.0
CMS3_k127_5841657_36 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 437.0
CMS3_k127_5841657_37 4Fe-4S binding domain K00184,K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 432.0
CMS3_k127_5841657_38 DMSO reductase anchor subunit (DmsC) K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 411.0
CMS3_k127_5841657_39 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 396.0
CMS3_k127_5841657_4 FAD binding domain K00394 - 1.8.99.2 0.0 1264.0
CMS3_k127_5841657_40 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 390.0
CMS3_k127_5841657_41 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 383.0
CMS3_k127_5841657_42 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 386.0
CMS3_k127_5841657_43 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 347.0
CMS3_k127_5841657_44 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 349.0
CMS3_k127_5841657_45 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 319.0
CMS3_k127_5841657_46 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 314.0
CMS3_k127_5841657_47 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 304.0
CMS3_k127_5841657_48 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 298.0
CMS3_k127_5841657_49 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 301.0
CMS3_k127_5841657_5 UPF0313 protein - - - 0.0 1085.0
CMS3_k127_5841657_50 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 316.0
CMS3_k127_5841657_51 Methyltransferase, YaeB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 286.0
CMS3_k127_5841657_52 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007167 273.0
CMS3_k127_5841657_53 HAD-hyrolase-like K01091,K22292 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105,3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000225 271.0
CMS3_k127_5841657_54 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000973 268.0
CMS3_k127_5841657_55 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000008031 267.0
CMS3_k127_5841657_56 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000002384 265.0
CMS3_k127_5841657_57 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003315 265.0
CMS3_k127_5841657_58 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003526 255.0
CMS3_k127_5841657_59 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000002713 226.0
CMS3_k127_5841657_6 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1076.0
CMS3_k127_5841657_60 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000003773 219.0
CMS3_k127_5841657_61 PFAM Rhodanese-like - - - 0.0000000000000000000000000000000000000000000000000000000000007498 214.0
CMS3_k127_5841657_62 High frequency lysogenization protein HflD homolog K07153 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009898,GO:0016020,GO:0019897,GO:0019898,GO:0031234,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0071944,GO:0098552,GO:0098562 - 0.000000000000000000000000000000000000000000000000000000000381 209.0
CMS3_k127_5841657_63 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000001279 187.0
CMS3_k127_5841657_64 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000838 187.0
CMS3_k127_5841657_65 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000009673 180.0
CMS3_k127_5841657_66 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000000002872 169.0
CMS3_k127_5841657_67 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000664 175.0
CMS3_k127_5841657_68 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.000000000000000000000000000000000000000000008018 165.0
CMS3_k127_5841657_69 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000001105 156.0
CMS3_k127_5841657_7 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 4.4e-323 1003.0
CMS3_k127_5841657_70 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000000001146 151.0
CMS3_k127_5841657_71 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000001216 138.0
CMS3_k127_5841657_72 - - - - 0.0000000000000000000000000000001798 130.0
CMS3_k127_5841657_73 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000001275 125.0
CMS3_k127_5841657_74 Peptidase S24-like - - - 0.00000000000000000000000000006955 119.0
CMS3_k127_5841657_75 - - - - 0.0000000000000000000000000004629 117.0
CMS3_k127_5841657_76 TIGRFAM cold shock domain protein CspD K03704 - - 0.00000000000000000006548 91.0
CMS3_k127_5841657_77 competence protein ComEA K02237 - - 0.00000000000000004885 85.0
CMS3_k127_5841657_78 - - - - 0.000000000000001677 82.0
CMS3_k127_5841657_8 cell division protein K03466 - - 1.9e-284 893.0
CMS3_k127_5841657_80 - - - - 0.0000000000005538 75.0
CMS3_k127_5841657_81 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000004947 66.0
CMS3_k127_5841657_82 Belongs to the bacterial histone-like protein family - - - 0.0000000002795 73.0
CMS3_k127_5841657_83 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000001889 65.0
CMS3_k127_5841657_84 IS30 family K07482 - - 0.00000002459 60.0
CMS3_k127_5841657_85 Lysin motif - - - 0.0005267 53.0
CMS3_k127_5841657_9 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766 - 3.62e-284 882.0
CMS3_k127_5849428_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 1.182e-217 685.0
CMS3_k127_5855747_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5e-323 1000.0
CMS3_k127_5855747_1 Hydrolase, alpha beta domain protein - - - 1.685e-258 809.0
CMS3_k127_5855747_10 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001247 259.0
CMS3_k127_5855747_11 CDP-alcohol phosphatidyltransferase K00995 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000002229 214.0
CMS3_k127_5855747_12 - - - - 0.000000000000000000000000000000000000000103 156.0
CMS3_k127_5855747_13 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000005219 138.0
CMS3_k127_5855747_14 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000000000000000000000003363 135.0
CMS3_k127_5855747_16 - - - - 0.00000000001801 70.0
CMS3_k127_5855747_2 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 392.0
CMS3_k127_5855747_3 Dual specificity phosphatase, catalytic domain K01090 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 395.0
CMS3_k127_5855747_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 371.0
CMS3_k127_5855747_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 312.0
CMS3_k127_5855747_6 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 289.0
CMS3_k127_5855747_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001012 281.0
CMS3_k127_5855747_8 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008161 268.0
CMS3_k127_5855747_9 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000001067 261.0
CMS3_k127_5863541_0 COG1030 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 565.0
CMS3_k127_5863541_1 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 405.0
CMS3_k127_5863541_2 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 399.0
CMS3_k127_5863541_3 Methyltransferase K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 305.0
CMS3_k127_5863541_4 FG-GAP repeat - - - 0.0000000000000000000000000002686 117.0
CMS3_k127_5863541_5 Protein of unknown function (DUF2384) - - - 0.000000000000000000006651 96.0
CMS3_k127_5866024_0 Transposase - - - 0.00000000000000000000000000000000000000004671 160.0
CMS3_k127_5866024_1 PFAM IstB domain protein ATP-binding protein - - - 0.000000000000000000000000000000000002903 143.0
CMS3_k127_5869238_0 amino acid peptide transporter K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 418.0
CMS3_k127_5869238_1 Acetyltransferase (GNAT) domain - - - 0.00000006964 54.0
CMS3_k127_5870470_0 Terminase RNaseH-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004188 240.0
CMS3_k127_5870470_1 Bacteriophage head to tail connecting protein - - - 0.000000000000000000000000000000000000000000000000004325 201.0
CMS3_k127_5870470_2 - - - - 0.00000000000000000000000004322 119.0
CMS3_k127_5870470_3 - - - - 0.0000000000000000000006942 106.0
CMS3_k127_5876305_0 Putative exonuclease SbcCD, C subunit - - - 0.0 1188.0
CMS3_k127_5876305_1 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 2.44e-213 686.0
CMS3_k127_5876305_10 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000002911 183.0
CMS3_k127_5876305_11 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000473 185.0
CMS3_k127_5876305_12 Protein of unknown function (DUF2452) - - - 0.0000000000000000000000000000000000000000000003077 171.0
CMS3_k127_5876305_13 - - - - 0.0000000000000000000000000000000001364 139.0
CMS3_k127_5876305_14 - - - - 0.000000000000000000000000000003628 121.0
CMS3_k127_5876305_15 Protein of unknown function (DUF504) - - - 0.0000000000000000000000000002769 119.0
CMS3_k127_5876305_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 487.0
CMS3_k127_5876305_3 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 393.0
CMS3_k127_5876305_4 ZIP Zinc transporter K07238 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015086,GO:0015087,GO:0015093,GO:0015318,GO:0015684,GO:0015691,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0034755,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070574,GO:0070838,GO:0071421,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903874 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008702 274.0
CMS3_k127_5876305_5 Thioredoxin K07396 - - 0.000000000000000000000000000000000000000000000000000000000000000000009885 239.0
CMS3_k127_5876305_6 Uncharacterized protein conserved in bacteria C-term(DUF2220) - - - 0.00000000000000000000000000000000000000000000000000000000000000004087 236.0
CMS3_k127_5876305_7 Domain of unknown function (DUF4194) - - - 0.00000000000000000000000000000000000000000000000000000000000007517 220.0
CMS3_k127_5876305_8 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000003282 211.0
CMS3_k127_5876305_9 THUMP - - - 0.0000000000000000000000000000000000000000000000000000867 194.0
CMS3_k127_5882453_0 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000006327 82.0
CMS3_k127_5887228_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000003145 121.0
CMS3_k127_5887228_1 COG2801 Transposase and inactivated derivatives - - - 0.000000000000005511 79.0
CMS3_k127_5887228_2 Sel1-like repeats. K07126 - - 0.00000000004846 66.0
CMS3_k127_5887740_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 9.746e-305 970.0
CMS3_k127_5887740_1 double-strand break repair protein AddB K16899 - 3.6.4.12 2.736e-248 799.0
CMS3_k127_5887740_10 PFAM Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001719 277.0
CMS3_k127_5887740_11 Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000076 259.0
CMS3_k127_5887740_12 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000002344 240.0
CMS3_k127_5887740_13 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000001593 214.0
CMS3_k127_5887740_14 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000001592 204.0
CMS3_k127_5887740_15 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000001328 199.0
CMS3_k127_5887740_16 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000001822 198.0
CMS3_k127_5887740_17 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000003323 156.0
CMS3_k127_5887740_18 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003598 136.0
CMS3_k127_5887740_19 PFAM Forkhead-associated protein - - - 0.000000000000000000000000000001858 128.0
CMS3_k127_5887740_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 5.677e-214 673.0
CMS3_k127_5887740_20 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000002386 118.0
CMS3_k127_5887740_21 PFAM CHAD domain containing protein - - - 0.000000000000000000005111 104.0
CMS3_k127_5887740_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 6.335e-194 614.0
CMS3_k127_5887740_4 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 527.0
CMS3_k127_5887740_5 recombinase XerD K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 404.0
CMS3_k127_5887740_6 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 357.0
CMS3_k127_5887740_7 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 330.0
CMS3_k127_5887740_9 cAMP phosphodiesterases class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003304 277.0
CMS3_k127_5905218_0 reverse transcriptase K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000009395 213.0
CMS3_k127_5905218_1 amidohydrolase K07045 - - 0.000000000000000000000000000000003096 131.0
CMS3_k127_5908137_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001395 261.0
CMS3_k127_5921029_0 Beta-lactamase superfamily domain K00784 - 3.1.26.11 9.42e-207 663.0
CMS3_k127_5921029_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 304.0
CMS3_k127_5921029_2 reverse transcriptase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003268 281.0
CMS3_k127_5921029_3 - - - - 0.000000000000000000000000000000000000000000000000000002297 207.0
CMS3_k127_5944434_0 RES - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009858 276.0
CMS3_k127_5944434_1 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000000000000000001277 168.0
CMS3_k127_5956628_0 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 579.0
CMS3_k127_5958829_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 4.895e-233 730.0
CMS3_k127_5958829_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 558.0
CMS3_k127_5958829_10 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005233 241.0
CMS3_k127_5958829_11 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000009738 215.0
CMS3_k127_5958829_12 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000002002 207.0
CMS3_k127_5958829_13 pilus organization K07346 - - 0.0000000000000000000000000000000000000000000000000000000004087 211.0
CMS3_k127_5958829_14 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000001117 166.0
CMS3_k127_5958829_15 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000005608 145.0
CMS3_k127_5958829_16 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000006215 103.0
CMS3_k127_5958829_17 Spore Coat Protein U domain - - - 0.000000000000000000114 94.0
CMS3_k127_5958829_2 Belongs to the dihydroorotate dehydrogenase family K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 533.0
CMS3_k127_5958829_3 Outer membrane usher protein K07347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 520.0
CMS3_k127_5958829_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 398.0
CMS3_k127_5958829_5 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 389.0
CMS3_k127_5958829_6 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 316.0
CMS3_k127_5958829_7 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 319.0
CMS3_k127_5958829_8 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000000002997 237.0
CMS3_k127_5958829_9 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000003322 243.0
CMS3_k127_5989661_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.138e-234 727.0
CMS3_k127_6028474_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1340.0
CMS3_k127_6028474_1 TIGRFAM Outer membrane protein K13735,K20276 - - 0.0 1096.0
CMS3_k127_6028474_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000142 266.0
CMS3_k127_6028474_11 Lytic transglycolase K20628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001513 247.0
CMS3_k127_6028474_12 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003705 248.0
CMS3_k127_6028474_13 iron-storage protein K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000008016 233.0
CMS3_k127_6028474_14 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000002295 230.0
CMS3_k127_6028474_15 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000009767 216.0
CMS3_k127_6028474_16 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000001284 225.0
CMS3_k127_6028474_17 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000001558 217.0
CMS3_k127_6028474_18 PFAM NifZ K02597 - - 0.0000000000000000000000000000000000000000000000000000002505 201.0
CMS3_k127_6028474_19 AefR-like transcriptional repressor, C-terminal region K18301 - - 0.00000000000000000000000000000000000000000002548 168.0
CMS3_k127_6028474_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 8.786e-216 674.0
CMS3_k127_6028474_20 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000008571 164.0
CMS3_k127_6028474_21 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000000001372 138.0
CMS3_k127_6028474_23 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000002578 123.0
CMS3_k127_6028474_24 conserved protein - - - 0.000000000000000000000000003668 112.0
CMS3_k127_6028474_25 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.00000000000000000000000001052 112.0
CMS3_k127_6028474_26 reverse transcriptase - - - 0.0000000000000000000000001272 107.0
CMS3_k127_6028474_27 Outer membrane protein beta-barrel domain - - - 0.000000000000000000003214 102.0
CMS3_k127_6028474_28 reverse transcriptase - - - 0.00000000000000305 77.0
CMS3_k127_6028474_29 COG1943 Transposase and inactivated derivatives - - - 0.0000000000004962 72.0
CMS3_k127_6028474_3 Diguanylate cyclase - - - 2.653e-194 639.0
CMS3_k127_6028474_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 5.187e-194 616.0
CMS3_k127_6028474_5 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 507.0
CMS3_k127_6028474_6 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 498.0
CMS3_k127_6028474_7 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 477.0
CMS3_k127_6028474_8 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 378.0
CMS3_k127_6028474_9 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 344.0
CMS3_k127_6041185_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1032.0
CMS3_k127_6041185_1 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 1.12e-282 888.0
CMS3_k127_6041185_10 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007521 436.0
CMS3_k127_6041185_11 sulfur carrier activity K04085,K07112 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 418.0
CMS3_k127_6041185_12 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 376.0
CMS3_k127_6041185_13 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 378.0
CMS3_k127_6041185_14 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 389.0
CMS3_k127_6041185_15 TonB-dependent Receptor Plug K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 365.0
CMS3_k127_6041185_16 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 354.0
CMS3_k127_6041185_17 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 336.0
CMS3_k127_6041185_18 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 333.0
CMS3_k127_6041185_19 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 324.0
CMS3_k127_6041185_2 Sulfate permease and related transporters (MFS superfamily) K03321 - - 2.524e-246 768.0
CMS3_k127_6041185_20 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 313.0
CMS3_k127_6041185_21 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 313.0
CMS3_k127_6041185_22 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002128 255.0
CMS3_k127_6041185_23 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003068 247.0
CMS3_k127_6041185_24 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000003497 252.0
CMS3_k127_6041185_25 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000003227 248.0
CMS3_k127_6041185_26 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000008211 239.0
CMS3_k127_6041185_27 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000001119 225.0
CMS3_k127_6041185_28 WLM domain K07043 - - 0.00000000000000000000000000000000000000000000000000000000002957 214.0
CMS3_k127_6041185_29 COG1734 DnaK suppressor protein K06204 - - 0.0000000000000000000000000000008392 127.0
CMS3_k127_6041185_3 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 596.0
CMS3_k127_6041185_31 Chemoreceptor zinc-binding domain - - - 0.00000000000000000000005407 104.0
CMS3_k127_6041185_32 sulfur carrier activity K07112 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000000000000000005263 95.0
CMS3_k127_6041185_33 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000749 80.0
CMS3_k127_6041185_34 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.0000439 46.0
CMS3_k127_6041185_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 604.0
CMS3_k127_6041185_5 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 578.0
CMS3_k127_6041185_6 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 542.0
CMS3_k127_6041185_7 Phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 483.0
CMS3_k127_6041185_8 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 471.0
CMS3_k127_6041185_9 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 457.0
CMS3_k127_6052325_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000002636 128.0
CMS3_k127_6084211_0 Transposase K07492 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 303.0
CMS3_k127_6120817_0 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 486.0
CMS3_k127_6120817_1 PFAM MULE transposase, conserved domain - - - 0.00000000000000000000000000000000000002046 163.0
CMS3_k127_6130073_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 505.0
CMS3_k127_6131312_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0000000000000002012 87.0
CMS3_k127_6131312_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000003464 63.0
CMS3_k127_6131312_2 sh3 domain protein K12132,K15539 - 2.7.11.1 0.000638 51.0
CMS3_k127_613545_0 PFAM transposase IS4 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 416.0
CMS3_k127_613545_1 defense response to virus - - - 0.000000000000002088 76.0
CMS3_k127_6137453_0 Transposase K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 468.0
CMS3_k127_6137453_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000004446 122.0
CMS3_k127_6137547_0 Peptidase_C39 like family - - - 9.456e-243 810.0
CMS3_k127_6137547_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072,K11076 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 523.0
CMS3_k127_6137547_2 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 476.0
CMS3_k127_6137547_3 Required for the activity of the bacterial periplasmic transport system of putrescine K11073 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 426.0
CMS3_k127_6137547_4 Putrescine transport system permease K11075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 420.0
CMS3_k127_6137547_5 PFAM binding-protein-dependent transport systems inner membrane component K11070,K11074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 396.0
CMS3_k127_6137547_6 Zinc-uptake complex component A periplasmic K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 347.0
CMS3_k127_6137547_7 ABC-3 protein K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006234 274.0
CMS3_k127_6137547_8 Uncharacterized protein conserved in bacteria C-term(DUF2220) - - - 0.000000000000002609 80.0
CMS3_k127_6137547_9 DDE domain K07497 - - 0.0000000000001126 71.0
CMS3_k127_6140546_0 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 535.0
CMS3_k127_6140546_1 DSBA-like thioredoxin domain - - - 0.00000000000000000009918 89.0
CMS3_k127_6151460_0 - - - - 0.00000001421 61.0
CMS3_k127_623578_0 TIGRFAM SagB-type dehydrogenase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 574.0
CMS3_k127_623578_1 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 393.0
CMS3_k127_623578_10 Metallo-beta-lactamase superfamily - - - 0.00000000006654 66.0
CMS3_k127_623578_2 FG-GAP repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 321.0
CMS3_k127_623578_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000002199 213.0
CMS3_k127_623578_4 Ankyrin repeat K06867 - - 0.0000000000000000000000000000000000001204 146.0
CMS3_k127_623578_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000001413 145.0
CMS3_k127_623578_6 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000000000339 119.0
CMS3_k127_623578_7 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000000000000000004543 114.0
CMS3_k127_623578_8 NifZ domain K02597 - - 0.0000000000000000007872 89.0
CMS3_k127_623578_9 YqjK-like protein - - - 0.00000000000004677 75.0
CMS3_k127_6248520_0 transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003641 263.0
CMS3_k127_6251664_0 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 288.0
CMS3_k127_6251664_1 Transposase K07497 - - 0.0000000000000000000000000000005428 123.0
CMS3_k127_6266892_0 Helix-turn-helix domain of transposase family ISL3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 459.0
CMS3_k127_6266892_1 Evidence 2b Function of strongly homologous gene - - - 0.000004433 51.0
CMS3_k127_6266892_2 LysR substrate binding domain - - - 0.000008878 51.0
CMS3_k127_627897_0 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 417.0
CMS3_k127_627897_1 PFAM ABC transporter related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 390.0
CMS3_k127_627897_2 Integrase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 257.0
CMS3_k127_627897_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000001077 201.0
CMS3_k127_6317221_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1321.0
CMS3_k127_6317221_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1224.0
CMS3_k127_6317221_10 TIGRFAM ribonuclease, Rne Rng family K08301 - - 1.055e-208 659.0
CMS3_k127_6317221_100 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.00000000000000000000000000000000006264 139.0
CMS3_k127_6317221_101 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000001093 135.0
CMS3_k127_6317221_102 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000002008 124.0
CMS3_k127_6317221_103 Phosphotransferase System K11189 - - 0.0000000000000000000000000004073 116.0
CMS3_k127_6317221_104 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000000000000000000000001039 111.0
CMS3_k127_6317221_105 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000002444 106.0
CMS3_k127_6317221_106 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000005155 106.0
CMS3_k127_6317221_107 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000001659 93.0
CMS3_k127_6317221_108 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000002456 95.0
CMS3_k127_6317221_109 - - - - 0.00000000000000000003906 91.0
CMS3_k127_6317221_11 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.092e-208 655.0
CMS3_k127_6317221_110 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000000000003146 91.0
CMS3_k127_6317221_111 - - - - 0.000000000000000003367 87.0
CMS3_k127_6317221_114 Belongs to the BolA IbaG family - - - 0.000000000000001048 81.0
CMS3_k127_6317221_115 - - - - 0.00000000000000995 78.0
CMS3_k127_6317221_116 COG3170 Tfp pilus assembly protein FimV K07288,K08086 - - 0.00000000000007099 83.0
CMS3_k127_6317221_117 Protein of unknown function (DUF721) - - - 0.0000000000001963 76.0
CMS3_k127_6317221_118 Protein of unknown function DUF72 - - - 0.0000000000008959 76.0
CMS3_k127_6317221_119 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000396 74.0
CMS3_k127_6317221_12 Ammonium Transporter Family K03320,K06580 - - 4.454e-205 644.0
CMS3_k127_6317221_120 Heavy-metal-associated domain K07213 - - 0.00000000001435 66.0
CMS3_k127_6317221_13 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.15e-203 644.0
CMS3_k127_6317221_14 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.514e-203 642.0
CMS3_k127_6317221_15 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 3.457e-202 636.0
CMS3_k127_6317221_16 PFAM sodium alanine symporter K03310 - - 2.719e-198 626.0
CMS3_k127_6317221_17 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 2.123e-194 616.0
CMS3_k127_6317221_18 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 601.0
CMS3_k127_6317221_19 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 571.0
CMS3_k127_6317221_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1208.0
CMS3_k127_6317221_20 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 559.0
CMS3_k127_6317221_21 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 552.0
CMS3_k127_6317221_22 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 538.0
CMS3_k127_6317221_23 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 522.0
CMS3_k127_6317221_24 Type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 522.0
CMS3_k127_6317221_25 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 516.0
CMS3_k127_6317221_26 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007237 516.0
CMS3_k127_6317221_27 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 507.0
CMS3_k127_6317221_28 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 491.0
CMS3_k127_6317221_29 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 484.0
CMS3_k127_6317221_3 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0 1075.0
CMS3_k127_6317221_30 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 494.0
CMS3_k127_6317221_31 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 454.0
CMS3_k127_6317221_32 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 446.0
CMS3_k127_6317221_33 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 474.0
CMS3_k127_6317221_34 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 440.0
CMS3_k127_6317221_35 Trypsin K04691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 436.0
CMS3_k127_6317221_36 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 424.0
CMS3_k127_6317221_37 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 420.0
CMS3_k127_6317221_38 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000478 415.0
CMS3_k127_6317221_39 PFAM LppC K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 422.0
CMS3_k127_6317221_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 1.948e-257 805.0
CMS3_k127_6317221_40 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 395.0
CMS3_k127_6317221_41 Aminotransferase class I and II K00817,K02225 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 400.0
CMS3_k127_6317221_42 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 401.0
CMS3_k127_6317221_43 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 392.0
CMS3_k127_6317221_44 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 391.0
CMS3_k127_6317221_45 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 386.0
CMS3_k127_6317221_46 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 385.0
CMS3_k127_6317221_47 COG0530 Ca2 Na antiporter K07301 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0008150,GO:0008273,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015081,GO:0015085,GO:0015267,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0019725,GO:0022803,GO:0022804,GO:0022821,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030955,GO:0031224,GO:0031226,GO:0031402,GO:0031420,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071804,GO:0071805,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 382.0
CMS3_k127_6317221_48 ABC transporter ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 367.0
CMS3_k127_6317221_49 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 348.0
CMS3_k127_6317221_5 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 2.558e-222 700.0
CMS3_k127_6317221_50 PFAM CBS domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 349.0
CMS3_k127_6317221_51 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 344.0
CMS3_k127_6317221_52 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 350.0
CMS3_k127_6317221_53 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 343.0
CMS3_k127_6317221_54 Esterase of the alpha-beta hydrolase superfamily K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 342.0
CMS3_k127_6317221_55 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 334.0
CMS3_k127_6317221_56 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 337.0
CMS3_k127_6317221_57 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 335.0
CMS3_k127_6317221_58 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 326.0
CMS3_k127_6317221_59 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 326.0
CMS3_k127_6317221_6 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 1.711e-219 685.0
CMS3_k127_6317221_60 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 324.0
CMS3_k127_6317221_61 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 330.0
CMS3_k127_6317221_62 metal-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 312.0
CMS3_k127_6317221_63 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 311.0
CMS3_k127_6317221_64 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 309.0
CMS3_k127_6317221_65 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 306.0
CMS3_k127_6317221_66 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 295.0
CMS3_k127_6317221_67 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001015 281.0
CMS3_k127_6317221_68 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006924 274.0
CMS3_k127_6317221_69 Stringent starvation protein A K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002741 273.0
CMS3_k127_6317221_7 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.775e-218 685.0
CMS3_k127_6317221_70 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000001743 262.0
CMS3_k127_6317221_71 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001393 266.0
CMS3_k127_6317221_72 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002284 265.0
CMS3_k127_6317221_73 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008821 259.0
CMS3_k127_6317221_74 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000001847 255.0
CMS3_k127_6317221_75 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000001087 242.0
CMS3_k127_6317221_76 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 0.00000000000000000000000000000000000000000000000000000000000000000004218 239.0
CMS3_k127_6317221_77 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008819,GO:0008820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0033554,GO:0044237,GO:0050896,GO:0051716,GO:0070568 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000000000000003588 232.0
CMS3_k127_6317221_78 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046983,GO:0070037,GO:0070038,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000006356 230.0
CMS3_k127_6317221_79 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000148 215.0
CMS3_k127_6317221_8 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 9.571e-215 672.0
CMS3_k127_6317221_80 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000001597 218.0
CMS3_k127_6317221_81 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000002245 214.0
CMS3_k127_6317221_82 2OG-Fe(II) oxygenase K07394 - - 0.000000000000000000000000000000000000000000000000000000004219 206.0
CMS3_k127_6317221_83 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000004698 202.0
CMS3_k127_6317221_84 PFAM toluene tolerance K07323 - - 0.000000000000000000000000000000000000000000000000000004192 197.0
CMS3_k127_6317221_85 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000002376 199.0
CMS3_k127_6317221_86 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000006342 190.0
CMS3_k127_6317221_87 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001702 185.0
CMS3_k127_6317221_88 Clan AA aspartic protease K06985 - - 0.00000000000000000000000000000000000000000000000000379 188.0
CMS3_k127_6317221_89 Belongs to the UPF0260 family K09160 - - 0.00000000000000000000000000000000000000000000000005928 182.0
CMS3_k127_6317221_9 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.26e-214 681.0
CMS3_k127_6317221_90 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.0000000000000000000000000000000000000000000000001545 180.0
CMS3_k127_6317221_91 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000006689 185.0
CMS3_k127_6317221_92 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 0.000000000000000000000000000000000000000000000002763 183.0
CMS3_k127_6317221_93 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000005835 173.0
CMS3_k127_6317221_94 PFAM Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000002093 168.0
CMS3_k127_6317221_95 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000000000000000005261 165.0
CMS3_k127_6317221_96 Belongs to the UPF0307 family K09889 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000001248 168.0
CMS3_k127_6317221_97 Zinc-ribbon containing domain - - - 0.0000000000000000000000000000000000000000005928 163.0
CMS3_k127_6317221_98 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000001236 159.0
CMS3_k127_6317221_99 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000003258 152.0
CMS3_k127_6319095_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 2.206e-291 905.0
CMS3_k127_6319095_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.055e-255 802.0
CMS3_k127_6319095_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 474.0
CMS3_k127_6319095_11 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 398.0
CMS3_k127_6319095_12 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 376.0
CMS3_k127_6319095_13 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 369.0
CMS3_k127_6319095_14 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 370.0
CMS3_k127_6319095_15 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 363.0
CMS3_k127_6319095_16 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 343.0
CMS3_k127_6319095_17 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 310.0
CMS3_k127_6319095_18 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 293.0
CMS3_k127_6319095_19 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 291.0
CMS3_k127_6319095_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.311e-234 763.0
CMS3_k127_6319095_20 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002358 284.0
CMS3_k127_6319095_21 Belongs to the SfsA family K06206 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005975,GO:0006355,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044238,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006118 271.0
CMS3_k127_6319095_22 subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000002827 265.0
CMS3_k127_6319095_23 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 262.0
CMS3_k127_6319095_24 Inhibitor of apoptosis-promoting Bax1 K19416 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016021,GO:0019222,GO:0030162,GO:0031224,GO:0044425,GO:0044464,GO:0050789,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071944,GO:0080090 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002912 261.0
CMS3_k127_6319095_25 Maf-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005868 256.0
CMS3_k127_6319095_26 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000167 237.0
CMS3_k127_6319095_27 protein conserved in bacteria K09928 - - 0.00000000000000000000000000000000000000000000000000000000000003158 219.0
CMS3_k127_6319095_28 low molecular weight K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000002899 212.0
CMS3_k127_6319095_29 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000007239 190.0
CMS3_k127_6319095_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 2.545e-234 734.0
CMS3_k127_6319095_30 COG0848 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000001368 154.0
CMS3_k127_6319095_31 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000001701 136.0
CMS3_k127_6319095_32 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000006853 137.0
CMS3_k127_6319095_33 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000006819 101.0
CMS3_k127_6319095_34 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000001039 98.0
CMS3_k127_6319095_36 - - - - 0.000000101 54.0
CMS3_k127_6319095_37 domain, Protein - - - 0.0000001665 62.0
CMS3_k127_6319095_38 Resolvase, N terminal domain - - - 0.0000002405 54.0
CMS3_k127_6319095_39 - - - - 0.000001771 49.0
CMS3_k127_6319095_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.176e-202 637.0
CMS3_k127_6319095_41 Lipase (class 3) K01046 - 3.1.1.3 0.0003709 52.0
CMS3_k127_6319095_42 - - - - 0.0004867 48.0
CMS3_k127_6319095_5 DNA internalization-related competence protein ComEC Rec2 K02238 - - 7.279e-202 653.0
CMS3_k127_6319095_6 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 1.97e-196 628.0
CMS3_k127_6319095_7 Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 583.0
CMS3_k127_6319095_8 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 567.0
CMS3_k127_6319095_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 511.0
CMS3_k127_63535_0 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 5.776e-215 677.0
CMS3_k127_63535_1 IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000000000002071 162.0
CMS3_k127_63535_2 - - - - 0.0003851 45.0
CMS3_k127_6383733_0 Transposase - - - 4.318e-204 649.0
CMS3_k127_6383733_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000001136 85.0
CMS3_k127_6386245_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005598 264.0
CMS3_k127_6431_0 Cytochrome c oxidase subunit K00376 - 1.7.2.4 5e-324 1000.0
CMS3_k127_6431_1 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 4.112e-290 906.0
CMS3_k127_6431_10 oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 576.0
CMS3_k127_6431_11 Cytochrome c bacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 593.0
CMS3_k127_6431_12 cytochrome d1, heme region K19345 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 563.0
CMS3_k127_6431_13 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 551.0
CMS3_k127_6431_14 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 511.0
CMS3_k127_6431_15 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 420.0
CMS3_k127_6431_16 Bacterial Ig-like domain (group 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 419.0
CMS3_k127_6431_17 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 397.0
CMS3_k127_6431_18 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 371.0
CMS3_k127_6431_19 AAA domain, putative AbiEii toxin, Type IV TA system K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 367.0
CMS3_k127_6431_2 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 2.483e-286 887.0
CMS3_k127_6431_20 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009426 330.0
CMS3_k127_6431_21 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 296.0
CMS3_k127_6431_22 Protein of unknown function (DUF3549) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 297.0
CMS3_k127_6431_23 Cytochrome c oxidase subunit III K02164,K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000179 268.0
CMS3_k127_6431_24 Cytochrome c K02305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004308 240.0
CMS3_k127_6431_25 Nitrite reductase heme biosynthesis H protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005363 236.0
CMS3_k127_6431_26 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000001738 211.0
CMS3_k127_6431_27 heme biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000002235 208.0
CMS3_k127_6431_28 Protein of unknown function (DUF454) K09790 - - 0.000000000000000000000000000000000000000000003291 167.0
CMS3_k127_6431_29 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000408 168.0
CMS3_k127_6431_3 Cytochrome bd terminal oxidase subunit I K00425 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 3.344e-270 839.0
CMS3_k127_6431_30 PFAM NosL family protein K19342 - - 0.0000000000000000000000000000000000000233 153.0
CMS3_k127_6431_31 - - - - 0.00000000000000000000000000000000007939 137.0
CMS3_k127_6431_32 Domain of unknown function (DUF3817) - - - 0.00000000000000000000000000002665 119.0
CMS3_k127_6431_33 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.0000000000000000000000000000685 121.0
CMS3_k127_6431_34 - - - - 0.0000000000000000000000000001759 120.0
CMS3_k127_6431_35 - - - - 0.0000000000000000000000000007896 119.0
CMS3_k127_6431_36 RNA recognition motif K03655,K05592 - 3.6.4.12,3.6.4.13 0.0000000000000000000000508 104.0
CMS3_k127_6431_37 Belongs to the UPF0061 (SELO) family K08997 - - 0.0000000000000006577 77.0
CMS3_k127_6431_38 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000008132 77.0
CMS3_k127_6431_39 cyd operon protein YbgE - - - 0.00000000001978 67.0
CMS3_k127_6431_4 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 6.854e-261 809.0
CMS3_k127_6431_40 Cyd operon protein YbgT K00424 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 0.00000000002157 64.0
CMS3_k127_6431_41 Protein of unknown function (DUF2621) - - - 0.0000009537 59.0
CMS3_k127_6431_5 ABC transporter CydDC cysteine exporter (CydDC-E) family permease ATP-binding protein CydD K16013,K16014 - - 3.251e-247 805.0
CMS3_k127_6431_6 Cytochrome D1 heme domain - - - 2.111e-225 709.0
CMS3_k127_6431_7 PFAM von Willebrand factor type A K02448 - - 8.811e-217 689.0
CMS3_k127_6431_8 lysine 2,3-aminomutase K01843 - 5.4.3.2 2.113e-210 662.0
CMS3_k127_6431_9 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 601.0
CMS3_k127_645585_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2220.0
CMS3_k127_645585_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1165.0
CMS3_k127_645585_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1092.0
CMS3_k127_645585_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007123 245.0
CMS3_k127_645585_4 Ribosomal protein S12/S23 K02950 GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000009566 233.0
CMS3_k127_645585_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000006969 196.0
CMS3_k127_6490288_0 Transposase and inactivated derivatives K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 367.0
CMS3_k127_6495120_0 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 435.0
CMS3_k127_6495120_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 438.0
CMS3_k127_6495120_2 COG3547 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 424.0
CMS3_k127_6496823_0 COG0583 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 436.0
CMS3_k127_6496823_1 Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 429.0
CMS3_k127_6496823_10 zinc-finger binding domain of transposase IS66 - - - 0.0007442 43.0
CMS3_k127_6496823_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 385.0
CMS3_k127_6496823_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 364.0
CMS3_k127_6496823_4 IS66 Orf2 like protein K07484 - - 0.0000000000000000000000000000000000000000000000000000000000008875 212.0
CMS3_k127_6496823_5 Aldo/keto reductase family K06222 - 1.1.1.346 0.00000000000000000000000000000000000000000000000000223 186.0
CMS3_k127_6496823_6 IS66 C-terminal element K07484 - - 0.00000000000000000000000000002423 124.0
CMS3_k127_6496823_7 IS66 Orf2 like protein K07484 - - 0.0000000000000000000000000008026 119.0
CMS3_k127_6559487_0 Adenylate and Guanylate cyclase catalytic domain - - - 1.334e-239 779.0
CMS3_k127_6559487_1 PFAM Integrase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 557.0
CMS3_k127_6559487_2 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 367.0
CMS3_k127_6559487_3 protein conserved in bacteria K21470 - - 0.00000005856 57.0
CMS3_k127_6566027_0 PFAM Integrase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000001213 223.0
CMS3_k127_6566027_1 COG3267 Type II secretory pathway, component ExeA - - - 0.000000000000000007899 94.0
CMS3_k127_6566027_2 Transposase - - - 0.0002588 50.0
CMS3_k127_6727910_0 High confidence in function and specificity K07484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 501.0
CMS3_k127_6740633_0 transposition K07497 - - 0.0000000000000005881 92.0
CMS3_k127_6740633_1 - - - - 0.0005261 46.0
CMS3_k127_6753732_0 - - - - 0.0000000000000000008773 94.0
CMS3_k127_6753732_1 - - - - 0.000000000001537 75.0
CMS3_k127_6754221_0 Transcriptional regulator K22105 - - 0.000000000000000000000000000000000000001305 156.0
CMS3_k127_6754461_0 Cytochrome b/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 310.0
CMS3_k127_6754461_1 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000008171 220.0
CMS3_k127_6754461_2 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000003023 178.0
CMS3_k127_6754461_3 Cytochrome b/b6/petB - - - 0.0000000000000000000000000000000000000000000006134 173.0
CMS3_k127_6754461_4 PFAM Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000006691 165.0
CMS3_k127_6754461_5 Domain of unknown function (DUF1924) - - - 0.0000000000000000000000000000000000000002686 153.0
CMS3_k127_6756745_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.372e-278 865.0
CMS3_k127_6756745_1 ResB-like family K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 621.0
CMS3_k127_6756745_10 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002084 258.0
CMS3_k127_6756745_11 HPP family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001625 247.0
CMS3_k127_6756745_12 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000000000000000000000000002512 232.0
CMS3_k127_6756745_13 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000007332 222.0
CMS3_k127_6756745_14 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000000000000105 205.0
CMS3_k127_6756745_15 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000002397 200.0
CMS3_k127_6756745_16 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000006009 203.0
CMS3_k127_6756745_17 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000008009 180.0
CMS3_k127_6756745_18 Bacterial Ig-like domain 2 - - - 0.0000000000000000000000000000000000000001137 174.0
CMS3_k127_6756745_19 PFAM Kelch - - - 0.0000000000000000000000000006601 132.0
CMS3_k127_6756745_2 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 557.0
CMS3_k127_6756745_20 PFAM cytochrome c, class I - - - 0.0000000000000000000000002278 108.0
CMS3_k127_6756745_21 COG1943 Transposase and inactivated derivatives K07491 - - 0.00000000000003474 73.0
CMS3_k127_6756745_22 - - - - 0.0000000000003948 75.0
CMS3_k127_6756745_23 COG1943 Transposase and inactivated derivatives - - - 0.000000000003047 70.0
CMS3_k127_6756745_24 Galactose oxidase, central domain - - - 0.0000001204 66.0
CMS3_k127_6756745_25 cellulase activity - - - 0.00003924 57.0
CMS3_k127_6756745_3 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 546.0
CMS3_k127_6756745_4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 428.0
CMS3_k127_6756745_5 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 351.0
CMS3_k127_6756745_6 PFAM cation efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 302.0
CMS3_k127_6756745_7 Flavin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 297.0
CMS3_k127_6756745_8 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 296.0
CMS3_k127_6756745_9 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 297.0
CMS3_k127_6765757_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 352.0
CMS3_k127_6765757_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 301.0
CMS3_k127_6765757_2 YARHG domain - - - 0.00000000000000000000000000000000000000000000001868 178.0
CMS3_k127_6765757_3 double-strand break repair K09946 GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000158 160.0
CMS3_k127_6777575_0 - - - - 0.000000000000000000000002914 102.0
CMS3_k127_6777575_1 - - - - 0.000000000000004266 77.0
CMS3_k127_6785618_0 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 437.0
CMS3_k127_6785618_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 366.0
CMS3_k127_6785618_2 protein domain (DUF2202) - - - 0.0000000000000000000000000000000000000000000000000000000000004229 221.0
CMS3_k127_6785618_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000004098 121.0
CMS3_k127_6785618_4 Cytochrome c - - - 0.000000000000000000000327 99.0
CMS3_k127_6785618_5 Thrombospondin type 3 repeat - - - 0.000000000000000000008116 97.0
CMS3_k127_6789886_0 Predicted membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000001741 129.0
CMS3_k127_6789886_1 - - - - 0.0000000000000000000000000001133 121.0
CMS3_k127_6789886_2 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000024 120.0
CMS3_k127_6822275_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 365.0
CMS3_k127_6822275_1 Transposase - - - 0.00000000000000000000000000000000001195 138.0
CMS3_k127_6827267_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1184.0
CMS3_k127_6827267_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 505.0
CMS3_k127_6827267_10 Short C-terminal domain K08982 - - 0.0000000000000000000007301 96.0
CMS3_k127_6827267_11 Cytochrome c - - - 0.00000000000000000000376 96.0
CMS3_k127_6827267_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 496.0
CMS3_k127_6827267_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 385.0
CMS3_k127_6827267_4 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 368.0
CMS3_k127_6827267_5 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 360.0
CMS3_k127_6827267_6 Alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 342.0
CMS3_k127_6827267_7 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000001262 220.0
CMS3_k127_6827267_8 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000001047 214.0
CMS3_k127_6827267_9 Cytochrome c - - - 0.000000000000000000000000000004233 123.0
CMS3_k127_6828563_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003752 277.0
CMS3_k127_6828563_2 transposition K07497 - - 0.0000000000002075 83.0
CMS3_k127_6828563_3 - - - - 0.0000000000008904 72.0
CMS3_k127_6828563_4 DDE superfamily endonuclease - - - 0.00002848 47.0
CMS3_k127_6830824_0 transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001609 245.0
CMS3_k127_6831013_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 5.231e-203 638.0
CMS3_k127_6832931_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1704.0
CMS3_k127_6832931_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1010.0
CMS3_k127_6832931_10 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 595.0
CMS3_k127_6832931_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 591.0
CMS3_k127_6832931_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 484.0
CMS3_k127_6832931_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 368.0
CMS3_k127_6832931_14 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 362.0
CMS3_k127_6832931_15 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 353.0
CMS3_k127_6832931_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 316.0
CMS3_k127_6832931_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 287.0
CMS3_k127_6832931_18 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000915 286.0
CMS3_k127_6832931_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001123 274.0
CMS3_k127_6832931_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 7.525e-318 994.0
CMS3_k127_6832931_20 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000003302 246.0
CMS3_k127_6832931_21 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000001442 235.0
CMS3_k127_6832931_22 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000003025 228.0
CMS3_k127_6832931_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000001151 200.0
CMS3_k127_6832931_24 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000002237 192.0
CMS3_k127_6832931_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000001124 164.0
CMS3_k127_6832931_26 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000105 149.0
CMS3_k127_6832931_27 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000001442 150.0
CMS3_k127_6832931_28 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000001836 134.0
CMS3_k127_6832931_29 Protein of unknown function (DUF2818) - - - 0.0000000000000000000000000000002815 125.0
CMS3_k127_6832931_3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341,K05559 - 1.6.5.3 2.19e-283 884.0
CMS3_k127_6832931_30 Preprotein translocase subunit SecG K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000001542 107.0
CMS3_k127_6832931_31 CRS1_YhbY K07574 - - 0.000000000000000000000003729 106.0
CMS3_k127_6832931_32 Domain of unknown function (DUF4149) - - - 0.00000000000000000000004613 107.0
CMS3_k127_6832931_33 - - - - 0.00000000199 63.0
CMS3_k127_6832931_4 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.823e-263 833.0
CMS3_k127_6832931_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.598e-244 757.0
CMS3_k127_6832931_6 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 7.519e-239 747.0
CMS3_k127_6832931_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.269e-230 717.0
CMS3_k127_6832931_8 Participates in both transcription termination and antitermination K02600 - - 1.092e-222 700.0
CMS3_k127_6832931_9 carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006139,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 1.093e-194 612.0
CMS3_k127_6834568_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1180.0
CMS3_k127_6834568_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.0 1074.0
CMS3_k127_6834568_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 514.0
CMS3_k127_6834568_11 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 496.0
CMS3_k127_6834568_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 452.0
CMS3_k127_6834568_13 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 449.0
CMS3_k127_6834568_14 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 440.0
CMS3_k127_6834568_15 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 414.0
CMS3_k127_6834568_16 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 349.0
CMS3_k127_6834568_17 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 338.0
CMS3_k127_6834568_18 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 342.0
CMS3_k127_6834568_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 333.0
CMS3_k127_6834568_2 GTP-binding protein TypA K06207 - - 4.376e-300 930.0
CMS3_k127_6834568_20 Transcriptional regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 315.0
CMS3_k127_6834568_21 KR domain K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 315.0
CMS3_k127_6834568_22 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 301.0
CMS3_k127_6834568_23 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 289.0
CMS3_k127_6834568_24 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 293.0
CMS3_k127_6834568_25 PFAM NADH Ubiquinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000557 276.0
CMS3_k127_6834568_26 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000006263 227.0
CMS3_k127_6834568_27 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000000000000003639 214.0
CMS3_k127_6834568_28 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000000000000007467 205.0
CMS3_k127_6834568_29 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000001799 208.0
CMS3_k127_6834568_3 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 5.676e-287 894.0
CMS3_k127_6834568_30 - - - - 0.00000000000000000000000000000000000000000000000000003937 194.0
CMS3_k127_6834568_31 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000003513 188.0
CMS3_k127_6834568_32 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000003313 175.0
CMS3_k127_6834568_34 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000001824 170.0
CMS3_k127_6834568_35 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000000001963 169.0
CMS3_k127_6834568_36 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000006124 173.0
CMS3_k127_6834568_37 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000001793 167.0
CMS3_k127_6834568_38 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000008588 139.0
CMS3_k127_6834568_39 - - - - 0.0000000000000000000000000000000003493 138.0
CMS3_k127_6834568_4 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 6.147e-269 832.0
CMS3_k127_6834568_40 PFAM FixH - - - 0.00000000000000000000000000000000477 136.0
CMS3_k127_6834568_41 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000000000000000004776 123.0
CMS3_k127_6834568_42 XRE family transcriptional regulator - - - 0.00000000000000000000000000004711 117.0
CMS3_k127_6834568_43 organic phosphonate transport K02044 - - 0.000000000000000000000000003654 122.0
CMS3_k127_6834568_44 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000003961 103.0
CMS3_k127_6834568_45 luxR family - - - 0.0000000000000000000006242 103.0
CMS3_k127_6834568_46 Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000000000000002035 90.0
CMS3_k127_6834568_47 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000889 87.0
CMS3_k127_6834568_48 ERAD pathway - - - 0.000000000000000002031 91.0
CMS3_k127_6834568_49 PFAM cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000003262 81.0
CMS3_k127_6834568_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 4.308e-254 797.0
CMS3_k127_6834568_50 PFAM Integrase - - - 0.000000000003416 68.0
CMS3_k127_6834568_6 PFAM NADH Ubiquinone plastoquinone K12141 - - 4.219e-252 784.0
CMS3_k127_6834568_7 NADH dehydrogenase - - - 1.738e-203 656.0
CMS3_k127_6834568_8 TIGRFAM cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 608.0
CMS3_k127_6834568_9 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 587.0
CMS3_k127_6839137_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1844.0
CMS3_k127_6839137_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1499.0
CMS3_k127_6839137_10 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 561.0
CMS3_k127_6839137_11 Synthesizes selenophosphate from selenide and ATP K01008 GO:0000287,GO:0001887,GO:0003674,GO:0003824,GO:0004756,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009451,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019752,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0070329,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 518.0
CMS3_k127_6839137_12 DoxX-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 516.0
CMS3_k127_6839137_13 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 477.0
CMS3_k127_6839137_14 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 445.0
CMS3_k127_6839137_15 Aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 426.0
CMS3_k127_6839137_16 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 GO:0001887,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016785,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043828,GO:0044237,GO:0044238,GO:0046483,GO:0070329,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 403.0
CMS3_k127_6839137_17 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 367.0
CMS3_k127_6839137_18 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 370.0
CMS3_k127_6839137_19 Protein of unknown function (DUF2797) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 356.0
CMS3_k127_6839137_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1420.0
CMS3_k127_6839137_20 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 312.0
CMS3_k127_6839137_21 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 307.0
CMS3_k127_6839137_22 COG1943 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 299.0
CMS3_k127_6839137_23 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 304.0
CMS3_k127_6839137_24 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001486 276.0
CMS3_k127_6839137_25 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003751 276.0
CMS3_k127_6839137_26 Permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000718 264.0
CMS3_k127_6839137_27 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000164 258.0
CMS3_k127_6839137_28 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002449 250.0
CMS3_k127_6839137_29 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000002255 212.0
CMS3_k127_6839137_3 SMART Resolvase, RNase H domain protein fold K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0 1052.0
CMS3_k127_6839137_30 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000003233 210.0
CMS3_k127_6839137_31 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000009962 198.0
CMS3_k127_6839137_32 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.00000000000000000000000000000000000000000000000000000195 204.0
CMS3_k127_6839137_34 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000001627 177.0
CMS3_k127_6839137_35 Domain of unknown function (DUF4166) - - - 0.0000000000000000000000000000000000000000000001815 175.0
CMS3_k127_6839137_36 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000002172 165.0
CMS3_k127_6839137_37 DNA polymerase III, chi subunit K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.0000000000000000000000000000000000000000426 155.0
CMS3_k127_6839137_38 PFAM Pentapeptide - - - 0.000000000000000000000000000000000002188 147.0
CMS3_k127_6839137_39 pfam rdd - - - 0.000000000000000000000000000000000006603 142.0
CMS3_k127_6839137_4 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06020 GO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 3.6.3.25 2.23e-307 947.0
CMS3_k127_6839137_40 oxidoreductase activity, acting on diphenols and related substances as donors K00411 - 1.10.2.2 0.00000000000000000000000000003768 124.0
CMS3_k127_6839137_41 YcgL domain K09902 - - 0.000000000000000000000468 97.0
CMS3_k127_6839137_42 Transcriptional regulator - - - 0.00000000000001605 76.0
CMS3_k127_6839137_5 Belongs to the 5'-nucleotidase family K17224 - - 1.512e-304 942.0
CMS3_k127_6839137_6 Belongs to the peptidase S16 family - - - 3.072e-303 949.0
CMS3_k127_6839137_7 - - - - 5.553e-224 700.0
CMS3_k127_6839137_8 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 606.0
CMS3_k127_6839137_9 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 601.0
CMS3_k127_6847198_0 Y_Y_Y domain - - - 0.000000000008688 76.0
CMS3_k127_6886249_0 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000000001958 192.0
CMS3_k127_6886249_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000002104 193.0
CMS3_k127_6886249_2 - - - - 0.0000000000000000000000000000000000000000000000000001704 198.0
CMS3_k127_6890788_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1414.0
CMS3_k127_6890788_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 6.239e-223 704.0
CMS3_k127_6890788_10 PFAM Type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 377.0
CMS3_k127_6890788_11 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 308.0
CMS3_k127_6890788_12 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 308.0
CMS3_k127_6890788_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003046 276.0
CMS3_k127_6890788_14 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000002443 248.0
CMS3_k127_6890788_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000002648 241.0
CMS3_k127_6890788_16 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006345 250.0
CMS3_k127_6890788_17 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008823 235.0
CMS3_k127_6890788_18 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000009271 223.0
CMS3_k127_6890788_19 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000000000000000000000000006877 193.0
CMS3_k127_6890788_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481,K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 544.0
CMS3_k127_6890788_20 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000000000000000214 190.0
CMS3_k127_6890788_21 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.0000000000000000000000000000000000000000000000000004456 199.0
CMS3_k127_6890788_22 Type II secretion system (T2SS), protein J - - - 0.00000000000000000000000000000000000000000003785 169.0
CMS3_k127_6890788_23 type II secretion system protein N K02463 - - 0.00000000000000000000000000000000000265 148.0
CMS3_k127_6890788_24 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000000000000000000000002357 119.0
CMS3_k127_6890788_25 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000005746 110.0
CMS3_k127_6890788_26 general secretion pathway protein h K02457 - - 0.000000000000000001373 93.0
CMS3_k127_6890788_27 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000229 68.0
CMS3_k127_6890788_29 - K06950 - - 0.00000000001785 68.0
CMS3_k127_6890788_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009499 514.0
CMS3_k127_6890788_4 General secretion pathway protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 510.0
CMS3_k127_6890788_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 467.0
CMS3_k127_6890788_6 AIR synthase related protein, N-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 464.0
CMS3_k127_6890788_7 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 419.0
CMS3_k127_6890788_8 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 405.0
CMS3_k127_6890788_9 Histidine kinase K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 405.0
CMS3_k127_6891789_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.657e-277 861.0
CMS3_k127_6891789_1 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 1.177e-238 754.0
CMS3_k127_6891789_10 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000001055 218.0
CMS3_k127_6891789_11 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000001016 207.0
CMS3_k127_6891789_12 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000689 178.0
CMS3_k127_6891789_13 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000007724 164.0
CMS3_k127_6891789_14 COG1393 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000001651 155.0
CMS3_k127_6891789_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18901 - - 0.00000000000000000000000000000000000000003456 161.0
CMS3_k127_6891789_16 protein conserved in bacteria K09938 - - 0.0000000000000000000000000000000000000001098 165.0
CMS3_k127_6891789_17 Rhomboid family - - - 0.000000000000000000000000000000000000002991 154.0
CMS3_k127_6891789_18 LysM domain - - - 0.0000000000000000000000000000000001506 140.0
CMS3_k127_6891789_19 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000008366 111.0
CMS3_k127_6891789_2 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 565.0
CMS3_k127_6891789_20 acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000009514 101.0
CMS3_k127_6891789_3 AIR synthase related protein, N-terminal domain K01933 GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 515.0
CMS3_k127_6891789_4 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 370.0
CMS3_k127_6891789_5 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 314.0
CMS3_k127_6891789_6 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 302.0
CMS3_k127_6891789_7 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000002112 267.0
CMS3_k127_6891789_8 Belongs to the DnaA family. HdA subfamily K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000009887 252.0
CMS3_k127_6891789_9 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000005679 221.0
CMS3_k127_6899658_0 leucine-zipper of insertion element IS481 K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 610.0
CMS3_k127_6899658_1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.00000000005041 63.0
CMS3_k127_6935236_0 PFAM von Willebrand factor type A - - - 0.0 1114.0
CMS3_k127_6935236_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 GO:0000302,GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009635,GO:0009636,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016740,GO:0016744,GO:0019219,GO:0019222,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0019842,GO:0030145,GO:0030976,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0035690,GO:0036094,GO:0036245,GO:0042221,GO:0042493,GO:0042542,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0046496,GO:0046677,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051171,GO:0051173,GO:0051186,GO:0051252,GO:0051254,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070301,GO:0070887,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0072524,GO:0072747,GO:0072756,GO:0080090,GO:0097159,GO:0097237,GO:1901135,GO:1901322,GO:1901360,GO:1901363,GO:1901562,GO:1901564,GO:1901654,GO:1901655,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.2.1.1 0.0 1097.0
CMS3_k127_6935236_10 chemotaxis protein K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 595.0
CMS3_k127_6935236_11 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 548.0
CMS3_k127_6935236_12 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 532.0
CMS3_k127_6935236_13 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 490.0
CMS3_k127_6935236_14 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 471.0
CMS3_k127_6935236_15 Belongs to the prokaryotic GSH synthase family K01920 GO:0000287,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 453.0
CMS3_k127_6935236_16 Oxidoreductase FAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 418.0
CMS3_k127_6935236_17 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 403.0
CMS3_k127_6935236_18 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 398.0
CMS3_k127_6935236_19 PFAM methyltransferase small - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 312.0
CMS3_k127_6935236_2 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 8.803e-312 1027.0
CMS3_k127_6935236_20 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000001861 248.0
CMS3_k127_6935236_21 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000002458 231.0
CMS3_k127_6935236_22 tonb protein K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000001172 234.0
CMS3_k127_6935236_23 phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000001505 227.0
CMS3_k127_6935236_24 response regulator K02657 - - 0.000000000000000000000000000000000000000000000000000000000000002552 220.0
CMS3_k127_6935236_25 response regulator receiver K02658 - - 0.00000000000000000000000000000000000000000000000001273 182.0
CMS3_k127_6935236_26 Chemotaxis signal transduction protein K02659 - - 0.00000000000000000000000000000000000000001454 159.0
CMS3_k127_6935236_27 COG2863 Cytochrome c553 - - - 0.0000000000000000000000000000000000000000167 161.0
CMS3_k127_6935236_28 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000002061 156.0
CMS3_k127_6935236_29 Cytochrome c, class I - - - 0.00000000000000000000000000000000000000004555 156.0
CMS3_k127_6935236_3 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601 - 4.1.1.39 3.449e-294 904.0
CMS3_k127_6935236_30 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000004158 143.0
CMS3_k127_6935236_31 CheW domain protein K06598 - - 0.000000000000000167 86.0
CMS3_k127_6935236_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 7.255e-255 789.0
CMS3_k127_6935236_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.755e-219 689.0
CMS3_k127_6935236_6 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 1.42e-218 683.0
CMS3_k127_6935236_7 COG0191 Fructose tagatose bisphosphate aldolase K01624 - 4.1.2.13 2.863e-204 638.0
CMS3_k127_6935236_8 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.858e-204 641.0
CMS3_k127_6935236_9 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.489e-201 630.0
CMS3_k127_6940427_0 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000002672 132.0
CMS3_k127_6940427_1 - - - - 0.00000000000000003745 81.0
CMS3_k127_6940427_2 - - - - 0.000000000002058 74.0
CMS3_k127_6963824_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002587 252.0
CMS3_k127_6967825_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.407e-298 929.0
CMS3_k127_6967825_1 Bacterial protein of unknown function (DUF839) K07093 - - 2.826e-197 630.0
CMS3_k127_6967825_10 MerR HTH family regulatory protein K18997 - - 0.0000000000000000000005945 99.0
CMS3_k127_6967825_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 607.0
CMS3_k127_6967825_3 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 377.0
CMS3_k127_6967825_4 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 274.0
CMS3_k127_6967825_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001214 261.0
CMS3_k127_6967825_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
CMS3_k127_6967825_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000007769 114.0
CMS3_k127_6967825_8 Belongs to the frataxin family K06202 - - 0.000000000000000000000000001587 126.0
CMS3_k127_7011199_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1228.0
CMS3_k127_7011199_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00615,K00616 - 2.2.1.1,2.2.1.2 0.0 1168.0
CMS3_k127_7011199_10 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 518.0
CMS3_k127_7011199_11 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 520.0
CMS3_k127_7011199_12 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 427.0
CMS3_k127_7011199_13 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 398.0
CMS3_k127_7011199_14 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 394.0
CMS3_k127_7011199_15 PFAM Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 342.0
CMS3_k127_7011199_16 PFAM Patatin K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 331.0
CMS3_k127_7011199_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 325.0
CMS3_k127_7011199_18 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 325.0
CMS3_k127_7011199_19 Oxidoreductase NAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 292.0
CMS3_k127_7011199_2 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 9.383e-318 987.0
CMS3_k127_7011199_20 dna ligase K10747 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 294.0
CMS3_k127_7011199_21 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 283.0
CMS3_k127_7011199_22 Nitroreductase K10679 GO:0000166,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018545,GO:0018973,GO:0018974,GO:0019326,GO:0019439,GO:0032553,GO:0036094,GO:0042537,GO:0042802,GO:0043167,GO:0043168,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046256,GO:0046260,GO:0046263,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072490,GO:0072491,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 1.5.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002087 271.0
CMS3_k127_7011199_23 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006687 258.0
CMS3_k127_7011199_24 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002094 256.0
CMS3_k127_7011199_25 deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003197 252.0
CMS3_k127_7011199_26 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001302 249.0
CMS3_k127_7011199_27 Putative peptidoglycan binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003702 249.0
CMS3_k127_7011199_28 Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002658 248.0
CMS3_k127_7011199_29 Responsible for synthesis of pseudouridine from uracil K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
CMS3_k127_7011199_3 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.956e-262 819.0
CMS3_k127_7011199_30 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000001805 234.0
CMS3_k127_7011199_31 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001095 225.0
CMS3_k127_7011199_32 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K00387 - 1.8.3.1 0.0000000000000000000000000000000000000000000000000000000001663 216.0
CMS3_k127_7011199_33 Disulfide bond formation protein DsbB - - - 0.000000000000000000000000000000000000000000000000000000001151 205.0
CMS3_k127_7011199_34 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000003049 211.0
CMS3_k127_7011199_35 TIGRFAM Diguanylate cyclase K13069 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000004288 201.0
CMS3_k127_7011199_36 - - - - 0.0000000000000000000000000000000000000000000000000001294 197.0
CMS3_k127_7011199_37 protein histidine kinase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000002373 197.0
CMS3_k127_7011199_38 protein conserved in bacteria K09912 - - 0.00000000000000000000000000000000000000000000002457 179.0
CMS3_k127_7011199_39 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000001777 163.0
CMS3_k127_7011199_4 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 9.677e-253 794.0
CMS3_k127_7011199_40 NnrU protein - - - 0.00000000000000000000000000000000000000000002885 167.0
CMS3_k127_7011199_41 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000009714 168.0
CMS3_k127_7011199_42 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000001039 157.0
CMS3_k127_7011199_43 OmpA-like transmembrane domain - - - 0.0000000000000000000000000000000000006058 149.0
CMS3_k127_7011199_44 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000002701 135.0
CMS3_k127_7011199_45 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000002706 133.0
CMS3_k127_7011199_46 cold-shock protein K03704 - - 0.0000000000000000000000000000000595 125.0
CMS3_k127_7011199_47 COG1051 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000006835 124.0
CMS3_k127_7011199_48 cold-shock protein K03704 - - 0.000000000000000000000000000000698 124.0
CMS3_k127_7011199_49 - - - - 0.000000000000000000000000000007207 126.0
CMS3_k127_7011199_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 3.048e-222 702.0
CMS3_k127_7011199_50 MarR family - - - 0.0000000000000000000000000000252 122.0
CMS3_k127_7011199_51 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000001155 123.0
CMS3_k127_7011199_52 Domain of Unknown Function (DUF1540) - - - 0.0000000000000000000000000003061 117.0
CMS3_k127_7011199_53 DsrC like protein K11179 - - 0.0000000000000000000000000005512 117.0
CMS3_k127_7011199_54 cheY-homologous receiver domain - - - 0.000000000000000000000000007581 116.0
CMS3_k127_7011199_55 Uncharacterised protein family (UPF0149) K07039 - - 0.00000000000000000000007969 106.0
CMS3_k127_7011199_56 nucleoid-associated protein K06899 - - 0.00000000000000000001143 101.0
CMS3_k127_7011199_58 Domain of unknown function (DUF4389) - - - 0.0000000000000000002211 94.0
CMS3_k127_7011199_59 - - - - 0.0000000000000002255 79.0
CMS3_k127_7011199_6 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 569.0
CMS3_k127_7011199_60 diguanylate cyclase - - - 0.000000000006079 70.0
CMS3_k127_7011199_61 Domain of unknown function (DUF3330) - - - 0.00000000001629 70.0
CMS3_k127_7011199_64 Protein of unknown function (DUF2384) - - - 0.00002238 53.0
CMS3_k127_7011199_7 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 567.0
CMS3_k127_7011199_8 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 548.0
CMS3_k127_7011199_9 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 519.0
CMS3_k127_7011221_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 8.685e-281 876.0
CMS3_k127_7011221_1 4Fe-4S dicluster domain - - - 4.362e-248 775.0
CMS3_k127_7011221_2 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 7.673e-226 704.0
CMS3_k127_7011221_3 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K11181 - 1.8.99.5 7.468e-211 657.0
CMS3_k127_7011221_4 Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 366.0
CMS3_k127_7011221_5 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000004103 235.0
CMS3_k127_7011221_6 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000000003484 195.0
CMS3_k127_7011221_7 Sulfur relay protein TusC DsrF K07236 - - 0.000000000000000000000000000000000000000000000000005676 183.0
CMS3_k127_7011221_8 sulfur relay protein TusB DsrH K07237 - - 0.000000000000000000000000000000000003045 139.0
CMS3_k127_7028223_0 COG3039 Transposase and inactivated derivatives, IS5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 517.0
CMS3_k127_7028223_1 PFAM Integrase, catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 471.0
CMS3_k127_7028223_2 TIGRFAM YD repeat protein - - - 0.000000000000000000000000000000000000000002347 172.0
CMS3_k127_7058722_0 Pfam Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 384.0
CMS3_k127_7058722_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000005643 126.0
CMS3_k127_7058722_2 Belongs to the SUA5 family - - - 0.000000000000000000006638 92.0
CMS3_k127_7087262_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001922 267.0
CMS3_k127_7087262_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000001825 224.0
CMS3_k127_7087262_2 Transcriptional regulator K02623 - - 0.000000000000000000000000000000000000000000000009958 183.0
CMS3_k127_7087262_3 TIGRFAM pentapeptide MXKDX repeat protein - - - 0.0000003704 53.0
CMS3_k127_7128906_0 SPTR A9B8L4 Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 326.0
CMS3_k127_7141073_0 HI0933 family K07007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 567.0
CMS3_k127_7141073_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002117 282.0
CMS3_k127_7141073_2 Protein of unknown function (DUF1415) - - - 0.0000000000000000000000000000000000000000000000000000000000000000006061 233.0
CMS3_k127_7141073_3 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000001535 173.0
CMS3_k127_7141073_4 Glutaredoxin - - - 0.000000000000000000000000000000000000000000004172 168.0
CMS3_k127_7141073_5 MOSC domain - - - 0.00000000000000000000000000000000000000007411 156.0
CMS3_k127_7141073_6 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000003835 57.0
CMS3_k127_7155082_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 377.0
CMS3_k127_7155082_1 YtxH-like protein - - - 0.0002798 45.0
CMS3_k127_7161052_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 539.0
CMS3_k127_7161052_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009064,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 340.0
CMS3_k127_7161052_10 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 GO:0003674,GO:0003824,GO:0004731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016154,GO:0016740,GO:0016757,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000003236 138.0
CMS3_k127_7161052_2 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K03148,K21029 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0061605,GO:0070566,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.73,2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009872 337.0
CMS3_k127_7161052_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 301.0
CMS3_k127_7161052_4 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001548 290.0
CMS3_k127_7161052_5 nitric oxide dioxygenase activity K07140 - - 0.000000000000000000000000000000000000000000001335 168.0
CMS3_k127_7161052_6 - - - - 0.000000000000000000000000000000000000004422 147.0
CMS3_k127_7161052_7 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000006112 149.0
CMS3_k127_7161052_8 SMART Mov34 MPN PAD-1 family protein - - - 0.000000000000000000000000000000000000006768 151.0
CMS3_k127_7161052_9 - - - - 0.00000000000000000000000000000000002452 138.0
CMS3_k127_7168879_0 - - - - 0.0 1756.0
CMS3_k127_7168879_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 590.0
CMS3_k127_7168879_2 competence protein COMEC K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 338.0
CMS3_k127_7168879_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007486 255.0
CMS3_k127_7177777_0 Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006919 255.0
CMS3_k127_7177777_1 symporter activity K03307 - - 0.00000000000000000000000000000000000429 144.0
CMS3_k127_7197755_0 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 1.158e-291 910.0
CMS3_k127_7197755_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 555.0
CMS3_k127_7197755_2 Belongs to the Nudix hydrolase family K01518 - 3.6.1.17 0.00000000000000000000000000000000000000000007115 166.0
CMS3_k127_7197755_3 - - - - 0.0000007406 56.0
CMS3_k127_720522_0 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 326.0
CMS3_k127_7306073_0 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 373.0
CMS3_k127_7306073_1 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001106 280.0
CMS3_k127_7306073_2 Transposase K07494 - - 0.000000000000000000000000007582 123.0
CMS3_k127_7322848_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000008423 220.0
CMS3_k127_7322848_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000421 60.0
CMS3_k127_7324358_0 Transposase DDE domain - - - 0.0000002083 62.0
CMS3_k127_7510071_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 469.0
CMS3_k127_7510071_1 - - - - 0.000000000000000000000000000000002207 144.0
CMS3_k127_7570690_0 PFAM Integrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 335.0
CMS3_k127_7570690_1 LysE type translocator - - - 0.0000000000000000000000000000000000007354 147.0
CMS3_k127_7570690_2 Thioredoxin - - - 0.0000000000000000000007461 102.0
CMS3_k127_7592586_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 351.0
CMS3_k127_7592586_1 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000000000000000000000009147 124.0
CMS3_k127_7592586_2 Helix-turn-helix domain K07726 - - 0.000000000000000000005968 95.0
CMS3_k127_7593592_0 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000003303 241.0
CMS3_k127_7610815_0 Transposase IS66 family K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 476.0
CMS3_k127_7610815_1 metal-dependent hydrolase of the TIM-barrel fold K07046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 366.0
CMS3_k127_7610815_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000007999 82.0
CMS3_k127_7610815_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006282,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000007646 72.0
CMS3_k127_7627409_0 Transposase K00957,K07497 - 2.7.7.4 0.000000000000000000005831 106.0
CMS3_k127_7627409_1 Uncharacterised protein family (UPF0175) - - - 0.000000000000004932 78.0
CMS3_k127_7627409_2 Glycosyl hydrolase family 67 C-terminus K01235 - 3.2.1.139 0.000008385 50.0
CMS3_k127_77846_0 - - - - 0.0000000000000000000000000000000000000000000008852 168.0
CMS3_k127_77846_10 - - - - 0.0000000002485 67.0
CMS3_k127_77846_11 - - - - 0.00000001358 59.0
CMS3_k127_77846_3 - - - - 0.000000000000000000000000000001446 122.0
CMS3_k127_77846_4 - - - - 0.0000000000000000000000009172 103.0
CMS3_k127_77846_6 - - - - 0.0000000000000000001363 88.0
CMS3_k127_77846_7 - - - - 0.000000000000000006742 84.0
CMS3_k127_77846_8 - - - - 0.0000000000000001313 81.0
CMS3_k127_791701_0 Predicted membrane protein (DUF2339) - - - 3.063e-239 769.0
CMS3_k127_791701_1 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 379.0
CMS3_k127_791701_2 Catalyzes the ATP-dependent dehydration of threonylcarbamoyladenosine at position 37 (t(6)A37) to form cyclic t(6)A37 (ct(6)A37) in tRNAs that read codons beginning with adenine. TcdA is also part of a sulfur transfer pathway K22132 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0030955,GO:0031402,GO:0031420,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0061503,GO:0061504,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 331.0
CMS3_k127_791701_3 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007841 291.0
CMS3_k127_791701_4 Belongs to the pseudouridine synthase RsuA family K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001508 278.0
CMS3_k127_80978_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.653e-199 633.0
CMS3_k127_80978_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 461.0
CMS3_k127_832959_0 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 391.0
CMS3_k127_832959_1 PFAM Ion transport K08714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 342.0
CMS3_k127_838951_0 Belongs to the UPF0061 (SELO) family - - - 1.42e-204 646.0
CMS3_k127_838951_1 SseB protein N-terminal domain - - - 0.000000000000000000000000000000000000000009226 157.0
CMS3_k127_838951_2 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.0000000000000000000000000000128 130.0
CMS3_k127_838951_3 GIY-YIG catalytic domain K07461 - - 0.0000000000000000001452 100.0
CMS3_k127_868299_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 336.0
CMS3_k127_868299_1 Short C-terminal domain K08982 - - 0.000000000000000000002722 95.0
CMS3_k127_868299_2 Methyltransferase type 11 - - - 0.0000001901 54.0
CMS3_k127_91896_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1390.0
CMS3_k127_91896_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 452.0
CMS3_k127_91896_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000005139 202.0
CMS3_k127_91896_3 Peptidyl-prolyl cis-trans K03774 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0061077,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000009305 154.0
CMS3_k127_923722_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 2.383e-278 865.0
CMS3_k127_923722_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 GO:0003674,GO:0003824,GO:0004812,GO:0004818,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006424,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.17 1.145e-233 729.0
CMS3_k127_923722_2 Phosphate-starvation-inducible E K13256 - - 0.00000000000000000000000000000000000005726 147.0
CMS3_k127_923722_3 - - - - 0.000000000000000005795 84.0
CMS3_k127_957089_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1124.0
CMS3_k127_957089_1 CoA binding domain - - - 0.0 1123.0
CMS3_k127_957089_10 self proteolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006118 271.0
CMS3_k127_957089_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000209 243.0
CMS3_k127_957089_12 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000002564 232.0
CMS3_k127_957089_13 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000000003713 204.0
CMS3_k127_957089_14 Integrase core domain - - - 0.0000000000000000000000000000000000768 134.0
CMS3_k127_957089_15 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000004873 126.0
CMS3_k127_957089_16 Helix-turn-helix domain K07483 - - 0.000000000000000000000000000007311 121.0
CMS3_k127_957089_17 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000001682 68.0
CMS3_k127_957089_18 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000006455 67.0
CMS3_k127_957089_2 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 3.705e-225 702.0
CMS3_k127_957089_20 Fibronectin type III domain - - - 0.0000000156 66.0
CMS3_k127_957089_22 transposition - - - 0.00007547 49.0
CMS3_k127_957089_3 Na H antiporter - - - 7.586e-198 627.0
CMS3_k127_957089_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 578.0
CMS3_k127_957089_5 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 538.0
CMS3_k127_957089_6 DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 418.0
CMS3_k127_957089_7 histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 402.0
CMS3_k127_957089_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 308.0
CMS3_k127_957089_9 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001182 280.0
CMS3_k127_96097_0 5'-nucleotidase, C-terminal domain K17224 - - 4.28e-261 814.0
CMS3_k127_96097_1 ABC transporter transmembrane region K06148 - - 8.606e-257 807.0
CMS3_k127_96097_11 Nuclease-related domain - - - 0.0000001822 61.0
CMS3_k127_96097_12 - - - - 0.00001963 47.0
CMS3_k127_96097_2 His Kinase A (phosphoacceptor) domain K14986 - 2.7.13.3 1.812e-239 760.0
CMS3_k127_96097_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 411.0
CMS3_k127_96097_4 response regulator receiver K13041 - - 0.0000000000000000000000000000000000000000000000000000000000000000001159 238.0
CMS3_k127_96097_5 phenylacetate-CoA ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000003133 233.0
CMS3_k127_96097_6 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000006112 207.0
CMS3_k127_96097_7 cytochrome c biogenesis protein - - - 0.00000000001074 64.0
CMS3_k127_96097_8 COG3547 Transposase and inactivated derivatives - - - 0.00000000148 63.0
CMS3_k127_96097_9 - - - - 0.000000007852 57.0
CMS3_k127_962698_0 Baseplate J-like protein - - - 1.123e-258 823.0
CMS3_k127_962698_1 Phage late control gene D protein (GPD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 464.0
CMS3_k127_962698_10 - - - - 0.00000000000000000000000000000000000006892 146.0
CMS3_k127_962698_11 TIR domain - - - 0.00000000000000000000000003498 121.0
CMS3_k127_962698_12 Psort location CytoplasmicMembrane, score K12132 - 2.7.11.1 0.00000000000000000002492 105.0
CMS3_k127_962698_13 - - - - 0.0000000000000000001476 92.0
CMS3_k127_962698_14 Peroxidase - - - 0.000000000001505 67.0
CMS3_k127_962698_15 - - - - 0.0000000000159 75.0
CMS3_k127_962698_16 COG1943 Transposase and inactivated derivatives - - - 0.0000000001848 63.0
CMS3_k127_962698_17 HupE / UreJ protein - - - 0.00003602 48.0
CMS3_k127_962698_2 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007352 407.0
CMS3_k127_962698_3 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000001231 218.0
CMS3_k127_962698_4 - - - - 0.00000000000000000000000000000000000000000000000000000000008189 213.0
CMS3_k127_962698_6 PFAM Glycosyl hydrolases family 25 K07273 - - 0.000000000000000000000000000000000000000000000006622 181.0
CMS3_k127_962698_7 Gene 25-like lysozyme K06903 - - 0.00000000000000000000000000000000000000000000001171 175.0
CMS3_k127_962698_8 - - - - 0.0000000000000000000000000000000000000000001785 160.0
CMS3_k127_962698_9 Phage tail protein (Tail_P2_I) - - - 0.000000000000000000000000000000000000000004738 160.0
CMS3_k127_964814_0 Bacterial periplasmic substrate-binding proteins K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 6.39e-201 648.0
CMS3_k127_964814_1 Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000000000000000000000000000000000000000001409 232.0
CMS3_k127_978469_1 transcriptional regulator - - - 0.0000000000000000000003931 101.0