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Overview

ID MAG00523
Name CMS3_bin.28
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Aggregatilineales
Family
Genus
Species
Assembly information
Completeness (%) 78.13
Contamination (%) 4.5
GC content (%) 57.0
N50 (bp) 2,567
Genome size (bp) 3,438,249

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3451

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1009924_0 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006254 250.0
CMS3_k127_1009924_1 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003915 221.0
CMS3_k127_1009924_2 PFAM aspartate glutamate uridylate kinase K06981 - 2.7.4.26 0.00000000000000000000000000000000000000000009217 166.0
CMS3_k127_1011133_0 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008922 544.0
CMS3_k127_1011133_1 CobQ CobB MinD ParA nucleotide binding domain K08253,K16554,K16692 - 2.7.10.2 0.0000000000000000000000002375 108.0
CMS3_k127_1012692_0 Sulfate permease family K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 374.0
CMS3_k127_101447_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 0.000000000000000000000001435 113.0
CMS3_k127_101447_1 Electron transfer DM13 - - - 0.000000000000000000002656 102.0
CMS3_k127_101447_2 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.000005703 54.0
CMS3_k127_101675_0 Heavy-metal-associated domain K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 580.0
CMS3_k127_101675_1 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000001168 152.0
CMS3_k127_1024336_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000004335 96.0
CMS3_k127_1024336_1 Copper resistance protein K07156 - - 0.00000000001739 74.0
CMS3_k127_1027115_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000001974 223.0
CMS3_k127_1027115_1 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000002716 81.0
CMS3_k127_1045706_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002675 255.0
CMS3_k127_1045706_1 PFAM regulatory protein LuxR K03556 - - 0.000000000000000000000000000000000000000000000004673 191.0
CMS3_k127_1045706_2 - - - - 0.000001196 59.0
CMS3_k127_1046030_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 507.0
CMS3_k127_1046030_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000004168 153.0
CMS3_k127_105264_0 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 356.0
CMS3_k127_105264_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 301.0
CMS3_k127_105264_2 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000004098 158.0
CMS3_k127_105264_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0008703 43.0
CMS3_k127_1057189_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 509.0
CMS3_k127_106357_0 ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 260.0
CMS3_k127_106357_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000004449 149.0
CMS3_k127_106357_2 - - - - 0.000000000000000000000000000000002732 138.0
CMS3_k127_1072670_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000007259 243.0
CMS3_k127_1072670_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000005296 191.0
CMS3_k127_1072670_2 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000302 177.0
CMS3_k127_1072670_3 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000006639 123.0
CMS3_k127_1072670_4 antisigma factor binding K04749,K06378 - - 0.000000000002206 71.0
CMS3_k127_1073738_0 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000146 186.0
CMS3_k127_1074974_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 574.0
CMS3_k127_1074974_1 Transmembrane secretion effector K08225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 333.0
CMS3_k127_1074974_2 Soluble NSF attachment protein, SNAP - - - 0.000000000000000000000005529 119.0
CMS3_k127_1074974_3 HEAT repeat-containing protein - - - 0.000000004474 70.0
CMS3_k127_1080551_0 ATP:ADP antiporter activity K15762 - - 0.0000000000000000000000000000000000000002141 172.0
CMS3_k127_1082099_0 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000001292 179.0
CMS3_k127_1086065_0 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000002942 212.0
CMS3_k127_1086065_1 iron-sulfur cluster assembly - - - 0.000000000000000000000002083 105.0
CMS3_k127_1086065_2 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00005183 54.0
CMS3_k127_1086200_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 1.02e-202 649.0
CMS3_k127_1086200_1 V-type ATPase 116kDa subunit family K02123 - - 0.00000000000000000000000000000000004865 137.0
CMS3_k127_1086200_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000001055 104.0
CMS3_k127_1086200_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.00000000000000003963 93.0
CMS3_k127_1086200_4 ATP synthase, subunit C K02124 - - 0.000000000000002961 77.0
CMS3_k127_1086200_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.000001099 55.0
CMS3_k127_1086200_6 to Saccharomyces cerevisiae VMA4 (YOR332W) K02150 GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0032991,GO:0033176,GO:0033178,GO:0033180,GO:0034220,GO:0036442,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045851,GO:0046961,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1902600 - 0.0001903 51.0
CMS3_k127_1086435_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 1.636e-251 786.0
CMS3_k127_1086435_1 N-Acetylmuramoyl-L-alanine amidase - - - 0.000000006651 68.0
CMS3_k127_1090074_0 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 312.0
CMS3_k127_1090074_1 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.000000000000000000004604 102.0
CMS3_k127_1091111_0 PFAM binding-protein-dependent transport systems inner membrane component K02054,K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 427.0
CMS3_k127_1091111_1 ABC transporter permease K02053 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 362.0
CMS3_k127_1091111_2 Belongs to the ABC transporter superfamily K02052 - - 0.0000000000000000000000000000000000000000000000009812 178.0
CMS3_k127_1092506_0 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000000004623 123.0
CMS3_k127_1092506_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000005155 106.0
CMS3_k127_1109414_0 - - - - 0.0000000000000000002403 99.0
CMS3_k127_112167_0 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006993 245.0
CMS3_k127_112167_1 Serine threonine protein kinase - - - 0.000000000000000000000000000000000003074 146.0
CMS3_k127_112167_2 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000005543 93.0
CMS3_k127_1124006_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 389.0
CMS3_k127_1124006_1 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
CMS3_k127_1124006_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000009996 121.0
CMS3_k127_1128367_0 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000005886 145.0
CMS3_k127_1128367_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000007122 94.0
CMS3_k127_1132452_0 Methyltransferase domain - - - 0.000000000000001395 78.0
CMS3_k127_1132452_1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000001734 63.0
CMS3_k127_1133537_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001449 211.0
CMS3_k127_1134143_0 sh3 domain protein - - - 0.0000000000000000000000000000000000000417 162.0
CMS3_k127_1138729_0 Reverse transcriptase-like K03469 - 3.1.26.4 0.00000000000000000000002447 106.0
CMS3_k127_1138729_1 - - - - 0.000000000000000000001169 101.0
CMS3_k127_1140875_0 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 564.0
CMS3_k127_1140875_1 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 530.0
CMS3_k127_1140875_2 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 379.0
CMS3_k127_1140875_3 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 348.0
CMS3_k127_1140875_4 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 327.0
CMS3_k127_1142529_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 313.0
CMS3_k127_1142529_1 COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000002652 199.0
CMS3_k127_1142529_2 [2Fe-2S] binding domain K03518,K16879 - 1.2.5.3,1.3.99.8 0.00000000000000000000000000000000000000000000000001915 184.0
CMS3_k127_1145502_0 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 292.0
CMS3_k127_1148716_0 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000000000000000000000193 199.0
CMS3_k127_1157684_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
CMS3_k127_1157684_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000009877 108.0
CMS3_k127_1159780_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 377.0
CMS3_k127_1159780_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000008174 201.0
CMS3_k127_1159780_2 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000002131 116.0
CMS3_k127_1165360_0 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000009285 182.0
CMS3_k127_1165360_1 - - - - 0.0000000000000000003015 91.0
CMS3_k127_1165360_2 PFAM Major Facilitator Superfamily - - - 0.00000000000004554 78.0
CMS3_k127_1168739_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 256.0
CMS3_k127_1172164_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000316 276.0
CMS3_k127_1172164_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000002206 147.0
CMS3_k127_1172164_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000003342 127.0
CMS3_k127_1172164_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000007957 69.0
CMS3_k127_1176276_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 4.021e-194 615.0
CMS3_k127_1176276_1 Cold shock protein domain K03704 - - 0.000000000000001908 78.0
CMS3_k127_1196163_0 COG1651 Protein-disulfide isomerase K21990 - - 0.0000000000000000000000000000000000000000000000009137 185.0
CMS3_k127_1196163_1 heme binding - - - 0.000000000000005276 80.0
CMS3_k127_1199756_0 PFAM AMP-dependent synthetase and ligase K01897,K02182,K22319 - 6.1.3.1,6.2.1.3,6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 467.0
CMS3_k127_1204123_0 proline dipeptidase activity - - - 6.12e-197 621.0
CMS3_k127_1204123_1 2 iron, 2 sulfur cluster binding K03518,K07302 - 1.2.5.3,1.3.99.16 0.00000000000000000002453 91.0
CMS3_k127_1209044_0 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007513 546.0
CMS3_k127_1209044_1 ATP:ADP antiporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 319.0
CMS3_k127_1209044_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000004188 176.0
CMS3_k127_1209044_3 acetyltransferase K03789 - 2.3.1.128 0.0000000000003856 76.0
CMS3_k127_1216009_0 TIGRFAM threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 453.0
CMS3_k127_1216009_1 Glycosyltransferase K20534 - - 0.000000000000000000000000000000000000000003532 157.0
CMS3_k127_1216009_2 PFAM Basic membrane lipoprotein K02058 - - 0.0000000000000000001575 89.0
CMS3_k127_1218161_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005757 280.0
CMS3_k127_1218161_1 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000004407 140.0
CMS3_k127_1218161_2 Putative zinc-finger - GO:0005575,GO:0016020 - 0.00008546 51.0
CMS3_k127_1220864_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000005135 236.0
CMS3_k127_1220864_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000005008 146.0
CMS3_k127_1225223_0 SMART PAS domain containing protein - - - 0.000000000000000000355 91.0
CMS3_k127_122528_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 564.0
CMS3_k127_122528_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 465.0
CMS3_k127_122528_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000001277 176.0
CMS3_k127_122528_3 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000001029 167.0
CMS3_k127_122528_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000004176 154.0
CMS3_k127_122528_5 FR47-like protein - - - 0.000000000000000001135 92.0
CMS3_k127_1235873_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 576.0
CMS3_k127_1235873_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000485 188.0
CMS3_k127_1245761_0 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000004761 238.0
CMS3_k127_1245761_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000001223 96.0
CMS3_k127_1252502_0 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000001233 207.0
CMS3_k127_1252502_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000004401 112.0
CMS3_k127_1252563_0 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000002362 151.0
CMS3_k127_1252563_1 Transcriptional regulator - - - 0.0000003305 61.0
CMS3_k127_1252563_2 PFAM Beta-lactamase - - - 0.000002056 53.0
CMS3_k127_1258999_0 CpXC protein - - - 0.0000000000000000000000000000000000002687 153.0
CMS3_k127_1258999_1 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000004904 51.0
CMS3_k127_1260812_0 PFAM ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000158 247.0
CMS3_k127_1260812_1 Alpha/beta hydrolase family - - - 0.0000000000002467 70.0
CMS3_k127_1262350_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.422e-207 666.0
CMS3_k127_1263248_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 295.0
CMS3_k127_1263248_1 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000005834 91.0
CMS3_k127_1266844_0 Selenocysteine-specific translation elongation factor K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 602.0
CMS3_k127_1266844_1 peptidase - - - 0.00000000000000003862 89.0
CMS3_k127_1270409_0 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003222 278.0
CMS3_k127_1270409_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000021 148.0
CMS3_k127_1271920_0 PFAM Alpha beta hydrolase fold-3 domain protein K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000004873 242.0
CMS3_k127_1271920_1 Angio-associated migratory cell K14818 - - 0.0009013 51.0
CMS3_k127_1272441_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000008758 248.0
CMS3_k127_1272441_1 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000009263 188.0
CMS3_k127_1272441_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000007953 123.0
CMS3_k127_1272441_3 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000001835 95.0
CMS3_k127_1272441_4 - K02275,K17686 - 1.9.3.1,3.6.3.54 0.0000000000000004054 92.0
CMS3_k127_1272441_5 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000002161 57.0
CMS3_k127_1272441_6 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.00000007708 65.0
CMS3_k127_1293751_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000006363 231.0
CMS3_k127_1293751_1 NB-ARC domain - - - 0.00000000000000000000000000000000001398 153.0
CMS3_k127_1293751_2 Rhomboid family - - - 0.000000001071 61.0
CMS3_k127_1296179_0 PFAM Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 287.0
CMS3_k127_1296179_1 SnoaL-like polyketide cyclase - - - 0.00000000000000669 78.0
CMS3_k127_1297856_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 297.0
CMS3_k127_1297856_1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000002101 98.0
CMS3_k127_1297856_2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000946 44.0
CMS3_k127_1300019_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000281 209.0
CMS3_k127_1300019_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000005042 94.0
CMS3_k127_1303828_0 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 347.0
CMS3_k127_1303828_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000208 232.0
CMS3_k127_1303828_2 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000001237 126.0
CMS3_k127_1303828_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000004123 74.0
CMS3_k127_1303828_4 PFAM ABC transporter K01990 - - 0.0008007 44.0
CMS3_k127_130636_0 Leucyl aminopeptidase (Aminopeptidase T) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 323.0
CMS3_k127_130636_1 PFAM VanZ like family - - - 0.000000000000000002451 89.0
CMS3_k127_130636_2 Transcriptional regulator, Crp Fnr family K10914 - - 0.00000000000000005939 89.0
CMS3_k127_130849_0 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 353.0
CMS3_k127_130849_2 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000001739 159.0
CMS3_k127_130849_3 Putative bacterial sensory transduction regulator - - - 0.000000000205 67.0
CMS3_k127_1310623_0 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 404.0
CMS3_k127_1320568_0 Phage capsid family - - - 0.000000000000000000000000000104 131.0
CMS3_k127_1320568_1 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044249,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 2.4.1.250 0.000000000001454 79.0
CMS3_k127_1323907_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000007689 194.0
CMS3_k127_1323907_1 Histidine kinase - - - 0.000000000000936 82.0
CMS3_k127_1327708_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 353.0
CMS3_k127_1327708_1 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000009478 205.0
CMS3_k127_1327708_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000055 154.0
CMS3_k127_1327708_3 peptidase - - - 0.000000001135 67.0
CMS3_k127_1330279_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 342.0
CMS3_k127_1330279_2 Argininosuccinate lyase C-terminal K01755 GO:0000050,GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000007653 50.0
CMS3_k127_1332082_0 Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 405.0
CMS3_k127_1332082_1 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000003173 102.0
CMS3_k127_1337088_0 SMART zinc finger, RanBP2-type - - - 0.00004554 52.0
CMS3_k127_1340631_0 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 548.0
CMS3_k127_1340631_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088,K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001505 283.0
CMS3_k127_1340631_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000005076 51.0
CMS3_k127_1342910_0 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000001112 153.0
CMS3_k127_1342910_1 adenylyl cyclase CyaB K05873 - 4.6.1.1 0.0000004941 56.0
CMS3_k127_1342910_2 lyzozyme M1 K07273 - - 0.000002843 59.0
CMS3_k127_134496_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000005358 169.0
CMS3_k127_1345678_0 PFAM LmbE family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000259 267.0
CMS3_k127_1345678_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000003671 205.0
CMS3_k127_1345678_2 CHASE3 domain - - - 0.000000000000000000000000000000000000000000004812 179.0
CMS3_k127_1345678_3 Pirin - - - 0.00000000000000000000001604 110.0
CMS3_k127_1345678_4 Histidine kinase - - - 0.0000000000000002649 83.0
CMS3_k127_1345678_5 transferase activity, transferring alkyl or aryl (other than methyl) groups - - - 0.0000000000000579 83.0
CMS3_k127_1345678_6 - - - - 0.00000000000229 68.0
CMS3_k127_1345678_7 - - - - 0.00001574 49.0
CMS3_k127_135140_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000003136 215.0
CMS3_k127_135140_1 PFAM transglutaminase domain protein - - - 0.00001119 52.0
CMS3_k127_1352884_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 414.0
CMS3_k127_1352884_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.0000000000000000000000000000000000000000000001178 173.0
CMS3_k127_1356976_0 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 294.0
CMS3_k127_1356976_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000001285 173.0
CMS3_k127_1356976_2 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.00000000000000000000000000004835 124.0
CMS3_k127_1356976_3 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000006645 70.0
CMS3_k127_135821_0 PFAM molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009434 252.0
CMS3_k127_135821_1 PFAM cyclic nucleotide-binding - - - 0.00000000000003212 79.0
CMS3_k127_1365660_0 hydrolase (metallo-beta-lactamase superfamily) K02238 - - 0.00000000000000001069 93.0
CMS3_k127_1365660_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.0000000000000008844 82.0
CMS3_k127_1365660_3 Forkhead associated domain - - - 0.0000001768 60.0
CMS3_k127_1366639_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 304.0
CMS3_k127_1366639_1 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.000000000000000000000001185 116.0
CMS3_k127_1384302_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 549.0
CMS3_k127_1384302_1 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 362.0
CMS3_k127_1384302_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000006884 233.0
CMS3_k127_1384302_3 SnoaL-like polyketide cyclase K15945 - - 0.0000000000000000000000000000001311 129.0
CMS3_k127_1384302_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000005403 99.0
CMS3_k127_1388786_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.493e-248 779.0
CMS3_k127_1395289_0 Membrane - - - 0.000000000000000000000000000001044 136.0
CMS3_k127_1400864_0 ATP:ADP antiporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 304.0
CMS3_k127_1400864_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003383 277.0
CMS3_k127_1401591_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336,K05299 - 1.17.1.10,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 356.0
CMS3_k127_1401591_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 301.0
CMS3_k127_1401591_2 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006983 277.0
CMS3_k127_1401591_3 TIGRFAM formate dehydrogenase, alpha subunit K00123,K05299,K22341 - 1.17.1.10,1.17.1.11,1.17.1.9 0.00000000000000000000000000000006293 126.0
CMS3_k127_1401591_4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000007968 130.0
CMS3_k127_1401591_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.0000000000000000000000000000002862 128.0
CMS3_k127_1401591_6 N-terminal half of MaoC dehydratase K17865 - 4.2.1.55 0.000000000000000000000000243 115.0
CMS3_k127_1401591_7 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.00000000000000000008078 97.0
CMS3_k127_1401591_8 blue (type 1) copper K00368 - 1.7.2.1 0.0000000000001221 78.0
CMS3_k127_141535_0 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003857 271.0
CMS3_k127_141535_1 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000802 185.0
CMS3_k127_141535_2 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000001853 124.0
CMS3_k127_141535_3 PFAM Glycosyl transferase family 2 - - - 0.000000000001224 72.0
CMS3_k127_1416943_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 351.0
CMS3_k127_1416943_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 327.0
CMS3_k127_1416943_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000004087 211.0
CMS3_k127_1416943_4 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000002733 185.0
CMS3_k127_1432972_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000009402 126.0
CMS3_k127_1432972_1 spore germination - - - 0.0000000000000000000000000007749 124.0
CMS3_k127_1450617_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 606.0
CMS3_k127_1450617_1 Radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 400.0
CMS3_k127_1450617_2 PFAM NAD dependent epimerase dehydratase family K01784,K08678 - 4.1.1.35,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003473 273.0
CMS3_k127_1450617_3 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000002499 230.0
CMS3_k127_1450617_4 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000005069 120.0
CMS3_k127_1450617_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000002159 101.0
CMS3_k127_1455356_0 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000007607 167.0
CMS3_k127_1455356_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000004448 154.0
CMS3_k127_1455389_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000003243 209.0
CMS3_k127_1455389_1 peptidase - - - 0.0000872 50.0
CMS3_k127_1455477_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 364.0
CMS3_k127_1455477_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000127 204.0
CMS3_k127_1459505_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000004277 218.0
CMS3_k127_1459505_1 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000005957 168.0
CMS3_k127_1464544_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 345.0
CMS3_k127_146488_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 2.175e-234 739.0
CMS3_k127_146488_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 420.0
CMS3_k127_146488_2 Aminotransferase class I and II K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 335.0
CMS3_k127_146488_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 311.0
CMS3_k127_146488_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 311.0
CMS3_k127_146488_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001641 231.0
CMS3_k127_146488_6 - - - - 0.00000000000000000000000001189 113.0
CMS3_k127_1468918_0 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000003296 216.0
CMS3_k127_1468918_1 ABC-type transport system involved in multi-copper enzyme maturation, permease K01992 - - 0.0000000000000000000000000000002145 134.0
CMS3_k127_1470783_0 Glycosyltransferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 499.0
CMS3_k127_1470783_1 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000008994 208.0
CMS3_k127_1471983_0 Proline racemase K01777 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016855,GO:0018112,GO:0019752,GO:0036361,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0047661,GO:0050346,GO:0071704,GO:1901564 5.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008636 391.0
CMS3_k127_1471983_1 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008603 266.0
CMS3_k127_1482291_0 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000002339 187.0
CMS3_k127_1482291_1 photoreceptor activity - - - 0.000000000000000000000000000000000000000000125 177.0
CMS3_k127_1482291_2 Membrane - - - 0.000000000000000005134 92.0
CMS3_k127_1482291_3 GAF domain - - - 0.0000006516 51.0
CMS3_k127_1486080_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000015 164.0
CMS3_k127_1486080_1 Two component transcriptional regulator, winged helix family K07670 - - 0.0000000000000000000001855 101.0
CMS3_k127_1491689_0 Dak1_2 K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000336 290.0
CMS3_k127_1491689_1 PFAM Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000006241 188.0
CMS3_k127_1491689_2 Protein conserved in bacteria - - - 0.00000000000000000001877 94.0
CMS3_k127_1491689_3 ribosomal protein L28 K02902 - - 0.00000000000134 71.0
CMS3_k127_1496235_0 glutamate synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002825 312.0
CMS3_k127_1496235_1 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000005326 235.0
CMS3_k127_1496235_2 Glutamate synthase - - - 0.000000000000009225 78.0
CMS3_k127_1496235_3 Bacterial protein of unknown function (DUF922) - - - 0.0000002747 55.0
CMS3_k127_1496334_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 2.735e-237 753.0
CMS3_k127_1496334_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 318.0
CMS3_k127_1496334_2 Anaphase-promoting complex subunit 4 WD40 domain - - - 0.0000000000000000000000000000000000000000001343 168.0
CMS3_k127_1509950_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 8.428e-217 681.0
CMS3_k127_1509950_1 Cell division protein FtsA K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 318.0
CMS3_k127_1509950_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000005366 234.0
CMS3_k127_1509950_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000005898 139.0
CMS3_k127_1511897_0 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.000000000000000000000000000000000002217 154.0
CMS3_k127_1511897_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000001185 93.0
CMS3_k127_1511897_2 TIR domain K12132 - 2.7.11.1 0.0000000005632 72.0
CMS3_k127_1518648_0 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 464.0
CMS3_k127_1525943_0 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000005506 211.0
CMS3_k127_1525943_1 Psort location Cytoplasmic, score - - - 0.00001842 55.0
CMS3_k127_1527489_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000001122 160.0
CMS3_k127_1527489_1 Carboxymuconolactone decarboxylase - - - 0.00000000000000002147 84.0
CMS3_k127_1528678_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00179,K04090 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 539.0
CMS3_k127_1528678_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000004281 222.0
CMS3_k127_1561658_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 3.3e-201 638.0
CMS3_k127_156437_0 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 448.0
CMS3_k127_156437_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000002138 181.0
CMS3_k127_156437_2 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000005398 60.0
CMS3_k127_1565211_0 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 445.0
CMS3_k127_1566992_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000001471 234.0
CMS3_k127_1566992_1 Transposase DDE domain - - - 0.000000000000000000000000000000000000000000001742 173.0
CMS3_k127_1566992_2 Transposase - - - 0.0000000000000000000000000000001162 128.0
CMS3_k127_1590642_0 chromosome segregation - - - 0.0000000000000000000000000001964 119.0
CMS3_k127_1591659_0 phosphate binding protein K02040 - - 0.0000000000000142 78.0
CMS3_k127_1591659_1 - - - - 0.000000002067 70.0
CMS3_k127_1593493_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000002543 228.0
CMS3_k127_1593493_1 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000004719 93.0
CMS3_k127_1595963_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000001649 213.0
CMS3_k127_1595963_1 Response regulator receiver - - - 0.00000000000000000000000000000000000002861 153.0
CMS3_k127_1595963_2 Microcompartments protein - - - 0.00000000000000000000000000002962 124.0
CMS3_k127_1607482_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 407.0
CMS3_k127_1607482_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 381.0
CMS3_k127_1607482_2 Bacterial regulatory proteins, tetR family - - - 0.0000001912 53.0
CMS3_k127_1608670_0 methyltransferase K21459 - 2.1.1.301 0.00000000000000000000000000000000000000000000001797 180.0
CMS3_k127_1608670_1 domain, Protein - - - 0.0000000000005231 77.0
CMS3_k127_1610118_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000261 256.0
CMS3_k127_1610118_1 Major intrinsic protein - - - 0.00000000000000000000000000000000000000000006281 167.0
CMS3_k127_1618567_0 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 328.0
CMS3_k127_1618567_1 methyltransferase K13311,K13326,K21335 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0016999,GO:0017000,GO:0017144,GO:0032259,GO:0042802,GO:0042803,GO:0044237,GO:0044249,GO:0046983 2.1.1.234 0.000000000000000000000000000000000000000000000000000000000000000000002409 242.0
CMS3_k127_1620558_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000005049 240.0
CMS3_k127_1621588_0 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001725 286.0
CMS3_k127_1621649_0 Heavy-metal-associated domain K17686 - 3.6.3.54 9.963e-206 657.0
CMS3_k127_1621649_1 intracellular signal transduction - - - 0.00000000000000001508 95.0
CMS3_k127_1624300_0 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007037 259.0
CMS3_k127_1624300_1 Double zinc ribbon - - - 0.000000000000001229 81.0
CMS3_k127_1625471_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 472.0
CMS3_k127_1625471_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 292.0
CMS3_k127_1625471_3 Methyltransferase K15256 - - 0.00000000000000000000569 94.0
CMS3_k127_162601_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.688e-255 794.0
CMS3_k127_162601_1 PFAM amidohydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 455.0
CMS3_k127_162601_2 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000003064 109.0
CMS3_k127_162601_3 Roadblock LC7 family protein K07131 - - 0.0000001424 58.0
CMS3_k127_1633696_0 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000000000001347 181.0
CMS3_k127_1633696_1 PFAM Forkhead-associated protein - - - 0.0000005979 60.0
CMS3_k127_1636489_0 ABC transporter K06147 - - 0.00000000000005859 83.0
CMS3_k127_1636753_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000001497 185.0
CMS3_k127_1636753_1 GDSL-like Lipase/Acylhydrolase - - - 0.00000000606 68.0
CMS3_k127_1638765_0 Bacterial membrane protein YfhO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001907 278.0
CMS3_k127_1640437_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.568e-201 643.0
CMS3_k127_1640437_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 304.0
CMS3_k127_1640437_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000003054 79.0
CMS3_k127_1647001_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002796 276.0
CMS3_k127_1647001_1 Serine Threonine protein kinase - - - 0.000000000000000000000000000000000000000000000005326 184.0
CMS3_k127_1647001_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000003725 149.0
CMS3_k127_1647001_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000007454 125.0
CMS3_k127_1652033_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002622 260.0
CMS3_k127_1652033_1 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000006733 196.0
CMS3_k127_1652033_2 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000101 92.0
CMS3_k127_1652033_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000003764 85.0
CMS3_k127_1659791_0 PhoQ Sensor - - - 0.000000000000000000000000000000001029 148.0
CMS3_k127_1659791_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000004592 94.0
CMS3_k127_1660118_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 306.0
CMS3_k127_1660118_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000001258 187.0
CMS3_k127_1660118_2 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000008835 106.0
CMS3_k127_1660412_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000001745 140.0
CMS3_k127_1660412_1 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000001531 121.0
CMS3_k127_1660412_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000001335 81.0
CMS3_k127_1664300_0 PFAM glycosyl transferase, family 51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 563.0
CMS3_k127_1669654_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 404.0
CMS3_k127_1669654_1 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000003132 198.0
CMS3_k127_1669654_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000009453 79.0
CMS3_k127_1673789_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000001383 163.0
CMS3_k127_1673789_1 cell envelope-related transcriptional attenuator - - - 0.0000000000000000000000000000000000000000001592 177.0
CMS3_k127_1677972_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000003813 219.0
CMS3_k127_1677972_1 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000007992 224.0
CMS3_k127_1677972_2 PFAM Forkhead-associated protein - - - 0.00000006094 62.0
CMS3_k127_1682105_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 518.0
CMS3_k127_1682105_1 Transposase DDE domain K07492 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004615 259.0
CMS3_k127_1682105_2 CCR4-NOT transcription complex subunit K12603,K20363 GO:0000003,GO:0000075,GO:0000077,GO:0000175,GO:0000278,GO:0000288,GO:0000289,GO:0000291,GO:0000956,GO:0003006,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004535,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0008150,GO:0008152,GO:0008284,GO:0008356,GO:0008408,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010603,GO:0010604,GO:0010605,GO:0010606,GO:0010608,GO:0010629,GO:0010638,GO:0010948,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017145,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023052,GO:0030014,GO:0030154,GO:0030330,GO:0031047,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031570,GO:0031571,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033554,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0035194,GO:0035195,GO:0035556,GO:0040029,GO:0042078,GO:0042127,GO:0042770,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043487,GO:0043488,GO:0043928,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045786,GO:0045787,GO:0045930,GO:0045935,GO:0046483,GO:0046700,GO:0048132,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051301,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0065007,GO:0065008,GO:0065009,GO:0070966,GO:0071156,GO:0071158,GO:0071704,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0098722,GO:0098728,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902117,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903311,GO:1903313,GO:1903506,GO:1903508,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000325,GO:2000327,GO:2001141 3.1.13.4 0.0009594 44.0
CMS3_k127_1684681_0 ZIP Zinc transporter K07238,K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 374.0
CMS3_k127_1684681_1 - - - - 0.000006271 58.0
CMS3_k127_1689370_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 379.0
CMS3_k127_1689370_1 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.000000007438 57.0
CMS3_k127_169595_0 PFAM Enoyl-CoA hydratase isomerase K07516 - 1.1.1.35 1.457e-194 625.0
CMS3_k127_169595_1 ABC transporter K01990 - - 0.000000000006031 66.0
CMS3_k127_1697785_0 3-isopropylmalate dehydrogenase activity K00030,K00052 - 1.1.1.41,1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 507.0
CMS3_k127_1697785_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 361.0
CMS3_k127_1697785_2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.0000002018 53.0
CMS3_k127_1702247_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 478.0
CMS3_k127_1702247_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000001073 225.0
CMS3_k127_1703453_0 phosphate transport regulator (Distant homolog of PhoU) K07220 - - 0.00000000000000000000000000000000000000000001116 170.0
CMS3_k127_1703453_1 phosphate transporter K03306 - - 0.000000000000000000000000000000000000259 143.0
CMS3_k127_1703453_2 Glycosyl transferase, family 2 K15762 - - 0.00000000000000000000000000000000002869 146.0
CMS3_k127_1705379_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 400.0
CMS3_k127_1705379_1 YHYH protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 310.0
CMS3_k127_1717793_0 Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' K00231,K00514,K02293,K09879,K21677 - 1.17.8.1,1.3.3.15,1.3.3.4,1.3.5.5,1.3.5.6 0.00000000000000000000000000000000000000000000000000000000000000001253 237.0
CMS3_k127_1717793_1 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000003575 192.0
CMS3_k127_1717793_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000007786 109.0
CMS3_k127_1717793_3 Peptide ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000002946 110.0
CMS3_k127_1723618_0 glycosyl transferase, family 39 - - - 0.0000001654 63.0
CMS3_k127_1724602_0 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 362.0
CMS3_k127_1724602_1 - - - - 0.0000000006732 61.0
CMS3_k127_1730246_0 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 502.0
CMS3_k127_1730246_1 Leucine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000005057 199.0
CMS3_k127_1730246_2 (ABC) transporter K06147 - - 0.00000000000000000000005944 99.0
CMS3_k127_1739331_0 serine-type endopeptidase activity K04771,K08372 - 3.4.21.107 0.0000000000000002225 94.0
CMS3_k127_1746108_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007591 273.0
CMS3_k127_1746108_1 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001057 244.0
CMS3_k127_1751255_0 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000416 216.0
CMS3_k127_1751255_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000001504 216.0
CMS3_k127_1751255_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000002905 206.0
CMS3_k127_1751255_3 PFAM Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000002332 116.0
CMS3_k127_1752033_0 FHA domain - - - 0.000000000000000000000000000000000000000000000000006128 191.0
CMS3_k127_1752033_1 - - - - 0.0000000000000000000000000000004061 129.0
CMS3_k127_1752033_2 endocytosis K03068,K20050 - - 0.00000000000000000000003702 113.0
CMS3_k127_1752033_3 Type II IV secretion system protein K02283,K03609 - - 0.000000009759 62.0
CMS3_k127_1752033_4 - - - - 0.00005401 46.0
CMS3_k127_1756048_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000003853 70.0
CMS3_k127_1757553_0 PFAM fumarate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 553.0
CMS3_k127_1757553_1 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000001812 70.0
CMS3_k127_175936_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 442.0
CMS3_k127_175936_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 368.0
CMS3_k127_175936_2 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 332.0
CMS3_k127_175936_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000008346 207.0
CMS3_k127_175936_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000000000127 200.0
CMS3_k127_175936_5 Nudix hydrolase - - - 0.00000000000000000000000000000000001252 142.0
CMS3_k127_175936_6 Major facilitator Superfamily - - - 0.0000000000000000000000000000005693 138.0
CMS3_k127_175936_9 AntiSigma factor - - - 0.000000002459 68.0
CMS3_k127_176033_0 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000004052 106.0
CMS3_k127_176033_1 Predicted nucleotidyltransferase K07074 - - 0.0004084 48.0
CMS3_k127_1763068_0 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 445.0
CMS3_k127_1763068_1 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 349.0
CMS3_k127_1763068_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000004593 235.0
CMS3_k127_1763068_3 protein, putative amidase K01470 - 3.5.2.10 0.00000000000000000000000002694 121.0
CMS3_k127_1763068_4 PFAM Prolyl oligopeptidase family - - - 0.00000000000001364 78.0
CMS3_k127_1785882_0 Phage portal protein, SPP1 Gp6-like - - - 0.00000000000000000006536 104.0
CMS3_k127_1785882_1 Terminase-like family - - - 0.00001043 49.0
CMS3_k127_1786342_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 8.078e-200 633.0
CMS3_k127_1790246_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 502.0
CMS3_k127_1790246_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 405.0
CMS3_k127_1790246_2 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009695 256.0
CMS3_k127_1790246_3 Phage integrase, N-terminal SAM-like domain K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002799 253.0
CMS3_k127_1790246_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K18926 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000001797 194.0
CMS3_k127_1790246_5 - - - - 0.000000000000000000000000000000000000000000000000000008068 202.0
CMS3_k127_1790246_6 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000003886 180.0
CMS3_k127_1790246_7 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000101 121.0
CMS3_k127_1790246_8 - - - - 0.0000000000000000000000000003975 120.0
CMS3_k127_1790923_0 carboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000122 247.0
CMS3_k127_1790923_1 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000002884 149.0
CMS3_k127_17950_0 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 295.0
CMS3_k127_17950_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 295.0
CMS3_k127_1805713_0 Caspase domain - - - 0.000000000000000000000000000000000000001233 154.0
CMS3_k127_1807252_0 Belongs to the malate synthase family K01638 - 2.3.3.9 2.789e-198 623.0
CMS3_k127_1807252_1 Isocitrate lyase K01637 - 4.1.3.1 0.000000000000000000000000000000000000000000000000000003227 193.0
CMS3_k127_1828027_0 histone H2A K63-linked ubiquitination - - - 0.0000009202 58.0
CMS3_k127_1836850_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 516.0
CMS3_k127_1836850_1 Glycoside-hydrolase family GH114 K01884 - 6.1.1.16 0.0000000000000003113 85.0
CMS3_k127_1836850_2 Cytochrome c554 and c-prime - - - 0.0000156 51.0
CMS3_k127_1843679_0 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000001832 207.0
CMS3_k127_1843679_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000002644 178.0
CMS3_k127_1848828_0 - - - - 0.0000000001169 73.0
CMS3_k127_1848828_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000002782 59.0
CMS3_k127_1850189_0 Belongs to the UPF0255 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 374.0
CMS3_k127_1850189_1 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 309.0
CMS3_k127_1850189_2 branched-chain amino acid transmembrane transporter activity K01996 - - 0.00000000000000000000000000000000000000000000000000000000001495 211.0
CMS3_k127_1850189_3 EamA-like transporter family - - - 0.00000001946 62.0
CMS3_k127_1855834_0 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.0000000000000000000000000000000000001416 158.0
CMS3_k127_1858340_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 475.0
CMS3_k127_1858340_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000006112 149.0
CMS3_k127_1860240_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000008093 90.0
CMS3_k127_1860240_1 polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000211 93.0
CMS3_k127_1860240_2 - - - - 0.000000000002034 71.0
CMS3_k127_1860240_3 intein-mediated protein splicing - - - 0.00007035 49.0
CMS3_k127_1860906_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 563.0
CMS3_k127_1860906_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 494.0
CMS3_k127_1862094_0 PFAM NADH-Ubiquinone oxidoreductase (complex I), chain 5 L domain protein K00341 - 1.6.5.3 4.768e-194 620.0
CMS3_k127_1862094_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 364.0
CMS3_k127_1862094_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000007239 126.0
CMS3_k127_1862094_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000007509 104.0
CMS3_k127_186722_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 465.0
CMS3_k127_186722_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000005826 227.0
CMS3_k127_186722_3 PFAM Response regulator receiver domain K02479 - - 0.0000003248 52.0
CMS3_k127_186722_4 - - - - 0.0000008224 59.0
CMS3_k127_186722_5 - - - - 0.00003416 54.0
CMS3_k127_1868801_0 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001587 276.0
CMS3_k127_1868801_1 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000007718 234.0
CMS3_k127_1868801_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000002239 172.0
CMS3_k127_1871214_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 416.0
CMS3_k127_1871214_1 Male sterility protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000001143 160.0
CMS3_k127_1877596_0 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002078 256.0
CMS3_k127_1880963_0 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000005838 162.0
CMS3_k127_1880963_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000002088 115.0
CMS3_k127_1881851_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 406.0
CMS3_k127_1881851_1 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000579 218.0
CMS3_k127_1881851_2 DinB family - - - 0.00000000000000000000000000000000006783 140.0
CMS3_k127_188389_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 482.0
CMS3_k127_1886695_0 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 325.0
CMS3_k127_1886695_1 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000002981 235.0
CMS3_k127_1894402_0 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000404 138.0
CMS3_k127_1894402_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000364 108.0
CMS3_k127_1901482_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 462.0
CMS3_k127_1903373_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K03387 - - 0.00000000000000000000000000000000000000000000000000000000003759 218.0
CMS3_k127_1903373_1 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000001672 206.0
CMS3_k127_1904266_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000001181 93.0
CMS3_k127_1904266_1 CAAX protease self-immunity - - - 0.00000000000000003534 91.0
CMS3_k127_1906438_0 Carboxymuconolactone decarboxylase family - - - 0.000000000005925 70.0
CMS3_k127_1906438_1 Nacht domain K12132 - 2.7.11.1 0.00000000005201 73.0
CMS3_k127_1910221_0 Protein of unknown function, DUF255 K06888 - - 2.949e-214 682.0
CMS3_k127_1910221_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000002118 182.0
CMS3_k127_1912019_0 ATPase associated with various cellular activities, AAA_5 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 437.0
CMS3_k127_1912019_1 Protein of unknown function DUF58 - - - 0.0000003612 55.0
CMS3_k127_1914402_0 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000006194 218.0
CMS3_k127_1914402_1 META domain - - - 0.000000000000006255 80.0
CMS3_k127_1922245_0 PFAM UbiA prenyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 306.0
CMS3_k127_1922245_1 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 280.0
CMS3_k127_1929273_0 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000002213 201.0
CMS3_k127_1933472_0 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 491.0
CMS3_k127_1933472_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000764 259.0
CMS3_k127_1933472_2 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000005868 209.0
CMS3_k127_1953116_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 507.0
CMS3_k127_1963104_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 538.0
CMS3_k127_1963104_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000002725 139.0
CMS3_k127_1963104_2 Helix-turn-helix domain - - - 0.00000000000001004 86.0
CMS3_k127_196844_0 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 524.0
CMS3_k127_197454_0 PFAM Peptidase family M20 M25 M40 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 499.0
CMS3_k127_197454_1 - - - - 0.00000000000000000000000000000000000000000000009115 179.0
CMS3_k127_1976694_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067,K01790,K19997 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008831,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 1.1.1.133,5.1.3.13,5.1.3.26 0.0000000000000000000000000000000000000000000000000000000000000002552 226.0
CMS3_k127_1976694_1 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000001608 138.0
CMS3_k127_1981742_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 377.0
CMS3_k127_1981742_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000001108 191.0
CMS3_k127_1995007_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 440.0
CMS3_k127_1997884_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000001368 205.0
CMS3_k127_2007033_0 COGs COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 460.0
CMS3_k127_2007033_1 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000147 273.0
CMS3_k127_2007033_2 Cobalt transport protein K16785 - - 0.00000000000000000000000000000000000000000008963 170.0
CMS3_k127_2007033_3 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.00000000000000000000000000000000000000000159 166.0
CMS3_k127_2007033_4 ABC-type cobalt transport system, permease component K16925 - - 0.00000000000000000000000000000000001101 147.0
CMS3_k127_2007033_5 Protein of unknown function (DUF402) K07586 - - 0.000000000000000000000000008232 121.0
CMS3_k127_2007033_6 SPFH Band 7 PHB domain protein - - - 0.0000004084 53.0
CMS3_k127_201091_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0016787,GO:0016822,GO:0016823,GO:0030429 3.7.1.3 0.0000000000000000000000000000000000002472 144.0
CMS3_k127_201091_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000007052 140.0
CMS3_k127_201091_2 DinB superfamily - - - 0.00000000000000001158 93.0
CMS3_k127_201091_3 PFAM Forkhead-associated protein - - - 0.000000000003565 74.0
CMS3_k127_201091_4 Histidine kinase-like ATPase domain K04749,K04757 - 2.7.11.1 0.0000000000216 69.0
CMS3_k127_2011955_0 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 295.0
CMS3_k127_2011955_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000000000000000000003887 145.0
CMS3_k127_2019723_0 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 436.0
CMS3_k127_2019723_1 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 436.0
CMS3_k127_2019723_2 ABC-2 family transporter protein - - - 0.00008114 54.0
CMS3_k127_2019723_3 ABC transporter substrate-binding protein K02035,K15580 - - 0.0004495 50.0
CMS3_k127_2021470_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 604.0
CMS3_k127_2021470_1 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000003256 228.0
CMS3_k127_2033382_0 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 286.0
CMS3_k127_2033382_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000004375 240.0
CMS3_k127_2033382_2 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.000000000000000000000000000006149 124.0
CMS3_k127_203471_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001485 250.0
CMS3_k127_203471_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000003049 197.0
CMS3_k127_203471_2 oxidoreductase K00010,K16043 - 1.1.1.18,1.1.1.369,1.1.1.370 0.000001405 55.0
CMS3_k127_203471_3 OsmC-like protein - - - 0.000004839 50.0
CMS3_k127_203471_4 OsmC-like protein - - - 0.000007611 51.0
CMS3_k127_2035759_0 DNA helicase - - - 0.00000000000000000000000000000000000000000000000000000000000001212 224.0
CMS3_k127_2035759_1 DNA catabolic process, exonucleolytic - - - 0.00000000000000000000000000007709 128.0
CMS3_k127_2046553_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 377.0
CMS3_k127_2046553_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000001444 204.0
CMS3_k127_2046553_2 GAF domain - - - 0.00000000000000000000000000000000000908 157.0
CMS3_k127_2046553_3 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000001 122.0
CMS3_k127_2046553_4 DNA-templated transcription, initiation K03088 - - 0.00000000001655 67.0
CMS3_k127_2053795_0 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000006443 120.0
CMS3_k127_2053795_1 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000004458 84.0
CMS3_k127_2062336_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046983,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000002963 77.0
CMS3_k127_2062336_1 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000001873 75.0
CMS3_k127_2066287_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 363.0
CMS3_k127_2066287_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 292.0
CMS3_k127_207174_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000003872 227.0
CMS3_k127_207174_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000003843 188.0
CMS3_k127_207174_2 PFAM IS1 transposase K07480 - - 0.000001105 51.0
CMS3_k127_2072780_0 PFAM low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000121 201.0
CMS3_k127_2072780_1 GTPase activity K07901 GO:0000003,GO:0000131,GO:0000166,GO:0000910,GO:0001411,GO:0001882,GO:0001883,GO:0002790,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005783,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0006903,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007049,GO:0007107,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009306,GO:0009653,GO:0009987,GO:0010927,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017157,GO:0019001,GO:0019867,GO:0019953,GO:0022402,GO:0022406,GO:0022413,GO:0022414,GO:0022607,GO:0030133,GO:0030154,GO:0030427,GO:0030435,GO:0030437,GO:0031090,GO:0031321,GO:0031410,GO:0031521,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032502,GO:0032505,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0034293,GO:0034613,GO:0035639,GO:0035690,GO:0036094,GO:0042221,GO:0042493,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0045184,GO:0046903,GO:0048193,GO:0048278,GO:0048284,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051179,GO:0051234,GO:0051286,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0070727,GO:0070887,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090174,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098805,GO:0098876,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:1901265,GO:1901363,GO:1903046,GO:1903530,GO:1990778 - 0.00000000000000000000000000000000004542 139.0
CMS3_k127_2072780_2 Cytochrome c K07245,K14166 - - 0.00000000000000000000006354 105.0
CMS3_k127_2074918_0 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000051 180.0
CMS3_k127_2074918_1 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000403 104.0
CMS3_k127_2080151_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 334.0
CMS3_k127_2080151_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000005099 196.0
CMS3_k127_2081645_0 tRNA rRNA methyltransferase K00556,K03218,K03437 - 2.1.1.185,2.1.1.34 0.00000000000000000000000000000000000000000000000006245 184.0
CMS3_k127_2081645_1 - - - - 0.000000001973 65.0
CMS3_k127_2083037_0 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000004447 140.0
CMS3_k127_2083037_1 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000004534 124.0
CMS3_k127_2083037_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000003129 78.0
CMS3_k127_2083921_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 353.0
CMS3_k127_2083921_1 PFAM Helix-turn-helix, type 11 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001024 263.0
CMS3_k127_2083921_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000007382 243.0
CMS3_k127_2083921_3 Forkhead associated domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.00000000000006134 78.0
CMS3_k127_2083921_4 Pfam:Pyridox_oxidase - - - 0.000000001932 63.0
CMS3_k127_2083921_5 cheY-homologous receiver domain - - - 0.00000003725 57.0
CMS3_k127_2088266_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000008612 251.0
CMS3_k127_2102755_0 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 567.0
CMS3_k127_2104187_0 Response regulator, receiver K11443 - - 0.0000000000000000001011 94.0
CMS3_k127_2104187_1 PAS fold - - - 0.000000000008429 70.0
CMS3_k127_2104187_2 protein serine/threonine phosphatase inhibitor activity K03062,K11786,K13216,K17086 GO:0000132,GO:0000226,GO:0000278,GO:0000902,GO:0000904,GO:0001667,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004540,GO:0004857,GO:0004864,GO:0004865,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007163,GO:0007275,GO:0007346,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0008150,GO:0008152,GO:0008157,GO:0008283,GO:0008995,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009790,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0010921,GO:0010923,GO:0016043,GO:0016070,GO:0016477,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0019208,GO:0019212,GO:0019220,GO:0019222,GO:0019439,GO:0019888,GO:0019899,GO:0019902,GO:0019903,GO:0022008,GO:0022402,GO:0030010,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032515,GO:0032989,GO:0032990,GO:0034641,GO:0034655,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0040001,GO:0040011,GO:0042074,GO:0042221,GO:0042330,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043666,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045936,GO:0046483,GO:0046700,GO:0048468,GO:0048519,GO:0048523,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051293,GO:0051294,GO:0051336,GO:0051346,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051726,GO:0060255,GO:0061564,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0097485,GO:0098772,GO:0120036,GO:0120039,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902850,GO:1903047 - 0.00007279 50.0
CMS3_k127_2105400_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 387.0
CMS3_k127_2105400_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002911 240.0
CMS3_k127_2112824_0 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 608.0
CMS3_k127_2113923_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 344.0
CMS3_k127_2113923_1 Psort location Cytoplasmic, score 8.87 K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 302.0
CMS3_k127_2113923_2 - - - - 0.000000001068 64.0
CMS3_k127_2115441_0 Platelet-activating factor acetylhydrolase, isoform II - - - 0.000000000000000000000000000000000000000000000000000003315 206.0
CMS3_k127_2115441_1 Protein conserved in bacteria - - - 0.000000000000000000145 94.0
CMS3_k127_211798_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001062 286.0
CMS3_k127_211798_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000002604 166.0
CMS3_k127_2122522_0 Serine aminopeptidase, S33 - - - 0.000000000000000009392 83.0
CMS3_k127_2122522_1 Rhs_assc_core RHS repeat-associated core domain protein - - - 0.00000000000322 79.0
CMS3_k127_2128134_0 tRNA wobble adenosine to inosine editing - - - 0.00000000006988 67.0
CMS3_k127_2128134_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.00005664 53.0
CMS3_k127_2128609_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 3.066e-289 909.0
CMS3_k127_2128609_1 WD40 repeats K20332 - - 0.00000000000000000000000000000000000002225 152.0
CMS3_k127_2137551_0 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006991 276.0
CMS3_k127_2138115_0 NUBPL iron-transfer P-loop NTPase - - - 0.000000000000000000000000000000000000003716 149.0
CMS3_k127_2138115_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000003084 124.0
CMS3_k127_214263_0 secondary active sulfate transmembrane transporter activity K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 478.0
CMS3_k127_214263_1 Dehydratase K05281 - 1.3.1.45 0.0007204 44.0
CMS3_k127_215391_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 443.0
CMS3_k127_215391_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 366.0
CMS3_k127_215391_10 COG0694 Thioredoxin-like proteins and domains - - - 0.00000005952 59.0
CMS3_k127_215391_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001191 58.0
CMS3_k127_215391_2 Fungal trichothecene efflux pump (TRI12) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 360.0
CMS3_k127_215391_3 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008852 272.0
CMS3_k127_215391_4 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000002515 200.0
CMS3_k127_215391_5 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000002588 187.0
CMS3_k127_215391_6 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000988 150.0
CMS3_k127_215391_7 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000002833 144.0
CMS3_k127_215391_8 type I restriction modification DNA specificity domain - - - 0.0000000000000000000000000000001392 138.0
CMS3_k127_215391_9 - - - - 0.000000000103 75.0
CMS3_k127_2157244_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 516.0
CMS3_k127_2157244_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000007418 186.0
CMS3_k127_2162300_0 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000008781 115.0
CMS3_k127_2167642_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 294.0
CMS3_k127_2167642_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000005428 237.0
CMS3_k127_2167642_2 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000005065 59.0
CMS3_k127_2172685_0 sequence-specific DNA binding K07729 - - 0.000000000000000000000000000000000000165 146.0
CMS3_k127_2172685_1 Domain of unknown function (DUF3471) - - - 0.00005188 48.0
CMS3_k127_2177088_0 PFAM Maf family protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000003843 220.0
CMS3_k127_2177088_1 SMART serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000135 201.0
CMS3_k127_2177088_2 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000002049 161.0
CMS3_k127_2177088_3 Belongs to the 'phage' integrase family K04763 - - 0.00000008262 57.0
CMS3_k127_2182014_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000007634 197.0
CMS3_k127_2183792_0 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 586.0
CMS3_k127_2183842_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341,K12137 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015672,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0051179,GO:0051234,GO:0055085,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 464.0
CMS3_k127_2183842_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 433.0
CMS3_k127_2185379_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000001626 101.0
CMS3_k127_2185379_1 Carboxymuconolactone decarboxylase family - - - 0.0001242 52.0
CMS3_k127_218809_0 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000003872 227.0
CMS3_k127_218809_1 Domain of unknown function (DUF333) K14475 - - 0.000000000000005434 84.0
CMS3_k127_2190869_0 Aldehyde dehydrogenase family K04021,K13922 GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.87 0.000000000000000000000000000000000000000000000000000000000287 206.0
CMS3_k127_2190869_1 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000003156 122.0
CMS3_k127_219570_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 509.0
CMS3_k127_219570_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 309.0
CMS3_k127_219570_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000481 228.0
CMS3_k127_219570_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000006074 112.0
CMS3_k127_2202601_0 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 273.0
CMS3_k127_2202601_1 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000004591 176.0
CMS3_k127_2202601_2 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000006328 169.0
CMS3_k127_2208044_0 PFAM ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 352.0
CMS3_k127_2208044_1 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000697 113.0
CMS3_k127_2214408_0 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004135 242.0
CMS3_k127_2222504_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 325.0
CMS3_k127_2222504_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009581 259.0
CMS3_k127_2225845_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 502.0
CMS3_k127_2225845_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000002065 253.0
CMS3_k127_22268_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 404.0
CMS3_k127_22268_1 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000000000000000000008629 149.0
CMS3_k127_22268_2 Ribosomal prokaryotic L21 protein K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000003925 57.0
CMS3_k127_2234239_0 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000008539 226.0
CMS3_k127_2234239_1 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000000003237 128.0
CMS3_k127_2235681_0 COG0520 Selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 298.0
CMS3_k127_2235681_1 Virulence activator alpha C-term - - - 0.0000000000000000000000000003843 121.0
CMS3_k127_224054_0 Uncharacterised nucleotidyltransferase - - - 0.0000000000001124 82.0
CMS3_k127_2249157_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 391.0
CMS3_k127_2250057_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 554.0
CMS3_k127_2250057_1 Baseplate J-like protein K01218 - 3.2.1.78 0.00000000000000000000000000000000000000000000003785 188.0
CMS3_k127_2251526_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 363.0
CMS3_k127_2251526_1 WD40 domain protein beta Propeller K03641 - - 0.000000000000000000000000000000000003464 151.0
CMS3_k127_2253432_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000002607 153.0
CMS3_k127_2253432_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000002762 91.0
CMS3_k127_2257891_0 CoA-transferase activity K01027,K01028,K01031 - 2.8.3.5,2.8.3.6 4.092e-208 657.0
CMS3_k127_2257891_1 FCD domain - - - 0.000000000000000000000000000002217 128.0
CMS3_k127_2257891_2 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000001779 107.0
CMS3_k127_2267067_0 Ecdysteroid kinase - - - 0.0000000000000000000000000001248 128.0
CMS3_k127_2267067_1 Domain of unknown function (DUF4367) - - - 0.0005125 49.0
CMS3_k127_2270907_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000001011 207.0
CMS3_k127_2270907_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000003657 170.0
CMS3_k127_2270907_2 - - - - 0.000000001489 63.0
CMS3_k127_2273140_0 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000000001711 119.0
CMS3_k127_2273140_2 Serine aminopeptidase, S33 - - - 0.0004561 52.0
CMS3_k127_2275114_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001551 259.0
CMS3_k127_2275114_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001179 253.0
CMS3_k127_2286126_0 COG1520 FOG WD40-like repeat - - - 0.00000000002419 74.0
CMS3_k127_228924_1 ABC-type dipeptide transport system periplasmic component K02035 - - 0.000000000000000000000000000000004152 145.0
CMS3_k127_228924_2 helix_turn_helix, Lux Regulon K14987 - - 0.0000000004959 65.0
CMS3_k127_228924_3 Tetratricopeptide repeat - - - 0.000000002781 68.0
CMS3_k127_22916_0 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 308.0
CMS3_k127_22916_1 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001272 273.0
CMS3_k127_22916_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000003019 199.0
CMS3_k127_22916_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000236 115.0
CMS3_k127_22916_4 Ribosomal protein S21 K02970 - - 0.00000000000000005269 81.0
CMS3_k127_2297029_0 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 310.0
CMS3_k127_2298805_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002246 253.0
CMS3_k127_2298805_1 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.0000000000000000000000002347 112.0
CMS3_k127_229979_0 Acyl-CoA dehydrogenase, C-terminal domain K14448 - 1.3.8.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 420.0
CMS3_k127_2319509_0 PAAR repeat-containing protein - - - 0.00000000000000000000000002416 109.0
CMS3_k127_233348_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000001014 189.0
CMS3_k127_233348_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000001519 117.0
CMS3_k127_2344975_0 ABC-type oligopeptide transport system periplasmic component K02035,K15580 - - 0.000000000000000000000000000000000000000000000000000000000007408 220.0
CMS3_k127_2358639_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 8.181e-220 691.0
CMS3_k127_2358639_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000001154 264.0
CMS3_k127_2358639_2 FCD K11475 - - 0.000000000000000000000000000000000000000000000000000000000000000007916 233.0
CMS3_k127_2358639_3 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000001148 147.0
CMS3_k127_2358639_4 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000001954 139.0
CMS3_k127_2358639_5 Anti-sigma factor - - - 0.00005313 55.0
CMS3_k127_2360024_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 292.0
CMS3_k127_2361326_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 434.0
CMS3_k127_2363098_0 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 298.0
CMS3_k127_2363098_1 formate dehydrogenase - - - 0.00003241 48.0
CMS3_k127_2366769_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001087 250.0
CMS3_k127_2366769_1 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000006368 196.0
CMS3_k127_2366769_2 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000005248 126.0
CMS3_k127_2366769_3 PFAM thioesterase superfamily - - - 0.0000000000000001194 86.0
CMS3_k127_2368252_0 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 339.0
CMS3_k127_2368252_1 Dioxygenase K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000002788 196.0
CMS3_k127_2368252_2 homoserine transmembrane transporter activity K06600,K06895 - - 0.00000000000000000000000001026 118.0
CMS3_k127_2368252_3 Adenylosuccinate lyase C-terminus K01857 - 5.5.1.2 0.00000000000000000000000001412 113.0
CMS3_k127_2368252_4 Alpha beta hydrolase K01055,K14727 - 3.1.1.24,4.1.1.44 0.0000000005226 60.0
CMS3_k127_2369588_0 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 306.0
CMS3_k127_2369588_1 pyridoxamine 5'-phosphate oxidase-related, FMN-binding - - - 0.00000000104 65.0
CMS3_k127_2370992_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 293.0
CMS3_k127_2370992_1 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000001314 201.0
CMS3_k127_2370992_2 nucleoside 2-deoxyribosyltransferase - - - 0.00000000000000000000000000000000000000000000000002241 194.0
CMS3_k127_2370992_3 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000004418 180.0
CMS3_k127_2370992_4 protein homooligomerization - - - 0.0000000000000000000000000000002815 126.0
CMS3_k127_2376148_0 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 383.0
CMS3_k127_2376148_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000002635 209.0
CMS3_k127_2383748_0 PFAM Shikimate quinate 5-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000003047 228.0
CMS3_k127_2383748_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000002724 154.0
CMS3_k127_2383748_2 TIR domain - - - 0.00005315 55.0
CMS3_k127_2398911_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000001984 149.0
CMS3_k127_2398911_1 Lysin motif - - - 0.0000001765 61.0
CMS3_k127_2403761_0 Belongs to the HpcH HpaI aldolase family K01644,K08691 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006107,GO:0008150,GO:0008152,GO:0009987,GO:0015977,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0043167,GO:0043169,GO:0043427,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046872,GO:0047777,GO:0050083,GO:0071704 4.1.3.24,4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001125 278.0
CMS3_k127_2403761_1 PFAM MaoC domain protein dehydratase K14449 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0015977,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043427,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046185,GO:0046395,GO:0046487,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.0000000000000000000000000000000000000000000000000000004875 196.0
CMS3_k127_2403761_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000008313 82.0
CMS3_k127_2404724_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 334.0
CMS3_k127_2404724_1 Subtilase family - - - 0.00055 46.0
CMS3_k127_2405029_0 - - - - 0.000000000000000000000000003116 115.0
CMS3_k127_2408629_0 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 397.0
CMS3_k127_2411398_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 314.0
CMS3_k127_2411398_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000002493 269.0
CMS3_k127_2411398_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000005587 171.0
CMS3_k127_2415307_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 348.0
CMS3_k127_2415307_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 289.0
CMS3_k127_2415307_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000003627 248.0
CMS3_k127_2415307_3 Major facilitator Superfamily - - - 0.0000003626 54.0
CMS3_k127_2417277_0 - - - - 0.000000005418 61.0
CMS3_k127_2423542_0 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000002181 89.0
CMS3_k127_2423542_1 sh3 domain protein K01448 - 3.5.1.28 0.00000001375 63.0
CMS3_k127_2429410_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00033,K00616,K01810,K08300,K13810 - 1.1.1.343,1.1.1.44,2.2.1.2,3.1.26.12,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 424.0
CMS3_k127_2429410_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 411.0
CMS3_k127_243001_0 Putative glutamine amidotransferase K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 591.0
CMS3_k127_243001_1 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000003654 122.0
CMS3_k127_243127_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 287.0
CMS3_k127_243127_1 Phosphotransferase enzyme family - - - 0.0000001263 63.0
CMS3_k127_2434027_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.09e-228 715.0
CMS3_k127_2434027_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000003773 136.0
CMS3_k127_2435448_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 311.0
CMS3_k127_2436562_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006475 285.0
CMS3_k127_2451279_0 Two component transcriptional regulator, winged helix family K07668 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001843 269.0
CMS3_k127_2451279_1 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.00000000000000000000008555 107.0
CMS3_k127_2459852_0 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.0000000000000000000000000000001082 128.0
CMS3_k127_2459852_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000006781 120.0
CMS3_k127_2461319_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 9.04e-322 1004.0
CMS3_k127_2461319_1 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 350.0
CMS3_k127_2461319_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000002129 70.0
CMS3_k127_2462319_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000001257 87.0
CMS3_k127_2462319_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000004681 68.0
CMS3_k127_2469268_0 Transcriptional regulatory protein, C terminal K02483,K07667 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000007316 197.0
CMS3_k127_2469268_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000006745 171.0
CMS3_k127_2470952_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003778 263.0
CMS3_k127_2470952_1 PFAM BMC domain - - - 0.00000000000000000000000000000000000000000000000000000000000001847 217.0
CMS3_k127_2470952_2 BMC K04027 - - 0.0000000000000000000000000000000000000226 146.0
CMS3_k127_2470952_3 Ethanolamine utilisation protein EutN/carboxysome - - - 0.00000000000000000000000000005561 118.0
CMS3_k127_2470952_4 cheY-homologous receiver domain - - - 0.0005415 48.0
CMS3_k127_2474414_0 PFAM Stage II sporulation E family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002534 247.0
CMS3_k127_2474414_1 Preprotein translocase subunit K03210 - - 0.00000000843 61.0
CMS3_k127_2474414_2 PFAM TrkA-N domain protein - - - 0.00001192 52.0
CMS3_k127_2474414_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0004226 45.0
CMS3_k127_2481576_0 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 325.0
CMS3_k127_2481576_1 C-terminal four TMM region of protein-O-mannosyltransferase - - - 0.00000000112 68.0
CMS3_k127_2481597_0 - - - - 0.0000000000124 78.0
CMS3_k127_2483369_0 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 441.0
CMS3_k127_248505_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000009544 235.0
CMS3_k127_248505_1 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000004327 163.0
CMS3_k127_248505_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000005438 102.0
CMS3_k127_248505_3 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.000000000000002638 86.0
CMS3_k127_2485057_0 Reductive dehalogenase subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 315.0
CMS3_k127_2485057_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000001618 140.0
CMS3_k127_249284_0 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 302.0
CMS3_k127_249284_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 293.0
CMS3_k127_249284_2 Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 264.0
CMS3_k127_249284_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000004416 155.0
CMS3_k127_249284_4 Tetratricopeptide repeat - - - 0.000000002731 64.0
CMS3_k127_249284_5 PFAM NB-ARC domain protein K03619,K05838 - - 0.0004058 52.0
CMS3_k127_2499641_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 377.0
CMS3_k127_2501053_0 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000178 287.0
CMS3_k127_2501053_1 Nudix hydrolase - - - 0.00000000000000000000000000000000001226 144.0
CMS3_k127_2501053_2 - - - - 0.000000107 61.0
CMS3_k127_2506029_0 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 326.0
CMS3_k127_2506029_1 heat shock protein 70 - - - 0.000000000003149 67.0
CMS3_k127_2506029_2 PBS lyase HEAT-like repeat - - - 0.000000000105 71.0
CMS3_k127_25117_0 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 466.0
CMS3_k127_2514059_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005874 499.0
CMS3_k127_2516564_0 Sel1-like repeats. K07126 - - 0.00000117 57.0
CMS3_k127_2517554_0 Copper amine oxidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
CMS3_k127_2517554_1 serine threonine protein kinase K03587,K08884,K12132 - 2.7.11.1,3.4.16.4 0.00000000000000005939 89.0
CMS3_k127_2527428_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000006226 168.0
CMS3_k127_2527428_1 Peptidase family M28 - - - 0.00000000000000000000000000000007656 133.0
CMS3_k127_2532508_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 319.0
CMS3_k127_2532508_1 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000001703 235.0
CMS3_k127_2536428_0 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000005358 218.0
CMS3_k127_2536428_1 DNA-binding transcription factor activity K02470,K03833 - 5.99.1.3 0.0000000000000000000000000000000000001994 154.0
CMS3_k127_2536428_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000009048 128.0
CMS3_k127_2550459_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000003208 201.0
CMS3_k127_2550459_1 domain protein - - - 0.000000000000000001096 92.0
CMS3_k127_2551639_0 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.0000000000000000000000000000000000007118 146.0
CMS3_k127_2551639_1 PFAM ABC-2 type transporter - - - 0.0000000000000007543 83.0
CMS3_k127_2554314_0 PFAM ABC transporter related K09972 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 412.0
CMS3_k127_2554314_1 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 339.0
CMS3_k127_2554314_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 325.0
CMS3_k127_2554314_3 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 297.0
CMS3_k127_2565688_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000565 261.0
CMS3_k127_2565688_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000002417 181.0
CMS3_k127_2565688_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000002476 143.0
CMS3_k127_2565688_3 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001411 124.0
CMS3_k127_2565688_4 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001542 107.0
CMS3_k127_2565688_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000105 83.0
CMS3_k127_2566018_0 COG0531 Amino acid transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 410.0
CMS3_k127_2566018_1 ATPase-coupled phosphate ion transmembrane transporter activity K02036,K06857 - 3.6.3.27,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000174 273.0
CMS3_k127_2566018_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009267 270.0
CMS3_k127_2566018_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000181 253.0
CMS3_k127_2566018_4 Putative sensor - - - 0.00000000000000000000000000000000000000204 161.0
CMS3_k127_2580739_0 PFAM response regulator receiver K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009012 278.0
CMS3_k127_2580739_1 PFAM type II secretion system protein E K02283 - - 0.00000000000000000000000000000114 126.0
CMS3_k127_2580739_2 Flp pilus assembly protein CpaB K02279 - - 0.00005403 47.0
CMS3_k127_2580973_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 8.578e-229 722.0
CMS3_k127_2591279_0 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000002327 171.0
CMS3_k127_2591279_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000004367 169.0
CMS3_k127_2591308_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 370.0
CMS3_k127_2591308_1 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.0000000000000000000000000000000000000000000000000001254 197.0
CMS3_k127_2595336_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 373.0
CMS3_k127_2595336_1 synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000001694 179.0
CMS3_k127_2595336_2 light absorption K06893 - - 0.00000000000000000000000000000000000000006201 157.0
CMS3_k127_2604836_0 PFAM BMC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001793 272.0
CMS3_k127_2604836_1 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000001984 163.0
CMS3_k127_2604836_2 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000006494 134.0
CMS3_k127_2604836_3 PFAM glycosyl transferase family 39 - - - 0.000000000000001059 87.0
CMS3_k127_2608487_0 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000000001005 233.0
CMS3_k127_2608487_1 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000000000000001674 136.0
CMS3_k127_2608487_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0006012 50.0
CMS3_k127_2608487_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0009344 46.0
CMS3_k127_2618786_0 PFAM Methionine synthase vitamin-B12 independent K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 548.0
CMS3_k127_2618786_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 405.0
CMS3_k127_2618786_2 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005612 264.0
CMS3_k127_2625677_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 591.0
CMS3_k127_2625677_1 Protein conserved in bacteria - - - 0.0000002439 53.0
CMS3_k127_2627853_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 306.0
CMS3_k127_2627853_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000001045 114.0
CMS3_k127_2632163_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001538 170.0
CMS3_k127_2635291_0 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000001407 158.0
CMS3_k127_2639392_0 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 430.0
CMS3_k127_2639392_1 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 355.0
CMS3_k127_2644331_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 391.0
CMS3_k127_2644331_1 Belongs to the MenA family. Type 1 subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 295.0
CMS3_k127_2644331_2 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000001119 220.0
CMS3_k127_2647102_0 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 299.0
CMS3_k127_2647102_1 Phosphonate ABC transporter K02044 - - 0.00000000000001754 84.0
CMS3_k127_2647102_2 - - - - 0.0000001831 55.0
CMS3_k127_2651175_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.863e-206 651.0
CMS3_k127_2651175_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 537.0
CMS3_k127_2651175_2 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000003245 197.0
CMS3_k127_2651175_3 MerR, DNA binding - - - 0.00000000000000000003903 94.0
CMS3_k127_2651175_4 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.0000000001053 66.0
CMS3_k127_2652090_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003034 269.0
CMS3_k127_2652090_1 - - - - 0.00000000000000001154 91.0
CMS3_k127_2652397_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 338.0
CMS3_k127_2652397_1 FAD binding domain in molybdopterin dehydrogenase K03519,K12529 - 1.2.5.3 0.0000000000001428 77.0
CMS3_k127_2657677_0 Permease K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000004829 237.0
CMS3_k127_2657677_1 COG0531 Amino acid transporters - - - 0.000000000000000000008033 107.0
CMS3_k127_2659510_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005252 280.0
CMS3_k127_2659510_1 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000000001212 147.0
CMS3_k127_2659510_2 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000007802 143.0
CMS3_k127_2659510_3 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0006879 45.0
CMS3_k127_2660541_0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001317 281.0
CMS3_k127_2660541_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000002025 243.0
CMS3_k127_2660736_0 thiolester hydrolase activity - - - 0.0000000000000000000003144 107.0
CMS3_k127_266631_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 572.0
CMS3_k127_266631_1 Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000005471 213.0
CMS3_k127_266631_2 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000115 202.0
CMS3_k127_266631_3 Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000004441 205.0
CMS3_k127_2669950_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000005276 230.0
CMS3_k127_2669950_1 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000001478 200.0
CMS3_k127_2669950_2 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000005215 128.0
CMS3_k127_2674219_0 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000382 160.0
CMS3_k127_2674219_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000007836 68.0
CMS3_k127_2674219_2 - - - - 0.0000001697 60.0
CMS3_k127_2676044_0 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 327.0
CMS3_k127_2677469_0 protein kinase activity - - - 0.000000000000000000000000000000000000000002713 171.0
CMS3_k127_2677469_1 protein serine/threonine phosphatase activity - - - 0.000000000000000000000000007257 120.0
CMS3_k127_2688552_0 Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000203 233.0
CMS3_k127_2688552_1 Sulfotransferase family - - - 0.0000000000000000000000000000000000000007404 163.0
CMS3_k127_2691830_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000002334 226.0
CMS3_k127_2691830_1 PFAM VanW family protein - - - 0.0000000000000000000000000000000000000000000000000000003257 205.0
CMS3_k127_2691830_2 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000251 203.0
CMS3_k127_2702931_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 299.0
CMS3_k127_2706601_0 Mu-like prophage major head subunit gpT - - - 0.000000000000000000000000000000000000000000000000000004792 198.0
CMS3_k127_2706601_1 - - - - 0.0000000000001846 78.0
CMS3_k127_2707951_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 344.0
CMS3_k127_2707951_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000001741 168.0
CMS3_k127_2707951_2 SnoaL-like polyketide cyclase - - - 0.000000000000000000007812 97.0
CMS3_k127_2709798_0 ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 401.0
CMS3_k127_2712981_0 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 469.0
CMS3_k127_2712981_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000341 162.0
CMS3_k127_2712981_2 PhoQ Sensor - - - 0.0000000000000000001528 90.0
CMS3_k127_2712981_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.000000000003547 66.0
CMS3_k127_2722512_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 415.0
CMS3_k127_2724413_0 Belongs to the arginase family K01480,K18459 - 3.5.3.11,3.5.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 432.0
CMS3_k127_2724413_1 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001938 258.0
CMS3_k127_2729891_0 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000005478 222.0
CMS3_k127_2736307_0 esterase K07017 - - 0.000000000000000000000000000000000006238 147.0
CMS3_k127_2736307_1 Bacterial transcriptional activator domain - - - 0.000000000000000000001409 98.0
CMS3_k127_2753694_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 379.0
CMS3_k127_2753694_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 321.0
CMS3_k127_2755181_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 569.0
CMS3_k127_2755181_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000001029 229.0
CMS3_k127_2761950_0 Rad50 zinc hook motif K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002845 269.0
CMS3_k127_2769005_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 299.0
CMS3_k127_2769005_1 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.00000000004386 70.0
CMS3_k127_277407_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 347.0
CMS3_k127_277407_1 PFAM Cobyrinic acid a,c-diamide synthase K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 339.0
CMS3_k127_277407_2 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004252 247.0
CMS3_k127_277407_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.0000000000000000000000000000000000000000000001718 176.0
CMS3_k127_277407_4 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000796 81.0
CMS3_k127_277407_5 - - - - 0.000000000002942 76.0
CMS3_k127_277407_6 Helix-turn-helix domain - - - 0.0003034 50.0
CMS3_k127_2778408_0 - - - - 0.00000000000000000000000000009892 130.0
CMS3_k127_2785283_0 Isocitrate lyase K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 476.0
CMS3_k127_2785283_1 Pyridoxamine 5'-phosphate oxidase K09979 - - 0.0000000000000000000000000000000000000002281 157.0
CMS3_k127_2785283_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000005716 96.0
CMS3_k127_2790131_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000102 250.0
CMS3_k127_2790131_1 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000005936 210.0
CMS3_k127_2790131_2 4Fe-4S dicluster domain K00125,K03646 - 1.17.1.9 0.000000000000000000000000000001342 135.0
CMS3_k127_2790131_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00125 - 1.17.1.9 0.0000002164 56.0
CMS3_k127_2794787_0 PFAM IstB domain protein ATP-binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 433.0
CMS3_k127_2794787_1 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000001858 163.0
CMS3_k127_2794787_2 TIGRFAM primosome, DnaD subunit - - - 0.000000000000000000000000000000000000003535 154.0
CMS3_k127_2795511_0 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000001137 238.0
CMS3_k127_2797760_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 351.0
CMS3_k127_2800670_0 signal transduction histidine kinase K11623 - 2.7.13.3 0.000000000000000000000000000000000000000000000000004182 198.0
CMS3_k127_2800670_1 - - - - 0.0000000000000000000000000000000000000003257 161.0
CMS3_k127_2800670_2 response regulator K02479 - - 0.000000000001281 69.0
CMS3_k127_2807903_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000003567 81.0
CMS3_k127_2810311_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 296.0
CMS3_k127_2814362_0 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 456.0
CMS3_k127_2816720_0 DinB superfamily - - - 0.0000000000000000000000000000000000000002098 157.0
CMS3_k127_2816720_1 Alternative locus ID - - - 0.00000000000000000000000000000009138 127.0
CMS3_k127_2816720_2 - - - - 0.00000000000000000000000005606 109.0
CMS3_k127_2816720_3 DsrE/DsrF/DrsH-like family - - - 0.000000000000000004696 85.0
CMS3_k127_2816720_4 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000543 70.0
CMS3_k127_2816720_6 Cro/C1-type HTH DNA-binding domain - - - 0.000000000001191 76.0
CMS3_k127_2816720_7 Alternative locus ID - - - 0.00000000004444 65.0
CMS3_k127_2823270_0 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 343.0
CMS3_k127_2823270_1 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006837 278.0
CMS3_k127_2825864_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 476.0
CMS3_k127_2825864_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 322.0
CMS3_k127_2830145_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000006721 133.0
CMS3_k127_2830145_1 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.00000000000000000000009878 102.0
CMS3_k127_2842996_0 Tetratricopeptide repeat - - - 0.000299 52.0
CMS3_k127_2846610_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000009239 107.0
CMS3_k127_2850348_0 sh3 domain protein K01227,K03642 - 3.2.1.96 0.00000000000000000000000007942 121.0
CMS3_k127_2850348_1 - - - - 0.00000000000001808 81.0
CMS3_k127_2854343_0 PFAM ABC transporter transmembrane region K06147 - - 1.2e-253 797.0
CMS3_k127_2854343_1 PFAM ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 469.0
CMS3_k127_2854343_2 Serine threonine protein kinase - - - 0.00000000000000000000000000002926 121.0
CMS3_k127_2854343_3 PFAM regulatory protein, MarR - - - 0.0003132 49.0
CMS3_k127_2854787_0 NACHT domain - - - 0.0000000000000000000000276 111.0
CMS3_k127_2855014_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000003559 157.0
CMS3_k127_2855014_1 phosphate regulon transcriptional regulatory protein PhoB K07657 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000001359 72.0
CMS3_k127_2856354_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 399.0
CMS3_k127_2864647_0 Lipoate-protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 349.0
CMS3_k127_2864647_1 glycine decarboxylation via glycine cleavage system K02437 - - 0.000000000000000000000000000000000000000000000000000009131 192.0
CMS3_k127_2864647_2 glycine decarboxylation via glycine cleavage system K02437 - - 0.0000000000000000000000000000000000000000000000000001955 189.0
CMS3_k127_2864647_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000003572 104.0
CMS3_k127_2864665_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
CMS3_k127_2864665_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001866 249.0
CMS3_k127_2865624_0 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 288.0
CMS3_k127_2865624_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000000000001219 234.0
CMS3_k127_2876976_0 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002206 282.0
CMS3_k127_2876976_1 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
CMS3_k127_2876976_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001578 144.0
CMS3_k127_2877596_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 449.0
CMS3_k127_2877778_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 1.112e-209 661.0
CMS3_k127_2877778_1 S-(hydroxymethyl)glutathione dehydrogenase activity - - - 0.00000000000000000000000000000000000000000004495 164.0
CMS3_k127_2880930_0 Belongs to the FPP GGPP synthase family K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.90 0.00000000000000000000000000000000000000000000007126 180.0
CMS3_k127_2880930_1 Belongs to the GbsR family - - - 0.000000000000000006385 90.0
CMS3_k127_2880930_2 lipolytic protein G-D-S-L family K18650 - 3.2.1.82 0.0000000004529 62.0
CMS3_k127_2886664_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009892 272.0
CMS3_k127_2886664_1 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000001237 130.0
CMS3_k127_2886664_2 Transcriptional regulator K03603,K05799 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043207,GO:0043565,GO:0044403,GO:0044419,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0075136,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000002656 112.0
CMS3_k127_2886664_3 - - - - 0.000000002333 66.0
CMS3_k127_2886842_0 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 418.0
CMS3_k127_2886842_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 372.0
CMS3_k127_2886842_2 Histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000009868 187.0
CMS3_k127_2888532_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006465 262.0
CMS3_k127_2888532_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000001797 162.0
CMS3_k127_2892911_0 PFAM DegV family protein - - - 0.0000000000000000000000000000000000000000000000000000000002529 212.0
CMS3_k127_2892911_1 Hep Hag repeat protein - - - 0.00000000000000000000000003779 114.0
CMS3_k127_2892911_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000006558 88.0
CMS3_k127_2892911_3 YbaK prolyl-tRNA synthetase associated region - - - 0.0000000000001232 74.0
CMS3_k127_2894781_1 SnoaL-like domain - - - 0.000000000000003484 81.0
CMS3_k127_2899497_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000002247 199.0
CMS3_k127_2899497_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000003942 190.0
CMS3_k127_2899497_2 Protein of unknown function (DUF1385) K09153 - - 0.0000000000000000000000000001978 120.0
CMS3_k127_2899497_3 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000006727 101.0
CMS3_k127_2900179_0 PFAM NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 520.0
CMS3_k127_2900179_1 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000001612 241.0
CMS3_k127_2900179_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000001007 169.0
CMS3_k127_2902891_0 esterase K07017 - - 0.00000000000000000000000000000000000001593 155.0
CMS3_k127_2903323_0 PFAM carbohydrate kinase K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 308.0
CMS3_k127_2903323_1 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000001051 111.0
CMS3_k127_2903323_2 transcriptional activator domain - - - 0.000000004942 66.0
CMS3_k127_2914438_0 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000000911 174.0
CMS3_k127_2945783_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 452.0
CMS3_k127_2945783_1 adenylyl cyclase CyaB K05873 - 4.6.1.1 0.0000007305 54.0
CMS3_k127_295662_0 Belongs to the arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 362.0
CMS3_k127_295662_1 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000005105 104.0
CMS3_k127_295662_2 Protein of unknown function (DUF952) - - - 0.0000000000000000000375 93.0
CMS3_k127_295874_0 saccharopine dehydrogenase activity K19064 - 1.4.1.18 0.00000000000000000000000000461 114.0
CMS3_k127_295874_1 sequence-specific DNA binding K07726 - - 0.000000000031 66.0
CMS3_k127_2966596_0 PFAM glycoside hydrolase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 355.0
CMS3_k127_2968026_0 Peptidase family M23 - - - 0.0000000000000000000000000001801 125.0
CMS3_k127_2968026_1 - - - - 0.000000009444 65.0
CMS3_k127_2968256_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 473.0
CMS3_k127_2968256_1 - - - - 0.0000000000000000000003692 97.0
CMS3_k127_2977064_0 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 292.0
CMS3_k127_2984404_0 epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000008051 232.0
CMS3_k127_2984404_1 PFAM glycoside hydrolase family 39 - - - 0.00003772 55.0
CMS3_k127_2987764_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005235 270.0
CMS3_k127_2987764_1 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000007926 205.0
CMS3_k127_2987764_2 - - - - 0.0000000000000000000000007107 113.0
CMS3_k127_2987764_3 PFAM response regulator receiver K02282 - - 0.000000000000000000004703 98.0
CMS3_k127_2990082_0 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000003651 93.0
CMS3_k127_2990082_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.0001177 51.0
CMS3_k127_2993051_0 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 1.137e-208 661.0
CMS3_k127_2993125_0 Sulfatase K01138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001134 258.0
CMS3_k127_2993125_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000002667 218.0
CMS3_k127_2993125_2 amine dehydrogenase activity - - - 0.0000000000009008 77.0
CMS3_k127_3002580_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 9.535e-248 771.0
CMS3_k127_3002580_1 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000000000000000000000000002542 219.0
CMS3_k127_3002580_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000002997 153.0
CMS3_k127_3008328_0 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000000000000000000000008947 210.0
CMS3_k127_3008328_1 PFAM ABC transporter related K16786,K16787 - - 0.00000000000000000000000000003552 119.0
CMS3_k127_3008328_2 ECF-type riboflavin transporter, S component K16924 - - 0.000000000000000000000000594 118.0
CMS3_k127_3009450_0 PFAM GHMP kinase K00869 - 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 313.0
CMS3_k127_3009450_1 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000128 228.0
CMS3_k127_3009563_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 464.0
CMS3_k127_3009563_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000005486 226.0
CMS3_k127_3009563_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000005929 133.0
CMS3_k127_3009563_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000003237 61.0
CMS3_k127_3011498_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001185 278.0
CMS3_k127_3011498_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000002564 152.0
CMS3_k127_3011498_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000008676 146.0
CMS3_k127_3011498_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000186 145.0
CMS3_k127_3011498_4 EamA-like transporter family - - - 0.000000000000000000000002068 109.0
CMS3_k127_3011498_5 Phage shock protein C, PspC K03973 - - 0.000000000003485 72.0
CMS3_k127_3011498_6 Acetyltransferase (GNAT) domain - - - 0.0000000002685 68.0
CMS3_k127_3015635_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001841 287.0
CMS3_k127_3015635_1 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000005317 178.0
CMS3_k127_3022785_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000009947 129.0
CMS3_k127_3022785_1 peptidyl-tyrosine sulfation - - - 0.000001173 61.0
CMS3_k127_3022785_2 Polysaccharide biosynthesis protein K03328 - - 0.000008642 52.0
CMS3_k127_3029241_0 Penicillin-Binding Protein C-terminus Family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 488.0
CMS3_k127_3029241_1 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000004725 228.0
CMS3_k127_3031884_0 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000003101 208.0
CMS3_k127_3031884_1 Immune inhibitor A peptidase M6 - - - 0.00000000000000000000000000000000000000000000045 185.0
CMS3_k127_3040002_0 - - - - 0.0000000000000000000000000000000000003195 144.0
CMS3_k127_3040002_1 - - - - 0.000000000000000000000000000685 114.0
CMS3_k127_3040002_2 stress-induced mitochondrial fusion - - - 0.0000000001906 64.0
CMS3_k127_3041521_0 FAD binding domain - - - 0.00000000000000000000000000000000000008593 152.0
CMS3_k127_3050297_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 297.0
CMS3_k127_3053437_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003421 258.0
CMS3_k127_3070972_0 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000005937 265.0
CMS3_k127_3070972_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001213 256.0
CMS3_k127_3075398_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 400.0
CMS3_k127_3075398_1 Shikimate quinate 5-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000002543 215.0
CMS3_k127_3075398_2 histidine kinase A domain protein - - - 0.00001612 52.0
CMS3_k127_3077538_0 C4-type zinc ribbon domain K07164 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.00000000000001958 82.0
CMS3_k127_3077538_1 Signal transduction protein with Nacht domain - - - 0.0000000000004199 82.0
CMS3_k127_3082104_0 PFAM ABC transporter related K02056 - 3.6.3.17 1.573e-195 623.0
CMS3_k127_3082104_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 302.0
CMS3_k127_3082104_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 295.0
CMS3_k127_3082104_3 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.00000000000000005817 81.0
CMS3_k127_3082104_4 Transposase - - - 0.0000000001271 64.0
CMS3_k127_3082104_5 COG3293 Transposase and inactivated derivatives - - - 0.000001078 52.0
CMS3_k127_3082104_6 Cellulase (glycosyl hydrolase family 5) - - - 0.000003953 59.0
CMS3_k127_3082469_0 ATP hydrolysis coupled proton transport - - - 0.000000000000000000000000000000000000000000000000000000000004041 214.0
CMS3_k127_3082469_1 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000002809 162.0
CMS3_k127_3082955_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 295.0
CMS3_k127_3082955_1 serine-type aminopeptidase activity K14475 - - 0.0000000000000009893 78.0
CMS3_k127_3085778_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 336.0
CMS3_k127_3085778_1 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.000000000000000000000000000003286 124.0
CMS3_k127_3089700_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.00000000000000000000000000000000000000000000000000000001719 199.0
CMS3_k127_3089700_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000001887 136.0
CMS3_k127_3089700_2 TPR repeat - - - 0.00000000000000000000000000000735 133.0
CMS3_k127_3089700_3 Involved in the tonB-independent uptake of proteins K03641 - - 0.00003134 48.0
CMS3_k127_3092924_0 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000001371 138.0
CMS3_k127_3092924_1 Protein of unknown function (DUF1295) - - - 0.0000000000000000000000000000000002731 132.0
CMS3_k127_3092924_3 PFAM Bacterial extracellular solute-binding proteins, family 3 K09969 - - 0.00000000000000000000000007411 124.0
CMS3_k127_3092924_4 WD-40 repeat - - - 0.00000000005437 76.0
CMS3_k127_3099260_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000256 233.0
CMS3_k127_3099260_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000003507 219.0
CMS3_k127_3099260_2 Transcriptional regulator of aromatic amino acids metabolism K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000003078 175.0
CMS3_k127_3099260_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000001214 167.0
CMS3_k127_3099260_4 - - - - 0.00000000000000000000000000000000008727 136.0
CMS3_k127_3099260_5 transcription factor binding K13599 - - 0.00000000000000000003176 94.0
CMS3_k127_3104191_0 PBP superfamily domain K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000001959 221.0
CMS3_k127_3104191_1 sh3 domain protein - - - 0.00000000000000000000000000000000004965 151.0
CMS3_k127_3104191_2 Peptidase family M50 - - - 0.000000000000000000000000000002451 124.0
CMS3_k127_3104463_0 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 437.0
CMS3_k127_3104463_1 Mazg nucleotide pyrophosphohydrolase - - - 0.000000000000000000000007601 104.0
CMS3_k127_3107519_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 490.0
CMS3_k127_3107519_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000001326 149.0
CMS3_k127_3107519_2 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000000000000000000002817 140.0
CMS3_k127_3107519_3 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000007672 94.0
CMS3_k127_3107519_4 PFAM methyltransferase - - - 0.000000000005985 75.0
CMS3_k127_3107519_5 Inositol monophosphatase K01092 - 3.1.3.25 0.00000007043 56.0
CMS3_k127_3109635_1 - - - - 0.00000000000000000001047 93.0
CMS3_k127_3111961_0 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000008012 269.0
CMS3_k127_3111961_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000005547 218.0
CMS3_k127_3123530_0 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 304.0
CMS3_k127_3125798_0 Sulfotransferase family - - - 0.000000000000000001392 98.0
CMS3_k127_3130339_0 Glycosyl hydrolases family 39 - - - 0.0002712 52.0
CMS3_k127_3130979_0 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 377.0
CMS3_k127_3130979_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000003895 177.0
CMS3_k127_3130979_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000003184 156.0
CMS3_k127_3131456_0 PspC domain protein K03973 - - 0.0000000000000006346 79.0
CMS3_k127_3131456_1 PspC domain - - - 0.00000000000009831 74.0
CMS3_k127_3131456_2 positive regulation of macromolecule biosynthetic process K03970,K03973 - - 0.0000006047 52.0
CMS3_k127_3135653_0 Carbamoyl-phosphate synthetase large chain domain protein K01961,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009798 610.0
CMS3_k127_3135653_1 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 361.0
CMS3_k127_3135653_2 CoA carboxylase activity K01966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575 2.1.3.15,6.4.1.3 0.000000000000000000001783 93.0
CMS3_k127_3135653_3 Biotin-requiring enzyme - - - 0.000000000000000000002009 100.0
CMS3_k127_3136519_0 sh3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001663 243.0
CMS3_k127_3136519_1 integral membrane protein - - - 0.0000000000000000000000000004696 119.0
CMS3_k127_3136519_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000001342 70.0
CMS3_k127_3138784_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 392.0
CMS3_k127_3148185_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 541.0
CMS3_k127_3149469_0 EamA-like transporter family - - - 0.000000000000000000000007612 105.0
CMS3_k127_3151006_0 NUBPL iron-transfer P-loop NTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 372.0
CMS3_k127_3151006_1 PFAM histidine kinase HAMP region domain protein - - - 0.0000000789 55.0
CMS3_k127_3151267_0 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001381 254.0
CMS3_k127_3151267_1 beta-glucosidase activity K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000002264 216.0
CMS3_k127_3152704_0 PFAM ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 377.0
CMS3_k127_3152704_1 Phage integrase family - - - 0.000008203 51.0
CMS3_k127_3152922_0 Belongs to the peptidase S1B family - - - 0.000005638 57.0
CMS3_k127_3153435_0 - - - - 0.0000000000000000000000001882 112.0
CMS3_k127_3153435_1 trisaccharide binding K11912 - 2.7.11.1 0.00000000000000000002938 106.0
CMS3_k127_3157565_0 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000007242 201.0
CMS3_k127_3165081_0 M42 glutamyl aminopeptidase K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 308.0
CMS3_k127_3165081_1 peptidase M42 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 305.0
CMS3_k127_3165081_2 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 296.0
CMS3_k127_3165081_3 domain, Protein - - - 0.0000000000000000000005013 106.0
CMS3_k127_3165081_4 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.000000008589 59.0
CMS3_k127_3167545_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 554.0
CMS3_k127_3167545_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000003844 84.0
CMS3_k127_3169413_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 508.0
CMS3_k127_3169413_1 COG2801 Transposase and inactivated derivatives K07497 - - 0.0009923 43.0
CMS3_k127_3173857_0 ATPase associated with various cellular activities, AAA_5 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 325.0
CMS3_k127_3179620_0 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 369.0
CMS3_k127_3180632_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000001232 116.0
CMS3_k127_3180632_1 membrane - - - 0.000007552 55.0
CMS3_k127_3183410_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002427 252.0
CMS3_k127_3183410_1 Protein of unknown function (DUF4013) - - - 0.000000000000000000008876 100.0
CMS3_k127_3186461_0 PFAM ABC transporter related K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000001209 235.0
CMS3_k127_3186461_1 ECF-type riboflavin transporter, S component K16924 - - 0.0000000000000007121 82.0
CMS3_k127_319710_0 PFAM MmgE PrpD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 365.0
CMS3_k127_3199887_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 505.0
CMS3_k127_3199887_1 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000006631 195.0
CMS3_k127_3217994_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000000000000000000000000005454 199.0
CMS3_k127_3217994_1 Histidine kinase - - - 0.00000000000000000648 96.0
CMS3_k127_3217994_2 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000006975 78.0
CMS3_k127_3221618_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003953 258.0
CMS3_k127_3221618_1 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000002629 160.0
CMS3_k127_3221618_2 Psort location CytoplasmicMembrane, score - - - 0.00000000001811 66.0
CMS3_k127_3227144_0 Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000000000000000000000000000000368 198.0
CMS3_k127_3227144_1 Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000002942 126.0
CMS3_k127_3227144_2 DAK2 domain fusion protein YloV K07030 - - 0.00000003111 57.0
CMS3_k127_3227144_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00009641 49.0
CMS3_k127_3229710_0 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 382.0
CMS3_k127_3229710_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000001075 234.0
CMS3_k127_3233255_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 385.0
CMS3_k127_3235033_0 trisaccharide binding K11912 - 2.7.11.1 0.0000000000000000000159 104.0
CMS3_k127_3237277_0 GtrA-like protein - - - 0.00000000000000001087 89.0
CMS3_k127_3237277_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000001431 85.0
CMS3_k127_3237277_2 response regulator K07670 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016310,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000007167 85.0
CMS3_k127_3239145_0 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000001315 227.0
CMS3_k127_3239145_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000003867 203.0
CMS3_k127_3239145_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000008562 130.0
CMS3_k127_3239145_3 Asp23 family, cell envelope-related function - - - 0.000000000000000001629 89.0
CMS3_k127_3239145_4 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000001693 59.0
CMS3_k127_3239145_5 X-Pro dipeptidyl-peptidase (S15 family) K06889,K07397 - - 0.000004013 57.0
CMS3_k127_3242708_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.237e-236 746.0
CMS3_k127_3242708_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 439.0
CMS3_k127_3242708_2 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000008639 158.0
CMS3_k127_3256683_0 Belongs to the GcvT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 501.0
CMS3_k127_3257837_0 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000003894 200.0
CMS3_k127_326426_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 330.0
CMS3_k127_326426_1 Acetyltransferase (GNAT) family - - - 0.00000000000000004189 87.0
CMS3_k127_3265209_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 292.0
CMS3_k127_3265209_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000002666 141.0
CMS3_k127_3269528_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000009048 162.0
CMS3_k127_3269528_1 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000005158 115.0
CMS3_k127_3270818_0 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000006354 221.0
CMS3_k127_3270818_1 Domain of unknown function DUF11 K13735 - - 0.0004311 48.0
CMS3_k127_3271947_0 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.0000000000000000000000000000000000016 154.0
CMS3_k127_3273477_0 Mu-like prophage major head subunit gpT - - - 0.000000000000000000000000000000000000000000000000000004989 213.0
CMS3_k127_3276809_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.234e-216 688.0
CMS3_k127_3276809_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000001024 239.0
CMS3_k127_3276809_2 domain, Protein K01727,K08961,K19049 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006029,GO:0006082,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009987,GO:0016829,GO:0016835,GO:0016837,GO:0019538,GO:0030203,GO:0030204,GO:0030207,GO:0030340,GO:0030341,GO:0033999,GO:0042597,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044273,GO:0044281,GO:0044464,GO:0050654,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903510 4.2.2.1,4.2.2.20,4.2.2.21,4.2.2.5 0.0000000002407 71.0
CMS3_k127_3276809_3 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.0001356 53.0
CMS3_k127_3281323_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000003328 242.0
CMS3_k127_3281323_1 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000000000000000000000006588 188.0
CMS3_k127_3281323_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000002023 77.0
CMS3_k127_3282416_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009496 370.0
CMS3_k127_3282416_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 293.0
CMS3_k127_3282416_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 287.0
CMS3_k127_3282416_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001046 276.0
CMS3_k127_3282416_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000006049 198.0
CMS3_k127_3282416_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000003186 184.0
CMS3_k127_3282416_6 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000001887 170.0
CMS3_k127_3282416_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001108 162.0
CMS3_k127_3282416_8 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000138 78.0
CMS3_k127_3282416_9 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000004554 67.0
CMS3_k127_3282729_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000001266 203.0
CMS3_k127_3282729_1 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000005399 197.0
CMS3_k127_3282729_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000003298 184.0
CMS3_k127_3282729_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000003123 113.0
CMS3_k127_3283309_0 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03546,K03547 - - 0.0000000000000000000000000000000000000000000000000000000008175 212.0
CMS3_k127_3283309_1 Rad50 zinc hook motif K03546 - - 0.000000000000000000002035 94.0
CMS3_k127_3288824_0 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 343.0
CMS3_k127_3288824_1 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000001319 265.0
CMS3_k127_3288824_2 TIGRFAM metal dependent phophohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007273 253.0
CMS3_k127_3288824_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000002097 226.0
CMS3_k127_3288824_4 - - - - 0.000000000000000000000000000000000000000003446 170.0
CMS3_k127_3288824_5 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000003337 141.0
CMS3_k127_3288824_6 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000002674 129.0
CMS3_k127_3288824_7 Histidine Phosphotransfer domain - - - 0.00000000000000000001557 97.0
CMS3_k127_3288824_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000009071 86.0
CMS3_k127_3288824_9 Histidine kinase - - - 0.0000000000000006585 82.0
CMS3_k127_3289529_0 MASE1 - - - 0.00000000000007435 82.0
CMS3_k127_3291570_0 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000005376 213.0
CMS3_k127_3291570_1 GrpB protein - - - 0.00000000000000000000000000000000000000000000124 171.0
CMS3_k127_3304059_0 Belongs to the GcvT family K00315 - 1.5.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 592.0
CMS3_k127_3305442_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 569.0
CMS3_k127_3305442_1 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000001952 223.0
CMS3_k127_3305442_2 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.0000000000000369 72.0
CMS3_k127_3308895_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000003961 239.0
CMS3_k127_3308895_1 aspartic-type endopeptidase activity K02236,K02506,K02654 - 3.4.23.43 0.000000000000000005648 94.0
CMS3_k127_3319854_0 Metallo-beta-lactamase superfamily domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 582.0
CMS3_k127_3328823_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001021 276.0
CMS3_k127_3333005_0 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005439 238.0
CMS3_k127_3333005_1 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000001337 202.0
CMS3_k127_3342741_0 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 3.648e-209 658.0
CMS3_k127_3342741_1 Spermidine putrescine ABC transporter substrate-binding protein K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 611.0
CMS3_k127_3342741_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 452.0
CMS3_k127_3366763_0 PFAM AAA-4 family protein K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 415.0
CMS3_k127_3366950_0 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 480.0
CMS3_k127_3366950_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000005099 244.0
CMS3_k127_3369784_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 465.0
CMS3_k127_3369784_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000001953 169.0
CMS3_k127_3369784_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0001071 44.0
CMS3_k127_3371198_0 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 302.0
CMS3_k127_3371198_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000004844 237.0
CMS3_k127_3371198_10 Phosphoethanolamine methyltransferase K05929 - 2.1.1.103 0.000002066 54.0
CMS3_k127_3371198_11 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0002687 53.0
CMS3_k127_3371198_12 His Kinase A (phosphoacceptor) domain - - - 0.0004789 52.0
CMS3_k127_3371198_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000003111 205.0
CMS3_k127_3371198_3 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000005681 216.0
CMS3_k127_3371198_4 PFAM response regulator receiver - - - 0.000000000000000000000000000000000006379 139.0
CMS3_k127_3371198_5 phosphorelay sensor kinase activity K01768,K02482,K02584,K07673,K10819 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000000000162 148.0
CMS3_k127_3371198_6 - - - - 0.000000000000000000000000000001262 130.0
CMS3_k127_3371198_7 - - - - 0.000000000000000000000000000003289 129.0
CMS3_k127_3371198_8 PhoQ Sensor - - - 0.000000000000006167 88.0
CMS3_k127_3371198_9 GAF domain - - - 0.0000009233 63.0
CMS3_k127_3387640_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 512.0
CMS3_k127_3387640_1 epimerase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 379.0
CMS3_k127_3387640_2 4-hydroxybenzoate polyprenyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001929 271.0
CMS3_k127_3387640_3 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000000005455 189.0
CMS3_k127_3391481_0 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000001297 131.0
CMS3_k127_3391481_1 Pfam Transposase K07483 - - 0.0006633 47.0
CMS3_k127_3395460_0 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 328.0
CMS3_k127_3395460_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000002136 200.0
CMS3_k127_3395460_2 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000002275 102.0
CMS3_k127_3395460_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000005083 98.0
CMS3_k127_3396474_0 PFAM CBS domain - - - 0.000000000000000000000000000000000415 135.0
CMS3_k127_3396474_1 hydrolase activity, acting on ester bonds K01055,K02014 - 3.1.1.24 0.000000000000000000000000000002366 128.0
CMS3_k127_3396474_2 Putative esterase - - - 0.00000000000000000000000000001848 128.0
CMS3_k127_3396474_3 Protein of unknown function (DUF429) - - - 0.0000000000000000000000000001354 124.0
CMS3_k127_3396474_4 Phage integrase family - - - 0.00000001249 59.0
CMS3_k127_3396517_0 COG2041 Sulfite oxidase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000001366 208.0
CMS3_k127_3396517_1 AraC-like ligand binding domain - - - 0.000000000000000000000001447 107.0
CMS3_k127_3396517_2 acetyltransferase K17840 - 2.3.1.59 0.000000000000000002035 88.0
CMS3_k127_3396517_3 DNA adenine methylase K06223 - 2.1.1.72 0.00006711 46.0
CMS3_k127_3399178_0 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001645 274.0
CMS3_k127_3399178_1 nuclear chromosome segregation - - - 0.00000000000000000001924 104.0
CMS3_k127_3399353_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 511.0
CMS3_k127_3413245_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 328.0
CMS3_k127_3413245_1 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000004706 170.0
CMS3_k127_3416952_0 PFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000002163 247.0
CMS3_k127_3424774_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001461 265.0
CMS3_k127_3425568_0 4Fe-4S dicluster domain - - - 1.272e-230 732.0
CMS3_k127_3425568_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 309.0
CMS3_k127_3425568_2 electron transfer activity K03521 - - 0.000000000000000000000000000000000000000000000000000000000004617 218.0
CMS3_k127_3425568_3 PFAM Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000998 199.0
CMS3_k127_3425568_4 - - - - 0.000000000000009825 78.0
CMS3_k127_3426015_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 1.315e-219 691.0
CMS3_k127_3426015_1 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 374.0
CMS3_k127_3426780_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.2e-218 698.0
CMS3_k127_3426780_1 histidine kinase dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000004649 234.0
CMS3_k127_3426780_2 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000000000000000000000000000000000000000000000000007837 220.0
CMS3_k127_342786_0 Late control gene D protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002164 227.0
CMS3_k127_342786_1 Rhs element vgr protein - - - 0.00000000000000000000000000000000000000000000000000008839 193.0
CMS3_k127_342786_2 GPW Gp25 family protein - - - 0.000000000000000000000000000003221 124.0
CMS3_k127_342786_3 Baseplate J-like protein - - - 0.0000002499 53.0
CMS3_k127_3428303_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 544.0
CMS3_k127_3428303_1 phosphatidylinositol kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001572 266.0
CMS3_k127_3428303_2 alpha-ribazole phosphatase activity K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000003332 232.0
CMS3_k127_3428303_3 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000000000000000234 155.0
CMS3_k127_3428303_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000009271 149.0
CMS3_k127_3431249_0 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 492.0
CMS3_k127_3431249_1 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 328.0
CMS3_k127_3431249_2 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000167 253.0
CMS3_k127_3431249_3 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000000000000000000000000000000001114 195.0
CMS3_k127_3431249_4 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.000000000000000000000000000000000009865 144.0
CMS3_k127_3431249_5 Thioesterase superfamily protein - - - 0.00000000000000000000000001856 112.0
CMS3_k127_3433090_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000005437 196.0
CMS3_k127_3433090_1 - K01992 - - 0.000000000000000000000000000000000000000000000000001694 195.0
CMS3_k127_3433090_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000151 133.0
CMS3_k127_3438095_0 membrane protein involved in D-alanine K19294 - - 0.0000000000000000000000000000000000000000000000000000000000000000862 236.0
CMS3_k127_3441804_0 Heat shock 70 kDa protein K04043 - - 9.652e-276 860.0
CMS3_k127_3441804_1 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000005687 215.0
CMS3_k127_3441804_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000849 116.0
CMS3_k127_3441804_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000006106 112.0
CMS3_k127_3459707_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000002526 155.0
CMS3_k127_3459707_1 PFAM Bacterial regulatory proteins, crp family K10914 - - 0.0000000000000001103 94.0
CMS3_k127_3459707_2 HEAT repeats - - - 0.00000000000005001 86.0
CMS3_k127_3460270_0 Histidine kinase - - - 0.000000000000000000000000000000001617 143.0
CMS3_k127_3460650_0 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.00000000000000000000000000000000000000007818 172.0
CMS3_k127_3464948_0 PFAM O-antigen polymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 328.0
CMS3_k127_3464948_1 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.00000000000000000000000008083 112.0
CMS3_k127_3464948_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.00000000001635 70.0
CMS3_k127_3464948_3 Beta-lactamase enzyme family - - - 0.0000000001202 65.0
CMS3_k127_3464948_4 membrane - - - 0.00001506 49.0
CMS3_k127_3471898_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 2.194e-208 656.0
CMS3_k127_3473073_0 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 394.0
CMS3_k127_3473073_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000001667 185.0
CMS3_k127_3473073_2 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000003489 111.0
CMS3_k127_3476904_0 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000001566 145.0
CMS3_k127_3476904_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000005272 102.0
CMS3_k127_3482805_0 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 291.0
CMS3_k127_3482805_1 PFAM acyl-CoA dehydrogenase domain protein K00255,K11731 - 1.3.8.8 0.000000000000000000000000000000000000000000000000000000000000004444 218.0
CMS3_k127_3484042_0 PFAM LmbE family protein K18455 - 3.5.1.115 0.0000000000000000000000000000000000000000000000000000000000000000001239 241.0
CMS3_k127_3484042_1 ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000001084 195.0
CMS3_k127_3484042_2 serine threonine protein kinase - - - 0.000001102 59.0
CMS3_k127_3491289_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 299.0
CMS3_k127_3491289_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
CMS3_k127_3491289_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000004533 55.0
CMS3_k127_3503057_0 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000002644 190.0
CMS3_k127_3503057_1 Pfam:DUF59 K02612 - - 0.0000000000000000000000001005 109.0
CMS3_k127_3503057_2 Ester cyclase - - - 0.00000000000000000000271 98.0
CMS3_k127_3503057_3 SnoaL-like polyketide cyclase K06893 - - 0.00000000000000003858 86.0
CMS3_k127_350460_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000002489 192.0
CMS3_k127_350460_1 - - - - 0.0000002747 55.0
CMS3_k127_3506946_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 305.0
CMS3_k127_3506946_1 Mediates influx of magnesium ions K03284 - - 0.00006845 52.0
CMS3_k127_350775_0 Domain of unknown function DUF11 - - - 0.0001782 52.0
CMS3_k127_3527412_0 ATPase AAA-2 domain protein K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008746 280.0
CMS3_k127_3527412_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000001918 177.0
CMS3_k127_353042_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000003356 184.0
CMS3_k127_353042_1 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000008438 127.0
CMS3_k127_353042_2 Belongs to the UPF0109 family K06960 - - 0.00000000000000000001928 94.0
CMS3_k127_3534466_0 PFAM single-stranded nucleic acid binding R3H domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 613.0
CMS3_k127_3534466_1 beta-glucosidase activity K05350,K21000 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 457.0
CMS3_k127_3534466_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 305.0
CMS3_k127_3534466_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000005403 232.0
CMS3_k127_3535188_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1060.0
CMS3_k127_3544814_0 Molybdopterin oxidoreductase Fe4S4 domain K00370 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 561.0
CMS3_k127_3548399_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 9.869e-235 748.0
CMS3_k127_3548399_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000006803 145.0
CMS3_k127_354964_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000002257 256.0
CMS3_k127_354964_1 MFS_1 like family K08151,K08153 - - 0.0000000000000000000000000000000000000000000000000000000000000001448 237.0
CMS3_k127_354964_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000007312 188.0
CMS3_k127_354964_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001973 186.0
CMS3_k127_3549641_0 - - - - 0.000000000000000000000000000000000000004011 151.0
CMS3_k127_3549641_1 - - - - 0.000000000000000075 84.0
CMS3_k127_3549641_2 Mut7-C ubiquitin K03154 - - 0.0000000001082 65.0
CMS3_k127_3566308_0 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000009608 148.0
CMS3_k127_3566308_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000001583 116.0
CMS3_k127_3566308_2 efflux transmembrane transporter activity - - - 0.0000002983 61.0
CMS3_k127_3577405_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000001743 199.0
CMS3_k127_3577405_1 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000002472 190.0
CMS3_k127_3579912_0 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 287.0
CMS3_k127_3579912_1 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000008072 168.0
CMS3_k127_3579912_2 Domain of unknown function (DUF4395) - - - 0.0000000000000000000000000000000000000002563 154.0
CMS3_k127_3579912_3 ThiS family K03636 - - 0.000000000000000000000000001095 114.0
CMS3_k127_3579912_4 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000000274 117.0
CMS3_k127_3579912_5 COG0526, thiol-disulfide isomerase and thioredoxins K03671 - - 0.000000000000000000001866 100.0
CMS3_k127_3582168_0 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000002086 150.0
CMS3_k127_3582168_1 extracellular matrix structural constituent - - - 0.000000000000000000159 96.0
CMS3_k127_3582168_2 Anti-sigma-K factor rskA - - - 0.000000000000000001847 94.0
CMS3_k127_3583704_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.638e-274 859.0
CMS3_k127_3589080_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000002185 258.0
CMS3_k127_3589080_1 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000505 196.0
CMS3_k127_3589080_2 Fructosamine kinase - - - 0.00000000000000000000000000000000000004365 143.0
CMS3_k127_3589080_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000467 74.0
CMS3_k127_3589080_4 Forkhead associated domain - - - 0.000000004888 68.0
CMS3_k127_3592526_0 PFAM aminoglycoside phosphotransferase K18844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001096 271.0
CMS3_k127_3592526_1 TIGRFAM MazG family protein K02499 - - 0.0000000000000000000000000000000000000001082 157.0
CMS3_k127_3592526_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000003991 60.0
CMS3_k127_3595009_0 short-chain dehydrogenase reductase SDR K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 354.0
CMS3_k127_3595009_1 PFAM glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005499 276.0
CMS3_k127_3595009_2 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004834 271.0
CMS3_k127_3595009_3 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001217 249.0
CMS3_k127_3595009_4 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000002065 120.0
CMS3_k127_3595009_5 Uncharacterized conserved protein (DUF2304) K09153 - - 0.00000000000241 72.0
CMS3_k127_3598060_0 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 288.0
CMS3_k127_3598060_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.000000000000000000000000000000000000000000003744 168.0
CMS3_k127_3607704_0 peptidase dimerisation domain protein K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 344.0
CMS3_k127_3607704_1 NUDIX domain - - - 0.00000000000000000000000000000004893 133.0
CMS3_k127_3607704_2 - - - - 0.0000000000000000000000000002332 116.0
CMS3_k127_3607704_3 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000000003367 85.0
CMS3_k127_3611501_0 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 410.0
CMS3_k127_3611501_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002052 257.0
CMS3_k127_3611501_2 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000003095 242.0
CMS3_k127_3611501_3 branched-chain amino acid K01995,K11957 - - 0.0000000000000000000002259 98.0
CMS3_k127_3617293_0 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000002242 161.0
CMS3_k127_3617293_1 PFAM Sporulation domain protein - - - 0.00000000000002041 79.0
CMS3_k127_3623835_0 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001022 268.0
CMS3_k127_3626485_0 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000002918 252.0
CMS3_k127_3640526_0 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 302.0
CMS3_k127_3640526_1 - - - - 0.0000000000000000000000000000000000000000000000000001409 191.0
CMS3_k127_3640526_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000009809 74.0
CMS3_k127_3644421_0 PFAM ComEC Rec2-related protein K02238 - - 0.0000000000004235 76.0
CMS3_k127_3648411_0 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 467.0
CMS3_k127_3649604_0 Radical SAM superfamily K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000001711 227.0
CMS3_k127_3649604_1 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000000000000002974 159.0
CMS3_k127_3651236_0 TIGRFAM arsenite-activated ATPase ArsA K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 396.0
CMS3_k127_3651236_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 376.0
CMS3_k127_3651236_2 Penicillin binding protein transpeptidase domain K05364 - - 0.000000000000000000000000000000000000000000000000004188 197.0
CMS3_k127_366765_0 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 390.0
CMS3_k127_366765_1 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000001111 160.0
CMS3_k127_366765_2 Belongs to the HesB IscA family K13628,K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055114,GO:0071704,GO:0071840,GO:0071944,GO:1901564 - 0.000000000000000000000000000000000004942 141.0
CMS3_k127_366765_3 DeoR-like helix-turn-helix domain - - - 0.000000000000000000000000667 112.0
CMS3_k127_366765_4 - - - - 0.00001543 51.0
CMS3_k127_3668110_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000001053 160.0
CMS3_k127_3668110_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000001003 145.0
CMS3_k127_3668110_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000002296 144.0
CMS3_k127_3668110_3 CHASE3 domain - - - 0.00000000000000000000001403 119.0
CMS3_k127_3668110_4 HD domain - - - 0.00001223 59.0
CMS3_k127_3675151_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000002018 158.0
CMS3_k127_3680674_0 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 381.0
CMS3_k127_3680674_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000003836 204.0
CMS3_k127_3680674_2 transferase activity, transferring glycosyl groups K12994 - 2.4.1.349 0.0000000000000000000000000002812 116.0
CMS3_k127_3681571_0 Belongs to the 'phage' integrase family - - - 0.00003593 53.0
CMS3_k127_3687446_0 DNA helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 306.0
CMS3_k127_3687736_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 391.0
CMS3_k127_3687736_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000003655 233.0
CMS3_k127_3687736_2 Formyl transferase K00604,K11175 - 2.1.2.2,2.1.2.9 0.00000000000000000000000000000000000000000000000000000000006321 214.0
CMS3_k127_3687736_3 PFAM OsmC family protein K07397 - - 0.00000000000000000000000000000000009187 138.0
CMS3_k127_3688625_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 319.0
CMS3_k127_3688625_1 transcriptional regulator - - - 0.0001124 46.0
CMS3_k127_3706506_0 Beta-lactamase enzyme family - - - 0.000000000000000002439 94.0
CMS3_k127_3706506_1 Belongs to the Nudix hydrolase family - - - 0.0000000000000003512 84.0
CMS3_k127_3706506_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000228 50.0
CMS3_k127_3707453_0 Acetolactate synthase, large subunit K01652 - 2.2.1.6 5.64e-243 762.0
CMS3_k127_3707453_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 381.0
CMS3_k127_3707453_2 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000003559 203.0
CMS3_k127_3707453_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000007247 162.0
CMS3_k127_370936_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003441 274.0
CMS3_k127_3710549_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 341.0
CMS3_k127_3710549_1 PFAM regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000003066 169.0
CMS3_k127_3710549_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000001729 171.0
CMS3_k127_3710549_3 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000009333 126.0
CMS3_k127_3713697_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 383.0
CMS3_k127_3713697_1 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007119 269.0
CMS3_k127_3722976_0 Peptidase family M28 - - - 0.00000000000000000000000000000000001546 147.0
CMS3_k127_3727108_0 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
CMS3_k127_3727108_1 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000002306 76.0
CMS3_k127_3738283_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 501.0
CMS3_k127_3740183_0 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000174 75.0
CMS3_k127_3755576_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 404.0
CMS3_k127_3755576_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000004883 225.0
CMS3_k127_376092_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000001623 190.0
CMS3_k127_376092_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000254 140.0
CMS3_k127_376092_2 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000005133 121.0
CMS3_k127_3761210_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 617.0
CMS3_k127_3769976_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000172 68.0
CMS3_k127_3797968_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 445.0
CMS3_k127_3797968_1 Acetyltransferase (GNAT) domain - - - 0.00000001056 61.0
CMS3_k127_3799443_0 hydroperoxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009172 354.0
CMS3_k127_3799443_1 Glycoside-hydrolase family GH114 K01884 - 6.1.1.16 0.000000000000000000000000000000000000000000000000001982 191.0
CMS3_k127_3799443_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000005533 109.0
CMS3_k127_3800448_0 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 325.0
CMS3_k127_3800448_1 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000000000000002495 196.0
CMS3_k127_3821095_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 9.644e-268 835.0
CMS3_k127_3821095_1 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001328 268.0
CMS3_k127_3821095_2 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000001757 212.0
CMS3_k127_3841490_0 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000008599 234.0
CMS3_k127_3841490_1 Arsenical pump membrane protein - - - 0.00000000000000000000000000005319 126.0
CMS3_k127_384993_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 2.516e-242 760.0
CMS3_k127_3851135_0 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000002858 161.0
CMS3_k127_3851135_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000003382 107.0
CMS3_k127_3851135_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000008654 88.0
CMS3_k127_385861_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000005081 226.0
CMS3_k127_385861_1 YbbR-like protein - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.00001053 55.0
CMS3_k127_3862907_0 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 1.609e-236 747.0
CMS3_k127_3862907_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 303.0
CMS3_k127_3862907_2 Acetyltransferases including N-acetylases of ribosomal proteins - - - 0.00000000000000008707 82.0
CMS3_k127_3863004_0 - - - - 0.0000000000000000000009649 105.0
CMS3_k127_3864952_0 peptidase activity - - - 0.000000000000000000001775 107.0
CMS3_k127_3869172_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000002512 118.0
CMS3_k127_3869679_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.918e-298 931.0
CMS3_k127_3869679_1 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 492.0
CMS3_k127_3869679_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 385.0
CMS3_k127_3869679_3 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 330.0
CMS3_k127_3872129_0 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 329.0
CMS3_k127_3872129_1 Belongs to the UPF0311 family - - - 0.0000000000000000000000000000000000005125 144.0
CMS3_k127_3872129_2 glyoxalase III activity - - - 0.0000000000000000000000000000000002993 143.0
CMS3_k127_3872129_3 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.00000000002385 64.0
CMS3_k127_3872129_4 Helix-turn-helix domain - - - 0.0000001054 55.0
CMS3_k127_3872457_0 penicillin amidase K01434 - 3.5.1.11 1.271e-241 773.0
CMS3_k127_3872457_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000004725 246.0
CMS3_k127_3872457_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000001531 87.0
CMS3_k127_3872457_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000002762 64.0
CMS3_k127_3872457_4 HAD-hyrolase-like K01560,K07025 - 3.8.1.2 0.000877 44.0
CMS3_k127_3872531_0 Adenylosuccinate lyase C-terminus K01857 - 5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 364.0
CMS3_k127_3872531_1 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 363.0
CMS3_k127_3873980_0 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000001589 166.0
CMS3_k127_3873980_1 nUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000004213 158.0
CMS3_k127_3873980_2 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000000000000000001042 121.0
CMS3_k127_3873980_3 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.000000000000002254 84.0
CMS3_k127_3901236_0 PFAM Translin K07477 - - 0.0000000000000000000000000000000000000000000000000005829 190.0
CMS3_k127_3901236_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000004722 166.0
CMS3_k127_3901236_2 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.000000000000005883 78.0
CMS3_k127_3901236_3 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000007478 58.0
CMS3_k127_3901236_4 - - - - 0.00000004563 59.0
CMS3_k127_3904133_0 PFAM RNA binding S1 domain protein - - - 0.0000000000000000000000000000000000001264 149.0
CMS3_k127_3904133_1 VKc - - - 0.0000000000000000000000508 104.0
CMS3_k127_3904133_2 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000003175 61.0
CMS3_k127_3914105_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 404.0
CMS3_k127_3914105_1 POTRA domain, FtsQ-type K03589 - - 0.0000000000005623 77.0
CMS3_k127_3916103_0 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000005455 192.0
CMS3_k127_3916103_1 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000005509 65.0
CMS3_k127_3918066_0 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 1.401e-229 730.0
CMS3_k127_3918066_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 7.005e-205 647.0
CMS3_k127_3918066_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 475.0
CMS3_k127_3918066_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 461.0
CMS3_k127_3918066_4 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 468.0
CMS3_k127_3918066_5 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001713 246.0
CMS3_k127_3918066_6 V4R - - - 0.0000000003052 68.0
CMS3_k127_392147_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 582.0
CMS3_k127_392147_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 532.0
CMS3_k127_392147_2 TIGRFAM FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 413.0
CMS3_k127_392147_3 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000000000000000000000000005196 172.0
CMS3_k127_392147_4 of nitrite reductase and ring-hydroxylating K05710 - - 0.0000000000000000000000000000008684 123.0
CMS3_k127_392147_5 PBS lyase HEAT-like repeat - - - 0.0001393 52.0
CMS3_k127_3926678_0 GXGXG motif - - - 0.000000000000000000000000000000000000000002135 162.0
CMS3_k127_3926678_1 DinB family - - - 0.0000000000000000000000000000000000004619 145.0
CMS3_k127_3927398_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001182 271.0
CMS3_k127_3927398_1 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000336 136.0
CMS3_k127_3930621_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000004221 147.0
CMS3_k127_3941532_0 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000636 283.0
CMS3_k127_3941532_1 - - - - 0.0000000000107 72.0
CMS3_k127_3944966_0 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000006386 148.0
CMS3_k127_3945676_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000001051 192.0
CMS3_k127_3945676_1 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000002566 181.0
CMS3_k127_3954484_0 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 439.0
CMS3_k127_3954484_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000002094 169.0
CMS3_k127_3954484_2 Peptidase dimerisation domain - - - 0.0000000000000000000000002434 112.0
CMS3_k127_3961328_0 - - - - 0.00000000001829 76.0
CMS3_k127_3964118_0 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000009656 194.0
CMS3_k127_3964118_1 Putative ATPase subunit of terminase (gpP-like) - - - 0.000000005712 57.0
CMS3_k127_3964853_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 327.0
CMS3_k127_3964853_1 CAAX protease self-immunity - - - 0.00000000000000000000000000000004888 126.0
CMS3_k127_3979812_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000003973 130.0
CMS3_k127_3981194_0 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005031 283.0
CMS3_k127_3982220_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001275 249.0
CMS3_k127_3982220_1 PhoQ Sensor - - - 0.00000000000000000000000000002185 123.0
CMS3_k127_3989435_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 347.0
CMS3_k127_3989435_1 Ig-like domain from next to BRCA1 gene K17987 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005829,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016043,GO:0016236,GO:0022607,GO:0031410,GO:0031982,GO:0032182,GO:0034622,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0051258,GO:0051259,GO:0061919,GO:0065003,GO:0071840,GO:0097708 - 0.00000000000000002447 89.0
CMS3_k127_3994894_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000005666 183.0
CMS3_k127_3994894_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000002123 91.0
CMS3_k127_3997292_0 CobQ CobB MinD ParA nucleotide binding domain K08253,K16554,K16692 - 2.7.10.2 0.00000000000000000000000000000000000000000000000001663 184.0
CMS3_k127_3997292_1 Lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000713 119.0
CMS3_k127_3997292_2 PFAM lipopolysaccharide biosynthesis protein - - - 0.000000000000000000007216 100.0
CMS3_k127_3997292_3 Belongs to the UPF0276 family K09930 - - 0.000000005186 66.0
CMS3_k127_4007399_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001377 275.0
CMS3_k127_4007399_1 - - - - 0.00000000000001093 80.0
CMS3_k127_4008942_0 Domain of unknown function (DUF1998) K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 518.0
CMS3_k127_4013147_0 CAAX protease self-immunity - - - 0.0000000000000000000000000002091 124.0
CMS3_k127_4013147_1 Histidine kinase - - - 0.00002338 53.0
CMS3_k127_4018899_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000004241 183.0
CMS3_k127_4018899_1 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000001057 154.0
CMS3_k127_403176_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.199e-301 934.0
CMS3_k127_4038342_0 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000004525 232.0
CMS3_k127_4038342_1 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000003215 140.0
CMS3_k127_4038342_2 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000002537 116.0
CMS3_k127_4038342_3 WD domain, G-beta repeat - - - 0.00000599 56.0
CMS3_k127_4042778_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 326.0
CMS3_k127_4042778_1 PFAM Methyltransferase type - - - 0.00000000000000000000000000000000000000000004055 171.0
CMS3_k127_4042778_2 enoyl-CoA hydratase isomerase K01715 - 4.2.1.17 0.000005658 49.0
CMS3_k127_4053029_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 486.0
CMS3_k127_4053029_1 Glycosyltransferase like family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.00000000000000000000000000000000000000000000000003189 190.0
CMS3_k127_4053029_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000001604 131.0
CMS3_k127_4053029_3 Domain of unknown function (DUF2088) - - - 0.000000000000000000114 93.0
CMS3_k127_4053029_4 sigma-54 factor interaction domain-containing protein - - - 0.0009272 47.0
CMS3_k127_4054072_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004943 287.0
CMS3_k127_4054072_1 - - - - 0.000000000000002827 79.0
CMS3_k127_4054072_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000002999 77.0
CMS3_k127_4054669_0 Pentapeptide repeats (9 copies) - - - 0.00001386 53.0
CMS3_k127_4054669_1 PFAM Pentapeptide repeats (8 copies) - - - 0.00002938 53.0
CMS3_k127_4056497_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.914e-310 971.0
CMS3_k127_4056497_1 acetamidase formamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 329.0
CMS3_k127_4056497_2 Protein of unknown function (DUF4230) - - - 0.000000000000000000000000000000001243 138.0
CMS3_k127_4065689_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 355.0
CMS3_k127_4065689_1 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000004374 181.0
CMS3_k127_4065689_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000001409 65.0
CMS3_k127_4071452_0 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 407.0
CMS3_k127_4071452_1 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601,K08965 - 4.1.1.39,5.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 287.0
CMS3_k127_4074278_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.288e-277 867.0
CMS3_k127_4074278_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 344.0
CMS3_k127_4074278_2 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 301.0
CMS3_k127_4074278_3 PFAM formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000003663 241.0
CMS3_k127_4074278_4 Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase K01601 - 4.1.1.39 0.00000000000000000000000000000000000002451 147.0
CMS3_k127_4078625_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 295.0
CMS3_k127_4078625_1 alcohol dehydrogenase K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000002154 128.0
CMS3_k127_4084368_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000004296 176.0
CMS3_k127_4084368_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.0000000001455 62.0
CMS3_k127_4087596_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000002706 133.0
CMS3_k127_4087596_1 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000002133 119.0
CMS3_k127_409882_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 370.0
CMS3_k127_4103559_0 PFAM glycosyl transferase, family 51 - - - 8.696e-274 873.0
CMS3_k127_4103559_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004023 271.0
CMS3_k127_4103559_2 DNA-templated transcription, initiation K03088,K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000004264 240.0
CMS3_k127_4103559_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000002637 143.0
CMS3_k127_4103559_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000008292 85.0
CMS3_k127_4103559_5 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000001806 60.0
CMS3_k127_4104805_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001978 282.0
CMS3_k127_4104805_1 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000002923 153.0
CMS3_k127_4110182_0 o-methyltransferase K21377 - 2.1.1.302 0.0000000000000000000258 100.0
CMS3_k127_4110182_1 oligosaccharyl transferase activity - - - 0.00006664 48.0
CMS3_k127_4121555_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 543.0
CMS3_k127_4121555_1 Tetratricopeptide repeat - - - 0.000004541 57.0
CMS3_k127_4122109_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000001036 228.0
CMS3_k127_4122109_1 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000006888 117.0
CMS3_k127_4130212_0 Histidine kinase - - - 0.0000000000000000000000004269 117.0
CMS3_k127_4133777_0 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000002789 196.0
CMS3_k127_4133777_1 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000002974 151.0
CMS3_k127_4133777_2 peptidase - - - 0.000000000004482 77.0
CMS3_k127_4133777_3 ubiE/COQ5 methyltransferase family - - - 0.0000000001797 67.0
CMS3_k127_4135990_0 transposase activity - - - 0.0000000000000000000000000000000000000000000000002212 190.0
CMS3_k127_4137212_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 2.171e-202 649.0
CMS3_k127_4137212_1 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000000000000000000001404 200.0
CMS3_k127_4137212_2 PFAM secretion protein HlyD family protein K01993 - - 0.0000000000000000000000000000000000000000000001963 184.0
CMS3_k127_4138412_0 Tetrapyrrole (Corrin/Porphyrin) Methylases K02428,K02499 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
CMS3_k127_4138412_1 Phage integrase, N-terminal SAM-like domain - - - 0.0008562 43.0
CMS3_k127_4168009_0 Molybdopterin oxidoreductase Fe4S4 domain K00370 - 1.7.5.1 9.081e-234 731.0
CMS3_k127_4168009_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000001739 208.0
CMS3_k127_4173658_0 - - - - 0.000000000000000000000000000000002148 134.0
CMS3_k127_4180633_0 3-methyladenine DNA glycosylase - - - 0.000000000000000000000041 105.0
CMS3_k127_4180633_1 Thioredoxin-like - - - 0.00000000000000000004491 96.0
CMS3_k127_4191171_0 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000000000001482 217.0
CMS3_k127_4191171_1 Branched-chain amino acid transport protein (AzlD) - - - 0.0000000000000000000003296 99.0
CMS3_k127_4192133_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 323.0
CMS3_k127_4192133_1 Belongs to the peptidase M24B family K01271,K01274 - 3.4.13.9 0.000000000000000000000000000000004809 132.0
CMS3_k127_419392_0 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000002097 120.0
CMS3_k127_419392_1 PFAM Rieske 2Fe-2S domain protein K02636 - 1.10.9.1 0.0000000000000002567 80.0
CMS3_k127_4197626_0 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 349.0
CMS3_k127_4197626_1 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000003352 248.0
CMS3_k127_4197626_2 von Willebrand factor type A domain - - - 0.0000000000000000000000000000000000000000000000000000001198 201.0
CMS3_k127_4200507_0 metal-dependent phosphohydrolase, HD sub domain K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 380.0
CMS3_k127_4202901_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 454.0
CMS3_k127_4202901_1 Phosphodiester glycosidase - - - 0.00000000000000000000001017 113.0
CMS3_k127_4203703_0 YqeY-like protein K09117 - - 0.0000000000000000000000000000000000001576 147.0
CMS3_k127_4203703_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.0001728 51.0
CMS3_k127_4204456_0 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009302 441.0
CMS3_k127_4207631_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000008473 143.0
CMS3_k127_4207631_1 - - - - 0.00000006584 62.0
CMS3_k127_4207631_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0004606 53.0
CMS3_k127_4211650_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000006995 146.0
CMS3_k127_4211650_1 membrane - - - 0.0000000006108 70.0
CMS3_k127_4233457_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000208 211.0
CMS3_k127_4241472_0 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000003572 257.0
CMS3_k127_4241472_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000004144 222.0
CMS3_k127_4241472_2 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000000001372 163.0
CMS3_k127_4241472_3 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000000001836 134.0
CMS3_k127_4241472_4 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000001946 139.0
CMS3_k127_4241472_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000004881 116.0
CMS3_k127_4242012_0 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005415 264.0
CMS3_k127_4249118_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000002139 211.0
CMS3_k127_4249118_1 response regulator receiver K02479,K07692 - - 0.00000000000000000000000004683 110.0
CMS3_k127_4249386_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 492.0
CMS3_k127_4249386_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000007717 231.0
CMS3_k127_4249386_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000001097 59.0
CMS3_k127_4254831_0 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000001327 265.0
CMS3_k127_4254831_1 Response regulator, receiver K11443 - - 0.0000000000000000000001194 103.0
CMS3_k127_4254831_2 Histidine kinase - - - 0.000000000000000000749 93.0
CMS3_k127_4258429_0 amino acid transport K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002813 275.0
CMS3_k127_4258429_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000001407 177.0
CMS3_k127_4258429_2 Protein of unknown function (DUF3352) - - - 0.0000003408 63.0
CMS3_k127_4268974_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 301.0
CMS3_k127_4268974_1 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000002422 203.0
CMS3_k127_4271837_0 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000000000000004117 106.0
CMS3_k127_4271914_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 347.0
CMS3_k127_4274397_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.699e-241 753.0
CMS3_k127_4275607_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 411.0
CMS3_k127_4282703_0 Methyltransferase small domain K06219 - - 0.000000000000002719 80.0
CMS3_k127_4283874_0 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000002839 113.0
CMS3_k127_4289024_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 3.872e-244 766.0
CMS3_k127_4307474_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 451.0
CMS3_k127_4314012_0 PFAM sodium calcium exchanger membrane region K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 354.0
CMS3_k127_4314012_1 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000002026 125.0
CMS3_k127_432676_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1559.0
CMS3_k127_432676_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 1.203e-217 687.0
CMS3_k127_4327745_0 Domains REC, HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000003575 192.0
CMS3_k127_4327745_1 PAS fold - - - 0.0000000000704 65.0
CMS3_k127_4329298_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000002205 164.0
CMS3_k127_4329298_1 DDE superfamily endonuclease - - - 0.00000000000003256 73.0
CMS3_k127_4329298_2 WD domain, G-beta repeat K12132 - 2.7.11.1 0.000000000001151 80.0
CMS3_k127_4330650_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000257 221.0
CMS3_k127_4330650_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000001458 174.0
CMS3_k127_4330650_2 Related to alanyl-tRNA synthetase HxxxH domain K01872 GO:0002161,GO:0003674,GO:0003824,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 6.1.1.7 0.000000000000000000000000000000002256 140.0
CMS3_k127_4338210_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000194 236.0
CMS3_k127_43387_0 PFAM phenylacetic acid catabolic family protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000001071 244.0
CMS3_k127_43387_1 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000003678 179.0
CMS3_k127_43387_2 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000887 73.0
CMS3_k127_43387_3 - - - - 0.000000007603 59.0
CMS3_k127_43387_4 - - - - 0.0000001395 55.0
CMS3_k127_4339005_0 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000001005 237.0
CMS3_k127_4339005_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0002682,GO:0002683,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0031347,GO:0031348,GO:0034214,GO:0035821,GO:0040007,GO:0042802,GO:0043170,GO:0043207,GO:0043545,GO:0043933,GO:0044003,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044413,GO:0044414,GO:0044419,GO:0045088,GO:0045824,GO:0046483,GO:0048519,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0051832,GO:0051833,GO:0052031,GO:0052037,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0061799,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0075136,GO:0080134,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.00000000000000000000000000000000000000001696 154.0
CMS3_k127_4339005_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000008156 113.0
CMS3_k127_4341009_0 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 413.0
CMS3_k127_435955_0 ABC transporter K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 299.0
CMS3_k127_435955_1 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.00000000000000000000000000000000000000000000000000002104 193.0
CMS3_k127_435955_2 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000004034 126.0
CMS3_k127_4359705_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000003393 236.0
CMS3_k127_4359705_1 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000001832 106.0
CMS3_k127_4368820_0 FIST N domain - - - 0.0000000000000000000000000000000000004934 149.0
CMS3_k127_4369305_0 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000000000000000000000000009941 243.0
CMS3_k127_4369305_1 Cysteine-rich secretory protein family - - - 0.00000000000000000000000004777 115.0
CMS3_k127_4376859_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 602.0
CMS3_k127_4383092_0 PFAM PHP domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000003847 229.0
CMS3_k127_4385415_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 435.0
CMS3_k127_4387404_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 514.0
CMS3_k127_4387404_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 299.0
CMS3_k127_4387404_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 295.0
CMS3_k127_4390077_0 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000008981 223.0
CMS3_k127_4390077_1 HEAT repeats - - - 0.00000000000000000000000000161 121.0
CMS3_k127_4395156_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 402.0
CMS3_k127_4395156_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000001105 169.0
CMS3_k127_4396787_0 FAD linked oxidases, C-terminal domain - - - 1.347e-196 629.0
CMS3_k127_4396787_1 PFAM GCN5-related N-acetyltransferase K06976 - - 0.00000000000000000000000000174 113.0
CMS3_k127_4434445_0 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000009421 141.0
CMS3_k127_4434445_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000005473 120.0
CMS3_k127_4434445_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000002245 89.0
CMS3_k127_4437678_0 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000007779 86.0
CMS3_k127_4438325_0 Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000006064 122.0
CMS3_k127_4438325_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000004376 110.0
CMS3_k127_4438325_2 - - - - 0.0000002489 60.0
CMS3_k127_4438325_3 bacterial-type flagellum-dependent cell motility - - - 0.000001044 56.0
CMS3_k127_4439130_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000001027 239.0
CMS3_k127_4452462_0 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000000000000302 215.0
CMS3_k127_4452462_1 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000008388 156.0
CMS3_k127_4452462_2 TraM recognition site of TraD and TraG K03205 - - 0.00002238 55.0
CMS3_k127_4472805_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000000001826 178.0
CMS3_k127_4472805_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000003371 155.0
CMS3_k127_4472805_2 AntiSigma factor - - - 0.00000000001926 72.0
CMS3_k127_4477757_0 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000001073 244.0
CMS3_k127_448011_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 584.0
CMS3_k127_4483227_0 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000275 159.0
CMS3_k127_4483227_1 competence protein - - - 0.00000000000000000000000002432 115.0
CMS3_k127_4490979_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 8.634e-198 627.0
CMS3_k127_4490979_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 334.0
CMS3_k127_4490979_2 FAD binding domain - - - 0.000000000000000002612 86.0
CMS3_k127_4501227_0 GNAT family acetyltransferase - - - 0.00007782 54.0
CMS3_k127_4514281_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 320.0
CMS3_k127_4514281_1 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000001173 177.0
CMS3_k127_4516656_0 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002106 274.0
CMS3_k127_4527031_0 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 326.0
CMS3_k127_4527031_1 PFAM binding-protein-dependent transport systems inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001696 251.0
CMS3_k127_4527031_2 COG0665 Glycine D-amino acid oxidases (deaminating) K19191 - 1.5.3.19 0.000000000000000000000000000000000000000000000001345 177.0
CMS3_k127_4531434_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 488.0
CMS3_k127_4532832_0 Belongs to the HesB IscA family K13628,K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055114,GO:0071704,GO:0071840,GO:0071944,GO:1901564 - 0.0000000000000000000000000000000004332 135.0
CMS3_k127_4532832_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000002571 117.0
CMS3_k127_4532832_2 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000008838 105.0
CMS3_k127_4535869_0 pathogenesis K21471,K21687 - - 0.000000000000000000000000000000000000000000000000000000000000000001942 240.0
CMS3_k127_4535869_1 Protein of unknown function (DUF1706) - - - 0.0000000000000002301 86.0
CMS3_k127_4536704_0 PFAM Peptidase family M20 M25 M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 529.0
CMS3_k127_4536704_1 PFAM Peptidase family M20 M25 M40 - - - 0.000000000000000000000000003896 113.0
CMS3_k127_4536704_2 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000006667 114.0
CMS3_k127_4550912_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000001196 175.0
CMS3_k127_4552887_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001387 244.0
CMS3_k127_4552887_1 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000005376 159.0
CMS3_k127_4552887_2 cheY-homologous receiver domain - - - 0.000000000000000000000002262 103.0
CMS3_k127_4561822_0 SMART AAA ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 569.0
CMS3_k127_4561822_1 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000009403 166.0
CMS3_k127_4561822_2 Methyltransferase type 11 - - - 0.000004003 50.0
CMS3_k127_4561822_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.0005982 52.0
CMS3_k127_4564625_0 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000002627 111.0
CMS3_k127_4564625_1 SnoaL-like polyketide cyclase - - - 0.00000001255 62.0
CMS3_k127_4566951_0 aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 467.0
CMS3_k127_4567165_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.414e-241 766.0
CMS3_k127_4567165_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000005475 92.0
CMS3_k127_4567165_2 protein).. Source PGD - - - 0.000000000004516 73.0
CMS3_k127_4575204_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00001259 57.0
CMS3_k127_4575941_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 560.0
CMS3_k127_4575941_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000008713 57.0
CMS3_k127_4582037_0 DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 381.0
CMS3_k127_4582037_1 transposase activity K07483 - - 0.0000000000000000000000000000000000000000000001105 170.0
CMS3_k127_4586230_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000007676 123.0
CMS3_k127_4586230_1 SMART protein phosphatase 2C domain protein - - - 0.000000000453 72.0
CMS3_k127_4600808_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008634 273.0
CMS3_k127_4600808_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000005231 244.0
CMS3_k127_4600808_2 pilus assembly protein ATPase CpaF K02283 - - 0.00000000000000000000000000002281 136.0
CMS3_k127_4600808_3 Putative zincin peptidase - - - 0.000000000000000000003348 102.0
CMS3_k127_4600808_4 Type II/IV secretion system protein K02283 - - 0.000000000001965 80.0
CMS3_k127_4600808_5 - - - - 0.000002612 57.0
CMS3_k127_4609019_0 Phenol hydroxylase, C-terminal dimerisation domain K03380 - 1.14.13.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 403.0
CMS3_k127_4609019_1 PFAM diacylglycerol kinase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001498 254.0
CMS3_k127_4609019_2 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000003863 124.0
CMS3_k127_4609019_3 - - - - 0.000000000004174 72.0
CMS3_k127_4620668_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 507.0
CMS3_k127_4620668_1 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000001139 139.0
CMS3_k127_4624431_0 PFAM peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001972 281.0
CMS3_k127_4624431_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003583 251.0
CMS3_k127_4624431_2 GXGXG motif - - - 0.00000000000000000000000000000000000000000000003106 174.0
CMS3_k127_4624431_3 Protein of unknown function (DUF3105) - - - 0.000000000000000000000000000000009901 134.0
CMS3_k127_4624431_4 Belongs to the peptidase S8 family - - - 0.0000000000000000003856 99.0
CMS3_k127_4632148_0 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000007277 188.0
CMS3_k127_4632148_1 L,D-transpeptidase catalytic domain - - - 0.000009334 55.0
CMS3_k127_4639793_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 344.0
CMS3_k127_4639793_1 Transposase - - - 0.00003046 49.0
CMS3_k127_4642672_0 O-Antigen ligase - - - 0.00000000000000000000000000007125 121.0
CMS3_k127_4642672_1 HicB family K18843 - - 0.0000000000000005615 80.0
CMS3_k127_4642672_2 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000001521 71.0
CMS3_k127_4642672_3 AAA-like domain - - - 0.0000002055 58.0
CMS3_k127_4643910_0 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 314.0
CMS3_k127_4643910_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000006914 190.0
CMS3_k127_4643910_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000113 187.0
CMS3_k127_4647482_0 Cro/C1-type HTH DNA-binding domain - - - 0.000000273 57.0
CMS3_k127_4647482_1 TM2 domain - - - 0.000001723 57.0
CMS3_k127_4650708_0 protein serine/threonine phosphatase activity - - - 0.0000000000000000000000000000000002731 144.0
CMS3_k127_4650708_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000005983 72.0
CMS3_k127_4650803_0 V-type ATPase 116kDa subunit family K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 321.0
CMS3_k127_4666333_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 379.0
CMS3_k127_4671877_0 AAA-like domain K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 527.0
CMS3_k127_4671877_1 NurA - - - 0.0000000000000000001685 96.0
CMS3_k127_4671877_2 PFAM HAS barrel domain - - - 0.000000006179 64.0
CMS3_k127_4671877_3 - - - - 0.00001091 48.0
CMS3_k127_4675365_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 343.0
CMS3_k127_4675365_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000002915 209.0
CMS3_k127_4675365_2 - - - - 0.000000008631 57.0
CMS3_k127_4679560_0 NmrA-like family - - - 0.0000000000000000000000000002395 118.0
CMS3_k127_4679560_1 sh3 domain protein - - - 0.000000000000000000000005888 112.0
CMS3_k127_4694599_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.0000000000001337 78.0
CMS3_k127_4695814_0 N-terminal 7TM region of histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 357.0
CMS3_k127_4695814_1 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 339.0
CMS3_k127_4695814_2 acetyltransferase K06889,K19273 - - 0.00000000000000000000000002138 115.0
CMS3_k127_4696497_0 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 302.0
CMS3_k127_4696497_1 abc transporter atp-binding protein K01990,K09695 - - 0.0000000000000000000000000000000000000000002717 162.0
CMS3_k127_4711543_0 elongation factor Tu domain 2 protein K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 399.0
CMS3_k127_4724950_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000004945 216.0
CMS3_k127_4724950_1 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000001055 216.0
CMS3_k127_4724950_2 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000001722 123.0
CMS3_k127_47259_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000131 262.0
CMS3_k127_4742605_0 Terminase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 329.0
CMS3_k127_4742605_1 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000035 297.0
CMS3_k127_4745176_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007172 260.0
CMS3_k127_4745176_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004738 244.0
CMS3_k127_4745176_3 Pyridoxamine 5'-phosphate oxidase - - - 0.000003691 51.0
CMS3_k127_4746514_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008746 280.0
CMS3_k127_4746514_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000005866 222.0
CMS3_k127_4754107_0 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000005472 205.0
CMS3_k127_4754107_1 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000006803 191.0
CMS3_k127_4759435_0 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008042 264.0
CMS3_k127_4759435_1 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.0000000000000000000000000000000000000000000000001417 186.0
CMS3_k127_4764440_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000143 239.0
CMS3_k127_4764440_1 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.00000000000000000000000000000000000000000000000000000000000000000002649 240.0
CMS3_k127_4775949_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.229e-202 636.0
CMS3_k127_4775949_1 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000004478 174.0
CMS3_k127_4778132_0 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 340.0
CMS3_k127_4778132_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000003133 233.0
CMS3_k127_4778132_2 HD domain K18967 - 2.7.7.65 0.000000000000000000000000000001611 128.0
CMS3_k127_4778132_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000004897 128.0
CMS3_k127_4782719_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001107 261.0
CMS3_k127_4789422_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 301.0
CMS3_k127_4789422_1 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008819 278.0
CMS3_k127_4789422_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000003236 227.0
CMS3_k127_4789422_3 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000772 205.0
CMS3_k127_4789422_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K18917 - 1.20.4.3 0.00000001026 57.0
CMS3_k127_479152_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 323.0
CMS3_k127_479152_1 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000000000000000000000000001092 197.0
CMS3_k127_479152_2 Pfam:DUF59 - - - 0.000000000000000000000000002168 114.0
CMS3_k127_479152_3 Peptidase family M23 - - - 0.000000000002032 80.0
CMS3_k127_479152_4 SMART Animal peptidoglycan recognition protein PGRP - - - 0.000000000002685 80.0
CMS3_k127_479152_5 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component K09013 - - 0.000001166 50.0
CMS3_k127_4812038_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000009666 190.0
CMS3_k127_4812038_1 Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000000000000000000002384 186.0
CMS3_k127_4817069_0 COGs COG1108 ABC-type Mn2 Zn2 transport systems permease components K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000253 236.0
CMS3_k127_4817069_1 Zinc-uptake complex component A periplasmic K02077,K09818 - - 0.00000000000000000000000000000000000000000000000000000000000003082 228.0
CMS3_k127_4817069_2 Protein of unknown function (DUF2568) - - - 0.000000000000000000000000000000000000000879 151.0
CMS3_k127_4826978_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1147.0
CMS3_k127_4827403_0 secretion activating protein - - - 0.000000000000000000000000000001611 128.0
CMS3_k127_4835265_0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000005685 135.0
CMS3_k127_4837877_0 StbA protein K18640 - - 0.0001838 52.0
CMS3_k127_4838445_0 PFAM VanW family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 332.0
CMS3_k127_4838445_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001156 263.0
CMS3_k127_4838445_2 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000005894 164.0
CMS3_k127_4850243_0 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 0.00000000000000000000000000046 121.0
CMS3_k127_4850243_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000005788 113.0
CMS3_k127_4850243_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000007544 97.0
CMS3_k127_4850243_3 Forkhead associated domain - - - 0.00000001015 64.0
CMS3_k127_4859526_0 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000001975 153.0
CMS3_k127_4859526_1 aminotransferase class I and II - - - 0.00000000000000000000002162 101.0
CMS3_k127_4863308_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000001665 198.0
CMS3_k127_4864140_0 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 306.0
CMS3_k127_4866823_0 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000000000000000000001832 214.0
CMS3_k127_4866823_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000001331 155.0
CMS3_k127_4866823_2 Protein of unknown function (DUF2652) - - - 0.000000000000002694 85.0
CMS3_k127_487236_0 Membrane - - - 0.000000000000000000000000002673 124.0
CMS3_k127_4873076_0 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 355.0
CMS3_k127_4878974_0 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000004668 178.0
CMS3_k127_4878974_1 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000004312 121.0
CMS3_k127_4882195_0 ATP-binding protein K16786 - - 0.00000000000000000000000000000000002843 141.0
CMS3_k127_4882195_1 ECF-type riboflavin transporter, S component - - - 0.000000000000000000000000001041 119.0
CMS3_k127_4882195_2 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000001491 86.0
CMS3_k127_4882233_0 decarboxylase K01593 - 4.1.1.105,4.1.1.28 2.975e-202 640.0
CMS3_k127_4883412_0 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000004244 210.0
CMS3_k127_4883412_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0004013 49.0
CMS3_k127_488342_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 339.0
CMS3_k127_488342_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000002524 211.0
CMS3_k127_488342_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000004965 168.0
CMS3_k127_488342_3 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000001289 147.0
CMS3_k127_488342_4 translation initiation factor activity - - - 0.0000000000000000000000000006487 132.0
CMS3_k127_488342_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001578 115.0
CMS3_k127_488342_6 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000001981 119.0
CMS3_k127_4884022_0 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 422.0
CMS3_k127_4884022_1 DNA alkylation repair enzyme - - - 0.0000000006438 64.0
CMS3_k127_4884924_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 494.0
CMS3_k127_4884924_1 PFAM Enoyl-CoA hydratase isomerase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000006161 160.0
CMS3_k127_4897162_0 - - - - 0.000001057 60.0
CMS3_k127_4906837_0 DNA invertase Pin - - - 0.00000000004739 76.0
CMS3_k127_4911436_0 COGs COG1131 ABC-type multidrug transport system ATPase component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 335.0
CMS3_k127_4915186_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 462.0
CMS3_k127_4915186_1 Peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 380.0
CMS3_k127_4915186_2 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 351.0
CMS3_k127_4915186_3 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - - - 0.0000000000000000000000000000000000000000000000000000000000001269 217.0
CMS3_k127_4915186_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000003904 212.0
CMS3_k127_4915186_5 FCD domain - - - 0.0000000000000000000000000000000000000000000000000562 185.0
CMS3_k127_4915186_6 cheY-homologous receiver domain - - - 0.000000000000000000000284 102.0
CMS3_k127_4915186_7 Response regulator receiver - - - 0.00000000000004781 77.0
CMS3_k127_491587_0 PFAM binding-protein-dependent transport systems inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 321.0
CMS3_k127_491587_1 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000001933 107.0
CMS3_k127_491587_2 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.0002999 44.0
CMS3_k127_4920431_0 Catalyzes the formation of S-adenosylmethionine from methionine and ATP K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000396 285.0
CMS3_k127_4920431_1 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000008018 111.0
CMS3_k127_4921956_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000001111 123.0
CMS3_k127_4922270_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000003782 252.0
CMS3_k127_4922270_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000002812 124.0
CMS3_k127_4922270_2 Psort location CytoplasmicMembrane, score K07098 - - 0.00008771 51.0
CMS3_k127_4930202_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 625.0
CMS3_k127_4930202_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000006731 205.0
CMS3_k127_493593_0 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 541.0
CMS3_k127_4938438_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 415.0
CMS3_k127_4938866_0 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 293.0
CMS3_k127_4938866_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000002073 237.0
CMS3_k127_4938866_2 NB-ARC domain protein - - - 0.000000000000000000002029 102.0
CMS3_k127_4941872_0 PFAM dehydrogenase E1 component K21416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008992 471.0
CMS3_k127_4941872_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 376.0
CMS3_k127_4941872_2 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
CMS3_k127_4941872_3 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K21417 - - 0.0000000000000000000007467 95.0
CMS3_k127_4942241_0 - - - - 0.0000001494 61.0
CMS3_k127_4944836_0 - - - - 0.00000000001258 76.0
CMS3_k127_4947436_0 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 320.0
CMS3_k127_4947436_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 301.0
CMS3_k127_4947436_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000003947 242.0
CMS3_k127_4947436_3 Transposase domain (DUF772) K07487 - - 0.0000000000000000000000000000000000000004897 154.0
CMS3_k127_4947436_4 YCII-related domain - - - 0.000000000000000003466 89.0
CMS3_k127_4947436_5 Transposase DDE domain - - - 0.00000004946 55.0
CMS3_k127_4948290_0 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 388.0
CMS3_k127_4948290_1 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.00000000000000000003047 91.0
CMS3_k127_4955516_0 - - - - 0.000000000000000000000000000000000000000001688 168.0
CMS3_k127_4958048_0 PFAM peptidase M29, aminopeptidase II K19689 - - 0.000000000000000000000000000000000000000000000000000000000005926 216.0
CMS3_k127_4958048_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000003464 70.0
CMS3_k127_4958602_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001568 282.0
CMS3_k127_4958602_1 lactate metabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002641 271.0
CMS3_k127_4959603_0 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 441.0
CMS3_k127_4959603_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000001705 238.0
CMS3_k127_4959603_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000007405 141.0
CMS3_k127_4960592_0 Hypothetical methyltransferase - - - 0.00000000000000000000000000000000000000000000000463 177.0
CMS3_k127_4960592_1 Conserved Protein - - - 0.00000000008016 66.0
CMS3_k127_4960592_2 - - - - 0.0005414 52.0
CMS3_k127_4961355_0 PHP domain protein K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 608.0
CMS3_k127_4961355_1 Stage II sporulation K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005974 278.0
CMS3_k127_4961355_2 - - - - 0.00000000000000000000000000000000000000000000000000001929 193.0
CMS3_k127_4961355_3 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000006766 160.0
CMS3_k127_4961355_4 enzyme binding K00567,K07443 - 2.1.1.63 0.000000000000000000000003123 108.0
CMS3_k127_4971833_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 433.0
CMS3_k127_49731_0 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005158 255.0
CMS3_k127_4974658_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 452.0
CMS3_k127_4980558_0 Serine threonine protein kinase K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 358.0
CMS3_k127_4980558_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000009907 208.0
CMS3_k127_4980558_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K05873,K12960 - 3.5.4.28,3.5.4.31,4.6.1.1 0.0000000000000000000000000000000000000000000006889 171.0
CMS3_k127_498120_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 489.0
CMS3_k127_498120_1 Dehydrogenase - - - 0.00000000000000000000000000000001105 131.0
CMS3_k127_4988796_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000897 251.0
CMS3_k127_4988796_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000001285 177.0
CMS3_k127_4988796_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000002493 166.0
CMS3_k127_4988796_3 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000001192 161.0
CMS3_k127_4988796_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000006379 136.0
CMS3_k127_4988796_5 CoA binding domain K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000003124 134.0
CMS3_k127_4988796_6 DDE_Tnp_1-associated - - - 0.00000000001409 64.0
CMS3_k127_4992753_0 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000009038 227.0
CMS3_k127_4992753_1 phosphorelay signal transduction system - - - 0.000000000000000000000002368 107.0
CMS3_k127_4992753_2 response regulator K11444 - 2.7.7.65 0.00002173 48.0
CMS3_k127_4993466_0 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008146 274.0
CMS3_k127_4994711_0 aminoglycoside 3-N-acetyltransferase activity K00662 - 2.3.1.81 0.00000000000000000000000000000000000000000000000000000000143 209.0
CMS3_k127_4994711_1 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000243 98.0
CMS3_k127_5001783_0 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001352 247.0
CMS3_k127_5001783_1 TIGRFAM small GTP-binding protein K06945 - - 0.0000000000000000000000000000000000000000000006607 171.0
CMS3_k127_5011229_0 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000004169 191.0
CMS3_k127_5011229_1 cell redox homeostasis - - - 0.000000002929 60.0
CMS3_k127_5013287_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 398.0
CMS3_k127_5013287_1 - - - - 0.00000000000000000000000000000000000002086 150.0
CMS3_k127_5017564_0 domain, Protein K09766 - - 0.000000000000000000000007797 117.0
CMS3_k127_5017564_1 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000004161 74.0
CMS3_k127_5023283_0 PFAM PfkB domain protein K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 327.0
CMS3_k127_5023283_1 Glycosyltransferase like family 2 - - - 0.000000008957 65.0
CMS3_k127_5032088_0 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000007031 235.0
CMS3_k127_5034439_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000001197 109.0
CMS3_k127_5034439_1 PFAM pentapeptide repeat protein - - - 0.0000000000000009507 88.0
CMS3_k127_5038640_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 412.0
CMS3_k127_504159_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0016787,GO:0016822,GO:0016823,GO:0030429 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 334.0
CMS3_k127_504159_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0016787,GO:0016822,GO:0016823,GO:0030429 3.7.1.3 0.0000000000000000000000000000000000000000000007428 169.0
CMS3_k127_5055463_0 Semialdehyde dehydrogenase, NAD binding domain K00133,K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016620,GO:0016903,GO:0030312,GO:0036094,GO:0040007,GO:0043891,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071944,GO:0097159,GO:1901265,GO:1901363 1.2.1.11,1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 406.0
CMS3_k127_5055463_1 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.00000000000000000000000000000000000000001105 156.0
CMS3_k127_5061168_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000005109 106.0
CMS3_k127_5065432_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000003223 179.0
CMS3_k127_5067239_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000003974 204.0
CMS3_k127_5068095_0 CHAT domain - - - 0.0000000000000000000000000000000000009816 153.0
CMS3_k127_5068386_0 Belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 317.0
CMS3_k127_5068386_1 Type IV secretion-system coupling protein DNA-binding domain - - - 0.0000000000000001417 84.0
CMS3_k127_507178_0 Pfam:DUF2305 - - - 0.000000000000000000000000000000000000000000000000000001122 213.0
CMS3_k127_507178_1 Histidine kinase - - - 0.00000002497 67.0
CMS3_k127_5072358_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 361.0
CMS3_k127_5072358_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000003957 242.0
CMS3_k127_5074694_0 sh3 domain protein - - - 0.00000000000000006106 94.0
CMS3_k127_5081412_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005981 254.0
CMS3_k127_5081412_1 spore germination - - - 0.0000000000000000000000000000000000000000000000000000004121 206.0
CMS3_k127_5083955_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000349 136.0
CMS3_k127_5083955_1 Tetratricopeptide repeat - - - 0.0000000000000000000000009986 113.0
CMS3_k127_5084095_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.075e-209 664.0
CMS3_k127_5084095_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000003794 118.0
CMS3_k127_5086518_0 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000008414 80.0
CMS3_k127_5086518_1 Periplasmic copper-binding protein (NosD) - - - 0.0000000006724 71.0
CMS3_k127_5086518_2 lactoylglutathione lyase activity - - - 0.000000003494 63.0
CMS3_k127_5112872_0 VWA domain containing CoxE-like protein K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000828 254.0
CMS3_k127_5115427_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 390.0
CMS3_k127_5115427_1 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 296.0
CMS3_k127_5116630_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000003313 214.0
CMS3_k127_5116630_1 PFAM sigma-70 region 2 domain protein - - - 0.00000000000000000000000000000000000000000000002391 176.0
CMS3_k127_5116630_2 PFAM Formylglycine-generating sulfatase enzyme K20276 - - 0.00000000000000000000000000000000000000002521 170.0
CMS3_k127_5116630_3 Domain of unknown function (DUF305) - - - 0.0000000000000000000002893 113.0
CMS3_k127_5116630_4 Polymer-forming cytoskeletal - - - 0.00000000000000000000525 105.0
CMS3_k127_5116630_5 Transcriptional regulator - - - 0.000000000005467 70.0
CMS3_k127_5116630_6 amine dehydrogenase activity - - - 0.00001749 58.0
CMS3_k127_5116630_7 Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation - GO:0005575,GO:0016020 - 0.0001757 51.0
CMS3_k127_5123372_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 422.0
CMS3_k127_5123372_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 297.0
CMS3_k127_5123372_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000001596 231.0
CMS3_k127_5123372_3 His Kinase A (phosphoacceptor) domain K02529 - - 0.000000000000000003495 89.0
CMS3_k127_512403_0 - - - - 0.000000000000000000000000000000000006685 143.0
CMS3_k127_512403_1 phosphorelay signal transduction system - - - 0.0000000000000000000000004098 109.0
CMS3_k127_512403_2 Domain of unknown function (DUF4349) - - - 0.00000000000000000000001599 108.0
CMS3_k127_5127839_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000009459 198.0
CMS3_k127_5128959_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 606.0
CMS3_k127_5128959_1 Radical_SAM C-terminal domain K07739 - 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000000002022 230.0
CMS3_k127_5128959_2 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000001595 174.0
CMS3_k127_5129787_0 Transcriptional regulator - - - 0.0000001153 65.0
CMS3_k127_513513_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 344.0
CMS3_k127_513513_1 cell envelope-related transcriptional attenuator - - - 0.0000000000000000000000000000000000000000000002414 185.0
CMS3_k127_513513_2 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000003146 171.0
CMS3_k127_5145116_0 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 483.0
CMS3_k127_5145116_1 TIGRFAM small GTP-binding protein K06945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 288.0
CMS3_k127_5145116_2 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001973 280.0
CMS3_k127_5145116_3 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000001674 233.0
CMS3_k127_5145116_4 Shikimate quinate 5-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000001286 195.0
CMS3_k127_5148419_0 ABC transporter substrate-binding protein K15580 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000001277 151.0
CMS3_k127_5148419_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.00003487 52.0
CMS3_k127_5155839_1 - - - - 0.0008 48.0
CMS3_k127_5163922_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 323.0
CMS3_k127_5163922_1 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000005557 152.0
CMS3_k127_5163922_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000006733 75.0
CMS3_k127_5163922_3 LysM domain - - - 0.000000009629 63.0
CMS3_k127_5163922_4 Protein conserved in bacteria - - - 0.0000275 56.0
CMS3_k127_5165499_0 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002328 276.0
CMS3_k127_5165499_1 anaphase-promoting complex binding K21440 - - 0.0000000006754 64.0
CMS3_k127_5165499_2 - - - - 0.000001211 56.0
CMS3_k127_5166132_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006286 286.0
CMS3_k127_5166132_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000001047 117.0
CMS3_k127_5166132_2 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000001377 83.0
CMS3_k127_5166443_0 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000002198 208.0
CMS3_k127_5166443_1 Tetratricopeptide repeat - - - 0.00003601 55.0
CMS3_k127_5169568_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 470.0
CMS3_k127_518549_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 385.0
CMS3_k127_518549_1 secondary active sulfate transmembrane transporter activity K03321 - - 0.00000000000000000000000000000007954 130.0
CMS3_k127_5189356_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002508 270.0
CMS3_k127_5189356_1 - - - - 0.0000002429 62.0
CMS3_k127_5194658_0 CoA-ligase K02381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 508.0
CMS3_k127_5195068_0 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000004635 214.0
CMS3_k127_5195068_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000004858 183.0
CMS3_k127_5197817_0 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 583.0
CMS3_k127_5197817_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 323.0
CMS3_k127_5197817_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001074 248.0
CMS3_k127_5202585_0 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 317.0
CMS3_k127_5202585_1 dehydratase - - - 0.000000000000000000000000000000000000000001324 160.0
CMS3_k127_5202585_2 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000286 116.0
CMS3_k127_5205301_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000003244 141.0
CMS3_k127_5205301_1 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.000000000000001196 89.0
CMS3_k127_5212736_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 GO:0008150,GO:0040007 6.3.2.10 0.00000000000000000000000000000000000000000000000008536 190.0
CMS3_k127_5212736_1 poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 - - 0.0001173 53.0
CMS3_k127_5214881_0 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000001391 226.0
CMS3_k127_5214881_1 - - - - 0.000000000000000000003411 102.0
CMS3_k127_5214881_2 - - - - 0.00000000000000000001614 94.0
CMS3_k127_5215443_0 Thi4 family K00313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 396.0
CMS3_k127_5215443_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 295.0
CMS3_k127_5217738_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000009464 147.0
CMS3_k127_5217738_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0004568 49.0
CMS3_k127_521857_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 372.0
CMS3_k127_521857_1 - - - - 0.000000000000234 77.0
CMS3_k127_521857_4 tocopherol cyclase activity K09834 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006720,GO:0006721,GO:0006725,GO:0006766,GO:0006775,GO:0006778,GO:0006807,GO:0006810,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0008643,GO:0009058,GO:0009110,GO:0009266,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009528,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009642,GO:0009644,GO:0009651,GO:0009706,GO:0009915,GO:0009941,GO:0009975,GO:0009976,GO:0009987,GO:0010189,GO:0010232,GO:0010233,GO:0010287,GO:0015766,GO:0015770,GO:0015772,GO:0015994,GO:0016020,GO:0016108,GO:0016116,GO:0016122,GO:0018130,GO:0019752,GO:0019866,GO:0031090,GO:0031347,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032787,GO:0033013,GO:0042170,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048583,GO:0050789,GO:0050896,GO:0051179,GO:0051186,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:0080134,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617 5.5.1.24 0.000005085 57.0
CMS3_k127_521857_5 YtxH-like protein - - - 0.0003671 48.0
CMS3_k127_5221312_0 oxidoreductase activity K02396 - - 0.0000000004664 71.0
CMS3_k127_5223501_0 PFAM Ig domain protein group 2 domain protein - - - 0.000000001693 70.0
CMS3_k127_5227700_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 329.0
CMS3_k127_5227700_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000000000008311 164.0
CMS3_k127_5230725_0 histidine kinase HAMP region domain protein K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 301.0
CMS3_k127_5230725_1 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007943 255.0
CMS3_k127_5230725_2 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000003791 148.0
CMS3_k127_5230725_3 peptidase - - - 0.00000000000000000000000000000000001867 146.0
CMS3_k127_5231508_0 tpr repeat - - - 0.00000000000000006762 93.0
CMS3_k127_5231508_1 Thymidylate synthase K00560 - 2.1.1.45 0.000000000000005032 83.0
CMS3_k127_5234410_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000003218 206.0
CMS3_k127_5234410_1 Methyltransferase K15256 - - 0.000000000000000000000000000000000000001112 153.0
CMS3_k127_5237022_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.595e-220 695.0
CMS3_k127_5237022_1 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000007895 247.0
CMS3_k127_5237022_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000002329 238.0
CMS3_k127_5237022_3 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.000000000000000000000000000000000000000000000000000000000000000000259 241.0
CMS3_k127_5237233_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 437.0
CMS3_k127_5237859_0 formate dehydrogenase (NAD+) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 297.0
CMS3_k127_5237859_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000007158 226.0
CMS3_k127_5238318_0 WD40 repeats - - - 0.000000566 54.0
CMS3_k127_5242616_0 Bacterial Na+/H+ antiporter B (NhaB) - - - 0.00000000000000000000000000000000000000000000000001724 188.0
CMS3_k127_5242616_1 Spermine/spermidine synthase domain - - - 0.000000000000000002415 86.0
CMS3_k127_5242616_2 universal stress protein family - - - 0.0001412 49.0
CMS3_k127_5252328_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000004323 164.0
CMS3_k127_525753_0 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007733 254.0
CMS3_k127_525753_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000002925 91.0
CMS3_k127_5260920_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 524.0
CMS3_k127_5260920_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 432.0
CMS3_k127_5260920_2 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 347.0
CMS3_k127_5260920_3 PFAM YbbR family protein - - - 0.00000000000000000000000000000000000000004845 160.0
CMS3_k127_5264098_0 PFAM AAA ATPase central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 499.0
CMS3_k127_5264098_1 carboxylic acid catabolic process - - - 0.00000000000000000000000000007805 124.0
CMS3_k127_5267398_0 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 390.0
CMS3_k127_5267398_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 363.0
CMS3_k127_5269643_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 349.0
CMS3_k127_5269643_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000001055 116.0
CMS3_k127_5270472_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000002154 256.0
CMS3_k127_5278591_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000001771 180.0
CMS3_k127_5278591_1 Methyltransferase - - - 0.00000000000003936 75.0
CMS3_k127_5280079_0 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000001337 236.0
CMS3_k127_5280079_1 Nacht domain K06147 - - 0.000000000000000000000000000005237 126.0
CMS3_k127_5281192_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 361.0
CMS3_k127_5281192_1 diguanylate cyclase - - - 0.000000001157 73.0
CMS3_k127_5281192_2 diguanylate cyclase - - - 0.000000004569 71.0
CMS3_k127_528499_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 394.0
CMS3_k127_528499_1 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine K18912 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0019439,GO:0019752,GO:0034641,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0055114,GO:0071704,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.14.99.50 0.000000000000000000000000000000000000000000000003781 185.0
CMS3_k127_528499_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K00657 - 2.3.1.57 0.000000000000000000000000000000854 125.0
CMS3_k127_5287502_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 553.0
CMS3_k127_5287502_1 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 369.0
CMS3_k127_5287502_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006223 278.0
CMS3_k127_5287502_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000005323 51.0
CMS3_k127_5287502_4 Creatinase/Prolidase N-terminal domain K01271,K01274 - 3.4.13.9 0.00005419 51.0
CMS3_k127_5296398_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 379.0
CMS3_k127_530027_0 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000006701 93.0
CMS3_k127_5300542_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000001027 167.0
CMS3_k127_5309957_0 ABC transporter substrate-binding protein K15580 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000000003171 103.0
CMS3_k127_5309957_1 Acetyltransferase (GNAT) domain - - - 0.000000005542 65.0
CMS3_k127_5317323_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000003446 204.0
CMS3_k127_5323601_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000002626 216.0
CMS3_k127_5332407_0 spore germination K03298 - - 0.00000000000000000000000000000000000000000000000000003034 199.0
CMS3_k127_5332535_0 Phage portal protein, SPP1 Gp6-like - - - 0.0000000000000000000000002495 118.0
CMS3_k127_5339503_0 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 308.0
CMS3_k127_5339503_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000006049 122.0
CMS3_k127_5339503_2 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000001002 117.0
CMS3_k127_5339619_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 474.0
CMS3_k127_5339619_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 304.0
CMS3_k127_5339619_2 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003113 288.0
CMS3_k127_5339619_3 PFAM peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000002344 207.0
CMS3_k127_5339619_4 - - - - 0.00000000000000000000003277 109.0
CMS3_k127_5339619_5 Protein of unknown function (DUF2905) - - - 0.000000000000001986 78.0
CMS3_k127_5339619_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000001423 75.0
CMS3_k127_5346896_0 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000001793 190.0
CMS3_k127_5346896_1 - - - - 0.000000000000000003103 85.0
CMS3_k127_5349259_0 peptidase activity K01286 - 3.4.16.4 0.00000000001877 76.0
CMS3_k127_5356488_0 Thiopurine S-methyltransferase (TPMT) - - - 0.0000000000000000000000000000000000000000000000000000000000002441 219.0
CMS3_k127_5356488_1 PFAM Transglycosylase-associated protein - - - 0.00000000000000000005605 93.0
CMS3_k127_5368576_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 456.0
CMS3_k127_5368576_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000001109 212.0
CMS3_k127_5368576_2 exodeoxyribonuclease I activity - - - 0.000002557 51.0
CMS3_k127_5376059_0 SMART PUA domain containing protein K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 435.0
CMS3_k127_5376059_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000002832 143.0
CMS3_k127_5382666_0 histidine kinase HAMP region domain protein K07642 - 2.7.13.3 0.00000000000000000000000000000000000006721 159.0
CMS3_k127_5382666_1 - - - - 0.0000000000000000000000000002 124.0
CMS3_k127_5386001_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 389.0
CMS3_k127_5386001_1 Glycosyltransferase, group 2 family protein K09809,K19427 - 2.7.8.12 0.00003191 53.0
CMS3_k127_5389399_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 332.0
CMS3_k127_5389399_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 295.0
CMS3_k127_5391292_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001123 284.0
CMS3_k127_5391292_1 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000007739 204.0
CMS3_k127_5391875_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 459.0
CMS3_k127_5391875_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 308.0
CMS3_k127_5391875_2 Nitroreductase family - - - 0.00000000000000000000000000000000000006826 147.0
CMS3_k127_5395836_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.396e-256 806.0
CMS3_k127_5396069_0 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 340.0
CMS3_k127_5396069_1 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000004102 216.0
CMS3_k127_5396529_0 Methyltransferase domain - - - 0.00000000000000000000000000000002697 136.0
CMS3_k127_5406568_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001693 190.0
CMS3_k127_5406568_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000008776 132.0
CMS3_k127_5407432_0 Ferrous iron transport protein B C terminus K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001233 242.0
CMS3_k127_5407432_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000002307 152.0
CMS3_k127_5407432_2 Domain of unknown function (DUF427) - - - 0.0000000000000000000000002851 108.0
CMS3_k127_5413081_0 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000005053 229.0
CMS3_k127_5413081_1 NAD(P)-binding Rossmann-like domain - - - 0.0000000007082 61.0
CMS3_k127_5414294_0 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000001021 265.0
CMS3_k127_5414294_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000001101 208.0
CMS3_k127_5416105_0 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000004391 164.0
CMS3_k127_5424187_0 Transposase IS4 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 337.0
CMS3_k127_5424187_1 Transglycosylase associated protein - - - 0.0000000000000000002914 90.0
CMS3_k127_5424187_2 integral membrane protein - - - 0.00000000000003071 78.0
CMS3_k127_5424187_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000003526 53.0
CMS3_k127_5446586_0 PFAM phenylacetic acid catabolic family protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 430.0
CMS3_k127_5446586_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000001079 63.0
CMS3_k127_545031_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 613.0
CMS3_k127_545031_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000663 173.0
CMS3_k127_545031_2 antibiotic catabolic process - - - 0.000000001451 66.0
CMS3_k127_545031_3 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000001044 60.0
CMS3_k127_5450429_0 - - - - 0.00000000000000000000000000000000000000000000000002162 190.0
CMS3_k127_5450429_1 Threonine dehydratase K01754 - 4.3.1.19 0.000000000005794 68.0
CMS3_k127_5450429_2 Orotidine 5'-phosphate decarboxylase K13831 - 4.1.2.43,5.3.1.27 0.000001619 54.0
CMS3_k127_545082_0 PFAM Forkhead-associated protein - - - 0.0000000000000000000000000000000000003683 150.0
CMS3_k127_545082_1 PFAM Forkhead-associated protein - - - 0.000000000004991 72.0
CMS3_k127_5451556_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000766 263.0
CMS3_k127_5451556_1 AhpC/TSA family - - - 0.00000000000000000000001755 104.0
CMS3_k127_5451556_2 catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the K01962,K01963 - 2.1.3.15,6.4.1.2 0.000001468 55.0
CMS3_k127_5457212_0 Ecdysteroid kinase - - - 0.0000000000000000000000000000000000000000000000003437 190.0
CMS3_k127_5457212_1 Domain of unknown function (DUF4349) - - - 0.0000000000000000000000000000000001291 145.0
CMS3_k127_5457212_2 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000005097 132.0
CMS3_k127_545886_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000004058 224.0
CMS3_k127_545886_1 PFAM CobQ CobB MinD ParA nucleotide binding domain - - - 0.0000000000000000000000000000000000001096 145.0
CMS3_k127_545886_2 - - - - 0.0000000000001029 73.0
CMS3_k127_5468920_0 Aminoacyl-tRNA editing domain - - - 0.000000000000000000000000001058 119.0
CMS3_k127_5468920_1 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000001344 85.0
CMS3_k127_5468920_2 EthD domain - - - 0.0005155 46.0
CMS3_k127_5469774_0 peptidase C60 sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000000000125 148.0
CMS3_k127_5469774_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000007207 129.0
CMS3_k127_5469774_2 SnoaL-like domain - - - 0.000000000000001653 77.0
CMS3_k127_5469774_3 Thioredoxin-like - - - 0.00007828 46.0
CMS3_k127_5470401_0 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 300.0
CMS3_k127_5470401_1 serine-type endopeptidase activity - - - 0.000000000000000000000000000000553 133.0
CMS3_k127_5470421_0 AAA domain K06919 - - 0.0000000000000000000000000001249 125.0
CMS3_k127_5470421_1 PFAM P4 alpha zinc-binding domain protein - - - 0.00000000000000000758 87.0
CMS3_k127_5472807_0 4-hydroxyphenylpyruvate dioxygenase K00457 GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0043436,GO:0044003,GO:0044004,GO:0044179,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046395,GO:0051213,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 317.0
CMS3_k127_5472807_1 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000007092 172.0
CMS3_k127_5473099_0 Helicase conserved C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002708 271.0
CMS3_k127_5473099_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000249 104.0
CMS3_k127_5485192_0 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 425.0
CMS3_k127_5485192_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000002292 145.0
CMS3_k127_5485192_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000007204 77.0
CMS3_k127_5485870_0 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000008897 254.0
CMS3_k127_5485870_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002291 244.0
CMS3_k127_5486857_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008583 291.0
CMS3_k127_5497614_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000007043 104.0
CMS3_k127_5507483_0 phosphorelay signal transduction system - - - 0.0000000000000000003536 100.0
CMS3_k127_5507483_1 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.0000000000000008957 83.0
CMS3_k127_5514706_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 258.0
CMS3_k127_5514706_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K02548,K03179,K17105 - 2.5.1.39,2.5.1.42,2.5.1.74 0.000000000000000000000000000000000000000000000000000002345 203.0
CMS3_k127_5514706_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000001976 150.0
CMS3_k127_5514706_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000002683 65.0
CMS3_k127_5524465_0 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 397.0
CMS3_k127_5524465_1 PFAM ABC transporter related K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 335.0
CMS3_k127_5524465_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 340.0
CMS3_k127_5524465_3 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 313.0
CMS3_k127_5524465_4 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
CMS3_k127_5524465_5 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000003513 138.0
CMS3_k127_5524465_6 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.0000000000000000000000000000000005669 138.0
CMS3_k127_5524465_7 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000003864 79.0
CMS3_k127_552969_0 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 312.0
CMS3_k127_552969_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000002728 108.0
CMS3_k127_5530302_0 Na H antiporter K03316 - - 0.0000000000000000000000000000000000000000000000000002159 198.0
CMS3_k127_5530302_1 pfam nudix K01515 - 3.6.1.13 0.0000000000000000000000000002905 120.0
CMS3_k127_5530302_2 amine dehydrogenase activity - - - 0.000000000004898 78.0
CMS3_k127_5537958_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000003329 179.0
CMS3_k127_5537958_1 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000122 164.0
CMS3_k127_5543731_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000004935 194.0
CMS3_k127_5543731_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K03320 - - 0.00000000000000000000000000000003075 128.0
CMS3_k127_5543731_2 response to heat K03668,K09914 - - 0.00000000000000001558 94.0
CMS3_k127_5550760_0 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 359.0
CMS3_k127_5550760_1 Methionine biosynthesis protein MetW - - - 0.0000000000000000000005522 101.0
CMS3_k127_5559831_0 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000005562 176.0
CMS3_k127_5559831_1 AraC-like ligand binding domain - - - 0.0000872 50.0
CMS3_k127_5560135_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 323.0
CMS3_k127_5560135_1 phosphate transport system permease protein K02038 - - 0.00000000000000000000000004316 117.0
CMS3_k127_556159_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 441.0
CMS3_k127_556159_1 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000007155 119.0
CMS3_k127_5563650_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.848e-209 661.0
CMS3_k127_556667_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 6.571e-208 661.0
CMS3_k127_5575345_0 8-amino-7-oxononanoate synthase activity K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 541.0
CMS3_k127_5575345_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 366.0
CMS3_k127_5575345_2 NAD synthase K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000004374 182.0
CMS3_k127_5575345_3 lipoprotein biosynthetic process K13292 - - 0.000000000000001717 86.0
CMS3_k127_5575632_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 562.0
CMS3_k127_5575632_1 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000000000000000001274 175.0
CMS3_k127_5575632_2 Uncharacterised protein, DegV family COG1307 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000006478 142.0
CMS3_k127_5579753_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000471 224.0
CMS3_k127_5579753_1 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000002425 157.0
CMS3_k127_5579753_2 Chromate resistance exported protein - - - 0.00000000000001348 74.0
CMS3_k127_5585101_0 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000001253 262.0
CMS3_k127_5585101_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000004036 214.0
CMS3_k127_5588490_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 325.0
CMS3_k127_5588490_1 PFAM formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000005835 256.0
CMS3_k127_5588490_2 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000005392 188.0
CMS3_k127_5591246_0 PFAM peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 307.0
CMS3_k127_5591246_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000001915 168.0
CMS3_k127_559675_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 344.0
CMS3_k127_5598343_0 DUF218 domain - - - 0.00000000000000000003869 98.0
CMS3_k127_5598343_1 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000002062 89.0
CMS3_k127_5602305_0 PFAM Forkhead-associated protein - - - 0.000006919 55.0
CMS3_k127_5627340_0 Protein of unknown function (DUF3048) C-terminal domain - - - 0.0000000000000000000000000000000141 137.0
CMS3_k127_5627754_0 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000003035 134.0
CMS3_k127_5627754_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000006275 128.0
CMS3_k127_5627754_2 Calcineurin-like phosphoesterase superfamily domain K01090 - 3.1.3.16 0.0000000000000000001787 92.0
CMS3_k127_5627754_3 STAS domain K04749 - - 0.000000001461 67.0
CMS3_k127_5627754_4 PFAM Methyltransferase domain K00598 - 2.1.1.144 0.000000002057 69.0
CMS3_k127_5634648_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000002474 254.0
CMS3_k127_5634648_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000004773 248.0
CMS3_k127_5634648_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000001745 114.0
CMS3_k127_563626_0 Binding-protein-dependent transport system inner membrane component K02050,K15554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007458 345.0
CMS3_k127_564260_0 PFAM PUCC protein K08226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 404.0
CMS3_k127_564260_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000001399 181.0
CMS3_k127_564260_2 Membrane protein involved in the export of O-antigen and teichoic acid K03328,K16695 - - 0.0000001398 63.0
CMS3_k127_5648118_0 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 395.0
CMS3_k127_5648118_1 Protein of unknown function (DUF2785) - - - 0.0000000000000000000000000000000000000000000000000001094 196.0
CMS3_k127_5648380_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000002668 204.0
CMS3_k127_5648380_1 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000001976 150.0
CMS3_k127_5651747_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000005 232.0
CMS3_k127_5651747_1 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000002091 223.0
CMS3_k127_5651747_2 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000258 183.0
CMS3_k127_5656333_0 TIGRFAM cysteine desulfurase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 366.0
CMS3_k127_5656351_0 Transposase - - - 0.00000000000000000000000004422 120.0
CMS3_k127_5657986_0 MFS_1 like family - - - 0.00000000000000000000000000000000000000000001008 173.0
CMS3_k127_5657986_1 - - - - 0.000000000000000000000000000001838 128.0
CMS3_k127_5688888_0 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 239.0
CMS3_k127_5688888_1 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000001519 223.0
CMS3_k127_5688888_2 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000004155 223.0
CMS3_k127_5688888_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000004668 178.0
CMS3_k127_5688888_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000002258 150.0
CMS3_k127_5702579_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000002247 256.0
CMS3_k127_5702579_1 Domain of unknown function (DUF348) - - - 0.0000000000000000000000000000000000000000000000000000000000000241 225.0
CMS3_k127_5702579_2 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000002102 160.0
CMS3_k127_5702579_3 WD domain, G-beta repeat - - - 0.000000000000000002406 98.0
CMS3_k127_5702579_4 histidine kinase HAMP region domain protein - - - 0.000000000009991 77.0
CMS3_k127_5706753_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000001535 193.0
CMS3_k127_5706753_1 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.000000000000000000000000000000002822 135.0
CMS3_k127_5706753_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000005306 96.0
CMS3_k127_5709078_0 acetyltransferase - - - 0.0000000000000000000003163 100.0
CMS3_k127_5709078_1 Transglycosylase SLT domain - - - 0.00000000002029 73.0
CMS3_k127_5720859_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 3.743e-263 817.0
CMS3_k127_5720859_1 Protein of unknown function (DUF521) - - - 0.0000000000000000000000000000000007615 134.0
CMS3_k127_5720859_2 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000006598 106.0
CMS3_k127_5731700_0 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000001894 166.0
CMS3_k127_5731700_1 Peptidase domain protein - - - 0.00007521 51.0
CMS3_k127_5731893_0 pathogenesis K21471,K21687 - - 0.000000000000000000000000000000000000006683 154.0
CMS3_k127_5731893_1 -O-antigen K05350,K21000 - 3.2.1.21 0.0000000000000000001673 95.0
CMS3_k127_5732816_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 456.0
CMS3_k127_5732816_1 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.00000000000000000000000000001374 122.0
CMS3_k127_5732816_2 - - - - 0.00000000000000000007335 93.0
CMS3_k127_5732816_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000104 94.0
CMS3_k127_5737709_0 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000009965 237.0
CMS3_k127_5737709_1 proteolysis K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000006585 177.0
CMS3_k127_5737709_2 Putative regulatory protein - - - 0.00000000000000000000000001147 113.0
CMS3_k127_5737709_3 transposase activity - - - 0.00000002638 60.0
CMS3_k127_5738373_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001181 267.0
CMS3_k127_5738373_1 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000205 208.0
CMS3_k127_5745354_0 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 284.0
CMS3_k127_5745354_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002605 213.0
CMS3_k127_5745354_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000002871 172.0
CMS3_k127_574861_0 response regulator - - - 0.00000000000000000000000000000000000000000000102 173.0
CMS3_k127_574861_1 cheY-homologous receiver domain - - - 0.00000000000000000001939 96.0
CMS3_k127_574861_2 cheY-homologous receiver domain K11443 - - 0.00000000000003236 77.0
CMS3_k127_5750588_0 Sigma-54 interaction domain K03696 - - 0.000000000000000000838 95.0
CMS3_k127_5750588_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0003585 53.0
CMS3_k127_5754038_0 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000001708 204.0
CMS3_k127_5755737_0 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009913 528.0
CMS3_k127_5755737_1 XdhC Rossmann domain K07402 - - 0.000000000000000002139 87.0
CMS3_k127_5757718_0 - - - - 0.000000000000000000000000000000000000000000000000000000004015 212.0
CMS3_k127_5760592_0 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 533.0
CMS3_k127_5760592_1 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000005883 252.0
CMS3_k127_5760592_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001549 259.0
CMS3_k127_5760592_3 oxidoreductase activity - - - 0.00000000000000000000000000001985 127.0
CMS3_k127_5760592_4 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000003688 117.0
CMS3_k127_5760592_5 COG1651 Protein-disulfide isomerase - - - 0.00000000000000000000004574 108.0
CMS3_k127_5784781_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 532.0
CMS3_k127_578928_0 PFAM ROK family protein K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001117 264.0
CMS3_k127_578928_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000002297 190.0
CMS3_k127_578928_3 Transcriptional regulator, TetR family - - - 0.00007403 48.0
CMS3_k127_5789983_0 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000002049 225.0
CMS3_k127_5789983_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000001121 149.0
CMS3_k127_5789983_2 WD40 domain protein beta Propeller K03641 - - 0.00000000006865 72.0
CMS3_k127_5794915_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 347.0
CMS3_k127_5794915_1 - - - - 0.000000000001675 71.0
CMS3_k127_5802231_0 PFAM FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000003222 168.0
CMS3_k127_5802231_1 F420H(2)-dependent quinone reductase - GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0030312,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070967,GO:0071944,GO:0097159,GO:0097367,GO:1901363 - 0.00000006147 61.0
CMS3_k127_5806417_0 - - - - 0.00001184 56.0
CMS3_k127_5816320_0 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000002387 93.0
CMS3_k127_5817636_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 456.0
CMS3_k127_5817636_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 364.0
CMS3_k127_5817636_2 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 345.0
CMS3_k127_5817636_4 PFAM Peptidase family M23 - - - 0.000000005667 58.0
CMS3_k127_5821260_0 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000719 129.0
CMS3_k127_5821260_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000001694 126.0
CMS3_k127_5826854_0 peptidase M29 K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 419.0
CMS3_k127_5826854_1 S-(hydroxymethyl)glutathione dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007983 259.0
CMS3_k127_5826854_2 COG0665 Glycine D-amino acid oxidases (deaminating) K00303 - 1.5.3.1 0.000000000000000000000000000000009822 135.0
CMS3_k127_5832734_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000009708 176.0
CMS3_k127_5832734_1 SMART PAS domain containing protein - - - 0.000000000000000001031 90.0
CMS3_k127_5832734_2 Histidine kinase - - - 0.00005735 51.0
CMS3_k127_5844321_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 556.0
CMS3_k127_5844321_1 PaaX-like protein K02616 - - 0.0000000000000000000000000000000000000000000000000000000000000003042 229.0
CMS3_k127_5844321_2 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.000000000000000000000000000000000000000002795 157.0
CMS3_k127_5845618_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 446.0
CMS3_k127_5845618_1 Acyltransferase family - - - 0.00000000000000003255 89.0
CMS3_k127_5846165_0 transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 501.0
CMS3_k127_5846165_1 - - - - 0.00000000001207 69.0
CMS3_k127_5846881_0 DNA packaging K06909 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 348.0
CMS3_k127_5846881_1 Phage portal protein, SPP1 Gp6-like - - - 0.000000000000000000001336 109.0
CMS3_k127_5846881_2 - - - - 0.00000000000001725 78.0
CMS3_k127_5850426_0 PFAM AIR synthase related protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001611 281.0
CMS3_k127_5850426_1 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000007643 167.0
CMS3_k127_5855672_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000161 145.0
CMS3_k127_5855672_1 Multicopper - - - 0.00000004088 55.0
CMS3_k127_5856248_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 497.0
CMS3_k127_5856248_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 314.0
CMS3_k127_5862513_0 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000008519 126.0
CMS3_k127_5862513_1 Protein of unknown function (DUF3307) - - - 0.00000002214 60.0
CMS3_k127_5866592_0 ABC transporter K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 410.0
CMS3_k127_5866592_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.0000000000000000000000000000000001968 144.0
CMS3_k127_5874704_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 538.0
CMS3_k127_5874704_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005204 275.0
CMS3_k127_5874704_2 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000001409 184.0
CMS3_k127_5878876_0 Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues K01791,K08068 GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008761,GO:0009058,GO:0009059,GO:0009246,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046378,GO:0071704,GO:1901135,GO:1901137,GO:1901576 3.2.1.183,5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 417.0
CMS3_k127_5878876_1 oxidoreductase activity K16216 GO:0003674,GO:0003824,GO:0004757,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0017144,GO:0018130,GO:0019438,GO:0019751,GO:0031224,GO:0034311,GO:0034312,GO:0034641,GO:0042558,GO:0042559,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0050664,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.320 0.000000000000000000000000000000000000000000000000000000000795 209.0
CMS3_k127_5885234_0 Binding-protein-dependent transport system inner membrane component K02063 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 576.0
CMS3_k127_5895105_0 Diguanylate cyclase - - - 0.0000004967 61.0
CMS3_k127_5902875_0 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000006094 219.0
CMS3_k127_5902875_1 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000127 77.0
CMS3_k127_590815_0 B12 binding domain - - - 8.014e-220 687.0
CMS3_k127_5918167_0 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000001137 239.0
CMS3_k127_5918167_1 PFAM cell divisionFtsK SpoIIIE K03466 GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000003011 114.0
CMS3_k127_5918167_2 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 0.000000001674 62.0
CMS3_k127_5919378_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 364.0
CMS3_k127_5919378_1 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007638 276.0
CMS3_k127_5919378_2 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01739,K01758 - 2.5.1.48,4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000003108 235.0
CMS3_k127_5921970_0 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000009186 198.0
CMS3_k127_5926774_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000007374 236.0
CMS3_k127_5941029_0 - - - - 0.0000000000000000000000000002381 119.0
CMS3_k127_5948517_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000007762 168.0
CMS3_k127_5954934_0 PFAM transglutaminase domain protein - - - 0.00000000000000000000004526 111.0
CMS3_k127_5960557_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 9.032e-207 652.0
CMS3_k127_5960557_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000003263 229.0
CMS3_k127_5960557_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000008022 203.0
CMS3_k127_5960557_3 Lipoxygenase homology domains 1 - GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007600,GO:0007605,GO:0008150,GO:0008324,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0032420,GO:0032421,GO:0032501,GO:0034220,GO:0042995,GO:0043005,GO:0043226,GO:0044422,GO:0044464,GO:0046873,GO:0050877,GO:0050896,GO:0050954,GO:0050982,GO:0051179,GO:0051234,GO:0051606,GO:0055085,GO:0070588,GO:0070838,GO:0072511,GO:0097458,GO:0098655,GO:0098660,GO:0098662,GO:0098858,GO:0098862,GO:0120025 - 0.0000000001515 66.0
CMS3_k127_5960690_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 304.0
CMS3_k127_5960690_1 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.000000000000000000000000000000000000000000000000000000000001626 226.0
CMS3_k127_5960690_2 KR domain K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000008837 209.0
CMS3_k127_5960690_3 - - - - 0.0001499 45.0
CMS3_k127_596433_0 Immune inhibitor A peptidase M6 - - - 0.00000000001329 75.0
CMS3_k127_5972413_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 5.145e-229 726.0
CMS3_k127_5981473_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.029e-208 660.0
CMS3_k127_5981473_1 Response regulator receiver domain K07658 - - 0.00000000000000000000000006715 111.0
CMS3_k127_5986718_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 404.0
CMS3_k127_5986718_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000003051 220.0
CMS3_k127_5986718_2 iron-sulfur cluster assembly K07400,K13628 - - 0.0000000000000000000000000000000000000000000000000000000003235 208.0
CMS3_k127_5986718_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000003336 143.0
CMS3_k127_5986718_4 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000005474 111.0
CMS3_k127_5986718_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000002396 112.0
CMS3_k127_5986718_6 CopC domain K07156 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000002596 62.0
CMS3_k127_5986718_7 - - - - 0.0009411 50.0
CMS3_k127_5990519_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 362.0
CMS3_k127_5990519_1 tRNA synthetases class II (D, K and N) K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.00000000000000000000000002715 111.0
CMS3_k127_5990519_2 Kelch repeat-containing protein - - - 0.0000497 55.0
CMS3_k127_599492_0 Stage II sporulation protein M - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 358.0
CMS3_k127_599492_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 327.0
CMS3_k127_599492_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000005477 166.0
CMS3_k127_599492_3 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.0000000000000000000000000000000000005364 154.0
CMS3_k127_599492_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000001678 131.0
CMS3_k127_599492_5 PFAM cyclic nucleotide-binding - - - 0.0002839 44.0
CMS3_k127_5999075_0 - K01992 - - 0.00000000000000000002976 99.0
CMS3_k127_5999075_1 Domain of unknown function (DUF4340) - - - 0.0009007 49.0
CMS3_k127_5999598_0 histone H2A K63-linked ubiquitination - - - 0.0000000000008659 75.0
CMS3_k127_6001590_0 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 296.0
CMS3_k127_6003235_0 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 402.0
CMS3_k127_6003235_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000001822 119.0
CMS3_k127_6003929_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 492.0
CMS3_k127_6003929_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 377.0
CMS3_k127_6003929_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 345.0
CMS3_k127_6003929_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000009602 176.0
CMS3_k127_6003929_4 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000001057 134.0
CMS3_k127_6003929_5 Peptidase family S49 K04773 - - 0.0000000000000000000000003298 109.0
CMS3_k127_6003929_6 NAD dependent epimerase dehydratase family protein K01784 - 5.1.3.2 0.000355 46.0
CMS3_k127_6010488_0 diguanylate cyclase - - - 0.000000000000000000000000000000000000001089 161.0
CMS3_k127_6018192_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 402.0
CMS3_k127_6018192_1 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000003374 191.0
CMS3_k127_6026210_0 - - - - 0.000000000000000002858 89.0
CMS3_k127_6033328_0 response regulator, receiver K02479 - - 0.0000000000000000000000000000000000000000000000000000005908 199.0
CMS3_k127_6033328_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000005245 204.0
CMS3_k127_6033328_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0016020,GO:0019222,GO:0030312,GO:0040007,GO:0043388,GO:0044093,GO:0044464,GO:0050789,GO:0051098,GO:0051099,GO:0051101,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:2000677,GO:2000679 - 0.0007477 48.0
CMS3_k127_6038968_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000004242 181.0
CMS3_k127_6040908_0 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002614 285.0
CMS3_k127_6040908_1 transposition K07497 - - 0.00000000000000000000000000000000000000000000000003418 190.0
CMS3_k127_6040908_2 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.000000000000000000000000000000000000000000002934 172.0
CMS3_k127_6040908_3 sensor histidine kinase response regulator - - - 0.0000000000003555 75.0
CMS3_k127_6057991_0 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000001484 196.0
CMS3_k127_6057991_1 GUN4-like - - - 0.00000000000000000000000000000009223 134.0
CMS3_k127_6058251_0 Peptidase family C69 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 506.0
CMS3_k127_6058251_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 343.0
CMS3_k127_6067890_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 570.0
CMS3_k127_6067890_1 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 430.0
CMS3_k127_6067890_2 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000001169 184.0
CMS3_k127_6067890_3 PFAM Dimethylmenaquinone methyltransferase K10218 - 4.1.3.17 0.00002997 47.0
CMS3_k127_6077341_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000004448 198.0
CMS3_k127_6077341_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000006473 180.0
CMS3_k127_6077341_2 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000003184 171.0
CMS3_k127_6082768_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 385.0
CMS3_k127_6082768_1 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 322.0
CMS3_k127_6082768_2 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001055 290.0
CMS3_k127_6082768_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000004767 202.0
CMS3_k127_6082768_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000003096 73.0
CMS3_k127_608479_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000007868 209.0
CMS3_k127_608479_1 - - - - 0.00000000000000000000000000000000003706 137.0
CMS3_k127_608479_2 peptidase activity K01286 - 3.4.16.4 0.00000002138 66.0
CMS3_k127_608479_3 NapC/NirT cytochrome c family, N-terminal region - - - 0.00001072 49.0
CMS3_k127_608479_4 domain, Protein - - - 0.0002168 53.0
CMS3_k127_6086491_0 UDP-glucoronosyl and UDP-glucosyl transferase K05841 - 2.4.1.173 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 423.0
CMS3_k127_6086491_1 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.0000000003595 63.0
CMS3_k127_6088526_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 404.0
CMS3_k127_6088526_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 322.0
CMS3_k127_6088526_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000139 198.0
CMS3_k127_6088526_3 - - - - 0.0000000000000000000000000000000000000000000002899 188.0
CMS3_k127_6089153_0 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000000001255 139.0
CMS3_k127_6089153_1 peptidase activity - - - 0.000000000000000000000000000000003182 141.0
CMS3_k127_6100952_0 PFAM Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 301.0
CMS3_k127_6100952_1 ATPase family associated with various cellular activities (AAA) - - - 0.0005006 48.0
CMS3_k127_610470_0 radical SAM domain protein K09711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 367.0
CMS3_k127_610470_1 radical SAM K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000004442 235.0
CMS3_k127_611684_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003852 247.0
CMS3_k127_611684_1 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000008449 245.0
CMS3_k127_6119939_0 methyltransferase - - - 0.000000000007808 70.0
CMS3_k127_6119939_1 Benzoate membrane transport protein K05782 - - 0.000000006149 61.0
CMS3_k127_6132589_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 450.0
CMS3_k127_6133697_0 PAS domain K07652 - 2.7.13.3 0.00000000000000000000000000000000621 135.0
CMS3_k127_6133697_1 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000001524 120.0
CMS3_k127_6134166_0 ABC transporter K09817,K11607,K11710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 325.0
CMS3_k127_6134166_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000007303 158.0
CMS3_k127_6134166_2 hydrocarbon binding protein (contains V4R domain) - - - 0.0000000003911 67.0
CMS3_k127_6134166_3 ABC-3 protein K09819 - - 0.000000004052 59.0
CMS3_k127_6143178_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 1.074e-243 764.0
CMS3_k127_6143178_1 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 343.0
CMS3_k127_6143178_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 290.0
CMS3_k127_6143178_3 response regulator - - - 0.000000000000001131 90.0
CMS3_k127_6143178_4 - - - - 0.00000000000005742 81.0
CMS3_k127_6143306_0 Psort location Cytoplasmic, score 8.87 K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 471.0
CMS3_k127_6143306_1 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 304.0
CMS3_k127_6144974_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 327.0
CMS3_k127_6144974_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.00000000000000000000000001122 113.0
CMS3_k127_6144974_2 acetyl propionyl-CoA carboxylase, alpha subunit - - - 0.00000000000000003132 88.0
CMS3_k127_6150319_0 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002784 280.0
CMS3_k127_6150319_1 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.00000000000000000000000000000000000000000000001895 179.0
CMS3_k127_6150319_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000001321 151.0
CMS3_k127_6150319_3 PFAM BMC domain - - - 0.0000000000000000000000000013 111.0
CMS3_k127_6167392_0 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 280.0
CMS3_k127_6167392_1 arsR family transcriptional regulator K21903 - - 0.0000000000000000000000008327 107.0
CMS3_k127_6176422_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000004989 103.0
CMS3_k127_6177443_0 Lipoate-protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006628 283.0
CMS3_k127_6177443_1 radical SAM K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000007366 209.0
CMS3_k127_6179804_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000001641 159.0
CMS3_k127_6179804_1 phosphoprotein phosphatase activity K01090 - 3.1.3.16 0.00000000000000000000000000000000001099 143.0
CMS3_k127_6181398_0 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007735 269.0
CMS3_k127_6181398_1 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000003863 254.0
CMS3_k127_6181398_2 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00000000000000000000000000000000000000000000000000000003029 211.0
CMS3_k127_6181398_3 Putative inner membrane exporter, YdcZ K09936 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000001154 138.0
CMS3_k127_6181398_4 WD40-like Beta Propeller Repeat - - - 0.000001831 56.0
CMS3_k127_6185572_0 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001092 279.0
CMS3_k127_6185572_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001323 292.0
CMS3_k127_6185572_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000006522 235.0
CMS3_k127_6185572_3 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000006925 238.0
CMS3_k127_6185572_4 oxidation-reduction process - - - 0.0000000000000000000000000000000000554 137.0
CMS3_k127_6185572_5 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000001056 119.0
CMS3_k127_6185572_6 PFAM PDZ DHR GLGF domain protein - - - 0.000000000000000000004508 104.0
CMS3_k127_6185572_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0002762 51.0
CMS3_k127_6191020_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 503.0
CMS3_k127_6191020_1 Cytochrome c K17222 - - 0.0000000000000000000000000000000000000003312 160.0
CMS3_k127_6191020_2 Cytochrome c - - - 0.00000000000000000000000000001925 128.0
CMS3_k127_6194524_0 LVIVD repeat - - - 0.000000000000000000000000000000000000005153 168.0
CMS3_k127_6199227_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 383.0
CMS3_k127_6199227_1 cytidyltransferase-related domain - - - 0.00000000000000000000000000000000000000000000000000003761 193.0
CMS3_k127_6202671_0 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 408.0
CMS3_k127_6202671_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 311.0
CMS3_k127_6205672_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000007002 217.0
CMS3_k127_6208832_0 Glycosyltransferase family 28 N-terminal domain K05841 - 2.4.1.173 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 369.0
CMS3_k127_6210566_0 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000002799 228.0
CMS3_k127_6215853_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 482.0
CMS3_k127_6215853_1 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 396.0
CMS3_k127_6215853_2 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.000000000000000265 83.0
CMS3_k127_6220401_0 Acyl-CoA dehydrogenase, N-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 427.0
CMS3_k127_6220401_1 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000004556 130.0
CMS3_k127_6220766_0 Leucyl aminopeptidase (Aminopeptidase T) K19689 - - 0.000000000000000000000000000000000000001919 148.0
CMS3_k127_6220766_1 Serine threonine protein kinase - - - 0.0000000000000000000000000000000001673 138.0
CMS3_k127_6220766_2 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.000000000000000000000000000000001428 141.0
CMS3_k127_6225068_0 Glucose dehydrogenase C-terminus K00008,K00060 - 1.1.1.103,1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 321.0
CMS3_k127_6225068_1 transcriptional regulator - - - 0.0002845 44.0
CMS3_k127_6227212_0 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000007646 196.0
CMS3_k127_6227212_1 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000001862 54.0
CMS3_k127_6230252_0 SMART AAA ATPase K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 420.0
CMS3_k127_6230252_1 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000008586 165.0
CMS3_k127_6230252_2 PFAM O-antigen polymerase - - - 0.0000000000000000000000000000000000000001089 160.0
CMS3_k127_6230252_3 GtrA-like protein - - - 0.00000000000000000000000000000002811 134.0
CMS3_k127_6230252_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000001326 89.0
CMS3_k127_623096_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000003992 177.0
CMS3_k127_6235038_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 370.0
CMS3_k127_6235038_1 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000009578 162.0
CMS3_k127_6235038_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000002553 72.0
CMS3_k127_6235596_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 283.0
CMS3_k127_6235596_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000001706 167.0
CMS3_k127_6235596_2 TfoX N-terminal domain - - - 0.00000001733 60.0
CMS3_k127_623601_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000001162 192.0
CMS3_k127_623601_1 Belongs to the bacterial solute-binding protein 3 family K02030,K02424 - - 0.000000000000000000000000000000004184 138.0
CMS3_k127_6238315_0 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 503.0
CMS3_k127_6238315_1 Heparinase II/III N-terminus - - - 0.0003084 50.0
CMS3_k127_6238608_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001049 259.0
CMS3_k127_6238608_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002383 233.0
CMS3_k127_6238608_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000004225 194.0
CMS3_k127_6238608_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000001072 156.0
CMS3_k127_6242592_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 329.0
CMS3_k127_6242592_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000006966 246.0
CMS3_k127_6242592_2 Transposase K07492 - - 0.00000005473 53.0
CMS3_k127_6243026_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003346 286.0
CMS3_k127_6243026_1 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006998 242.0
CMS3_k127_624500_0 catalytic domain of components of various dehydrogenase complexes K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000301 239.0
CMS3_k127_624500_1 heme binding K21472 - - 0.00000000000000000000000000000000000000079 150.0
CMS3_k127_624794_0 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000022 268.0
CMS3_k127_624794_1 translation initiation factor activity - - - 0.000000000000000000000004219 105.0
CMS3_k127_6251500_0 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00184 - - 0.00000000000000000000000000000000000000000000000000000000005522 214.0
CMS3_k127_6251500_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000002333 184.0
CMS3_k127_6251500_2 Cytochrome c554 and c-prime - - - 0.000000000003249 78.0
CMS3_k127_6256088_0 Pfam:DUF2305 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001804 244.0
CMS3_k127_6256088_1 NUBPL iron-transfer P-loop NTPase - - - 0.0000000000000000000000000000000000000000000000000000000000005703 214.0
CMS3_k127_6256130_0 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 368.0
CMS3_k127_6256130_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000006464 223.0
CMS3_k127_6256130_2 maltose binding K02027,K15770 - - 0.000000000000000004703 92.0
CMS3_k127_6258020_0 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 6.966e-195 614.0
CMS3_k127_6258020_1 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 443.0
CMS3_k127_6258020_2 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 381.0
CMS3_k127_6258020_3 - K07092 - - 0.00000000000000000000000000000000000000000000000000000001242 199.0
CMS3_k127_6258020_4 - - - - 0.0000000000000000000000000001369 121.0
CMS3_k127_6258020_5 DsrE/DsrF/DrsH-like family - - - 0.000000007774 56.0
CMS3_k127_6259396_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000164 111.0
CMS3_k127_6259396_1 Psort location Cytoplasmic, score - - - 0.00000000000000000000001661 104.0
CMS3_k127_6267178_1 - - - - 0.0002001 48.0
CMS3_k127_6271846_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 369.0
CMS3_k127_6271846_1 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000007184 229.0
CMS3_k127_627500_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000002308 241.0
CMS3_k127_627500_1 Domain of unknown function (DUF4111) - - - 0.000000000000000000000000000000000000004884 153.0
CMS3_k127_6275307_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000733 265.0
CMS3_k127_6283133_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family K00558 - 2.1.1.37 0.0000000000000000000000000000000000000000000000000000006976 205.0
CMS3_k127_6283578_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.433e-209 658.0
CMS3_k127_6283578_1 acetyltransferase K00950,K03789,K03823 - 2.3.1.128,2.3.1.183,2.7.6.3 0.00000000000000000000000000000000006158 143.0
CMS3_k127_6287681_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 449.0
CMS3_k127_6287681_1 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000004687 205.0
CMS3_k127_6290147_0 TIGRFAM integral membrane protein TIGR01906 - - - 0.00000000000000000000000000000000001153 143.0
CMS3_k127_6290147_1 PFAM response regulator receiver - - - 0.0000000000000000001976 95.0
CMS3_k127_6290147_2 Bacterial transcriptional activator domain - - - 0.000005255 59.0
CMS3_k127_6294821_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 316.0
CMS3_k127_6294821_1 - - - - 0.000000000000001263 90.0
CMS3_k127_6299499_0 PFAM Pentapeptide repeats (8 copies) - - - 0.000000003394 63.0
CMS3_k127_6299499_1 MerR HTH family regulatory protein K11686 - - 0.0005125 49.0
CMS3_k127_6300990_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
CMS3_k127_6300990_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000009914 135.0
CMS3_k127_6300990_2 Phosphate transporter family K03306 - - 0.00000000000001061 77.0
CMS3_k127_6303000_0 PFAM transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000000000000000000000000000003284 241.0
CMS3_k127_6303000_1 divalent heavy-metal cations transporter K07238 - - 0.000000000000000000000000000000000000000000000000004037 190.0
CMS3_k127_6303000_2 Bacterial regulatory protein, Fis family K13599 - - 0.0000000004458 63.0
CMS3_k127_6314488_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000003479 250.0
CMS3_k127_6314488_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001469 213.0
CMS3_k127_6314488_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000008221 181.0
CMS3_k127_6314488_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000009775 164.0
CMS3_k127_632055_0 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000553 286.0
CMS3_k127_6329494_0 Haem-binding domain - - - 0.000000000000000000000000000000000006507 141.0
CMS3_k127_6329494_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000007551 122.0
CMS3_k127_6332561_0 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000005081 226.0
CMS3_k127_6332561_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000002003 115.0
CMS3_k127_6333247_0 ABC transporter, substratebinding protein K10232 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 380.0
CMS3_k127_6333247_1 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000004811 151.0
CMS3_k127_6333247_2 PFAM regulatory protein TetR - - - 0.0000000000000000000000003726 109.0
CMS3_k127_6333826_0 FES K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000279 271.0
CMS3_k127_6333826_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000009793 203.0
CMS3_k127_6333826_2 DUF218 domain - - - 0.0000000000000000000000000000000000000007779 157.0
CMS3_k127_6333826_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00001069 57.0
CMS3_k127_6335132_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 471.0
CMS3_k127_6341021_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000001511 261.0
CMS3_k127_6341021_1 Hypothetical methyltransferase - - - 0.000000000000000000000000005366 116.0
CMS3_k127_6341021_2 Aminoglycoside phosphotransferase - - - 0.0000000000000000000747 95.0
CMS3_k127_6344182_0 PFAM peptidase M14, carboxypeptidase A - - - 0.0000000000000000000000000000000005229 143.0
CMS3_k127_6344182_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000003237 64.0
CMS3_k127_6344182_2 PFAM Forkhead-associated protein - - - 0.00000003003 63.0
CMS3_k127_6345636_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000008944 123.0
CMS3_k127_634651_0 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 532.0
CMS3_k127_634651_1 ArgJ family K00620,K00930 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006375 382.0
CMS3_k127_634651_2 TIGRFAM acetylornithine and succinylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002706 284.0
CMS3_k127_634651_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000998 249.0
CMS3_k127_634651_4 TIGRFAM acetylornithine and succinylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000003471 189.0
CMS3_k127_634651_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000004266 171.0
CMS3_k127_634651_6 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.0000000000000000000000000000001923 128.0
CMS3_k127_634671_0 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 509.0
CMS3_k127_634671_1 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000001788 173.0
CMS3_k127_6355405_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000274 121.0
CMS3_k127_6355405_1 PFAM Forkhead-associated protein - - - 0.00000000000000000000241 98.0
CMS3_k127_636152_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 344.0
CMS3_k127_636152_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000001229 185.0
CMS3_k127_636152_2 PFAM Divergent PAP2 family K09775 - - 0.000000000000000000000000000000001088 135.0
CMS3_k127_636152_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000588 56.0
CMS3_k127_6364355_0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 305.0
CMS3_k127_6364355_1 diguanylate cyclase activity K02000,K04767,K05847,K07168,K09137 - 3.6.3.32 0.0000001569 59.0
CMS3_k127_636689_0 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000001943 91.0
CMS3_k127_636689_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000008558 64.0
CMS3_k127_636689_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00009677 52.0
CMS3_k127_6367386_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 307.0
CMS3_k127_6367386_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000007909 221.0
CMS3_k127_6367386_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000003594 166.0
CMS3_k127_6378533_0 methyl-accepting chemotaxis protein K03406 - - 0.0000005868 63.0
CMS3_k127_6379260_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 2.168e-293 911.0
CMS3_k127_6382244_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 317.0
CMS3_k127_6382244_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000003364 196.0
CMS3_k127_638386_0 Wd40 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004185 246.0
CMS3_k127_638386_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000003913 168.0
CMS3_k127_6384128_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000008208 137.0
CMS3_k127_6384128_1 - - - - 0.000000000000009683 81.0
CMS3_k127_6384128_2 transcriptional regulator - - - 0.0000000000001002 76.0
CMS3_k127_6384128_3 - - - - 0.00000000001233 70.0
CMS3_k127_6384128_4 metalloendopeptidase activity K03799 - - 0.00000001554 66.0
CMS3_k127_6388361_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 422.0
CMS3_k127_6409520_0 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 363.0
CMS3_k127_6409520_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000003863 143.0
CMS3_k127_6412450_0 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001943 253.0
CMS3_k127_6418187_0 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 336.0
CMS3_k127_6422550_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000004554 147.0
CMS3_k127_6422550_1 WD-40 repeat - - - 0.00000000000005011 81.0
CMS3_k127_6432711_0 phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 314.0
CMS3_k127_6433196_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 9.746e-203 652.0
CMS3_k127_6433196_1 protein histidine kinase activity K01768,K02484,K07636,K10681,K10819,K18350,K20487 - 2.7.13.3,4.6.1.1 0.000000000000000000000000000000000000002157 169.0
CMS3_k127_6438858_0 one-carbon metabolic process K00194,K00198 - 1.2.7.4,2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 327.0
CMS3_k127_6438858_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000002178 49.0
CMS3_k127_6446072_0 Von willebrand factor, type a - - - 0.00000000000000000000000000000000000000000000000000000000000000000004085 250.0
CMS3_k127_6446072_1 domain, Protein - - - 0.0003317 53.0
CMS3_k127_644882_0 PFAM Auxin Efflux Carrier K07088 - - 0.0000000000000000000000000000000000000000000001241 179.0
CMS3_k127_644882_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00009176 48.0
CMS3_k127_6449672_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 360.0
CMS3_k127_6449672_1 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000003725 65.0
CMS3_k127_6450000_0 PFAM ABC transporter related K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 418.0
CMS3_k127_6450000_1 PFAM ABC transporter related K06158 - - 0.00000000000000000000000000000000000000000000000000000000006692 209.0
CMS3_k127_6450000_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000001347 149.0
CMS3_k127_6450000_3 Integral membrane sensor hybrid histidine kinase - - - 0.000000000000000003658 93.0
CMS3_k127_6450691_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002209 255.0
CMS3_k127_6450691_1 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.00000006116 60.0
CMS3_k127_6452881_0 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000003815 92.0
CMS3_k127_6452881_1 Haloacid dehalogenase-like hydrolase K07025,K18569 - - 0.00000000000000002081 90.0
CMS3_k127_6452881_2 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000002512 63.0
CMS3_k127_6462595_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 327.0
CMS3_k127_6462595_1 PFAM CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 317.0
CMS3_k127_6462595_2 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005881 258.0
CMS3_k127_6475613_0 - - - - 0.0000000000000000002514 101.0
CMS3_k127_6486003_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 303.0
CMS3_k127_6499417_0 heat shock protein 70 - - - 0.000000000000000000000000000000000000000000000000000000000000000006655 237.0
CMS3_k127_650704_0 sh3 domain protein - - - 0.0000000000000000000000064 115.0
CMS3_k127_650704_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000000000000000698 90.0
CMS3_k127_650704_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0001298 49.0
CMS3_k127_6515542_0 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000003673 204.0
CMS3_k127_6515542_1 Domain of unknown function (DUF4872) - - - 0.000000000000000000000000000000000000000000000001519 181.0
CMS3_k127_6515585_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 288.0
CMS3_k127_6518577_0 aminopeptidase activity - - - 0.000000000000000000002527 103.0
CMS3_k127_6526758_0 PFAM fumarate lyase K01679 - 4.2.1.2 5.6e-202 636.0
CMS3_k127_6526758_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000005274 207.0
CMS3_k127_6528815_0 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006715 259.0
CMS3_k127_6539447_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 573.0
CMS3_k127_6539447_1 PFAM Roadblock LC7 family protein K07131 - - 0.00000000000000000000000000000000000000000000000008209 180.0
CMS3_k127_6555284_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 368.0
CMS3_k127_6555284_1 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000004002 115.0
CMS3_k127_6556519_0 Cytochrome b(N-terminal)/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005428 262.0
CMS3_k127_6556519_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001174 232.0
CMS3_k127_6556519_2 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000006531 216.0
CMS3_k127_6556519_3 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000000009498 156.0
CMS3_k127_6556519_4 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.0000000000000000000000000000000000008131 144.0
CMS3_k127_6556519_5 Cytochrome c - - - 0.00000000000000000000000000002523 126.0
CMS3_k127_6556519_6 methyltransferase - - - 0.000000000000000000000000009787 124.0
CMS3_k127_6556519_7 acetyltransferase K03789 - 2.3.1.128 0.000000000000000001176 92.0
CMS3_k127_6556519_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000005188 81.0
CMS3_k127_6560941_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 494.0
CMS3_k127_6560941_1 Histidine kinase - - - 0.00000000000000000000158 100.0
CMS3_k127_6561799_0 Sodium hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002023 270.0
CMS3_k127_6564922_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 471.0
CMS3_k127_6564922_1 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000008689 164.0
CMS3_k127_6567721_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 4.25e-258 821.0
CMS3_k127_6567721_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 373.0
CMS3_k127_6573604_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 497.0
CMS3_k127_6573604_1 Immune inhibitor A peptidase M6 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 435.0
CMS3_k127_6576308_0 Histidine kinase - - - 0.000000000000000000000000000000002506 141.0
CMS3_k127_6592710_0 PFAM Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000001344 232.0
CMS3_k127_6592710_1 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000001836 219.0
CMS3_k127_6592710_2 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000000000000000000000002455 199.0
CMS3_k127_6592710_3 Cytochrome c - - - 0.0000000129 64.0
CMS3_k127_6599652_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 347.0
CMS3_k127_6599652_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000168 213.0
CMS3_k127_660203_0 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000122 128.0
CMS3_k127_6604782_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04127,K11325,K21174 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 382.0
CMS3_k127_6604782_1 PFAM NmrA family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001337 243.0
CMS3_k127_6626476_0 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000001131 199.0
CMS3_k127_6626476_1 - - - - 0.0000000000000000000000000000003811 129.0
CMS3_k127_6626476_2 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000002218 110.0
CMS3_k127_6626476_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000815 91.0
CMS3_k127_6626476_4 peptidylprolyl isomerase K03770 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 0.00002618 56.0
CMS3_k127_6626476_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0007031 47.0
CMS3_k127_662758_0 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 305.0
CMS3_k127_6631566_0 - - - - 0.000000000000000000000000000000007149 140.0
CMS3_k127_6633791_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007579 225.0
CMS3_k127_6635757_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 404.0
CMS3_k127_6637058_0 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 318.0
CMS3_k127_6637058_1 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001616 270.0
CMS3_k127_663866_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 470.0
CMS3_k127_663866_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000171 147.0
CMS3_k127_663866_2 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000002876 111.0
CMS3_k127_663866_3 Cytochrome c - - - 0.0000000000000000001338 101.0
CMS3_k127_663866_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000004352 61.0
CMS3_k127_663866_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000003154 62.0
CMS3_k127_6639173_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 494.0
CMS3_k127_6639173_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 449.0
CMS3_k127_6639173_2 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 390.0
CMS3_k127_6639173_3 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000007987 244.0
CMS3_k127_6641025_0 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002477 266.0
CMS3_k127_6644832_0 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 450.0
CMS3_k127_6644832_1 Neurotransmitter-gated ion-channel ligand binding domain - - - 0.000000000000000000000000000000000000000002249 165.0
CMS3_k127_6650525_0 PFAM cobalbumin biosynthesis protein K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000000000000007559 200.0
CMS3_k127_6650525_1 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000001516 139.0
CMS3_k127_6655119_0 ATPases involved in chromosome partitioning K03496 - - 0.0000000006843 67.0
CMS3_k127_6659899_0 Glycosyl transferase, family 2 K15762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 369.0
CMS3_k127_6659899_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003715 254.0
CMS3_k127_6678814_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 324.0
CMS3_k127_6678814_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000007075 169.0
CMS3_k127_6678814_2 PFAM glycoside hydrolase family 39 - - - 0.000000002038 59.0
CMS3_k127_668246_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 619.0
CMS3_k127_668246_1 phospholipase Carboxylesterase K06999 - - 0.00002315 47.0
CMS3_k127_6684379_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 291.0
CMS3_k127_6684379_1 PFAM Activator of Hsp90 ATPase - - - 0.000000000000000000000000000001103 125.0
CMS3_k127_6684379_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000001318 121.0
CMS3_k127_6689004_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.481e-309 961.0
CMS3_k127_6695112_0 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 8.33e-209 678.0
CMS3_k127_6695112_1 acetyltransferase K17840 - 2.3.1.59 0.00000000000000000006532 94.0
CMS3_k127_6707566_0 Rdx family K07401 - - 0.00000000001345 66.0
CMS3_k127_6707566_1 Transglutaminase-like superfamily - - - 0.00000007703 64.0
CMS3_k127_6707566_2 Universal stress protein - - - 0.0008138 45.0
CMS3_k127_671127_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000001862 167.0
CMS3_k127_671127_1 anaphase-promoting complex binding - - - 0.0000000000000000001269 94.0
CMS3_k127_6713165_0 MFS_1 like family K08151,K08153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005539 274.0
CMS3_k127_6713165_1 esterase K07017 - - 0.000001893 53.0
CMS3_k127_6732083_0 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000001409 179.0
CMS3_k127_6732083_1 LytTr DNA-binding domain K02477 - - 0.0005415 48.0
CMS3_k127_6747136_0 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000001549 209.0
CMS3_k127_6747136_1 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000000000008699 188.0
CMS3_k127_6753132_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000006744 183.0
CMS3_k127_6753132_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000001986 83.0
CMS3_k127_6758115_0 PFAM Sporulation stage II, protein E C-terminal K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 307.0
CMS3_k127_6758115_1 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005334 250.0
CMS3_k127_6758115_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000001506 202.0
CMS3_k127_6758115_3 Histidine kinase-like ATPase domain - - - 0.0000000000000000001357 104.0
CMS3_k127_6758115_4 antisigma factor binding K04749,K05946,K06378 - 2.4.1.187 0.000000000000000009972 87.0
CMS3_k127_6758369_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.66e-238 747.0
CMS3_k127_6758369_1 PFAM Serine threonine protein kinase-related K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
CMS3_k127_6758369_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000001482 219.0
CMS3_k127_6758369_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000005394 205.0
CMS3_k127_6758369_4 PFAM Integrase catalytic region - - - 0.0000000000000000009833 93.0
CMS3_k127_6759645_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000006036 158.0
CMS3_k127_6759645_1 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.0000000000000000000001052 101.0
CMS3_k127_6759645_2 Protein of unknown function (DUF456) K09793 - - 0.000001245 57.0
CMS3_k127_6759645_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0004742 44.0
CMS3_k127_6760852_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000006059 180.0
CMS3_k127_6760852_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000001146 149.0
CMS3_k127_6762592_0 PFAM amine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 451.0
CMS3_k127_6762592_1 PFAM conserved K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 379.0
CMS3_k127_6762592_2 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009406 255.0
CMS3_k127_6762592_3 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.00000000000000000000000000000000000000000000000000000000007025 217.0
CMS3_k127_6762592_4 Methyltransferase domain - - - 0.00000000000000000000002669 110.0
CMS3_k127_6762592_5 Calcineurin-like phosphoesterase K07098 - - 0.0002295 48.0
CMS3_k127_6764625_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000003388 109.0
CMS3_k127_6764625_1 PFAM acylphosphatase K01512 - 3.6.1.7 0.000000000000000003667 87.0
CMS3_k127_6764625_2 - - - - 0.00000000000001364 85.0
CMS3_k127_6769199_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 437.0
CMS3_k127_6769199_1 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 393.0
CMS3_k127_6769199_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001569 280.0
CMS3_k127_6769199_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000539 104.0
CMS3_k127_6769199_4 Cobalt transport protein K16785 - - 0.00000000000000001044 85.0
CMS3_k127_6770650_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 298.0
CMS3_k127_6770650_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000001053 146.0
CMS3_k127_6770650_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000002243 56.0
CMS3_k127_6775383_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003677 248.0
CMS3_k127_6775383_1 COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases K01119,K11751 - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 0.000009998 57.0
CMS3_k127_677783_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000000000003764 168.0
CMS3_k127_677783_1 Cytochrome c - - - 0.00000000000000000000007317 107.0
CMS3_k127_677783_2 subunit of a heme lyase K02200 - - 0.000000000000000001596 89.0
CMS3_k127_6785084_0 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000004235 179.0
CMS3_k127_6785084_1 - - - - 0.00000000000000000000000005497 119.0
CMS3_k127_6785084_2 - - - - 0.0000000000000000000007743 103.0
CMS3_k127_6785084_3 - - - - 0.0000000000000641 86.0
CMS3_k127_6785084_4 - - - - 0.000000001916 66.0
CMS3_k127_6785084_5 response to antibiotic K21463 - - 0.0003247 54.0
CMS3_k127_6786719_0 protein histidine kinase activity K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000007057 179.0
CMS3_k127_6786719_1 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000007289 124.0
CMS3_k127_6786719_2 cheY-homologous receiver domain K02658 - - 0.000000000009996 70.0
CMS3_k127_6790730_0 PFAM Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002447 285.0
CMS3_k127_6790730_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000002363 173.0
CMS3_k127_6813356_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 291.0
CMS3_k127_6819201_0 methyltransferase activity K01369,K17770 GO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008757,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0031974,GO:0031981,GO:0032259,GO:0034968,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:1901564 3.4.22.34 0.000000000628 69.0
CMS3_k127_6821008_0 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000003288 144.0
CMS3_k127_6821008_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000001715 100.0
CMS3_k127_6837932_0 SLBB domain K02237 - - 0.000000000000000000000000000000004129 135.0
CMS3_k127_6837932_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000364 108.0
CMS3_k127_6837932_2 Patatin-like phospholipase - - - 0.00008185 48.0
CMS3_k127_6838047_0 transferase activity, transferring hexosyl groups K05841 - 2.4.1.173 0.000000000000000000000000000000000000000000000000000000000000000406 226.0
CMS3_k127_6838461_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000004519 246.0
CMS3_k127_6838461_1 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000001958 221.0
CMS3_k127_6838461_2 transcriptional regulator, Rrf2 family - - - 0.0000000000000000000001661 102.0
CMS3_k127_6838461_3 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.0001281 53.0
CMS3_k127_6838985_0 thiolester hydrolase activity K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000651 171.0
CMS3_k127_6840634_0 FecCD transport family K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 338.0
CMS3_k127_6840634_1 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000003889 252.0
CMS3_k127_6840634_2 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000001336 220.0
CMS3_k127_6840634_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000187 169.0
CMS3_k127_6840634_4 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000002173 158.0
CMS3_k127_6843792_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000009484 246.0
CMS3_k127_6847892_0 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009577 285.0
CMS3_k127_6847892_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000003392 121.0
CMS3_k127_6857495_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 436.0
CMS3_k127_6857495_1 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000000000007983 171.0
CMS3_k127_6857495_2 formate dehydrogenase (NAD+) activity K00176 - 1.2.7.3 0.000000000000000000003625 96.0
CMS3_k127_6857742_0 B3 4 domain protein - - - 0.0000000000000000000000000000000000000000000000003118 184.0
CMS3_k127_6857742_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001144 136.0
CMS3_k127_6857742_2 Thermophilic metalloprotease (M29) K19689 - - 0.000000000000000000009368 94.0
CMS3_k127_687426_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000002302 198.0
CMS3_k127_687426_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000205 194.0
CMS3_k127_687426_2 ErfK ybiS ycfS ynhG family protein - - - 0.0000002904 60.0
CMS3_k127_6877527_0 trans-aconitate 2-methyltransferase activity K00598,K02169 - 2.1.1.144,2.1.1.197 0.0000000000000000000000000000000000001973 143.0
CMS3_k127_6883435_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 458.0
CMS3_k127_6883435_1 Zinc-binding dehydrogenase K00055,K00121 - 1.1.1.1,1.1.1.284,1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009079 279.0
CMS3_k127_6884591_0 Uridine phosphorylase K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000004424 168.0
CMS3_k127_6884591_1 PFAM Polysaccharide biosynthesis protein - - - 0.0000005304 61.0
CMS3_k127_689277_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 324.0
CMS3_k127_689277_1 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 310.0
CMS3_k127_689277_2 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000001562 206.0
CMS3_k127_6893232_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 381.0
CMS3_k127_6893232_1 Ubiquinone biosynthesis protein UbiA K02548 - 2.5.1.74 0.000000000000000000002029 102.0
CMS3_k127_6893235_0 Protein of unknown function (DUF2652) - - - 0.0000000003456 68.0
CMS3_k127_6893235_1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family - - - 0.000000003114 61.0
CMS3_k127_6896104_0 Mate efflux family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005864 283.0
CMS3_k127_6896149_0 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 340.0
CMS3_k127_6896149_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000005689 124.0
CMS3_k127_6902175_0 phosphogluconate dehydrogenase (decarboxylating) activity K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 422.0
CMS3_k127_6902175_1 4-hydroxy-tetrahydrodipicolinate reductase K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 323.0
CMS3_k127_6902175_2 triphosphatase activity - - - 0.00000000000000000000004751 108.0
CMS3_k127_6905958_0 acetyltransferase K03789,K06323 - 2.3.1.128 0.0000000001793 72.0
CMS3_k127_6907363_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000002276 162.0
CMS3_k127_6907801_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.257e-202 638.0
CMS3_k127_6907801_1 6-phospho-beta-galactosidase activity - - - 0.0000000000000000000001677 104.0
CMS3_k127_6908486_0 HD domain K07814 - - 0.000000000001086 70.0
CMS3_k127_6908486_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000001359 72.0
CMS3_k127_6908486_2 Transcriptional regulatory protein, C terminal K07775 - - 0.000002425 55.0
CMS3_k127_6909162_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000001974 152.0
CMS3_k127_6909162_2 CarD-like/TRCF domain K07736 - - 0.0000000000000162 80.0
CMS3_k127_6909162_3 PFAM AhpC TSA family K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0000002631 55.0
CMS3_k127_6913137_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000005614 218.0
CMS3_k127_6922799_0 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 518.0
CMS3_k127_6930387_0 Two component transcriptional regulator, winged helix family K07657 - - 0.000000000000000000000000000000000000000000000001595 180.0
CMS3_k127_6930387_1 TadE-like protein - - - 0.00000009635 63.0
CMS3_k127_6942890_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000004157 205.0
CMS3_k127_6942890_1 PFAM low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000009428 91.0
CMS3_k127_6943964_0 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000009914 224.0
CMS3_k127_6943964_1 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000007117 214.0
CMS3_k127_6943964_2 DinB superfamily - - - 0.0009561 48.0
CMS3_k127_6944141_0 - - - - 0.0000000000000000000000000000209 121.0
CMS3_k127_694503_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 397.0
CMS3_k127_694503_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001226 256.0
CMS3_k127_694503_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001259 200.0
CMS3_k127_694503_3 Response regulator containing CheY-like receiver and SARP domains - - - 0.000000001683 61.0
CMS3_k127_695036_0 PFAM Alcohol dehydrogenase zinc-binding domain protein K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 313.0
CMS3_k127_695036_1 HNH endonuclease K07454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001654 258.0
CMS3_k127_695036_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000005486 115.0
CMS3_k127_6962096_0 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001772 283.0
CMS3_k127_6966132_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 4.099e-224 720.0
CMS3_k127_6966132_1 Pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 602.0
CMS3_k127_6966132_2 Psort location CytoplasmicMembrane, score K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.000000000000000000000000000000000000000000000000000000005171 226.0
CMS3_k127_696926_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000005009 172.0
CMS3_k127_696926_1 Protease prsW family - - - 0.00000000000000000000000002765 116.0
CMS3_k127_696926_2 Cysteine-rich secretory protein family - - - 0.00000009269 62.0
CMS3_k127_6974457_0 Transcriptional K07729 - - 0.0000000000000000000000000001136 116.0
CMS3_k127_6974457_1 - - - - 0.0000001111 59.0
CMS3_k127_6975499_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 1.212e-198 641.0
CMS3_k127_6976628_0 heat shock protein 70 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009217 289.0
CMS3_k127_6983851_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000007974 124.0
CMS3_k127_6983851_1 VanZ like family - - - 0.0000000000001473 77.0
CMS3_k127_6983851_2 - - - - 0.000000002025 65.0
CMS3_k127_7000906_0 SMART Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 368.0
CMS3_k127_700366_0 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 310.0
CMS3_k127_700366_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000003624 176.0
CMS3_k127_700366_2 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.000000000002035 70.0
CMS3_k127_7010026_0 TIR domain K12132 - 2.7.11.1 0.000000000000000000000000000008186 132.0
CMS3_k127_7010026_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000001615 107.0
CMS3_k127_701540_0 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001002 282.0
CMS3_k127_701540_1 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001573 252.0
CMS3_k127_701540_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000001301 168.0
CMS3_k127_701540_3 Cytochrome b subunit of the bc complex K02637 - - 0.00000000000000000001591 96.0
CMS3_k127_701540_4 Rieske [2Fe-2S] domain - - - 0.0000000000000000008226 89.0
CMS3_k127_7023968_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000004494 221.0
CMS3_k127_7023968_1 Peptidase family M1 domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000001638 168.0
CMS3_k127_7023968_2 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - - - 0.0000000000000000000004111 110.0
CMS3_k127_7026289_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.881e-200 631.0
CMS3_k127_7026289_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 348.0
CMS3_k127_703282_0 PFAM Transglutaminase-like superfamily K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000005418 223.0
CMS3_k127_7035331_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 318.0
CMS3_k127_7035331_1 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009427 280.0
CMS3_k127_704218_0 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 419.0
CMS3_k127_704218_1 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000003192 182.0
CMS3_k127_704218_2 - - - - 0.0000001403 58.0
CMS3_k127_7045432_0 Histidine kinase - - - 0.00000000000000000001312 105.0
CMS3_k127_7046851_0 von Willebrand factor, type A - - - 0.0000000000123 78.0
CMS3_k127_7046851_1 Forkhead associated domain - - - 0.0000000000493 76.0
CMS3_k127_7046851_2 Forkhead associated domain - - - 0.000003707 57.0
CMS3_k127_7056333_0 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000003383 220.0
CMS3_k127_7056333_1 - - - - 0.000000000000000000000000000000000000000000000000000002814 201.0
CMS3_k127_7056333_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.000000000000000000001224 104.0
CMS3_k127_7056333_3 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 0.000000000000005079 76.0
CMS3_k127_7056333_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000199 74.0
CMS3_k127_7059831_0 PFAM Stage II sporulation E family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000008678 231.0
CMS3_k127_7059831_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.0000000000000000000000006594 110.0
CMS3_k127_7059831_2 FAD dependent oxidoreductase K00273 - 1.4.3.3 0.000000000000000002672 87.0
CMS3_k127_7060428_0 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 309.0
CMS3_k127_7060428_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000008561 177.0
CMS3_k127_7060428_2 Cell cycle protein K03588 - - 0.0000000000000000000000000000000000000002156 155.0
CMS3_k127_7074426_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004273 253.0
CMS3_k127_7074426_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000001606 246.0
CMS3_k127_708116_0 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 458.0
CMS3_k127_708116_1 PFAM VWA containing CoxE family protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 411.0
CMS3_k127_708116_2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 368.0
CMS3_k127_708116_3 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 301.0
CMS3_k127_708116_4 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007517 253.0
CMS3_k127_708116_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000001033 95.0
CMS3_k127_708116_6 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000008375 69.0
CMS3_k127_7082762_0 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000003397 237.0
CMS3_k127_7101460_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 2.439e-197 624.0
CMS3_k127_7101460_1 Uncharacterized protein family UPF0029 K00560,K01271 - 2.1.1.45,3.4.13.9 0.00000000000000000000000000000000000000000003427 164.0
CMS3_k127_7110548_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000009625 207.0
CMS3_k127_7110548_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000001438 123.0
CMS3_k127_7110548_2 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000004124 101.0
CMS3_k127_7120848_0 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 310.0
CMS3_k127_7120848_1 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004001 233.0
CMS3_k127_7120848_2 TfoX N-terminal domain - - - 0.0000000000000000000000000000000006979 133.0
CMS3_k127_7120848_3 PFAM Methyltransferase type 12 - - - 0.000000000000000000000000002062 113.0
CMS3_k127_7128242_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 550.0
CMS3_k127_71403_0 Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009179 261.0
CMS3_k127_71403_1 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002033 253.0
CMS3_k127_71403_2 FMN binding - - - 0.0000000000000000000000000000000000000000000000000000000000000001323 227.0
CMS3_k127_71403_3 DNA-binding transcription factor activity K15973 - - 0.0000000000000000000000000000000000001498 151.0
CMS3_k127_71403_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000003141 124.0
CMS3_k127_71403_5 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.0000000000000000000001255 103.0
CMS3_k127_71403_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11959 - - 0.0000000000003428 75.0
CMS3_k127_71403_7 - - - - 0.0000002726 62.0
CMS3_k127_7148523_0 Selenocysteine lyase - - - 0.0002817 44.0
CMS3_k127_7148523_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000715 50.0
CMS3_k127_715160_0 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 299.0
CMS3_k127_715160_1 Protein kinase domain K08884 - 2.7.11.1 0.000001954 56.0
CMS3_k127_7157053_0 PFAM dihydrodipicolinate synthetase K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000001802 211.0
CMS3_k127_7157053_1 Male sterility protein K15891 - 1.1.1.354 0.000000000000000000000000000000000000000001279 168.0
CMS3_k127_7157053_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000000000005518 103.0
CMS3_k127_7165735_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 517.0
CMS3_k127_7176057_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 316.0
CMS3_k127_7176057_1 self proteolysis - - - 0.00000000008223 66.0
CMS3_k127_7179403_0 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000158 198.0
CMS3_k127_7179403_1 redox protein regulator of disulfide bond formation K04063 - - 0.00000000000000000000000000000000000000000002287 165.0
CMS3_k127_7186520_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 1.258e-220 702.0
CMS3_k127_7186520_1 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 426.0
CMS3_k127_7186520_2 GlcNAc-PI de-N-acetylase K16515 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 333.0
CMS3_k127_7186520_3 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0000000000000000000000000000003572 130.0
CMS3_k127_718802_0 heme binding - - - 0.0000000000000000000006636 105.0
CMS3_k127_718802_1 WD40 domain protein beta Propeller K03641 - - 0.0000000000000000008479 89.0
CMS3_k127_7189252_0 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 428.0
CMS3_k127_7189252_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 350.0
CMS3_k127_7189252_2 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16164 - 3.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
CMS3_k127_7189252_3 PFAM Planctomycete cytochrome C - - - 0.0000000001858 67.0
CMS3_k127_7198124_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000709 213.0
CMS3_k127_7198124_1 Membrane dipeptidase (Peptidase family M19) - - - 0.000000000000000000000000000000000000000000003681 181.0
CMS3_k127_7198124_2 Autotransporter beta-domain - - - 0.0000007692 59.0
CMS3_k127_7198884_0 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003333 250.0
CMS3_k127_7198884_1 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000000000003359 179.0
CMS3_k127_7198884_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000004512 98.0
CMS3_k127_7198884_4 PFAM Universal stress protein family - - - 0.00004899 53.0
CMS3_k127_7200951_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 421.0
CMS3_k127_7200951_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 391.0
CMS3_k127_7200951_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001409 260.0
CMS3_k127_7200951_3 Glycosyl transferase 4-like domain K06338,K12995 - 2.4.1.348 0.00000000000000000000000000000001535 142.0
CMS3_k127_7200951_4 ABC transporter K06147,K11085 - - 0.000000000000000001125 86.0
CMS3_k127_7211244_0 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001908 280.0
CMS3_k127_7211244_1 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009327 271.0
CMS3_k127_7211244_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000001417 194.0
CMS3_k127_7211244_3 Transcriptional regulator K06921 - - 0.0000000000000000000000000000000000118 153.0
CMS3_k127_7230689_0 ATP hydrolysis coupled proton transport - - - 0.00000000000000000000000000000000000000000000000000000000000000141 233.0
CMS3_k127_7232321_0 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 310.0
CMS3_k127_7232321_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000001008 192.0
CMS3_k127_7232321_2 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000003533 181.0
CMS3_k127_7238942_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000004638 248.0
CMS3_k127_7239119_0 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 453.0
CMS3_k127_7239119_1 Creatinine amidohydrolase K01470,K22232 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 407.0
CMS3_k127_7239119_2 chlorophyll synthesis pathway protein BchC K00008 - 1.1.1.14 0.000002602 49.0
CMS3_k127_7245957_0 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000166 159.0
CMS3_k127_7267272_0 (FHA) domain - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.0000512 54.0
CMS3_k127_7268214_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 526.0
CMS3_k127_7268214_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 337.0
CMS3_k127_7268492_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 374.0
CMS3_k127_7273767_0 response regulator receiver K07714,K10943 - - 0.0000000000000000000006346 107.0
CMS3_k127_7273767_1 diguanylate cyclase - - - 0.0002601 52.0
CMS3_k127_727820_0 glyoxalase K07104 - 1.13.11.2 0.000000000000000000000000000000000000000001266 164.0
CMS3_k127_727820_1 phosphorelay signal transduction system - - - 0.000000000000000000000277 101.0
CMS3_k127_7284213_0 Glycosyl transferase family 2 K00721,K00786 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 322.0
CMS3_k127_7284213_1 dTDP-4-dehydrorhamnose reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
CMS3_k127_7284213_2 AP endonuclease, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000002314 228.0
CMS3_k127_7284213_3 Glycosyltransferase, group 2 family protein K20534 - - 0.0000006511 57.0
CMS3_k127_7291692_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 466.0
CMS3_k127_7291692_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000003955 68.0
CMS3_k127_730994_0 Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA YnfE K07306 - 1.8.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 404.0
CMS3_k127_730994_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000001751 130.0
CMS3_k127_7310444_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 367.0
CMS3_k127_7310444_1 chromosome segregation K03497 - - 0.0000000000000000000000000000000000002153 153.0
CMS3_k127_7310444_2 ACT domain K09707 - - 0.00000000002381 70.0
CMS3_k127_7310444_3 metal-dependent membrane protease K07052 - - 0.00000000007056 69.0
CMS3_k127_7314114_0 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.0000000000000000000000000000000000000000000000000000000000000001227 228.0
CMS3_k127_7314114_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000002558 193.0
CMS3_k127_7314114_2 Ntpase (Nacht family) K12132 - 2.7.11.1 0.000000000001958 72.0
CMS3_k127_7314114_3 (FHA) domain - - - 0.00000003771 58.0
CMS3_k127_7325421_0 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001181 243.0
CMS3_k127_7325421_1 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000009556 232.0
CMS3_k127_7325421_2 ATP:ADP antiporter activity - - - 0.00000000000002677 86.0
CMS3_k127_7328026_0 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000007004 213.0
CMS3_k127_7328026_1 Psort location Cytoplasmic, score K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000001081 187.0
CMS3_k127_733239_0 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000002811 250.0
CMS3_k127_733239_1 Phage terminase large subunit K06909 - - 0.0000000000000000001362 89.0
CMS3_k127_7336460_0 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 304.0
CMS3_k127_7336460_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000005752 128.0
CMS3_k127_7339750_0 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000004292 258.0
CMS3_k127_7339750_1 Lysin motif - - - 0.0000000006281 69.0
CMS3_k127_7339750_2 FecR protein - - - 0.00000001463 66.0
CMS3_k127_7340907_0 transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 507.0
CMS3_k127_7340907_1 SnoaL-like polyketide cyclase - - - 0.0000002078 56.0
CMS3_k127_7341368_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 539.0
CMS3_k127_7341368_1 AI-2E family transporter - - - 0.00000000000001357 84.0
CMS3_k127_7343562_0 TIGRFAM molybdenum cofactor synthesis domain K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004017 272.0
CMS3_k127_7343562_1 - - - - 0.00000000000000000000000001698 117.0
CMS3_k127_7348964_0 methyltransferase K01921 - 6.3.2.4 3.736e-244 770.0
CMS3_k127_7348964_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000007629 106.0
CMS3_k127_7349613_0 PFAM transposase, IS4 family protein - - - 0.00000000000000000000003418 112.0
CMS3_k127_7349613_1 COG2801 Transposase and inactivated derivatives - - - 0.0000000000582 64.0
CMS3_k127_7351424_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 417.0
CMS3_k127_7351780_0 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007997 284.0
CMS3_k127_7353523_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.0000000000000000000000005491 108.0
CMS3_k127_7353523_1 - - - - 0.0000000000000000000006057 104.0
CMS3_k127_7354241_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000002599 103.0
CMS3_k127_7358372_0 AAA ATPase domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000006072 244.0
CMS3_k127_7358372_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016020,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0030145,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0065007,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000007853 229.0
CMS3_k127_7362946_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 571.0
CMS3_k127_7362946_1 PFAM NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.000000000000000000000000007398 109.0
CMS3_k127_7363822_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 322.0
CMS3_k127_7363822_1 Protein of unknown function (DUF4230) - - - 0.00001222 57.0
CMS3_k127_7363932_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 360.0
CMS3_k127_7368076_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 377.0
CMS3_k127_7368076_1 aminoacyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000001579 150.0
CMS3_k127_737766_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 337.0
CMS3_k127_737766_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000003187 238.0
CMS3_k127_7388032_0 fibronectin type III domain protein - - - 0.00000000000001795 83.0
CMS3_k127_7388179_0 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 525.0
CMS3_k127_7388179_1 - - - - 0.0000000000000000000000000015 115.0
CMS3_k127_7388179_2 tetratricopeptide repeat - - - 0.000000000000000001819 101.0
CMS3_k127_7388179_3 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000116 95.0
CMS3_k127_7388179_4 - - - - 0.000000001742 62.0
CMS3_k127_7388450_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 595.0
CMS3_k127_7388450_1 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000001745 153.0
CMS3_k127_7388450_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000002437 82.0
CMS3_k127_7388450_3 shape-determining protein MreD K03571 - - 0.000000007641 63.0
CMS3_k127_7388450_4 - - - - 0.00001521 52.0
CMS3_k127_739024_0 PFAM Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 403.0
CMS3_k127_739024_1 COG1484 DNA replication protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000006156 239.0
CMS3_k127_739449_0 - - - - 0.000000000000000000000001858 117.0
CMS3_k127_739449_1 amino acid activation for nonribosomal peptide biosynthetic process K06113,K12685 - 3.2.1.99 0.0000000000000000000001119 111.0
CMS3_k127_739449_2 HTH-like domain - - - 0.000000000000001036 78.0
CMS3_k127_739449_3 - K00368,K18683 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.000000002064 70.0
CMS3_k127_7398_0 Squalene-hopene cyclase C-terminal domain K17811 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009267,GO:0009605,GO:0009607,GO:0009975,GO:0009987,GO:0009991,GO:0010350,GO:0016101,GO:0016102,GO:0016114,GO:0016853,GO:0016872,GO:0019637,GO:0031667,GO:0031668,GO:0031669,GO:0033385,GO:0033554,GO:0035439,GO:0035440,GO:0042594,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071496,GO:0071704,GO:0075136,GO:1901576 5.5.1.16 0.0000000000000000000000000000001301 138.0
CMS3_k127_7398_1 Armadillo/beta-catenin-like repeats - - - 0.000002886 57.0
CMS3_k127_7401261_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 309.0
CMS3_k127_7401261_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000001447 134.0
CMS3_k127_7407705_0 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001131 257.0
CMS3_k127_7410292_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002147 274.0
CMS3_k127_7410292_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000001556 165.0
CMS3_k127_7410292_2 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0000000000000000000000000002505 120.0
CMS3_k127_7410292_3 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000000000005328 108.0
CMS3_k127_7410292_4 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.0000000000002517 74.0
CMS3_k127_7410292_5 sh3 domain protein - - - 0.00000004563 59.0
CMS3_k127_7414325_0 StbA protein K18640 - - 0.0001041 53.0
CMS3_k127_7417673_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000004727 148.0
CMS3_k127_7417673_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000007935 99.0
CMS3_k127_7425084_0 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 3.482e-240 757.0
CMS3_k127_7426277_0 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000121 61.0
CMS3_k127_7433572_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000362 66.0
CMS3_k127_7455379_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.109e-271 851.0
CMS3_k127_7455379_1 PFAM cyclic nucleotide-binding - - - 0.00000000000000000002464 98.0
CMS3_k127_7455379_2 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000002006 87.0
CMS3_k127_7462674_0 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000009249 158.0
CMS3_k127_7462674_1 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000001917 119.0
CMS3_k127_7462674_2 Thioesterase-like superfamily K07107 - - 0.000000000000000000001669 100.0
CMS3_k127_7462674_3 PBS lyase HEAT-like repeat - - - 0.0002073 50.0
CMS3_k127_7466990_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 306.0
CMS3_k127_7466990_1 Transposase - - - 0.000000000000000000000001012 106.0
CMS3_k127_7468067_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 300.0
CMS3_k127_7468067_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002442 255.0
CMS3_k127_7470666_0 PFAM Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000002215 170.0
CMS3_k127_7470666_1 DSBA-like thioredoxin domain K21990 - - 0.000000000003279 70.0
CMS3_k127_7473586_0 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000001692 169.0
CMS3_k127_7473586_1 Electron transfer DM13 - - - 0.00000000001643 72.0
CMS3_k127_7477737_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003247 293.0
CMS3_k127_7477737_1 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000004257 213.0
CMS3_k127_7477737_2 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000001621 91.0
CMS3_k127_7479740_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002599 263.0
CMS3_k127_7479740_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000004663 51.0
CMS3_k127_748178_0 glyoxalase III activity K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000001456 168.0
CMS3_k127_748178_1 arsR family - - - 0.000000000000000000002363 94.0
CMS3_k127_748178_2 S53, subtilisin kexin sedolisin - - - 0.0001395 53.0
CMS3_k127_7485717_0 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
CMS3_k127_7485717_1 S-(hydroxymethyl)glutathione dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000001462 178.0
CMS3_k127_7490545_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005176 276.0
CMS3_k127_7490545_1 Ntpase (Nacht family) K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000002269 250.0
CMS3_k127_7490545_2 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.0000000000000000003664 89.0
CMS3_k127_7497675_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 350.0
CMS3_k127_7497675_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
CMS3_k127_7497728_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000003395 225.0
CMS3_k127_7497728_1 PIN domain K18828 - - 0.0005734 46.0
CMS3_k127_7505532_0 Terminase-like family - - - 0.000000000000000000000000000001682 131.0
CMS3_k127_7509603_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 404.0
CMS3_k127_7509603_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000573 124.0
CMS3_k127_7512610_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009872 608.0
CMS3_k127_7517959_0 PFAM AMP-dependent synthetase and ligase K01897,K02182,K22319 - 6.1.3.1,6.2.1.3,6.2.1.48 0.00000000000000000000000000000000000000000000191 172.0
CMS3_k127_7517959_1 Belongs to the peptidase S8 family - - - 0.0000000000000000003683 97.0
CMS3_k127_7522769_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 597.0
CMS3_k127_7522769_1 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000009221 72.0
CMS3_k127_752941_0 CoA-binding protein K06929 - - 0.0000000000000000000000001022 110.0
CMS3_k127_752941_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00005308 54.0
CMS3_k127_7530352_0 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 359.0
CMS3_k127_7530352_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000534 148.0
CMS3_k127_7539518_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 426.0
CMS3_k127_7542608_0 60Kd inner membrane protein K03217 - - 0.00000000000000000000000000000000000000001363 163.0
CMS3_k127_7542608_1 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000001249 162.0
CMS3_k127_7542608_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000006933 116.0
CMS3_k127_7542608_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000002253 91.0
CMS3_k127_7542608_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000001956 64.0
CMS3_k127_7545447_0 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000004605 242.0
CMS3_k127_7545447_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00001036 48.0
CMS3_k127_7547530_0 PFAM type II secretion system protein K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 291.0
CMS3_k127_7547530_1 PFAM type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000326 246.0
CMS3_k127_7547530_2 competence protein - - - 0.00006198 49.0
CMS3_k127_7565505_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 486.0
CMS3_k127_7565505_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000001863 218.0
CMS3_k127_7568299_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000086 213.0
CMS3_k127_7568299_1 Protein of unknown function with PCYCGC motif - - - 0.0000000000000000008594 89.0
CMS3_k127_7568299_3 Protein of unknown function (DUF1573) - - - 0.00000002348 63.0
CMS3_k127_7568299_4 - - - - 0.00000003653 64.0
CMS3_k127_7568299_5 Protein of unknown function with PCYCGC motif - - - 0.0000002356 53.0
CMS3_k127_7568299_6 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275,K02826,K15864 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.10.3.12,1.7.2.1,1.7.99.1,1.9.3.1 0.0000007778 53.0
CMS3_k127_757030_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 461.0
CMS3_k127_757030_1 4Fe-4S binding domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 324.0
CMS3_k127_757030_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000007133 207.0
CMS3_k127_757505_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 329.0
CMS3_k127_757505_1 Glycosyl hydrolases family 43 - - - 0.000000002282 66.0
CMS3_k127_7575070_0 tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 368.0
CMS3_k127_7578282_0 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003377 249.0
CMS3_k127_7578282_1 PFAM PspC domain protein K03973 - - 0.0000000000000004256 80.0
CMS3_k127_7591500_0 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 477.0
CMS3_k127_7591500_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 398.0
CMS3_k127_7591500_2 Domain of unknown function (DUF4260) - - - 0.000000000000000000000000000000000000002032 153.0
CMS3_k127_7608738_0 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000000001211 196.0
CMS3_k127_7608738_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008289,GO:0009405,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0030312,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0043177,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051704,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204 2.3.1.61 0.0000000000000000000000000000000000002132 149.0
CMS3_k127_7608738_2 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000004537 115.0
CMS3_k127_7610121_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000004117 205.0
CMS3_k127_7610121_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000345 202.0
CMS3_k127_7610121_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000004701 160.0
CMS3_k127_7610121_3 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000008172 109.0
CMS3_k127_761027_0 6-phospho-beta-galactosidase activity - - - 0.0000000000000001248 94.0
CMS3_k127_761027_1 Flagellar filament outer layer protein Flaa - - - 0.000000000000001177 91.0
CMS3_k127_761027_2 N-Acetylmuramoyl-L-alanine amidase - - - 0.00000003879 66.0
CMS3_k127_7616271_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 322.0
CMS3_k127_7622645_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 8.089e-229 722.0
CMS3_k127_7622645_1 CoA-binding protein K06929 - - 0.0000000000000000000006462 99.0
CMS3_k127_7631070_0 metalloendopeptidase activity K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 359.0
CMS3_k127_7631070_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833,K03851,K12256,K15372 - 2.6.1.113,2.6.1.55,2.6.1.62,2.6.1.77 0.000000000000000000000000000000000000000000000000003073 189.0
CMS3_k127_7631916_0 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000002314 91.0
CMS3_k127_7632665_0 SnoaL-like domain - - - 0.0000000000000000000000000001473 119.0
CMS3_k127_7633259_1 - - - - 0.000000000000000004221 86.0
CMS3_k127_7633259_2 - - - - 0.00001301 54.0
CMS3_k127_763809_0 Ntpase (Nacht family) K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000001119 207.0
CMS3_k127_774167_0 rhs family - - - 0.000000000000000000000000000000000001887 159.0
CMS3_k127_778645_0 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 547.0
CMS3_k127_779519_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000001419 227.0
CMS3_k127_779519_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000001126 199.0
CMS3_k127_779519_2 spore germination K06382 - 3.1.3.16 0.000000000000000000000000000000000000000001594 166.0
CMS3_k127_779519_3 SMART tyrosine protein kinase K08884 - 2.7.11.1 0.000000000000000000000313 99.0
CMS3_k127_780105_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
CMS3_k127_780105_1 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000007353 207.0
CMS3_k127_790428_0 PFAM Aldehyde dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 338.0
CMS3_k127_790428_1 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004387 282.0
CMS3_k127_790428_2 PFAM zinc finger, SWIM domain protein - - - 0.00000000000000000000000000002314 121.0
CMS3_k127_790428_3 Tetratricopeptide repeat - - - 0.000000005491 63.0
CMS3_k127_798086_0 Permease family K02824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 569.0
CMS3_k127_799748_0 MFS_1 like family K08151,K08153 - - 0.0000000000000000000000000000000000000000000000000000000000000000009037 244.0
CMS3_k127_799748_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000001767 193.0
CMS3_k127_799748_2 Ferric reductase like transmembrane component - - - 0.000000000000000000000000001925 121.0
CMS3_k127_799748_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000001808 78.0
CMS3_k127_807427_0 histidine kinase, dimerisation and phosphoacceptor region K07777 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004933 288.0
CMS3_k127_807427_1 helix_turn_helix, Lux Regulon - - - 0.000000000002437 67.0
CMS3_k127_808932_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 469.0
CMS3_k127_815138_0 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 1.329e-227 713.0
CMS3_k127_815138_1 PFAM Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 409.0
CMS3_k127_815138_2 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000005975 235.0
CMS3_k127_815138_3 nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.000000000000000000000004226 109.0
CMS3_k127_815138_4 Molybdopterin oxidoreductase Fe4S4 domain K00370 - 1.7.5.1 0.00000000000000006362 79.0
CMS3_k127_823359_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 523.0
CMS3_k127_823359_1 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000004829 243.0
CMS3_k127_824524_0 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 352.0
CMS3_k127_824524_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004696 280.0
CMS3_k127_833135_0 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 294.0
CMS3_k127_833135_1 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000001223 190.0
CMS3_k127_84012_0 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000001056 134.0
CMS3_k127_84012_1 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000003312 121.0
CMS3_k127_850356_0 DHH family K07462 - - 0.00000000000000000000000000000000000006281 154.0
CMS3_k127_855439_0 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 361.0
CMS3_k127_867776_0 peptidase M4 thermolysin K01400 - 3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 312.0
CMS3_k127_867776_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000006983 226.0
CMS3_k127_876866_0 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000005504 206.0
CMS3_k127_876866_1 Electron transfer flavoprotein domain - - - 0.00000000000000000000000000000000000000000000000000002275 199.0
CMS3_k127_876866_2 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K03855 - - 0.0000000000000000000000000212 113.0
CMS3_k127_881004_0 Molydopterin dinucleotide binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 411.0
CMS3_k127_885875_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000002695 207.0
CMS3_k127_885875_1 PFAM IS1 transposase K07480 - - 0.0000009868 53.0
CMS3_k127_885875_2 PFAM Glycosyl transferase family 2 - - - 0.0000009868 53.0
CMS3_k127_889849_0 pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000000000000000005045 181.0
CMS3_k127_889849_1 PFAM ABC transporter K16786,K16787 - - 0.00000000000000000000000000000000000000004675 156.0
CMS3_k127_889849_2 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16787 - - 0.00000000000000001139 87.0
CMS3_k127_897254_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 454.0
CMS3_k127_897254_1 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000006787 77.0
CMS3_k127_898932_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 379.0
CMS3_k127_898932_1 cheY-homologous receiver domain - - - 0.0000000000000000000174 93.0
CMS3_k127_905406_0 Psort location Cytoplasmic, score 8.87 - - - 0.000000000000000002294 97.0
CMS3_k127_92975_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000002256 235.0
CMS3_k127_92975_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000002535 234.0
CMS3_k127_92975_2 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000005039 109.0
CMS3_k127_92975_3 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.00000000000000000000004937 101.0
CMS3_k127_934148_0 EamA-like transporter family - - - 0.000000000205 67.0
CMS3_k127_934148_1 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519,K13479 - 1.17.1.4,1.2.5.3 0.00005736 46.0
CMS3_k127_937324_0 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.000000000002674 72.0
CMS3_k127_937324_1 PFAM Protein kinase domain K08884 - 2.7.11.1 0.0000002904 60.0
CMS3_k127_938016_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 358.0
CMS3_k127_94531_0 Polysaccharide biosynthesis protein K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 302.0
CMS3_k127_94531_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313 277.0
CMS3_k127_94531_2 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000004184 223.0
CMS3_k127_94531_3 PFAM Mechanosensitive ion channel - - - 0.0000000008633 68.0
CMS3_k127_94531_4 TIR domain - - - 0.00001158 55.0
CMS3_k127_948114_0 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000000002 81.0
CMS3_k127_953396_0 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 394.0
CMS3_k127_953396_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000001616 134.0
CMS3_k127_954699_0 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000002332 222.0
CMS3_k127_954699_1 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000000000000000007255 136.0
CMS3_k127_954699_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000003202 77.0
CMS3_k127_960161_0 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000538 233.0
CMS3_k127_960161_1 PFAM ABC transporter related K02028,K10041,K17076 - 3.6.3.21 0.000000000000000000000000000000000000000001143 160.0
CMS3_k127_961211_0 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 309.0
CMS3_k127_961211_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001832 256.0
CMS3_k127_961211_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000001595 234.0
CMS3_k127_961211_3 EamA-like transporter family - - - 0.0000000000000000003487 96.0
CMS3_k127_961211_4 protein histidine kinase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000002347 93.0
CMS3_k127_962752_0 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000003486 217.0
CMS3_k127_962752_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000005883 189.0
CMS3_k127_963068_0 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000003924 168.0
CMS3_k127_963068_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000001344 110.0
CMS3_k127_963068_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000001661 61.0
CMS3_k127_974714_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003356 280.0
CMS3_k127_974714_1 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000006038 175.0
CMS3_k127_974714_2 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000000000000000000000000000006433 140.0
CMS3_k127_974714_3 protein kinase activity - - - 0.000001025 55.0
CMS3_k127_976193_0 LysE type translocator - - - 0.000000000000006163 78.0
CMS3_k127_993657_0 NUBPL iron-transfer P-loop NTPase K03496 - - 0.000000000000000000001277 105.0
CMS3_k127_994835_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000002412 267.0
CMS3_k127_994835_1 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000217 166.0
CMS3_k127_994835_2 YARHG - - - 0.00000000000000004053 96.0
CMS3_k127_994835_3 Two component regulator propeller - - - 0.00006564 55.0
CMS3_k127_999698_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 288.0
CMS3_k127_999698_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000755 233.0
CMS3_k127_999698_2 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.0000004411 55.0