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Overview

ID MAG00525
Name CMS3_bin.3
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Cytophagales
Family Cyclobacteriaceae
Genus UBA2336
Species
Assembly information
Completeness (%) 94.0
Contamination (%) 8.68
GC content (%) 45.0
N50 (bp) 30,037
Genome size (bp) 4,310,352

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3610

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1025142_0 Tricorn protease homolog K08676 - - 0.0 1589.0
CMS3_k127_1025142_1 Amidohydrolase family - - - 0.0 1570.0
CMS3_k127_1025142_10 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 556.0
CMS3_k127_1025142_11 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 473.0
CMS3_k127_1025142_12 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 409.0
CMS3_k127_1025142_13 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 407.0
CMS3_k127_1025142_14 S1 P1 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 398.0
CMS3_k127_1025142_15 integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 375.0
CMS3_k127_1025142_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 357.0
CMS3_k127_1025142_17 Phospholipase/Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 325.0
CMS3_k127_1025142_18 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 303.0
CMS3_k127_1025142_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 294.0
CMS3_k127_1025142_2 Sortilin, neurotensin receptor 3, - - - 0.0 1241.0
CMS3_k127_1025142_20 Participates in the control of copper homeostasis K06201 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 288.0
CMS3_k127_1025142_21 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.000000000000000000000000000000000000000000000000000000000000000000008905 237.0
CMS3_k127_1025142_22 Acyl carrier protein phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000007599 229.0
CMS3_k127_1025142_23 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000001778 203.0
CMS3_k127_1025142_24 - - - - 0.0000000000000000000000000000000000000000000000000000001705 196.0
CMS3_k127_1025142_25 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000001245 196.0
CMS3_k127_1025142_26 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000006778 190.0
CMS3_k127_1025142_27 Cell wall-associated hydrolase (invasion-associated protein) K13695 - - 0.0000000000000000000000000000000000000000000000000000576 191.0
CMS3_k127_1025142_28 - - - - 0.0000000000000000000000000000000000000000000000000001114 188.0
CMS3_k127_1025142_29 Domain of unknown function (DUF4198) - - - 0.00000000000000000000000000000000000000000000000001046 190.0
CMS3_k127_1025142_3 Prolyl oligopeptidase family - - - 1.161e-282 889.0
CMS3_k127_1025142_30 Domain of unknown function (DUF4260) - - - 0.000000000000000000000000000000000000000009653 156.0
CMS3_k127_1025142_31 ankyrin repeats - - - 0.0000000000000000000000000000000000000006794 154.0
CMS3_k127_1025142_32 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000001736 119.0
CMS3_k127_1025142_35 Protein of unknown function (DUF3088) - - - 0.00000000000000000000000585 106.0
CMS3_k127_1025142_36 - - - - 0.000000000000000000004234 99.0
CMS3_k127_1025142_37 Tellurite resistance protein TerB - - - 0.0000000000000000005673 92.0
CMS3_k127_1025142_38 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000001088 70.0
CMS3_k127_1025142_39 CarboxypepD_reg-like domain - - - 0.00000000004285 74.0
CMS3_k127_1025142_4 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 5.205e-281 880.0
CMS3_k127_1025142_40 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.0000000001016 70.0
CMS3_k127_1025142_5 Asparagine synthase K01953 - 6.3.5.4 9.958e-274 856.0
CMS3_k127_1025142_6 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 1.428e-224 704.0
CMS3_k127_1025142_7 Belongs to the peptidase M24B family K01262 - 3.4.11.9 5.676e-199 628.0
CMS3_k127_1025142_8 Amidohydrolase family - - - 9.143e-194 613.0
CMS3_k127_1025142_9 Two component regulator three Y domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 615.0
CMS3_k127_1033989_0 OmpA family - - - 6.304e-234 742.0
CMS3_k127_1033989_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 524.0
CMS3_k127_1033989_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 351.0
CMS3_k127_1033989_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
CMS3_k127_1033989_4 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002008 269.0
CMS3_k127_1033989_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000009693 248.0
CMS3_k127_1033989_6 PFAM phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000001013 231.0
CMS3_k127_1033989_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001533 223.0
CMS3_k127_1033989_8 - - - - 0.000000000000000000000000000000000000000000000006811 175.0
CMS3_k127_105111_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 1.364e-249 773.0
CMS3_k127_105111_1 Cystathionine beta-lyase K01758,K01760 - 4.4.1.1,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 538.0
CMS3_k127_105111_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 431.0
CMS3_k127_1052230_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 357.0
CMS3_k127_1052230_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002222 244.0
CMS3_k127_1052230_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000555 168.0
CMS3_k127_1053605_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.85e-272 845.0
CMS3_k127_1053605_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 603.0
CMS3_k127_1053605_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 595.0
CMS3_k127_1053605_3 acetolactate synthase large subunit K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 457.0
CMS3_k127_1053605_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 395.0
CMS3_k127_1053605_5 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000000000000000003514 172.0
CMS3_k127_1077374_0 BNR Asp-box repeat - - - 0.0 1424.0
CMS3_k127_1077374_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.0 1212.0
CMS3_k127_1077374_10 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000004632 257.0
CMS3_k127_1077374_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000011 235.0
CMS3_k127_1077374_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000002344 226.0
CMS3_k127_1077374_13 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000001777 163.0
CMS3_k127_1077374_15 gluconolactonase activity K07214 - - 0.000000000000000000000000000000004899 140.0
CMS3_k127_1077374_16 - - - - 0.00000000000000000000000001546 115.0
CMS3_k127_1077374_17 - - - - 0.000000000000007534 83.0
CMS3_k127_1077374_18 - - - - 0.000000000009499 67.0
CMS3_k127_1077374_19 - - - - 0.0000003934 57.0
CMS3_k127_1077374_2 Dienelactone hydrolase family - - - 8.917e-318 984.0
CMS3_k127_1077374_3 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 535.0
CMS3_k127_1077374_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 498.0
CMS3_k127_1077374_5 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 473.0
CMS3_k127_1077374_6 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 388.0
CMS3_k127_1077374_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 383.0
CMS3_k127_1077374_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 342.0
CMS3_k127_1077374_9 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003914 274.0
CMS3_k127_1082573_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 5.221e-198 623.0
CMS3_k127_1082573_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 609.0
CMS3_k127_1082573_2 Required for chromosome condensation and partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000009987 244.0
CMS3_k127_1082573_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000004817 227.0
CMS3_k127_1082573_4 Chaperonin 10 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000006542 214.0
CMS3_k127_1082573_5 - - - - 0.00000000000000000000000000000001936 132.0
CMS3_k127_1082573_6 - - - - 0.000000000000004601 78.0
CMS3_k127_1082573_7 Rhomboid family - - - 0.00000000000004952 75.0
CMS3_k127_1087322_0 Peptidase dimerisation domain K12941 - - 5.993e-233 731.0
CMS3_k127_1087322_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 616.0
CMS3_k127_1087322_2 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 586.0
CMS3_k127_1087322_3 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 478.0
CMS3_k127_1087322_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 421.0
CMS3_k127_1087322_5 Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 399.0
CMS3_k127_1087322_6 PFAM fumarylacetoacetate (FAA) hydrolase K14259 - 4.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 315.0
CMS3_k127_1087322_7 TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004789 259.0
CMS3_k127_109081_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1392.0
CMS3_k127_109081_1 TonB-dependent Receptor Plug - - - 2.469e-303 958.0
CMS3_k127_109081_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 331.0
CMS3_k127_109081_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 309.0
CMS3_k127_109081_12 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
CMS3_k127_109081_13 Protein of unknown function (Porph_ging) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 241.0
CMS3_k127_109081_14 Transcriptional regulator, TetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000001607 230.0
CMS3_k127_109081_15 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000003347 201.0
CMS3_k127_109081_16 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000000000000000000000000000000000000000001797 194.0
CMS3_k127_109081_17 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000000000000002094 169.0
CMS3_k127_109081_18 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000007361 160.0
CMS3_k127_109081_19 transcriptional regulator - - - 0.000000000000000000000000000000000000000008732 158.0
CMS3_k127_109081_2 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 3.263e-256 810.0
CMS3_k127_109081_20 - - - - 0.000000000000000000000000000000000000002783 151.0
CMS3_k127_109081_21 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000004576 129.0
CMS3_k127_109081_22 TfoX N-terminal domain - - - 0.0000000000000000000000000103 114.0
CMS3_k127_109081_23 COG NOG27406 non supervised orthologous group - - - 0.0000000000000000002817 95.0
CMS3_k127_109081_24 - - - - 0.0000000004807 61.0
CMS3_k127_109081_25 COG NOG26965 non supervised orthologous group - - - 0.0000000005077 68.0
CMS3_k127_109081_26 - - - - 0.0001134 46.0
CMS3_k127_109081_3 Glycosyl hydrolases family 15 K01178 - 3.2.1.3 5.23e-250 783.0
CMS3_k127_109081_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 471.0
CMS3_k127_109081_5 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 425.0
CMS3_k127_109081_6 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 413.0
CMS3_k127_109081_7 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 396.0
CMS3_k127_109081_8 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 341.0
CMS3_k127_109081_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 329.0
CMS3_k127_1097129_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.034e-204 640.0
CMS3_k127_1097129_1 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 316.0
CMS3_k127_1097129_2 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000003039 190.0
CMS3_k127_1097129_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000001356 134.0
CMS3_k127_1116871_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1315.0
CMS3_k127_1116871_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1191.0
CMS3_k127_1116871_10 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 614.0
CMS3_k127_1116871_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 564.0
CMS3_k127_1116871_12 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 520.0
CMS3_k127_1116871_13 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 517.0
CMS3_k127_1116871_14 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 513.0
CMS3_k127_1116871_15 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 483.0
CMS3_k127_1116871_16 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 466.0
CMS3_k127_1116871_17 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 428.0
CMS3_k127_1116871_18 PFAM Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 402.0
CMS3_k127_1116871_19 Belongs to the 'phage' integrase family K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 372.0
CMS3_k127_1116871_2 Domain of unknown function (DUF5117) - - - 0.0 1075.0
CMS3_k127_1116871_20 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 325.0
CMS3_k127_1116871_21 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 304.0
CMS3_k127_1116871_22 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006867 273.0
CMS3_k127_1116871_23 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000002223 254.0
CMS3_k127_1116871_24 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007168 244.0
CMS3_k127_1116871_25 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000004865 226.0
CMS3_k127_1116871_26 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000002287 203.0
CMS3_k127_1116871_27 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000003266 203.0
CMS3_k127_1116871_28 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000001279 207.0
CMS3_k127_1116871_29 - - - - 0.0000000000000000000000000000000000000000000000000000005548 201.0
CMS3_k127_1116871_3 PFAM Zinc carboxypeptidase - - - 0.0 1015.0
CMS3_k127_1116871_30 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000006376 196.0
CMS3_k127_1116871_31 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000000000001244 203.0
CMS3_k127_1116871_32 Fibrillarin - - - 0.000000000000000000000000000000000000000000000003736 180.0
CMS3_k127_1116871_33 redox protein regulator of disulfide bond formation K04063 - - 0.00000000000000000000000000000000000000000000001841 174.0
CMS3_k127_1116871_34 LemA family K03744 - - 0.0000000000000000000000000000000000000000005169 164.0
CMS3_k127_1116871_35 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000000000008785 153.0
CMS3_k127_1116871_36 RDD family - - - 0.0000000000000000000000000000000000000002076 154.0
CMS3_k127_1116871_37 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000003388 138.0
CMS3_k127_1116871_39 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000008069 138.0
CMS3_k127_1116871_4 Leukotriene A4 hydrolase, C-terminal - - - 3.049e-241 760.0
CMS3_k127_1116871_40 DinB family - - - 0.0000000000000000000000000000004271 129.0
CMS3_k127_1116871_41 Protein of unknown function (DUF3592) - - - 0.0000000000000000000000000003268 121.0
CMS3_k127_1116871_42 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000002524 108.0
CMS3_k127_1116871_43 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000005079 96.0
CMS3_k127_1116871_44 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000007381 94.0
CMS3_k127_1116871_46 periplasmic or secreted lipoprotein - - - 0.000000000009657 66.0
CMS3_k127_1116871_47 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000002132 65.0
CMS3_k127_1116871_48 - - - - 0.0006272 49.0
CMS3_k127_1116871_5 Participates in both transcription termination and antitermination K02600 - - 4.081e-220 688.0
CMS3_k127_1116871_6 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.148e-214 672.0
CMS3_k127_1116871_7 acyl-CoA dehydrogenase - - - 3.718e-205 643.0
CMS3_k127_1116871_8 PFAM AIR synthase related protein K01933 - 6.3.3.1 4.648e-200 628.0
CMS3_k127_1116871_9 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 595.0
CMS3_k127_1175158_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 422.0
CMS3_k127_1175158_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 417.0
CMS3_k127_1175158_2 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 302.0
CMS3_k127_1175158_3 Transport permease protein K01992 - - 0.00000000000000000000000000003296 132.0
CMS3_k127_1175158_4 Type II secretory pathway component ExeA - - - 0.000000000000007377 89.0
CMS3_k127_1175158_5 - - - - 0.0000000478 61.0
CMS3_k127_1194327_0 ribonuclease, Rne Rng family K08301 - - 1.315e-209 662.0
CMS3_k127_1194327_1 pathogenesis K07004,K18195,K20276 - 4.2.2.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 469.0
CMS3_k127_1194327_2 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 360.0
CMS3_k127_1194327_3 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001172 270.0
CMS3_k127_1194327_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004021 254.0
CMS3_k127_1194327_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002656 249.0
CMS3_k127_1194327_6 Protease prsW family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002009 236.0
CMS3_k127_1194327_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000008929 213.0
CMS3_k127_1194327_8 Thioredoxin - - - 0.000000000000000000000000000000000000000001112 162.0
CMS3_k127_1194327_9 - - - - 0.00001349 47.0
CMS3_k127_1218470_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 557.0
CMS3_k127_1218470_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000004034 204.0
CMS3_k127_1218470_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000001696 140.0
CMS3_k127_1228766_0 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 468.0
CMS3_k127_1228766_1 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 403.0
CMS3_k127_1228766_2 DHHA1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 294.0
CMS3_k127_1234745_0 Belongs to the glycosyl hydrolase 13 family - - - 1.279e-258 820.0
CMS3_k127_1234745_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K21572 - - 2.53e-199 633.0
CMS3_k127_1234745_2 Outer membrane protein SusF_SusE K21571 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 367.0
CMS3_k127_1234745_3 TonB dependent receptor K21573 - - 0.00000000000000000000000000000004247 128.0
CMS3_k127_1253428_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.00000000000000000000000000000000000009549 154.0
CMS3_k127_1253428_1 Domain of unknown function (DUF4129) - - - 0.00000000000000000000000000000001082 136.0
CMS3_k127_1253428_2 - - - - 0.0000000000000005848 82.0
CMS3_k127_1272517_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1110.0
CMS3_k127_1272517_1 conserved repeat domain protein - - - 0.0 1086.0
CMS3_k127_1272517_10 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 2.263e-218 690.0
CMS3_k127_1272517_11 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 598.0
CMS3_k127_1272517_12 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 581.0
CMS3_k127_1272517_13 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 581.0
CMS3_k127_1272517_14 PFAM Nucleoside recognition K06373 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 563.0
CMS3_k127_1272517_15 PFAM Sodium alanine symporter family K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 539.0
CMS3_k127_1272517_16 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 526.0
CMS3_k127_1272517_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 496.0
CMS3_k127_1272517_18 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 488.0
CMS3_k127_1272517_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 427.0
CMS3_k127_1272517_2 Belongs to the complex I 30 kDa subunit family K13378 - 1.6.5.3 8.093e-319 982.0
CMS3_k127_1272517_20 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 416.0
CMS3_k127_1272517_21 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 369.0
CMS3_k127_1272517_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 355.0
CMS3_k127_1272517_24 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 344.0
CMS3_k127_1272517_25 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 352.0
CMS3_k127_1272517_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 315.0
CMS3_k127_1272517_27 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 338.0
CMS3_k127_1272517_28 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 309.0
CMS3_k127_1272517_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002562 277.0
CMS3_k127_1272517_3 ATP synthesis coupled electron transport K00336 - 1.6.5.3 6.894e-313 981.0
CMS3_k127_1272517_30 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000002077 263.0
CMS3_k127_1272517_31 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001526 263.0
CMS3_k127_1272517_32 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000007175 255.0
CMS3_k127_1272517_33 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000000000000000000000000000000000001578 232.0
CMS3_k127_1272517_34 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000168 212.0
CMS3_k127_1272517_35 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000001371 208.0
CMS3_k127_1272517_36 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000002528 196.0
CMS3_k127_1272517_37 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000171 188.0
CMS3_k127_1272517_38 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000003034 151.0
CMS3_k127_1272517_39 Thioredoxin-like - - - 0.00000000000000000000000000000000000006013 149.0
CMS3_k127_1272517_4 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 1.393e-258 807.0
CMS3_k127_1272517_40 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000003552 143.0
CMS3_k127_1272517_41 arsenate reductase (glutaredoxin) activity K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.000000000000000000000000000000007095 132.0
CMS3_k127_1272517_42 Acyl CoA binding protein - - - 0.0000000000000000000000000001194 117.0
CMS3_k127_1272517_43 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000000000004656 113.0
CMS3_k127_1272517_44 cheY-homologous receiver domain - - - 0.00000000000000000000006114 102.0
CMS3_k127_1272517_45 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000002704 76.0
CMS3_k127_1272517_46 C-terminal domain of CHU protein family - - - 0.0000000000003261 85.0
CMS3_k127_1272517_5 COGs COG1523 Type II secretory pathway pullulanase PulA and related glycosidase K01200 - 3.2.1.41 4.454e-235 745.0
CMS3_k127_1272517_6 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 3.857e-233 736.0
CMS3_k127_1272517_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.041e-227 709.0
CMS3_k127_1272517_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.069e-221 692.0
CMS3_k127_1272517_9 Nicotinate-nucleotide adenylyltransferase - - - 1.039e-220 693.0
CMS3_k127_1281290_0 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 388.0
CMS3_k127_1281290_1 cytochrome - - - 0.00000000000000000000006743 100.0
CMS3_k127_1281290_2 Protein of Unknown function (DUF2784) - - - 0.000002443 50.0
CMS3_k127_128217_0 peptidase S9B dipeptidylpeptidase IV domain protein - - - 0.0 1094.0
CMS3_k127_128217_1 Protein related to penicillin acylase K01434 - 3.5.1.11 1.196e-310 970.0
CMS3_k127_128217_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000021 267.0
CMS3_k127_128217_11 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000004441 142.0
CMS3_k127_128217_12 Protein of unknown function (DUF3667) K01091 - 3.1.3.18 0.000000000000000000001483 104.0
CMS3_k127_128217_13 Tetratricopeptide repeat - - - 0.000000000000000000005589 99.0
CMS3_k127_128217_14 - - - - 0.000000002441 58.0
CMS3_k127_128217_15 - - - - 0.00000002255 59.0
CMS3_k127_128217_16 - - - - 0.0007723 51.0
CMS3_k127_128217_2 lysine biosynthetic process via aminoadipic acid - - - 7.988e-260 821.0
CMS3_k127_128217_3 PFAM TonB-dependent Receptor Plug K02014,K16089 - - 1.851e-252 799.0
CMS3_k127_128217_4 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 3.935e-240 749.0
CMS3_k127_128217_5 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 2.831e-232 728.0
CMS3_k127_128217_6 FtsX-like permease family - - - 7.714e-195 634.0
CMS3_k127_128217_7 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 458.0
CMS3_k127_128217_8 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 334.0
CMS3_k127_128217_9 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 301.0
CMS3_k127_13361_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1313.0
CMS3_k127_13361_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.431e-267 832.0
CMS3_k127_13361_10 mandelate racemase muconate lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 421.0
CMS3_k127_13361_11 Amino acid permease K03294,K03758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 407.0
CMS3_k127_13361_12 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 395.0
CMS3_k127_13361_13 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 398.0
CMS3_k127_13361_14 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 359.0
CMS3_k127_13361_15 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 351.0
CMS3_k127_13361_16 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000122 285.0
CMS3_k127_13361_17 endonuclease III K01247,K13529 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 288.0
CMS3_k127_13361_18 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001082 284.0
CMS3_k127_13361_19 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000102 264.0
CMS3_k127_13361_2 Acetolactate synthase, large subunit K01652 - 2.2.1.6 4.242e-247 775.0
CMS3_k127_13361_20 PFAM Rhomboid family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000002229 214.0
CMS3_k127_13361_21 PFAM Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000003748 207.0
CMS3_k127_13361_22 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000001469 174.0
CMS3_k127_13361_23 Transcriptional repressor, CopY family - - - 0.0000000000000000000000000000000001018 137.0
CMS3_k127_13361_24 Tetratricopeptide repeat - - - 0.0000000000000000000000002152 114.0
CMS3_k127_13361_25 Metal binding domain of Ada - - - 0.000000000000000000004157 95.0
CMS3_k127_13361_26 - - - - 0.0000000000000000005903 91.0
CMS3_k127_13361_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.354e-246 768.0
CMS3_k127_13361_4 PFAM glycogen synthase K00693 - 2.4.1.11 5.061e-233 736.0
CMS3_k127_13361_5 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.952e-231 730.0
CMS3_k127_13361_6 Acetohydroxy acid isomeroreductase, catalytic domain K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 567.0
CMS3_k127_13361_7 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 551.0
CMS3_k127_13361_8 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 548.0
CMS3_k127_13361_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009 541.0
CMS3_k127_1340779_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.979e-238 745.0
CMS3_k127_1343412_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 533.0
CMS3_k127_1343412_1 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000042 282.0
CMS3_k127_139964_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 2.815e-316 983.0
CMS3_k127_139964_1 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 308.0
CMS3_k127_139964_2 Starch-binding associating with outer membrane K21572 - - 0.0000682 47.0
CMS3_k127_1426238_0 KR domain K00038 - 1.1.1.53 0.0000000000000000000000000000000000000000000000000002501 194.0
CMS3_k127_1426238_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000001807 153.0
CMS3_k127_1426238_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000003677 55.0
CMS3_k127_1426238_3 - - - - 0.0005378 48.0
CMS3_k127_14277_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 4.909e-214 674.0
CMS3_k127_14277_1 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
CMS3_k127_1447737_0 ribonuclease, Rne Rng family K08301 - - 7.898e-211 667.0
CMS3_k127_1447737_1 Nitronate monooxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 452.0
CMS3_k127_1447737_10 Thioredoxin - - - 0.00000000000000000000000000000000000000000004971 165.0
CMS3_k127_1447737_11 Belongs to the bacterial histone-like protein family K03530 - - 0.0000000000000000000000000000000000000000000637 162.0
CMS3_k127_1447737_13 - - - - 0.00003364 46.0
CMS3_k127_1447737_2 pathogenesis K07004,K18195,K20276 - 4.2.2.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 473.0
CMS3_k127_1447737_3 Domain of unknown function (DUF4153) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 372.0
CMS3_k127_1447737_4 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001558 258.0
CMS3_k127_1447737_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001573 255.0
CMS3_k127_1447737_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001415 250.0
CMS3_k127_1447737_7 Protease prsW family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001623 239.0
CMS3_k127_1447737_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000643 237.0
CMS3_k127_1447737_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000001844 184.0
CMS3_k127_1463401_0 Insulinase (Peptidase family M16) K07263 - - 2.33e-304 958.0
CMS3_k127_1463401_1 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 2.228e-213 683.0
CMS3_k127_1463401_2 CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 538.0
CMS3_k127_1463401_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 332.0
CMS3_k127_1463401_4 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 326.0
CMS3_k127_1463401_5 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000000000000000002196 156.0
CMS3_k127_1463401_6 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000001177 124.0
CMS3_k127_1463401_7 Protein of unknown function (DUF493) - - - 0.0000000000000000000000006394 106.0
CMS3_k127_1463401_8 Tetratricopeptide repeat protein - - - 0.0000000000001519 71.0
CMS3_k127_1467606_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 3.399e-230 724.0
CMS3_k127_1467606_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 1.535e-212 667.0
CMS3_k127_1467606_10 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001407 277.0
CMS3_k127_1467606_11 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004316 252.0
CMS3_k127_1467606_12 metallopeptidase activity K01387 - 3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000005954 219.0
CMS3_k127_1467606_13 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000006042 222.0
CMS3_k127_1467606_14 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000001457 208.0
CMS3_k127_1467606_15 OsmC-like protein - - - 0.0000000000000000000000000000000000000001855 154.0
CMS3_k127_1467606_17 PhoQ Sensor - - - 0.00000000009375 73.0
CMS3_k127_1467606_2 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 7.756e-208 656.0
CMS3_k127_1467606_3 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 1.681e-199 636.0
CMS3_k127_1467606_4 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 539.0
CMS3_k127_1467606_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 503.0
CMS3_k127_1467606_6 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 463.0
CMS3_k127_1467606_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 460.0
CMS3_k127_1467606_8 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 441.0
CMS3_k127_1467606_9 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 399.0
CMS3_k127_1523040_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1070.0
CMS3_k127_1523040_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 4.746e-314 975.0
CMS3_k127_1523040_10 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 364.0
CMS3_k127_1523040_11 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 359.0
CMS3_k127_1523040_12 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000496 278.0
CMS3_k127_1523040_13 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000008832 233.0
CMS3_k127_1523040_14 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000004289 183.0
CMS3_k127_1523040_15 - - - - 0.00000000000000000000000000000000002521 140.0
CMS3_k127_1523040_16 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000002264 117.0
CMS3_k127_1523040_17 PFAM leucine-rich repeat protein - - - 0.00000000000000000000000001228 125.0
CMS3_k127_1523040_18 luxR family - - - 0.0000000003557 68.0
CMS3_k127_1523040_2 M61 glycyl aminopeptidase - - - 8.611e-250 786.0
CMS3_k127_1523040_3 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.851e-240 745.0
CMS3_k127_1523040_4 FAD dependent oxidoreductase K07137 - - 4.39e-232 728.0
CMS3_k127_1523040_5 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 3.026e-204 650.0
CMS3_k127_1523040_6 MORN repeat variant - - - 9.436e-198 633.0
CMS3_k127_1523040_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 606.0
CMS3_k127_1523040_8 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 528.0
CMS3_k127_1523040_9 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 423.0
CMS3_k127_153547_0 ABC transporter K06158 - - 3.45e-274 856.0
CMS3_k127_153547_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 568.0
CMS3_k127_153547_10 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000003802 216.0
CMS3_k127_153547_11 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000001883 206.0
CMS3_k127_153547_12 domain protein - - - 0.00000000000000000000000000000000000000000000000000000001371 214.0
CMS3_k127_153547_13 Protein of unknown function (DUF3276) - - - 0.000000000000000000000000000000000000000000000005594 174.0
CMS3_k127_153547_14 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000234 167.0
CMS3_k127_153547_15 - - - - 0.00000000000000000000000000000001306 132.0
CMS3_k127_153547_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 535.0
CMS3_k127_153547_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 416.0
CMS3_k127_153547_4 Domain of unknown function (DUF5103) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 382.0
CMS3_k127_153547_5 PFAM Acyl-CoA reductase (LuxC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 365.0
CMS3_k127_153547_6 PFAM CRISPR associated protein Cas6 K19091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 335.0
CMS3_k127_153547_7 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 289.0
CMS3_k127_153547_8 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 266.0
CMS3_k127_153547_9 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000002949 218.0
CMS3_k127_1571117_0 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 6.292e-247 767.0
CMS3_k127_1571117_1 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 439.0
CMS3_k127_1571117_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 338.0
CMS3_k127_1571117_3 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008879 255.0
CMS3_k127_1571117_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000003309 74.0
CMS3_k127_1625615_0 CarboxypepD_reg-like domain - - - 0.0 1247.0
CMS3_k127_1625615_1 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 581.0
CMS3_k127_1625615_11 TIR domain - - - 0.0000004067 63.0
CMS3_k127_1625615_2 ATPase associated with various cellular activities, AAA_5 K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 503.0
CMS3_k127_1625615_3 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 306.0
CMS3_k127_1625615_4 Phospholipid methyltransferase K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003872 283.0
CMS3_k127_1625615_5 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000005914 166.0
CMS3_k127_1625615_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000001047 153.0
CMS3_k127_1625615_7 ThiF family - - - 0.000000000000000000000000000000000007155 147.0
CMS3_k127_1625615_8 Bacterial-like globin K06886 - - 0.0000000000000000000000002129 109.0
CMS3_k127_1625615_9 Domain of unknown function (DUF4395) - - - 0.00000000489 63.0
CMS3_k127_16432_0 PFAM Bacterial membrane protein YfhO - - - 6.171e-311 974.0
CMS3_k127_16432_1 PFAM PspC domain K03973 - - 8.426e-223 715.0
CMS3_k127_16432_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001708 262.0
CMS3_k127_16432_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002256 251.0
CMS3_k127_16432_4 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000001558 145.0
CMS3_k127_16432_5 - - - - 0.00000000000000000000000000006527 122.0
CMS3_k127_186008_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000204 225.0
CMS3_k127_186008_1 - - - - 0.0000000000000000000000000000000006283 134.0
CMS3_k127_186008_2 response to abiotic stimulus - - - 0.0000000000000000000001032 108.0
CMS3_k127_1891052_0 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 1.237e-302 933.0
CMS3_k127_1891052_1 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 375.0
CMS3_k127_1891052_2 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 235.0
CMS3_k127_1891052_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001734 229.0
CMS3_k127_1891052_4 arsR family K03892 - - 0.000000000000000000000000000000000000000000000000003042 184.0
CMS3_k127_1891052_5 transcriptional regulator - - - 0.000000000000000000000000000000000006774 141.0
CMS3_k127_1958598_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1675.0
CMS3_k127_1958598_1 - - - - 0.0 1508.0
CMS3_k127_1958598_10 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1013.0
CMS3_k127_1958598_100 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000002135 153.0
CMS3_k127_1958598_101 Domain of unknown function (DUF4286) - - - 0.0000000000000000000000000000000000001066 143.0
CMS3_k127_1958598_102 Pkd domain containing protein - - - 0.00000000000000000000000000000000001143 158.0
CMS3_k127_1958598_103 Late embryogenesis abundant protein - - - 0.00000000000000000000000000000000002817 140.0
CMS3_k127_1958598_104 NnrU protein - - - 0.0000000000000000000000000000005845 128.0
CMS3_k127_1958598_105 DinB family - - - 0.000000000000000000000000000001095 126.0
CMS3_k127_1958598_106 - - - - 0.00000000000000000000000000000199 126.0
CMS3_k127_1958598_107 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000003099 123.0
CMS3_k127_1958598_108 YtxH-like protein - - - 0.000000000000000000000000000004649 122.0
CMS3_k127_1958598_109 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000001643 120.0
CMS3_k127_1958598_11 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0 999.0
CMS3_k127_1958598_111 - - - - 0.0000000000000000000002626 103.0
CMS3_k127_1958598_113 - - - - 0.000000000000000009738 89.0
CMS3_k127_1958598_114 - - - - 0.0000000000000000282 84.0
CMS3_k127_1958598_115 - - - - 0.0000000000000004667 81.0
CMS3_k127_1958598_116 Domain of unknown function (DUF4293) - - - 0.000000000000001101 82.0
CMS3_k127_1958598_117 phosphorelay signal transduction system K13587 - 2.7.13.3 0.000000000004958 71.0
CMS3_k127_1958598_118 Outer membrane protein beta-barrel domain - - - 0.00000002866 59.0
CMS3_k127_1958598_12 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.5e-323 1002.0
CMS3_k127_1958598_120 - - - - 0.0002688 47.0
CMS3_k127_1958598_13 Molecular chaperone. Has ATPase activity K04079 - - 1.122e-320 991.0
CMS3_k127_1958598_14 aminopeptidase - - - 3.327e-318 990.0
CMS3_k127_1958598_15 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 3.113e-296 924.0
CMS3_k127_1958598_16 ABC transporter transmembrane region K18890 - - 2.693e-290 900.0
CMS3_k127_1958598_17 esterase - - - 2.468e-279 869.0
CMS3_k127_1958598_18 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 4.821e-278 872.0
CMS3_k127_1958598_19 Belongs to the ompA family - - - 4.797e-273 855.0
CMS3_k127_1958598_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1433.0
CMS3_k127_1958598_20 ABC transporter transmembrane region K18889 - - 1.153e-263 823.0
CMS3_k127_1958598_21 Patatin-like phospholipase K07001 - - 2.691e-258 816.0
CMS3_k127_1958598_22 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 8.165e-256 797.0
CMS3_k127_1958598_23 Circularly permuted ATP-grasp type 2 - - - 1.728e-248 773.0
CMS3_k127_1958598_24 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.443e-237 742.0
CMS3_k127_1958598_25 PFAM Peptidase family M20 M25 M40 - - - 8.199e-232 724.0
CMS3_k127_1958598_26 Amidase - - - 7.889e-208 659.0
CMS3_k127_1958598_27 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 5.963e-201 634.0
CMS3_k127_1958598_28 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 601.0
CMS3_k127_1958598_29 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 601.0
CMS3_k127_1958598_3 Carboxypeptidase regulatory-like domain - - - 0.0 1428.0
CMS3_k127_1958598_30 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 587.0
CMS3_k127_1958598_31 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 585.0
CMS3_k127_1958598_32 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 567.0
CMS3_k127_1958598_33 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 559.0
CMS3_k127_1958598_34 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 540.0
CMS3_k127_1958598_35 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 533.0
CMS3_k127_1958598_36 Pfam Alpha-L-fucosidase K01206 - 3.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 540.0
CMS3_k127_1958598_37 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 555.0
CMS3_k127_1958598_38 Belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 526.0
CMS3_k127_1958598_39 Alanine dehydrogenase PNT, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 514.0
CMS3_k127_1958598_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1280.0
CMS3_k127_1958598_40 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 507.0
CMS3_k127_1958598_41 Peptidase m28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 489.0
CMS3_k127_1958598_42 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 435.0
CMS3_k127_1958598_43 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 419.0
CMS3_k127_1958598_44 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 447.0
CMS3_k127_1958598_45 COGs COG1305 Transglutaminase-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 409.0
CMS3_k127_1958598_46 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 411.0
CMS3_k127_1958598_47 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 407.0
CMS3_k127_1958598_48 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 391.0
CMS3_k127_1958598_49 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 384.0
CMS3_k127_1958598_5 AsmA-like C-terminal region - - - 0.0 1115.0
CMS3_k127_1958598_50 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 379.0
CMS3_k127_1958598_51 Gliding motility protein, GldB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 381.0
CMS3_k127_1958598_52 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
CMS3_k127_1958598_53 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 370.0
CMS3_k127_1958598_54 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 354.0
CMS3_k127_1958598_55 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 385.0
CMS3_k127_1958598_56 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 350.0
CMS3_k127_1958598_57 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 347.0
CMS3_k127_1958598_58 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 353.0
CMS3_k127_1958598_59 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 354.0
CMS3_k127_1958598_6 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1103.0
CMS3_k127_1958598_60 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 349.0
CMS3_k127_1958598_61 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 350.0
CMS3_k127_1958598_62 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 345.0
CMS3_k127_1958598_63 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 330.0
CMS3_k127_1958598_64 SBF-like CPA transporter family (DUF4137) K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 331.0
CMS3_k127_1958598_65 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 325.0
CMS3_k127_1958598_66 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 318.0
CMS3_k127_1958598_67 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 304.0
CMS3_k127_1958598_68 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 308.0
CMS3_k127_1958598_69 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 319.0
CMS3_k127_1958598_7 Aminopeptidase N - - - 0.0 1061.0
CMS3_k127_1958598_70 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 305.0
CMS3_k127_1958598_71 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 306.0
CMS3_k127_1958598_72 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 302.0
CMS3_k127_1958598_73 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 301.0
CMS3_k127_1958598_74 Mycoplasma protein of unknown function, DUF285 K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 327.0
CMS3_k127_1958598_75 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 297.0
CMS3_k127_1958598_76 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 287.0
CMS3_k127_1958598_77 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002777 279.0
CMS3_k127_1958598_78 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000924 276.0
CMS3_k127_1958598_79 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003656 258.0
CMS3_k127_1958598_8 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1044.0
CMS3_k127_1958598_80 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003273 256.0
CMS3_k127_1958598_81 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001866 249.0
CMS3_k127_1958598_82 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004985 251.0
CMS3_k127_1958598_83 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000002408 229.0
CMS3_k127_1958598_84 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000000009344 217.0
CMS3_k127_1958598_86 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001866 212.0
CMS3_k127_1958598_87 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K03828 - - 0.0000000000000000000000000000000000000000000000000000000003766 205.0
CMS3_k127_1958598_88 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000001202 202.0
CMS3_k127_1958598_89 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000003501 198.0
CMS3_k127_1958598_9 Aminopeptidase N - - - 0.0 1020.0
CMS3_k127_1958598_90 - - - - 0.000000000000000000000000000000000000000000000000002256 190.0
CMS3_k127_1958598_91 Carbonic anhydrase K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000003754 189.0
CMS3_k127_1958598_92 - - - - 0.0000000000000000000000000000000000000000000000001917 183.0
CMS3_k127_1958598_93 - - - - 0.000000000000000000000000000000000000000000000001467 176.0
CMS3_k127_1958598_94 DinB superfamily - - - 0.000000000000000000000000000000000000000000000002306 180.0
CMS3_k127_1958598_95 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000002581 175.0
CMS3_k127_1958598_96 YbbR-like protein - - - 0.00000000000000000000000000000000000000000000002998 181.0
CMS3_k127_1958598_97 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000000000005517 174.0
CMS3_k127_1958598_99 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000002064 169.0
CMS3_k127_1958889_0 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 391.0
CMS3_k127_1958889_1 Belongs to the MIP aquaporin (TC 1.A.8) family K09873 GO:0000325,GO:0003674,GO:0005215,GO:0005372,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006833,GO:0008150,GO:0009705,GO:0015204,GO:0015250,GO:0015267,GO:0015318,GO:0015840,GO:0016020,GO:0016021,GO:0019755,GO:0022803,GO:0022838,GO:0022857,GO:0031090,GO:0031224,GO:0031226,GO:0034220,GO:0042044,GO:0042807,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071918,GO:0071944,GO:0098588,GO:0098805 - 0.000000000000000000000000000003137 128.0
CMS3_k127_1989844_0 Alpha-2-Macroglobulin K06894 - - 0.0 2093.0
CMS3_k127_1989844_1 penicillin-binding protein 1C K05367 - 2.4.1.129 2.049e-285 897.0
CMS3_k127_1989844_2 Cystathionine beta-synthase K01697 - 4.2.1.22 1.815e-239 746.0
CMS3_k127_1989844_3 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 538.0
CMS3_k127_1989844_4 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001957 284.0
CMS3_k127_1989844_5 response regulator, receiver K01768,K03415,K07777,K18967 - 2.7.13.3,2.7.7.65,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000004091 233.0
CMS3_k127_1989844_6 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000001479 177.0
CMS3_k127_1989844_7 SnoaL-like domain - - - 0.000000000000121 76.0
CMS3_k127_202334_0 PFAM Elongation factor Tu domain 2 K06207 - - 1.778e-294 913.0
CMS3_k127_202334_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 356.0
CMS3_k127_202334_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 339.0
CMS3_k127_202334_3 SpoU rRNA Methylase family K03437 - - 0.000000000000000004181 87.0
CMS3_k127_2027715_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1576.0
CMS3_k127_2027715_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 1.001e-225 707.0
CMS3_k127_2027715_10 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000003698 77.0
CMS3_k127_2027715_11 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00003364 46.0
CMS3_k127_2027715_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 399.0
CMS3_k127_2027715_3 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 389.0
CMS3_k127_2027715_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 348.0
CMS3_k127_2027715_5 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 303.0
CMS3_k127_2027715_6 proteinase inhibitor I4 serpin K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 293.0
CMS3_k127_2027715_7 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000006892 226.0
CMS3_k127_2027715_8 - - - - 0.000000000000000000000000000000000000000000003107 166.0
CMS3_k127_2032803_0 Penicillin binding protein transpeptidase K05366 - 2.4.1.129,3.4.16.4 0.0 1079.0
CMS3_k127_2032803_1 Tetratricopeptide repeats - - - 6.562e-264 838.0
CMS3_k127_2032803_10 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000001716 58.0
CMS3_k127_2032803_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 6.732e-216 685.0
CMS3_k127_2032803_3 TIGRFAM Gliding motility-associated protein GldM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 427.0
CMS3_k127_2032803_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 343.0
CMS3_k127_2032803_5 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 315.0
CMS3_k127_2032803_6 TIGRFAM gliding motility associated protien GldN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005223 267.0
CMS3_k127_2032803_7 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000262 210.0
CMS3_k127_2032803_8 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000000000954 192.0
CMS3_k127_2032803_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000002845 92.0
CMS3_k127_2063791_0 TIGRFAM capsular exopolysaccharide family - - - 1.922e-218 703.0
CMS3_k127_2063791_1 PFAM Tetratricopeptide repeat - - - 1.221e-210 664.0
CMS3_k127_2063791_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 478.0
CMS3_k127_2063791_3 Glycosyl transferase 4-like K13004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 475.0
CMS3_k127_2063791_4 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 322.0
CMS3_k127_2063791_5 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000162 257.0
CMS3_k127_2063791_6 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000001117 229.0
CMS3_k127_2063791_7 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000003667 224.0
CMS3_k127_2063791_8 PFAM Excinuclease ABC, C subunit K07461 - - 0.000000000000000000001678 96.0
CMS3_k127_2063791_9 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000003388 51.0
CMS3_k127_2079372_0 DNA polymerase Ligase (LigD) - - - 1.879e-311 971.0
CMS3_k127_2079372_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.946e-307 951.0
CMS3_k127_2079372_10 ABC-type multidrug transport system ATPase and permease K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004262 292.0
CMS3_k127_2079372_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006518 265.0
CMS3_k127_2079372_12 COGs COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008277 258.0
CMS3_k127_2079372_13 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008897 254.0
CMS3_k127_2079372_14 Acyl dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002735 240.0
CMS3_k127_2079372_15 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000004786 229.0
CMS3_k127_2079372_16 PFAM Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000008411 213.0
CMS3_k127_2079372_17 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000000003245 199.0
CMS3_k127_2079372_18 - - - - 0.00000000000000000000000000000000000000000000000001592 184.0
CMS3_k127_2079372_19 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000002536 179.0
CMS3_k127_2079372_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 3.61e-283 895.0
CMS3_k127_2079372_20 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000008536 179.0
CMS3_k127_2079372_21 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000764 156.0
CMS3_k127_2079372_22 Domain of unknown function (DUF4184) - - - 0.0000000000000000000000000000000000000006599 158.0
CMS3_k127_2079372_23 Sulfurtransferase - - - 0.000000000000000000000000000000000000007225 147.0
CMS3_k127_2079372_24 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000001102 151.0
CMS3_k127_2079372_25 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000004954 134.0
CMS3_k127_2079372_26 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000005816 114.0
CMS3_k127_2079372_27 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000002456 124.0
CMS3_k127_2079372_28 Rhodanese-like protein - - - 0.0000000000000000001457 90.0
CMS3_k127_2079372_29 Transposase - - - 0.00000000000000003644 83.0
CMS3_k127_2079372_3 ABC transporter K15738 - - 5.132e-219 695.0
CMS3_k127_2079372_30 Protein of unknown function (DUF2892) - - - 0.000000000000007397 77.0
CMS3_k127_2079372_31 Methyltransferase domain - - - 0.00003744 48.0
CMS3_k127_2079372_4 PFAM Metallo-beta-lactamase superfamily - - - 1.088e-198 628.0
CMS3_k127_2079372_5 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 469.0
CMS3_k127_2079372_6 Peptidase inhibitor I9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 448.0
CMS3_k127_2079372_7 galactokinase activity K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 387.0
CMS3_k127_2079372_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 372.0
CMS3_k127_2079372_9 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000198 278.0
CMS3_k127_2112360_0 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 462.0
CMS3_k127_2112360_1 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 337.0
CMS3_k127_2112360_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000003587 115.0
CMS3_k127_2112360_3 Lipoate-protein ligase K03800 - 6.3.1.20 0.000009705 49.0
CMS3_k127_2117899_0 cellulose binding - - - 2.051e-253 798.0
CMS3_k127_2117899_1 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001915 260.0
CMS3_k127_2117899_2 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000001214 92.0
CMS3_k127_2142700_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1267.0
CMS3_k127_2142700_1 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1170.0
CMS3_k127_2142700_10 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 509.0
CMS3_k127_2142700_11 PDZ domain (Also known as DHR or GLGF) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 509.0
CMS3_k127_2142700_12 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 505.0
CMS3_k127_2142700_13 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 488.0
CMS3_k127_2142700_14 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 488.0
CMS3_k127_2142700_15 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 488.0
CMS3_k127_2142700_16 PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 466.0
CMS3_k127_2142700_17 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 437.0
CMS3_k127_2142700_18 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 413.0
CMS3_k127_2142700_19 COGs COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 397.0
CMS3_k127_2142700_2 acyl-CoA dehydrogenase - - - 2.327e-311 961.0
CMS3_k127_2142700_20 COGs COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 379.0
CMS3_k127_2142700_21 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 384.0
CMS3_k127_2142700_22 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 365.0
CMS3_k127_2142700_23 PFAM type I phosphodiesterase nucleotide pyrophosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 364.0
CMS3_k127_2142700_24 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 319.0
CMS3_k127_2142700_25 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 309.0
CMS3_k127_2142700_26 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003813 280.0
CMS3_k127_2142700_27 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005708 280.0
CMS3_k127_2142700_28 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001569 269.0
CMS3_k127_2142700_29 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008755 256.0
CMS3_k127_2142700_3 FtsX-like permease family - - - 3.229e-275 868.0
CMS3_k127_2142700_30 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002595 254.0
CMS3_k127_2142700_31 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001125 239.0
CMS3_k127_2142700_32 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000151 231.0
CMS3_k127_2142700_33 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000001652 200.0
CMS3_k127_2142700_34 Transcriptional regulator, MarR family - - - 0.0000000000000000000000000000000000000000000000000000008365 195.0
CMS3_k127_2142700_35 2',5' RNA ligase - - - 0.00000000000000000000000000000000000000000000000000321 188.0
CMS3_k127_2142700_36 - - - - 0.0000000000000000000000000000000000000000000000001109 190.0
CMS3_k127_2142700_37 - - - - 0.00000000000000000000000000000000000000000000006147 179.0
CMS3_k127_2142700_38 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000009507 173.0
CMS3_k127_2142700_39 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000004877 156.0
CMS3_k127_2142700_4 FtsX-like permease family - - - 4.623e-255 809.0
CMS3_k127_2142700_40 DinB family - - - 0.000000000000000000000000000000000000007685 150.0
CMS3_k127_2142700_41 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000001439 145.0
CMS3_k127_2142700_43 Rieske [2Fe-2S] domain K05710 - - 0.00000000000000000000002845 102.0
CMS3_k127_2142700_44 23S rRNA-intervening sequence protein - - - 0.0000000000000000008274 89.0
CMS3_k127_2142700_45 - - - - 0.00000000000000004335 82.0
CMS3_k127_2142700_46 Domain of unknown function (DU1801) - - - 0.00000000000000006401 85.0
CMS3_k127_2142700_47 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000009066 80.0
CMS3_k127_2142700_49 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.000001227 59.0
CMS3_k127_2142700_5 MacB-like periplasmic core domain K02004 - - 2.639e-242 772.0
CMS3_k127_2142700_50 Domain of unknown function (DUF4440) - - - 0.000154 50.0
CMS3_k127_2142700_6 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 601.0
CMS3_k127_2142700_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 595.0
CMS3_k127_2142700_8 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 557.0
CMS3_k127_2142700_9 TIGRFAM gliding motility-associated protein GldE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 550.0
CMS3_k127_2145138_0 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0 1068.0
CMS3_k127_2145138_1 alpha-glucuronidase activity K01235 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010410,GO:0010413,GO:0016052,GO:0016787,GO:0016798,GO:0033939,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044260,GO:0045491,GO:0045493,GO:0071554,GO:0071704,GO:1901575,GO:2000886 3.2.1.139 3.298e-319 991.0
CMS3_k127_2145138_10 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 355.0
CMS3_k127_2145138_11 PFAM Short-chain dehydrogenase reductase SDR K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 333.0
CMS3_k127_2145138_12 Dehydrogenase K13877 - 1.2.1.26 0.00000000000000000001543 94.0
CMS3_k127_2145138_2 Fibronectin type III-like domain K05349 - 3.2.1.21 1.542e-311 971.0
CMS3_k127_2145138_3 Belongs to the IlvD Edd family - - - 3.64e-311 959.0
CMS3_k127_2145138_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.312e-232 729.0
CMS3_k127_2145138_5 Glucuronate isomerase K01812 - 5.3.1.12 4.586e-220 691.0
CMS3_k127_2145138_6 Pyridoxal-dependent decarboxylase conserved domain - - - 4.116e-207 654.0
CMS3_k127_2145138_7 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 607.0
CMS3_k127_2145138_8 GntP family permease K03299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 500.0
CMS3_k127_2145138_9 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 420.0
CMS3_k127_2157511_0 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 338.0
CMS3_k127_2157511_1 nucleic acid-binding protein contains PIN domain K07062 - - 0.000000000000000000000000000000000000000000001916 168.0
CMS3_k127_2157511_2 PFAM transposase IS4 family protein - - - 0.0000000000000000000000000000000000000000009632 168.0
CMS3_k127_2157511_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000003095 84.0
CMS3_k127_236629_0 - - - - 0.00000000000000000000000000000000000000000000000000000007294 199.0
CMS3_k127_236629_1 epimerase - - - 0.0000000000000000000000000000000000000000000008827 169.0
CMS3_k127_236629_2 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000002566 125.0
CMS3_k127_236629_3 Protein of unknown function (DUF1232) - - - 0.000000000000000000000001482 109.0
CMS3_k127_2399394_0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 324.0
CMS3_k127_2399394_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000001593 211.0
CMS3_k127_2435955_0 CHAT domain - - - 0.0 1423.0
CMS3_k127_2435955_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1101.0
CMS3_k127_2435955_10 COG1228 Imidazolonepropionase and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008296 451.0
CMS3_k127_2435955_11 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 427.0
CMS3_k127_2435955_12 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 445.0
CMS3_k127_2435955_13 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 419.0
CMS3_k127_2435955_14 deoxyhypusine monooxygenase activity K01256,K01387 - 3.4.11.2,3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 400.0
CMS3_k127_2435955_15 PFAM FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 387.0
CMS3_k127_2435955_16 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 372.0
CMS3_k127_2435955_17 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 370.0
CMS3_k127_2435955_18 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 357.0
CMS3_k127_2435955_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 329.0
CMS3_k127_2435955_2 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 8.013e-271 844.0
CMS3_k127_2435955_20 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 323.0
CMS3_k127_2435955_21 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 319.0
CMS3_k127_2435955_22 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 314.0
CMS3_k127_2435955_23 PFAM histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 317.0
CMS3_k127_2435955_24 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002769 286.0
CMS3_k127_2435955_25 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002351 278.0
CMS3_k127_2435955_26 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004444 256.0
CMS3_k127_2435955_27 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000006095 239.0
CMS3_k127_2435955_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000005354 229.0
CMS3_k127_2435955_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001706 222.0
CMS3_k127_2435955_3 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 6.676e-254 787.0
CMS3_k127_2435955_30 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000009824 213.0
CMS3_k127_2435955_31 Methylmalonyl-CoA mutase N-terminal domain subunit K01847 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000002847 220.0
CMS3_k127_2435955_32 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000001981 207.0
CMS3_k127_2435955_33 membrane protein (DUF2154) - - - 0.000000000000000000000000000000000000000000000000000002535 200.0
CMS3_k127_2435955_34 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000000000000000000000000000005268 187.0
CMS3_k127_2435955_35 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000000000000000000000006465 171.0
CMS3_k127_2435955_36 PFAM translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000000000000003436 164.0
CMS3_k127_2435955_37 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000607 160.0
CMS3_k127_2435955_38 PFAM YceI-like domain - - - 0.000000000000000000000000000000000000000009269 162.0
CMS3_k127_2435955_39 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000001322 153.0
CMS3_k127_2435955_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.547e-223 695.0
CMS3_k127_2435955_40 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000001083 134.0
CMS3_k127_2435955_41 - - - - 0.00000000000000000000000000000125 128.0
CMS3_k127_2435955_42 Pfam YceI-like domain - - - 0.00000000000000000000000003766 115.0
CMS3_k127_2435955_44 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000007157 93.0
CMS3_k127_2435955_45 Domain of unknown function (DUF4288) - - - 0.0000000000000008213 82.0
CMS3_k127_2435955_46 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000001687 67.0
CMS3_k127_2435955_47 cell adhesion K12686 - - 0.000000006148 63.0
CMS3_k127_2435955_48 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000001333 56.0
CMS3_k127_2435955_5 PFAM amidohydrolase - - - 2.803e-210 661.0
CMS3_k127_2435955_6 PFAM Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 592.0
CMS3_k127_2435955_7 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 574.0
CMS3_k127_2435955_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 522.0
CMS3_k127_2435955_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 499.0
CMS3_k127_2446708_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 3.517e-312 962.0
CMS3_k127_2446708_1 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 3.443e-306 943.0
CMS3_k127_2446708_10 chorismate mutase K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 555.0
CMS3_k127_2446708_11 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 549.0
CMS3_k127_2446708_12 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 494.0
CMS3_k127_2446708_13 PFAM Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 482.0
CMS3_k127_2446708_14 chorismate mutase K04516 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 471.0
CMS3_k127_2446708_15 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 454.0
CMS3_k127_2446708_16 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 420.0
CMS3_k127_2446708_17 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 414.0
CMS3_k127_2446708_18 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 404.0
CMS3_k127_2446708_19 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 367.0
CMS3_k127_2446708_2 Organic solvent tolerance protein OstA - - - 1.163e-303 956.0
CMS3_k127_2446708_20 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 347.0
CMS3_k127_2446708_21 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 327.0
CMS3_k127_2446708_22 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 325.0
CMS3_k127_2446708_23 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 312.0
CMS3_k127_2446708_24 Belongs to the ComB family K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 299.0
CMS3_k127_2446708_25 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 301.0
CMS3_k127_2446708_26 Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003811 283.0
CMS3_k127_2446708_27 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001642 256.0
CMS3_k127_2446708_28 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001417 254.0
CMS3_k127_2446708_29 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000387 226.0
CMS3_k127_2446708_3 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 2.04e-294 908.0
CMS3_k127_2446708_30 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000001203 228.0
CMS3_k127_2446708_31 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000385 220.0
CMS3_k127_2446708_32 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000008006 219.0
CMS3_k127_2446708_33 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000000000000000000000000003944 209.0
CMS3_k127_2446708_34 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000004282 209.0
CMS3_k127_2446708_35 Macrocin-O-methyltransferase (TylF) - - - 0.0000000000000000000000000000000000000000000000000000000001346 211.0
CMS3_k127_2446708_36 TIGRFAM DivIVA domain K04074 - - 0.0000000000000000000000000000000000000000000000000000000001414 213.0
CMS3_k127_2446708_37 - - - - 0.0000000000000000000000000000000000000000000000000000000003429 206.0
CMS3_k127_2446708_38 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000000000000000000000003068 195.0
CMS3_k127_2446708_39 - - - - 0.0000000000000000000000000000000000000000000000000001182 190.0
CMS3_k127_2446708_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.564e-228 710.0
CMS3_k127_2446708_40 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000000000001282 178.0
CMS3_k127_2446708_41 Belongs to the P-Pant transferase superfamily - - - 0.0000000000000000000000000000000000000000000008395 173.0
CMS3_k127_2446708_42 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000002417 168.0
CMS3_k127_2446708_43 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000259 143.0
CMS3_k127_2446708_44 Septum formation initiator - - - 0.0000000000000000000000000000001285 125.0
CMS3_k127_2446708_45 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000009562 121.0
CMS3_k127_2446708_46 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000004851 113.0
CMS3_k127_2446708_47 - - - - 0.000000000000009765 80.0
CMS3_k127_2446708_48 long-chain fatty acid transport protein - - - 0.0000000000005658 76.0
CMS3_k127_2446708_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 590.0
CMS3_k127_2446708_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 584.0
CMS3_k127_2446708_7 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 573.0
CMS3_k127_2446708_8 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 572.0
CMS3_k127_2446708_9 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 571.0
CMS3_k127_2459840_0 intracellular signal transduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 445.0
CMS3_k127_2531646_0 Sortilin, neurotensin receptor 3, - - - 0.0 1426.0
CMS3_k127_2531646_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 6.991e-240 745.0
CMS3_k127_2531646_10 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 505.0
CMS3_k127_2531646_11 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 494.0
CMS3_k127_2531646_12 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 472.0
CMS3_k127_2531646_13 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 467.0
CMS3_k127_2531646_14 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 454.0
CMS3_k127_2531646_15 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 434.0
CMS3_k127_2531646_16 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 383.0
CMS3_k127_2531646_17 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 329.0
CMS3_k127_2531646_18 Acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 311.0
CMS3_k127_2531646_19 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000003384 257.0
CMS3_k127_2531646_2 C-terminal domain of CHU protein family - - - 1.315e-206 704.0
CMS3_k127_2531646_20 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000001312 211.0
CMS3_k127_2531646_21 pfam nudix - - - 0.00000000000000000000000000000000000000006506 158.0
CMS3_k127_2531646_22 - - - - 0.00000000000000000000000000000000018 135.0
CMS3_k127_2531646_23 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000000000001159 122.0
CMS3_k127_2531646_24 - - - - 0.0000000000000000000007972 98.0
CMS3_k127_2531646_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.264e-205 645.0
CMS3_k127_2531646_4 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 5.534e-201 634.0
CMS3_k127_2531646_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 567.0
CMS3_k127_2531646_6 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 548.0
CMS3_k127_2531646_7 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 544.0
CMS3_k127_2531646_8 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 507.0
CMS3_k127_2531646_9 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 498.0
CMS3_k127_258470_0 PFAM Family of - - - 0.0 1334.0
CMS3_k127_258470_1 DEAD DEAH box helicase K03724 - - 0.0 1163.0
CMS3_k127_258470_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 509.0
CMS3_k127_258470_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 496.0
CMS3_k127_258470_12 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 496.0
CMS3_k127_258470_13 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 434.0
CMS3_k127_258470_14 PFAM Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 388.0
CMS3_k127_258470_15 PFAM Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 339.0
CMS3_k127_258470_16 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 322.0
CMS3_k127_258470_17 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 298.0
CMS3_k127_258470_18 PFAM MerR family regulatory protein K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 298.0
CMS3_k127_258470_19 lycopene cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001245 263.0
CMS3_k127_258470_2 FtsX-like permease family - - - 0.0 1107.0
CMS3_k127_258470_20 PFAM Fatty acid hydroxylase K15746 - 1.14.15.24 0.0000000000000000000000000000000000000000000000000000000000000000000000006913 248.0
CMS3_k127_258470_21 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000001151 228.0
CMS3_k127_258470_22 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000001133 218.0
CMS3_k127_258470_23 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000001241 219.0
CMS3_k127_258470_24 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000003795 212.0
CMS3_k127_258470_25 SRPBCC domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000003735 199.0
CMS3_k127_258470_26 Thioesterase - - - 0.000000000000000000000000000000000000000003916 158.0
CMS3_k127_258470_27 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000008415 156.0
CMS3_k127_258470_28 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000002607 138.0
CMS3_k127_258470_29 - - - - 0.0000000000000000000000000005205 117.0
CMS3_k127_258470_3 FtsX-like permease family - - - 7.514e-263 831.0
CMS3_k127_258470_30 - - - - 0.00000000000000000000000008004 118.0
CMS3_k127_258470_31 - - - - 0.00001516 49.0
CMS3_k127_258470_32 Glyoxalase-like domain K01759 - 4.4.1.5 0.0005002 48.0
CMS3_k127_258470_4 MacB-like periplasmic core domain - - - 7.826e-254 805.0
CMS3_k127_258470_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 8.923e-237 740.0
CMS3_k127_258470_6 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 1.519e-215 679.0
CMS3_k127_258470_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 586.0
CMS3_k127_258470_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 577.0
CMS3_k127_258470_9 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 578.0
CMS3_k127_2587819_0 WD40 repeats - - - 0.0 1257.0
CMS3_k127_2587819_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 541.0
CMS3_k127_2587819_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000001305 125.0
CMS3_k127_2587819_3 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000001647 66.0
CMS3_k127_2600389_0 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 510.0
CMS3_k127_2600389_1 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009647 428.0
CMS3_k127_2600389_10 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000003782 224.0
CMS3_k127_2600389_11 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000004491 173.0
CMS3_k127_2600389_12 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000002147 132.0
CMS3_k127_2600389_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 434.0
CMS3_k127_2600389_3 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 411.0
CMS3_k127_2600389_4 Na+/H+ antiporter family K03315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 380.0
CMS3_k127_2600389_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 357.0
CMS3_k127_2600389_6 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 293.0
CMS3_k127_2600389_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002832 271.0
CMS3_k127_2600389_8 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001157 259.0
CMS3_k127_2600389_9 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000000005602 229.0
CMS3_k127_2606366_0 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 459.0
CMS3_k127_2606366_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 457.0
CMS3_k127_2606366_2 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 456.0
CMS3_k127_2606366_3 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 437.0
CMS3_k127_2606366_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 412.0
CMS3_k127_2606366_5 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 324.0
CMS3_k127_2606366_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003677 231.0
CMS3_k127_2606366_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000008345 205.0
CMS3_k127_2606366_8 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.00000000000000000000000000000002442 132.0
CMS3_k127_2606366_9 chaperone-mediated protein folding - - - 0.00000004207 64.0
CMS3_k127_277613_0 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 385.0
CMS3_k127_277613_1 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000006495 208.0
CMS3_k127_277613_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000001035 106.0
CMS3_k127_2882461_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.046e-250 791.0
CMS3_k127_2882461_1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 558.0
CMS3_k127_2882461_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 533.0
CMS3_k127_2882461_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000109 251.0
CMS3_k127_2882461_4 FeoA K04758 - - 0.000000001039 59.0
CMS3_k127_2884827_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 553.0
CMS3_k127_2884827_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 375.0
CMS3_k127_2884827_2 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 358.0
CMS3_k127_2884827_3 N-acetylglucosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 336.0
CMS3_k127_2884827_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 308.0
CMS3_k127_2884827_5 RDD family - - - 0.00000000000000000000000000000000000000000000000000000000000002035 222.0
CMS3_k127_2884827_6 PFAM SprT-like family - - - 0.0000000000000000000000000000000000000000000000000006773 190.0
CMS3_k127_2884827_7 Cytochrome b5-like Heme/Steroid binding domain - - - 0.000000000000000000000000000000000003407 138.0
CMS3_k127_2886747_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 1.674e-212 670.0
CMS3_k127_2886747_1 Pyridoxal-dependent decarboxylase conserved domain - - - 1.136e-200 635.0
CMS3_k127_2886747_10 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001596 284.0
CMS3_k127_2886747_11 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002121 281.0
CMS3_k127_2886747_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000002921 218.0
CMS3_k127_2886747_13 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000001081 203.0
CMS3_k127_2886747_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759,K03827 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000553 190.0
CMS3_k127_2886747_15 helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000000000000000000000000000001223 190.0
CMS3_k127_2886747_16 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000001621 191.0
CMS3_k127_2886747_17 UPF0114 protein - - - 0.00000000000000000000000000000000000000000000928 168.0
CMS3_k127_2886747_18 Aspartyl protease - - - 0.000000000000000000000000000000000008776 149.0
CMS3_k127_2886747_19 Domain of unknown function (DUF4345) - - - 0.00000000000000000000000000000009136 132.0
CMS3_k127_2886747_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 596.0
CMS3_k127_2886747_20 Aspartyl protease - - - 0.00000000000000008123 91.0
CMS3_k127_2886747_21 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000001865 59.0
CMS3_k127_2886747_22 Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b K07199 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0007049,GO:0007050,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022607,GO:0023052,GO:0030011,GO:0031588,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0035088,GO:0035090,GO:0035878,GO:0036211,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0048518,GO:0048519,GO:0048523,GO:0048736,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051259,GO:0051291,GO:0051716,GO:0051726,GO:0060173,GO:0060249,GO:0060255,GO:0061245,GO:0061695,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1902494,GO:1902911,GO:1990234 - 0.0000000385 66.0
CMS3_k127_2886747_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 554.0
CMS3_k127_2886747_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 423.0
CMS3_k127_2886747_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 426.0
CMS3_k127_2886747_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 425.0
CMS3_k127_2886747_7 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 408.0
CMS3_k127_2886747_8 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 339.0
CMS3_k127_2886747_9 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 336.0
CMS3_k127_2890532_0 ABC-2 type transporter - - - 0.0 1309.0
CMS3_k127_2890532_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 9.005e-245 773.0
CMS3_k127_2890532_10 Sulfate permease K03321 - - 0.000000000000000000000000000000000000000003133 171.0
CMS3_k127_2890532_12 Pentapeptide repeats (9 copies) - - - 0.00000000006224 63.0
CMS3_k127_2890532_13 Thioredoxin-like - - - 0.0000000003152 63.0
CMS3_k127_2890532_14 - - - - 0.000000003096 59.0
CMS3_k127_2890532_16 copper resistance K07233,K07798,K14588 - - 0.000001394 57.0
CMS3_k127_2890532_17 Autotransporter beta-domain - - - 0.0001409 46.0
CMS3_k127_2890532_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 4.59e-204 642.0
CMS3_k127_2890532_3 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 574.0
CMS3_k127_2890532_4 PFAM Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 435.0
CMS3_k127_2890532_5 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 338.0
CMS3_k127_2890532_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 316.0
CMS3_k127_2890532_7 PFAM Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005586 236.0
CMS3_k127_2890532_8 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000002738 205.0
CMS3_k127_2890532_9 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000001279 186.0
CMS3_k127_2918294_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1113.0
CMS3_k127_2918294_1 PKD domain - - - 0.0 1060.0
CMS3_k127_2918294_10 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.926e-195 626.0
CMS3_k127_2918294_11 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 602.0
CMS3_k127_2918294_12 Anthranilate synthase component I, N terminal region K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 557.0
CMS3_k127_2918294_13 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 529.0
CMS3_k127_2918294_14 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 540.0
CMS3_k127_2918294_15 PFAM DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 517.0
CMS3_k127_2918294_16 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 490.0
CMS3_k127_2918294_17 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 466.0
CMS3_k127_2918294_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 469.0
CMS3_k127_2918294_19 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 452.0
CMS3_k127_2918294_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.67e-322 1006.0
CMS3_k127_2918294_20 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 442.0
CMS3_k127_2918294_21 PFAM coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 435.0
CMS3_k127_2918294_22 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 390.0
CMS3_k127_2918294_23 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 387.0
CMS3_k127_2918294_24 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 385.0
CMS3_k127_2918294_25 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 376.0
CMS3_k127_2918294_26 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 392.0
CMS3_k127_2918294_27 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008581 366.0
CMS3_k127_2918294_28 PFAM ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 360.0
CMS3_k127_2918294_29 nuclear chromosome segregation K09892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 363.0
CMS3_k127_2918294_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.316e-297 918.0
CMS3_k127_2918294_30 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 347.0
CMS3_k127_2918294_31 PFAM GSCFA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 331.0
CMS3_k127_2918294_32 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 322.0
CMS3_k127_2918294_33 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 317.0
CMS3_k127_2918294_34 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 300.0
CMS3_k127_2918294_35 Domain of unknown function (DUF1287) K09974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004493 280.0
CMS3_k127_2918294_36 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000006211 261.0
CMS3_k127_2918294_37 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000002011 265.0
CMS3_k127_2918294_38 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000009875 249.0
CMS3_k127_2918294_39 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000007342 234.0
CMS3_k127_2918294_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 5.223e-244 770.0
CMS3_k127_2918294_40 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000000009737 218.0
CMS3_k127_2918294_41 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000002907 217.0
CMS3_k127_2918294_42 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000002765 213.0
CMS3_k127_2918294_43 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000001896 207.0
CMS3_k127_2918294_44 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000007544 189.0
CMS3_k127_2918294_45 - - - - 0.0000000000000000000000000000000000000000000000000004843 189.0
CMS3_k127_2918294_46 - - - - 0.00000000000000000000000000000000000000000000000006866 184.0
CMS3_k127_2918294_47 - - - - 0.0000000000000000000000000000000000000000000001107 172.0
CMS3_k127_2918294_48 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000005435 143.0
CMS3_k127_2918294_49 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000003396 143.0
CMS3_k127_2918294_5 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 1.032e-237 752.0
CMS3_k127_2918294_50 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000008776 132.0
CMS3_k127_2918294_52 NifU domain protein - - - 0.0000000000000000000000000008627 117.0
CMS3_k127_2918294_53 - - - - 0.000000000000000000005958 94.0
CMS3_k127_2918294_6 Outer membrane protein protective antigen OMA87 - - - 2.657e-234 751.0
CMS3_k127_2918294_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 9.814e-224 697.0
CMS3_k127_2918294_8 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 2.023e-214 674.0
CMS3_k127_2918294_9 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 3.372e-209 655.0
CMS3_k127_2925521_0 PFAM Glutamine amidotransferase, class-II K00764 - 2.4.2.14 9.14e-322 992.0
CMS3_k127_2925521_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 486.0
CMS3_k127_2925521_10 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000000001529 211.0
CMS3_k127_2925521_11 EVE domain - - - 0.0000000000000000000000000000000000000000000008253 172.0
CMS3_k127_2925521_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000005052 117.0
CMS3_k127_2925521_13 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000006869 104.0
CMS3_k127_2925521_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 465.0
CMS3_k127_2925521_3 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 430.0
CMS3_k127_2925521_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 394.0
CMS3_k127_2925521_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 387.0
CMS3_k127_2925521_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 366.0
CMS3_k127_2925521_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 372.0
CMS3_k127_2925521_8 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001637 272.0
CMS3_k127_2925521_9 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002348 263.0
CMS3_k127_2969629_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 466.0
CMS3_k127_2969629_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002923 278.0
CMS3_k127_2969629_2 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002614 240.0
CMS3_k127_2971679_0 FtsX-like permease family - - - 8.533e-303 947.0
CMS3_k127_2971679_1 Transport of potassium into the cell K03549 - - 3.69e-231 732.0
CMS3_k127_2971679_10 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 355.0
CMS3_k127_2971679_11 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 351.0
CMS3_k127_2971679_12 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 326.0
CMS3_k127_2971679_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002142 282.0
CMS3_k127_2971679_14 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001444 266.0
CMS3_k127_2971679_15 B-1 B cell differentiation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000271 254.0
CMS3_k127_2971679_16 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002529 241.0
CMS3_k127_2971679_18 Domain of unknown function (DUF4386) - - - 0.000000000000000000000000000000000000002034 155.0
CMS3_k127_2971679_2 ABC transporter substrate-binding component GldG K01992 - - 1.3e-198 634.0
CMS3_k127_2971679_21 - - - - 0.000000000000000000000000000000000027 147.0
CMS3_k127_2971679_22 - - - - 0.00000000000000000009619 95.0
CMS3_k127_2971679_23 - - - - 0.0000000000000007342 85.0
CMS3_k127_2971679_24 - - - - 0.0002762 46.0
CMS3_k127_2971679_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 608.0
CMS3_k127_2971679_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 629.0
CMS3_k127_2971679_5 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 612.0
CMS3_k127_2971679_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 526.0
CMS3_k127_2971679_7 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 486.0
CMS3_k127_2971679_8 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 385.0
CMS3_k127_2971679_9 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 354.0
CMS3_k127_301494_0 extracellular polysaccharide biosynthetic process K16692 GO:0000271,GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016020,GO:0016021,GO:0016051,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0031224,GO:0031226,GO:0033692,GO:0034637,GO:0034645,GO:0036211,GO:0038083,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046377,GO:0046777,GO:0071704,GO:0071944,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 - 7.574e-243 774.0
CMS3_k127_301494_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 550.0
CMS3_k127_301494_10 Polysaccharide lyase - - - 0.00000000000000000000000000000000000000000000000000000000403 209.0
CMS3_k127_301494_11 Polysaccharide lyase - - - 0.00000000000000000000000000000000000000000000000000001806 197.0
CMS3_k127_301494_12 Polysaccharide lyase - - - 0.000000000000000000000000000000000000000000000001268 183.0
CMS3_k127_301494_13 polysaccharide deacetylase - - - 0.0000000000000000000000000000003722 135.0
CMS3_k127_301494_14 ATP binding - - - 0.00000000000000000000000000001213 132.0
CMS3_k127_301494_15 Sodium/calcium exchanger protein K07301 - - 0.0000000003963 63.0
CMS3_k127_301494_2 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 493.0
CMS3_k127_301494_3 sugar transferase K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 419.0
CMS3_k127_301494_4 PFAM Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 402.0
CMS3_k127_301494_5 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 376.0
CMS3_k127_301494_7 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 336.0
CMS3_k127_301494_8 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 308.0
CMS3_k127_301494_9 ATP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008217 287.0
CMS3_k127_302517_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1286.0
CMS3_k127_302517_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1148.0
CMS3_k127_302517_10 signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 612.0
CMS3_k127_302517_11 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917 571.0
CMS3_k127_302517_12 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 559.0
CMS3_k127_302517_13 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 559.0
CMS3_k127_302517_14 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 562.0
CMS3_k127_302517_15 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 526.0
CMS3_k127_302517_16 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 527.0
CMS3_k127_302517_17 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 479.0
CMS3_k127_302517_18 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 441.0
CMS3_k127_302517_19 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 440.0
CMS3_k127_302517_2 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 1.982e-267 830.0
CMS3_k127_302517_20 PFAM Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 423.0
CMS3_k127_302517_21 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 423.0
CMS3_k127_302517_22 pyridine nucleotide-disulphide oxidoreductase K17218 GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0042802,GO:0044237,GO:0045333,GO:0055114 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 421.0
CMS3_k127_302517_23 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 428.0
CMS3_k127_302517_24 NOL1 NOP2 sun family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 419.0
CMS3_k127_302517_25 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 374.0
CMS3_k127_302517_26 Putative serine dehydratase domain K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 377.0
CMS3_k127_302517_27 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 364.0
CMS3_k127_302517_28 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 352.0
CMS3_k127_302517_29 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 321.0
CMS3_k127_302517_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.744e-256 794.0
CMS3_k127_302517_30 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 304.0
CMS3_k127_302517_31 Domain of unknown function (DUF4290) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000156 244.0
CMS3_k127_302517_32 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000001522 238.0
CMS3_k127_302517_33 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000111 238.0
CMS3_k127_302517_34 HIT family hydrolase K02503 - - 0.000000000000000000000000000000000000000000000000000000004596 201.0
CMS3_k127_302517_35 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000002911 195.0
CMS3_k127_302517_36 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000004973 185.0
CMS3_k127_302517_37 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000000000000000000001569 172.0
CMS3_k127_302517_38 Thiol-disulfide oxidoreductase - - - 0.0000000000000000000000000000000000000000000229 164.0
CMS3_k127_302517_39 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000000000000000000000001323 163.0
CMS3_k127_302517_4 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 1.244e-233 735.0
CMS3_k127_302517_40 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000001258 158.0
CMS3_k127_302517_41 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000206 144.0
CMS3_k127_302517_42 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000001051 118.0
CMS3_k127_302517_43 PFAM PspC domain - - - 0.000000000000000000000000000393 115.0
CMS3_k127_302517_44 - - - - 0.000000000000000000000613 97.0
CMS3_k127_302517_45 regulation of translation K03733,K05808,K05809 - - 0.0000000000000000001643 92.0
CMS3_k127_302517_5 C-terminal domain of CHU protein family - - - 4.942e-232 751.0
CMS3_k127_302517_6 Tetratricopeptide repeat protein - - - 3.828e-221 700.0
CMS3_k127_302517_7 Histidine ammonia-lyase K01745 - 4.3.1.3 1.841e-220 693.0
CMS3_k127_302517_8 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.691e-217 681.0
CMS3_k127_302517_9 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 7.572e-209 654.0
CMS3_k127_3040631_0 Sortilin, neurotensin receptor 3, - - - 0.0 1627.0
CMS3_k127_3040631_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1296.0
CMS3_k127_3040631_10 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 531.0
CMS3_k127_3040631_11 Cystathionine beta-lyase K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 525.0
CMS3_k127_3040631_12 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 525.0
CMS3_k127_3040631_13 CinA-like protein K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 522.0
CMS3_k127_3040631_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 499.0
CMS3_k127_3040631_15 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 499.0
CMS3_k127_3040631_16 Short-chain dehydrogenase reductase SDR K13774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 486.0
CMS3_k127_3040631_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 478.0
CMS3_k127_3040631_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 474.0
CMS3_k127_3040631_19 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 458.0
CMS3_k127_3040631_2 belongs to the aldehyde dehydrogenase family - - - 7.679e-300 925.0
CMS3_k127_3040631_20 PFAM Aminotransferase class I and II K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 421.0
CMS3_k127_3040631_21 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 404.0
CMS3_k127_3040631_22 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 411.0
CMS3_k127_3040631_23 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 378.0
CMS3_k127_3040631_24 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 342.0
CMS3_k127_3040631_25 peptidase K13049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 350.0
CMS3_k127_3040631_26 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005082 282.0
CMS3_k127_3040631_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003083 274.0
CMS3_k127_3040631_28 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001128 267.0
CMS3_k127_3040631_29 Transcriptional regulator K20968 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0006355,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019219,GO:0019222,GO:0019243,GO:0019249,GO:0019752,GO:0031323,GO:0031326,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051596,GO:0060255,GO:0061727,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002047 262.0
CMS3_k127_3040631_3 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 4.096e-248 780.0
CMS3_k127_3040631_30 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006606 255.0
CMS3_k127_3040631_31 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000002047 244.0
CMS3_k127_3040631_32 - - - - 0.0000000000000000000000000000000000000000000000000000000000008548 211.0
CMS3_k127_3040631_33 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000001219 205.0
CMS3_k127_3040631_34 - - - - 0.000000000000000000000000000000000000000000000000003599 183.0
CMS3_k127_3040631_35 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000001125 177.0
CMS3_k127_3040631_36 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000007524 161.0
CMS3_k127_3040631_37 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000005751 153.0
CMS3_k127_3040631_38 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000004884 143.0
CMS3_k127_3040631_4 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.527e-222 705.0
CMS3_k127_3040631_40 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000001785 121.0
CMS3_k127_3040631_41 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000001935 118.0
CMS3_k127_3040631_42 Domain of unknown function (DUF4405) - - - 0.00000000000000003059 83.0
CMS3_k127_3040631_43 Leucine Rich repeat - - - 0.000000000000001033 91.0
CMS3_k127_3040631_44 Domain of unknown function (DUF4405) - - - 0.000000000000007338 75.0
CMS3_k127_3040631_45 Cysteine dioxygenase K00456 - 1.13.11.20 0.00000000000001467 81.0
CMS3_k127_3040631_48 - - - - 0.000001312 55.0
CMS3_k127_3040631_49 Protein of unknown function (DUF3592) - - - 0.000004039 59.0
CMS3_k127_3040631_5 NADH dehydrogenase K00342 - 1.6.5.3 2.314e-209 661.0
CMS3_k127_3040631_50 Phospholipase_D-nuclease N-terminal - - - 0.00004567 47.0
CMS3_k127_3040631_51 Tetratricopeptide repeat - - - 0.0001434 54.0
CMS3_k127_3040631_6 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 5.839e-201 633.0
CMS3_k127_3040631_7 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 602.0
CMS3_k127_3040631_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 562.0
CMS3_k127_3040631_9 FMN-dependent dehydrogenase K00101,K00467 - 1.1.2.3,1.13.12.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 535.0
CMS3_k127_3044458_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 521.0
CMS3_k127_3044458_1 TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 527.0
CMS3_k127_3044458_10 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0001579 50.0
CMS3_k127_3044458_11 - - - - 0.0003401 51.0
CMS3_k127_3044458_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01760 - 2.5.1.48,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 446.0
CMS3_k127_3044458_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000182 259.0
CMS3_k127_3044458_4 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008937 261.0
CMS3_k127_3044458_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000008125 209.0
CMS3_k127_3044458_6 PFAM Membrane protein of K08972 - - 0.0000000000000000000000000000003211 126.0
CMS3_k127_3044458_7 Y_Y_Y domain - - - 0.000000000000000000000000000004506 132.0
CMS3_k127_3044458_8 - - - - 0.0001089 49.0
CMS3_k127_3044458_9 Protein involved in meta-pathway of phenol degradation - - - 0.0001166 53.0
CMS3_k127_3050029_0 Putative glucoamylase - - - 1.144e-194 622.0
CMS3_k127_3050029_1 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008106 477.0
CMS3_k127_3050029_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000011 138.0
CMS3_k127_3050029_3 TonB-dependent receptor - - - 0.0000000000000005916 77.0
CMS3_k127_3055088_0 TonB-dependent Receptor Plug - - - 0.0 1153.0
CMS3_k127_3055088_1 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0 1055.0
CMS3_k127_3055088_10 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 381.0
CMS3_k127_3055088_11 Bestrophin, RFP-TM, chloride channel K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 359.0
CMS3_k127_3055088_12 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 302.0
CMS3_k127_3055088_13 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 304.0
CMS3_k127_3055088_14 PFAM EamA-like transporter family K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 299.0
CMS3_k127_3055088_15 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000008403 199.0
CMS3_k127_3055088_16 chaperone-mediated protein folding K21010 - - 0.0000000000000000000000000000000000000000000000000000000848 210.0
CMS3_k127_3055088_18 - - - - 0.0000000000000000000000000000000000004446 143.0
CMS3_k127_3055088_19 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000006282 140.0
CMS3_k127_3055088_2 OmpA family - - - 2.5e-322 1004.0
CMS3_k127_3055088_21 - - - - 0.0000000000000000001688 88.0
CMS3_k127_3055088_22 - - - - 0.000000001943 65.0
CMS3_k127_3055088_3 Involved in the tonB-independent uptake of proteins - - - 8.581e-299 945.0
CMS3_k127_3055088_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 9.332e-195 621.0
CMS3_k127_3055088_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 601.0
CMS3_k127_3055088_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 593.0
CMS3_k127_3055088_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 434.0
CMS3_k127_3055088_8 membrane protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 417.0
CMS3_k127_3055088_9 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 410.0
CMS3_k127_313984_0 AsmA-like C-terminal region - - - 2.911e-231 741.0
CMS3_k127_313984_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 583.0
CMS3_k127_313984_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 513.0
CMS3_k127_313984_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007659 492.0
CMS3_k127_313984_4 TIGRFAM TIGR02453 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007003 226.0
CMS3_k127_313984_5 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002538 136.0
CMS3_k127_313984_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000000006361 115.0
CMS3_k127_313984_7 Domain of unknown function (DUF4295) - - - 0.0000000000000000152 82.0
CMS3_k127_3181477_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.947e-233 730.0
CMS3_k127_3192673_0 Belongs to the glycosyl hydrolase 28 family - - - 9.303e-265 824.0
CMS3_k127_3192673_1 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 461.0
CMS3_k127_3192673_2 gluconolactonase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003748 271.0
CMS3_k127_3192673_3 COGs COG2731 Beta-galactosidase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000001202 238.0
CMS3_k127_3192673_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000001551 180.0
CMS3_k127_320644_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1285.0
CMS3_k127_320644_1 Glycosyl transferases group 1 - - - 0.0 1170.0
CMS3_k127_320644_10 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 460.0
CMS3_k127_320644_11 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 429.0
CMS3_k127_320644_12 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 421.0
CMS3_k127_320644_13 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 415.0
CMS3_k127_320644_14 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 413.0
CMS3_k127_320644_15 Fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 400.0
CMS3_k127_320644_16 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 387.0
CMS3_k127_320644_17 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 390.0
CMS3_k127_320644_18 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 371.0
CMS3_k127_320644_19 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 346.0
CMS3_k127_320644_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.994e-316 998.0
CMS3_k127_320644_20 Putative adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 326.0
CMS3_k127_320644_21 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 322.0
CMS3_k127_320644_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 316.0
CMS3_k127_320644_23 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 301.0
CMS3_k127_320644_24 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 296.0
CMS3_k127_320644_25 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 300.0
CMS3_k127_320644_26 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 296.0
CMS3_k127_320644_27 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 289.0
CMS3_k127_320644_28 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000831 280.0
CMS3_k127_320644_29 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006098 269.0
CMS3_k127_320644_3 glycosidase - - - 3.661e-261 810.0
CMS3_k127_320644_30 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001688 253.0
CMS3_k127_320644_31 metabolite transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001035 250.0
CMS3_k127_320644_32 PFAM Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000008865 236.0
CMS3_k127_320644_33 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000009962 198.0
CMS3_k127_320644_35 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.00000000000000000000000000000000000000000000000003916 180.0
CMS3_k127_320644_36 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000002421 180.0
CMS3_k127_320644_37 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000002076 180.0
CMS3_k127_320644_38 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000000002239 166.0
CMS3_k127_320644_39 (GNAT) family K22441 - 2.3.1.57 0.00000000000000000000000000000000000000000006281 166.0
CMS3_k127_320644_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 597.0
CMS3_k127_320644_40 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000006912 164.0
CMS3_k127_320644_41 TIGRFAM Transcriptional regulator, Rrf2 - - - 0.0000000000000000000000000000000000000000002937 162.0
CMS3_k127_320644_42 Cold shock protein domain - - - 0.000000000000000000000000000000000000000002344 160.0
CMS3_k127_320644_43 - - - - 0.00000000000000000000000000000000000000002369 156.0
CMS3_k127_320644_44 permease - - - 0.00000000000000000000000000000000000000004723 159.0
CMS3_k127_320644_45 Cupin domain protein - - - 0.00000000000000000000000000000000000000171 149.0
CMS3_k127_320644_46 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000002622 148.0
CMS3_k127_320644_47 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000008594 141.0
CMS3_k127_320644_48 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000162 137.0
CMS3_k127_320644_49 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000006358 131.0
CMS3_k127_320644_5 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 534.0
CMS3_k127_320644_50 DinB family - - - 0.000000000000000000000000000191 121.0
CMS3_k127_320644_51 cold-shock protein K03704 - - 0.00000000000000000118 87.0
CMS3_k127_320644_52 - - - - 0.0000000000000009461 80.0
CMS3_k127_320644_54 CHAD domain - - - 0.0000000000006809 78.0
CMS3_k127_320644_55 - - - - 0.000000005486 64.0
CMS3_k127_320644_56 YtxH-like protein - - - 0.00000004765 57.0
CMS3_k127_320644_57 - - - - 0.0000002518 54.0
CMS3_k127_320644_58 2'-5' RNA ligase superfamily - - - 0.000001029 57.0
CMS3_k127_320644_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 499.0
CMS3_k127_320644_60 - - - - 0.000003899 48.0
CMS3_k127_320644_62 - - - - 0.000009668 53.0
CMS3_k127_320644_63 - - - - 0.00001723 51.0
CMS3_k127_320644_64 - - - - 0.00002263 52.0
CMS3_k127_320644_65 Belongs to the UPF0337 (CsbD) family - - - 0.00004733 48.0
CMS3_k127_320644_67 - - - - 0.0001707 49.0
CMS3_k127_320644_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 502.0
CMS3_k127_320644_8 Belongs to the RimK family K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 479.0
CMS3_k127_320644_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 475.0
CMS3_k127_3210844_0 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 6.977e-198 634.0
CMS3_k127_3210844_1 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 514.0
CMS3_k127_3210844_10 - - - - 0.00000000003044 72.0
CMS3_k127_3210844_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 488.0
CMS3_k127_3210844_3 SMART DNA mismatch repair protein MutS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 342.0
CMS3_k127_3210844_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 314.0
CMS3_k127_3210844_5 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004987 236.0
CMS3_k127_3210844_6 SnoaL-like domain - - - 0.0000000000000000000000000000000000000001959 154.0
CMS3_k127_3210844_7 Aspartyl protease - - - 0.0000000000000000000000000000121 131.0
CMS3_k127_3210844_8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000004923 86.0
CMS3_k127_3230877_0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 298.0
CMS3_k127_3230877_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004432 273.0
CMS3_k127_3230877_2 - - - - 0.00000000000000000000000000000000000000000000004284 171.0
CMS3_k127_3235189_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1007.0
CMS3_k127_3235189_1 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 2.07e-200 629.0
CMS3_k127_3251143_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1405.0
CMS3_k127_3251143_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1386.0
CMS3_k127_3251143_10 reductase, small chain K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 586.0
CMS3_k127_3251143_11 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 575.0
CMS3_k127_3251143_12 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 573.0
CMS3_k127_3251143_13 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 541.0
CMS3_k127_3251143_14 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 497.0
CMS3_k127_3251143_15 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 462.0
CMS3_k127_3251143_16 Cys/Met metabolism PLP-dependent enzyme K10907,K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 452.0
CMS3_k127_3251143_17 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 434.0
CMS3_k127_3251143_18 Alpha/beta hydrolase family K01563,K22318 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 425.0
CMS3_k127_3251143_19 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 374.0
CMS3_k127_3251143_2 PFAM TonB-dependent Receptor Plug Domain K02014 - - 1.745e-303 951.0
CMS3_k127_3251143_20 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 376.0
CMS3_k127_3251143_21 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 368.0
CMS3_k127_3251143_22 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 362.0
CMS3_k127_3251143_23 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 344.0
CMS3_k127_3251143_24 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 344.0
CMS3_k127_3251143_25 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 312.0
CMS3_k127_3251143_26 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 308.0
CMS3_k127_3251143_27 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 304.0
CMS3_k127_3251143_28 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 292.0
CMS3_k127_3251143_29 PFAM Cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003134 280.0
CMS3_k127_3251143_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.682e-299 929.0
CMS3_k127_3251143_30 slime layer polysaccharide biosynthetic process K16710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002675 287.0
CMS3_k127_3251143_31 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003222 283.0
CMS3_k127_3251143_32 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001698 274.0
CMS3_k127_3251143_33 PFAM Scaffold protein Nfu NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005454 265.0
CMS3_k127_3251143_34 ZIP Zinc transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000164 266.0
CMS3_k127_3251143_35 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000005399 259.0
CMS3_k127_3251143_36 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000002321 242.0
CMS3_k127_3251143_37 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005464 241.0
CMS3_k127_3251143_38 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003638 234.0
CMS3_k127_3251143_39 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001145 251.0
CMS3_k127_3251143_4 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 1.71e-261 812.0
CMS3_k127_3251143_40 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000002469 234.0
CMS3_k127_3251143_41 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000001592 221.0
CMS3_k127_3251143_42 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000001609 221.0
CMS3_k127_3251143_43 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000001078 216.0
CMS3_k127_3251143_44 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000002404 218.0
CMS3_k127_3251143_45 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000009199 205.0
CMS3_k127_3251143_46 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000002975 200.0
CMS3_k127_3251143_47 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000001417 199.0
CMS3_k127_3251143_48 IPT/TIG domain - - - 0.00000000000000000000000000000000000000000000000001882 198.0
CMS3_k127_3251143_49 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000008197 177.0
CMS3_k127_3251143_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 9.852e-230 722.0
CMS3_k127_3251143_50 methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000008631 175.0
CMS3_k127_3251143_51 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000004496 167.0
CMS3_k127_3251143_52 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000008883 176.0
CMS3_k127_3251143_53 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000000000000000004993 162.0
CMS3_k127_3251143_54 TM2 domain - - - 0.000000000000000000000000000000000000000002719 158.0
CMS3_k127_3251143_55 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000001625 142.0
CMS3_k127_3251143_56 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000482 142.0
CMS3_k127_3251143_57 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000001643 118.0
CMS3_k127_3251143_58 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000002052 133.0
CMS3_k127_3251143_59 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000003171 109.0
CMS3_k127_3251143_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 6.805e-219 701.0
CMS3_k127_3251143_60 Protein of unknown function (DUF2752) - - - 0.0000000000000000000005165 98.0
CMS3_k127_3251143_61 - - - - 0.00000000000000001024 83.0
CMS3_k127_3251143_62 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.000000000000002971 76.0
CMS3_k127_3251143_63 Carboxylesterase family - - - 0.0000000000008411 79.0
CMS3_k127_3251143_64 WD40 repeats - - - 0.000000000001389 82.0
CMS3_k127_3251143_7 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 5.329e-205 643.0
CMS3_k127_3251143_8 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 612.0
CMS3_k127_3251143_9 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 595.0
CMS3_k127_3259640_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 563.0
CMS3_k127_3259640_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005716 277.0
CMS3_k127_3259640_2 GTPase activator activity - - - 0.0000000000000000000000000006175 128.0
CMS3_k127_32659_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1171.0
CMS3_k127_32659_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 472.0
CMS3_k127_32659_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000001398 168.0
CMS3_k127_32659_3 - - - - 0.00000000000000000000000000000000000000002158 159.0
CMS3_k127_3279287_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 549.0
CMS3_k127_3279287_1 Caspase domain - - - 0.00000000000000000000000003978 113.0
CMS3_k127_3283494_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1178.0
CMS3_k127_3283580_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.867e-223 699.0
CMS3_k127_3283580_1 Belongs to the BshC family K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 544.0
CMS3_k127_3283580_2 - - - - 0.00000000000000000000000000000000000000000000000000000001026 205.0
CMS3_k127_3283580_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000001697 111.0
CMS3_k127_3283580_4 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000009492 91.0
CMS3_k127_3310903_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.902e-311 957.0
CMS3_k127_3310903_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 571.0
CMS3_k127_3310903_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001418 264.0
CMS3_k127_3310903_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000004414 238.0
CMS3_k127_3310903_4 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000000000000000000002984 195.0
CMS3_k127_331471_0 CarboxypepD_reg-like domain - - - 1.159e-300 945.0
CMS3_k127_331471_1 von Willebrand factor, type A K07114 - - 2.245e-260 817.0
CMS3_k127_331471_10 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 296.0
CMS3_k127_331471_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009054 269.0
CMS3_k127_331471_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000812 214.0
CMS3_k127_331471_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000004259 188.0
CMS3_k127_331471_14 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000000000000000000004684 187.0
CMS3_k127_331471_16 Protein of unknown function (DUF4230) - - - 0.0000000000000000976 88.0
CMS3_k127_331471_17 - - - - 0.00000000000002822 76.0
CMS3_k127_331471_2 MacB-like periplasmic core domain - - - 2.194e-254 808.0
CMS3_k127_331471_3 PFAM DeoC LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 565.0
CMS3_k127_331471_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 493.0
CMS3_k127_331471_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 473.0
CMS3_k127_331471_6 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 417.0
CMS3_k127_331471_7 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 357.0
CMS3_k127_331471_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 336.0
CMS3_k127_331471_9 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 299.0
CMS3_k127_3342514_0 COGs COG1523 Type II secretory pathway pullulanase PulA and related glycosidase K01200 - 3.2.1.41 2.822e-234 741.0
CMS3_k127_3342514_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 357.0
CMS3_k127_3342514_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000006041 187.0
CMS3_k127_3342514_3 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000001062 104.0
CMS3_k127_3342514_4 cheY-homologous receiver domain - - - 0.000000000000000000000006721 105.0
CMS3_k127_3472219_0 Involved in the tonB-independent uptake of proteins - - - 0.0 1163.0
CMS3_k127_3472219_1 Peptidase family C25 - - - 6.847e-310 985.0
CMS3_k127_3472219_10 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 306.0
CMS3_k127_3472219_11 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 294.0
CMS3_k127_3472219_12 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006664 290.0
CMS3_k127_3472219_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000001992 239.0
CMS3_k127_3472219_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 7.464e-248 768.0
CMS3_k127_3472219_3 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 604.0
CMS3_k127_3472219_4 PFAM Cys Met metabolism K01758,K01760 - 4.4.1.1,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 537.0
CMS3_k127_3472219_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 515.0
CMS3_k127_3472219_6 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 454.0
CMS3_k127_3472219_7 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 440.0
CMS3_k127_3472219_8 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 361.0
CMS3_k127_3472219_9 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 327.0
CMS3_k127_3672227_0 PFAM GlcNAc-PI de-N-acetylase - - - 2.29e-298 937.0
CMS3_k127_3672227_1 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 1.626e-295 926.0
CMS3_k127_3672227_10 gas vesicle protein - - - 0.000000002589 62.0
CMS3_k127_3672227_11 - - - - 0.00000002003 61.0
CMS3_k127_3672227_2 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 3.847e-219 692.0
CMS3_k127_3672227_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 3.968e-202 643.0
CMS3_k127_3672227_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 494.0
CMS3_k127_3672227_5 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 308.0
CMS3_k127_3672227_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000001021 230.0
CMS3_k127_3672227_7 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000005557 211.0
CMS3_k127_3672227_8 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000006757 163.0
CMS3_k127_3672227_9 Transcriptional regulator - - - 0.0000000000000000003021 89.0
CMS3_k127_3716279_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1065.0
CMS3_k127_3716279_1 MacB-like periplasmic core domain K02004 - - 2.137e-239 764.0
CMS3_k127_3716279_10 Peptidase family M20/M25/M40 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 484.0
CMS3_k127_3716279_11 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 462.0
CMS3_k127_3716279_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 464.0
CMS3_k127_3716279_13 peptide catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 469.0
CMS3_k127_3716279_14 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 426.0
CMS3_k127_3716279_15 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 430.0
CMS3_k127_3716279_16 isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 323.0
CMS3_k127_3716279_17 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
CMS3_k127_3716279_18 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003857 271.0
CMS3_k127_3716279_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003131 257.0
CMS3_k127_3716279_2 Domain in cystathionine beta-synthase and other proteins. - - - 2.429e-238 751.0
CMS3_k127_3716279_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006921 248.0
CMS3_k127_3716279_22 - - - - 0.0000000000000000000000000000000000000000000001369 173.0
CMS3_k127_3716279_23 PFAM transcriptional regulator PadR family protein - - - 0.00000000000000000000000000000000000000000001236 164.0
CMS3_k127_3716279_24 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000006014 149.0
CMS3_k127_3716279_25 Bacterial transcription activator, effector binding domain K13653 - - 0.00000000000000000000000000000000000001009 149.0
CMS3_k127_3716279_26 Autotransporter beta-domain - - - 0.0000000000000000003036 94.0
CMS3_k127_3716279_27 - - - - 0.00000000000000003969 86.0
CMS3_k127_3716279_28 - - - - 0.0000000000001938 73.0
CMS3_k127_3716279_29 Competence protein ComEC K02238 - - 0.000000000008368 77.0
CMS3_k127_3716279_3 FtsX-like permease family - - - 3.864e-228 734.0
CMS3_k127_3716279_4 C-terminal region of aryl-sulfatase K01130 - 3.1.6.1 1.973e-205 649.0
CMS3_k127_3716279_5 MacB-like periplasmic core domain K02004 - - 2.579e-205 665.0
CMS3_k127_3716279_6 Domain of unknown function (DUF3471) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 604.0
CMS3_k127_3716279_7 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 581.0
CMS3_k127_3716279_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 528.0
CMS3_k127_3716279_9 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 520.0
CMS3_k127_3826322_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 8.18e-227 708.0
CMS3_k127_3826322_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 6.326e-204 640.0
CMS3_k127_3826322_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 8.303e-195 614.0
CMS3_k127_3826322_3 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 572.0
CMS3_k127_3826322_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 545.0
CMS3_k127_3826322_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 531.0
CMS3_k127_3826322_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008459 485.0
CMS3_k127_3826322_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 402.0
CMS3_k127_3826322_8 Cell division protein K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000069 256.0
CMS3_k127_3845625_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0 1131.0
CMS3_k127_3845625_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 2.167e-195 614.0
CMS3_k127_3845625_2 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 514.0
CMS3_k127_3845625_3 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 437.0
CMS3_k127_3845625_4 PFAM MotA TolQ ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 352.0
CMS3_k127_3845625_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000635 228.0
CMS3_k127_3845625_6 biopolymer transport protein K03832 - - 0.00000000000000000000000000000000000000000000000000002224 194.0
CMS3_k127_3845625_7 Type I restriction enzyme R Protein - - - 0.00000000000000000000000000000000000000000000001058 177.0
CMS3_k127_3845625_9 transferase activity, transferring acyl groups - - - 0.0000000003749 65.0
CMS3_k127_3847550_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 293.0
CMS3_k127_3847550_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 285.0
CMS3_k127_3847550_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000002146 139.0
CMS3_k127_3847550_3 PFAM ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.0000000000000000000000000000000002855 136.0
CMS3_k127_3853341_0 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 432.0
CMS3_k127_3853341_1 Glycogen debranching enzyme, glucanotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 426.0
CMS3_k127_3884726_0 Peptidase family C25 - - - 0.0 1447.0
CMS3_k127_3884726_1 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 2.923e-293 907.0
CMS3_k127_3884726_10 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000007517 134.0
CMS3_k127_3884726_12 PFAM tail sheath protein K06907 - - 0.000000000000000001188 88.0
CMS3_k127_3884726_13 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000001354 83.0
CMS3_k127_3884726_14 PFAM Heavy-metal-associated domain - - - 0.0000000000000003262 81.0
CMS3_k127_3884726_15 Transcriptional regulator K10947 - - 0.0000000000000005609 77.0
CMS3_k127_3884726_16 Pectinesterase K01051 - 3.1.1.11 0.00000000001037 68.0
CMS3_k127_3884726_2 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 7.348e-235 751.0
CMS3_k127_3884726_3 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 437.0
CMS3_k127_3884726_4 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 417.0
CMS3_k127_3884726_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 340.0
CMS3_k127_3884726_6 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 326.0
CMS3_k127_3884726_7 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000004201 220.0
CMS3_k127_3884726_8 - - - - 0.000000000000000000000000000000000000000000000000000004421 196.0
CMS3_k127_3884726_9 Domain of unknown function (DUF4349) - - - 0.00000000000000000000000000000000000000002715 162.0
CMS3_k127_3885357_0 Protein of unknown function (DUF2723) - - - 0.0 1265.0
CMS3_k127_3885357_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1115.0
CMS3_k127_3885357_10 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 464.0
CMS3_k127_3885357_11 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 446.0
CMS3_k127_3885357_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 441.0
CMS3_k127_3885357_13 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 428.0
CMS3_k127_3885357_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 419.0
CMS3_k127_3885357_15 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 411.0
CMS3_k127_3885357_16 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 393.0
CMS3_k127_3885357_17 asparagine synthase (Glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 408.0
CMS3_k127_3885357_18 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 377.0
CMS3_k127_3885357_19 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009895 371.0
CMS3_k127_3885357_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1095.0
CMS3_k127_3885357_20 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 357.0
CMS3_k127_3885357_21 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 346.0
CMS3_k127_3885357_22 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 332.0
CMS3_k127_3885357_23 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 321.0
CMS3_k127_3885357_24 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 304.0
CMS3_k127_3885357_25 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 305.0
CMS3_k127_3885357_26 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001283 290.0
CMS3_k127_3885357_27 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006943 278.0
CMS3_k127_3885357_28 PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008586 305.0
CMS3_k127_3885357_29 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002879 272.0
CMS3_k127_3885357_3 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 2.615e-249 775.0
CMS3_k127_3885357_30 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000002233 252.0
CMS3_k127_3885357_31 Glycosyltransferase like family 2 K17250 - 2.4.1.293 0.0000000000000000000000000000000000000000000000000000000000000000000005531 246.0
CMS3_k127_3885357_32 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000004466 236.0
CMS3_k127_3885357_33 transcriptional regulator K03719,K05800 - - 0.000000000000000000000000000000000000000000000000000000000000000000173 232.0
CMS3_k127_3885357_34 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005874 232.0
CMS3_k127_3885357_35 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000001441 228.0
CMS3_k127_3885357_36 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000002465 224.0
CMS3_k127_3885357_37 - - - - 0.00000000000000000000000000000000000000000000000000000000000002316 220.0
CMS3_k127_3885357_38 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000008135 221.0
CMS3_k127_3885357_39 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000005188 219.0
CMS3_k127_3885357_4 Isocitrate dehydrogenase K00031 - 1.1.1.42 3.975e-227 708.0
CMS3_k127_3885357_40 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000001631 208.0
CMS3_k127_3885357_41 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000003901 200.0
CMS3_k127_3885357_42 - - - - 0.0000000000000000000000000000000000000000000000000000008622 207.0
CMS3_k127_3885357_43 AAA domain - - - 0.0000000000000000000000000000000000000000000000000008104 188.0
CMS3_k127_3885357_44 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000006917 156.0
CMS3_k127_3885357_45 TIGRFAM Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000329 130.0
CMS3_k127_3885357_46 YCII-related domain - - - 0.0000000000000000000000000000006083 125.0
CMS3_k127_3885357_47 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772,K03773 - 5.2.1.8 0.00000000000000000000000002619 115.0
CMS3_k127_3885357_48 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000000000000006503 90.0
CMS3_k127_3885357_49 Protein of unknown function (DUF2961) - - - 0.0000000000003753 70.0
CMS3_k127_3885357_5 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 570.0
CMS3_k127_3885357_50 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0008789 47.0
CMS3_k127_3885357_6 PFAM PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 565.0
CMS3_k127_3885357_7 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 539.0
CMS3_k127_3885357_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 507.0
CMS3_k127_3885357_9 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 466.0
CMS3_k127_3897707_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 4.852e-205 647.0
CMS3_k127_3897707_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 598.0
CMS3_k127_3897707_2 metallopeptidase activity K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 520.0
CMS3_k127_3897707_3 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 372.0
CMS3_k127_3897707_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 368.0
CMS3_k127_3897707_5 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 355.0
CMS3_k127_3897707_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 293.0
CMS3_k127_3897707_7 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.0000000000000000000000000000000000000001801 152.0
CMS3_k127_3897707_8 PFAM ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.00000000000000000000000000000000003786 138.0
CMS3_k127_3904128_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 540.0
CMS3_k127_3904128_1 - - - - 0.00000000000000000000000000009002 121.0
CMS3_k127_3904128_2 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000008507 51.0
CMS3_k127_3924944_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2498.0
CMS3_k127_3924944_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2282.0
CMS3_k127_3924944_10 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 367.0
CMS3_k127_3924944_11 TIGRFAM LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 346.0
CMS3_k127_3924944_12 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 335.0
CMS3_k127_3924944_13 Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 316.0
CMS3_k127_3924944_14 CHASE2 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 322.0
CMS3_k127_3924944_15 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001833 301.0
CMS3_k127_3924944_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002926 266.0
CMS3_k127_3924944_17 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005178 262.0
CMS3_k127_3924944_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006424 264.0
CMS3_k127_3924944_19 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006529 264.0
CMS3_k127_3924944_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1215.0
CMS3_k127_3924944_20 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001703 245.0
CMS3_k127_3924944_21 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000004414 238.0
CMS3_k127_3924944_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001097 238.0
CMS3_k127_3924944_23 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005673 226.0
CMS3_k127_3924944_24 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000007419 215.0
CMS3_k127_3924944_25 TonB dependent receptor K16092 - - 0.0000000000000000000000000000000000000000000000000000002155 218.0
CMS3_k127_3924944_26 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000005543 193.0
CMS3_k127_3924944_27 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000000000000000000000000000005126 191.0
CMS3_k127_3924944_28 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000001601 187.0
CMS3_k127_3924944_29 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000002218 85.0
CMS3_k127_3924944_3 Glycosyl hydrolase family 3 N terminal domain - - - 8.525e-242 779.0
CMS3_k127_3924944_30 Cache domain - - - 0.00000000000000007768 95.0
CMS3_k127_3924944_31 - - - - 0.00000000001369 66.0
CMS3_k127_3924944_4 PIN domain K07175 - - 4.535e-236 736.0
CMS3_k127_3924944_5 magnesium chelatase K03405 - 6.6.1.1 1.089e-235 738.0
CMS3_k127_3924944_6 PFAM Glycosyl transferases group 1 K00754 - - 8.649e-194 609.0
CMS3_k127_3924944_7 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 571.0
CMS3_k127_3924944_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 520.0
CMS3_k127_3924944_9 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 441.0
CMS3_k127_3930654_0 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 1.102e-317 988.0
CMS3_k127_3930654_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.227e-275 865.0
CMS3_k127_3930654_10 Crp-like helix-turn-helix domain K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 323.0
CMS3_k127_3930654_11 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 322.0
CMS3_k127_3930654_12 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 293.0
CMS3_k127_3930654_13 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006163 266.0
CMS3_k127_3930654_14 beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001632 259.0
CMS3_k127_3930654_15 COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000005493 248.0
CMS3_k127_3930654_16 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000001449 233.0
CMS3_k127_3930654_17 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000009331 214.0
CMS3_k127_3930654_18 - - - - 0.0000000000000000000000000000000000000000000588 169.0
CMS3_k127_3930654_19 MobA-like NTP transferase domain K07141,K19190 - 1.1.1.328,2.7.7.76 0.00000000000000000000000000000000000000018 157.0
CMS3_k127_3930654_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 7.391e-259 803.0
CMS3_k127_3930654_20 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000000000000000000002088 151.0
CMS3_k127_3930654_21 Cytochrome C oxidase, cbb3-type, subunit III K00405 - - 0.0000000000000000000000000000000000009076 143.0
CMS3_k127_3930654_22 Cytochrome c, class I - - - 0.00000000000000000000000000000000005974 139.0
CMS3_k127_3930654_23 - - - - 0.000000000000000000000008235 107.0
CMS3_k127_3930654_24 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.0000000000000000000002018 102.0
CMS3_k127_3930654_25 - - - - 0.0000000002355 71.0
CMS3_k127_3930654_3 TonB-dependent Receptor Plug - - - 4.186e-213 688.0
CMS3_k127_3930654_4 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 1.862e-212 673.0
CMS3_k127_3930654_5 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 8.063e-212 668.0
CMS3_k127_3930654_6 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 493.0
CMS3_k127_3930654_7 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 506.0
CMS3_k127_3930654_8 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 423.0
CMS3_k127_3930654_9 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 349.0
CMS3_k127_3933915_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 542.0
CMS3_k127_3933915_1 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000557 208.0
CMS3_k127_3933915_2 PFAM Peptidase family M23 - - - 0.00002116 50.0
CMS3_k127_3946976_0 Heat shock 70 kDa protein K04043 - - 0.0 1047.0
CMS3_k127_3946976_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.033e-240 752.0
CMS3_k127_3946976_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 336.0
CMS3_k127_3946976_11 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 339.0
CMS3_k127_3946976_12 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 325.0
CMS3_k127_3946976_13 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 321.0
CMS3_k127_3946976_14 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 299.0
CMS3_k127_3946976_15 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000001231 235.0
CMS3_k127_3946976_16 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000000000000000005427 155.0
CMS3_k127_3946976_17 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000005394 125.0
CMS3_k127_3946976_18 Protein of unknown function (DUF493) - - - 0.0000000000000000000000008831 106.0
CMS3_k127_3946976_19 PFAM ATP synthase, Delta Epsilon chain, beta-sandwich domain K02114 - - 0.000000000000000000000001013 108.0
CMS3_k127_3946976_2 Insulinase (Peptidase family M16) K07263 - - 1.014e-217 692.0
CMS3_k127_3946976_20 - - - - 0.00000000000000000000000152 106.0
CMS3_k127_3946976_21 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000008131 77.0
CMS3_k127_3946976_3 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 5.108e-212 679.0
CMS3_k127_3946976_4 Glu Leu Phe Val dehydrogenase K00261 - 1.4.1.3 8.666e-204 640.0
CMS3_k127_3946976_5 CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 542.0
CMS3_k127_3946976_6 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 536.0
CMS3_k127_3946976_7 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 501.0
CMS3_k127_3946976_8 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 494.0
CMS3_k127_3946976_9 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 360.0
CMS3_k127_3948618_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1732.0
CMS3_k127_3948618_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1473.0
CMS3_k127_3948618_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 367.0
CMS3_k127_3948618_11 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 361.0
CMS3_k127_3948618_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 292.0
CMS3_k127_3948618_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 282.0
CMS3_k127_3948618_14 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008152 264.0
CMS3_k127_3948618_15 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003153 245.0
CMS3_k127_3948618_16 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006085 234.0
CMS3_k127_3948618_17 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000001559 218.0
CMS3_k127_3948618_18 - - - - 0.00000000000000000000000000000000000000000000000000000000001686 214.0
CMS3_k127_3948618_19 TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - 0.0000000000000000000000000000000000000000000000000000000000958 209.0
CMS3_k127_3948618_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 8.827e-292 910.0
CMS3_k127_3948618_21 photosystem II stabilization - - - 0.0000000000000000000000000000000000000000000000000007858 196.0
CMS3_k127_3948618_22 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000002159 181.0
CMS3_k127_3948618_23 DoxX - - - 0.00000000000000000000000000000000000002827 148.0
CMS3_k127_3948618_24 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000006441 143.0
CMS3_k127_3948618_25 RNA-binding protein - - - 0.00000000000000000000000008787 109.0
CMS3_k127_3948618_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.736e-224 711.0
CMS3_k127_3948618_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.469e-217 679.0
CMS3_k127_3948618_5 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 590.0
CMS3_k127_3948618_6 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 498.0
CMS3_k127_3948618_7 Helix-hairpin-helix motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 493.0
CMS3_k127_3948618_8 PFAM surface antigen variable number repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 440.0
CMS3_k127_3948618_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 383.0
CMS3_k127_3952402_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 455.0
CMS3_k127_3952402_1 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 404.0
CMS3_k127_3952402_2 TIGRFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 419.0
CMS3_k127_3952402_3 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 301.0
CMS3_k127_3952402_4 Catalyzes the transfer of sulfuryl groups between phenolic compounds K01023 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.8.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003136 294.0
CMS3_k127_3952402_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002127 265.0
CMS3_k127_3952402_6 PFAM DsrE DsrF-like family K09004 - - 0.000000000000000000000000000000003338 133.0
CMS3_k127_3952402_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000001322 108.0
CMS3_k127_3952402_9 endonuclease I - - - 0.0000000001785 74.0
CMS3_k127_3959928_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.0 1290.0
CMS3_k127_3959928_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1150.0
CMS3_k127_3959928_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 344.0
CMS3_k127_3959928_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 336.0
CMS3_k127_3959928_12 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 332.0
CMS3_k127_3959928_13 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 288.0
CMS3_k127_3959928_14 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006461 272.0
CMS3_k127_3959928_15 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000001071 247.0
CMS3_k127_3959928_16 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000001484 234.0
CMS3_k127_3959928_17 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000005683 218.0
CMS3_k127_3959928_18 Membrane K08988 - - 0.000000000000000000000000000000000000000000000000000000000001384 216.0
CMS3_k127_3959928_19 - - - - 0.000000000000000000000000000000000000000000000000000000000002561 226.0
CMS3_k127_3959928_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.386e-225 704.0
CMS3_k127_3959928_20 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000003833 185.0
CMS3_k127_3959928_21 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000001012 160.0
CMS3_k127_3959928_22 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000007906 135.0
CMS3_k127_3959928_23 toxin biosynthetic process K03558 - - 0.0000000000000000000003816 102.0
CMS3_k127_3959928_3 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 531.0
CMS3_k127_3959928_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 485.0
CMS3_k127_3959928_5 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 421.0
CMS3_k127_3959928_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 405.0
CMS3_k127_3959928_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 378.0
CMS3_k127_3959928_8 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 377.0
CMS3_k127_3959928_9 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 369.0
CMS3_k127_3963285_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1283.0
CMS3_k127_3963285_1 Belongs to the FGGY kinase family K00851 - 2.7.1.12 3.548e-227 713.0
CMS3_k127_3963285_2 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 582.0
CMS3_k127_3963285_3 InterPro IPR005181 K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 542.0
CMS3_k127_3963285_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 342.0
CMS3_k127_4005049_0 OPT oligopeptide transporter protein - - - 1.973e-297 925.0
CMS3_k127_4005049_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.115e-291 902.0
CMS3_k127_4005049_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000456 233.0
CMS3_k127_4005049_11 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000002394 219.0
CMS3_k127_4005049_12 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000006608 179.0
CMS3_k127_4005049_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000001944 153.0
CMS3_k127_4005049_14 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000001396 152.0
CMS3_k127_4005049_15 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000003091 117.0
CMS3_k127_4005049_16 - - - - 0.0000000000000000000000000647 119.0
CMS3_k127_4005049_17 Protein of unknown function (DUF2905) - - - 0.000000000000000000000001062 104.0
CMS3_k127_4005049_18 Helix-turn-helix domain - - - 0.000000000000000000000001533 116.0
CMS3_k127_4005049_19 YceI-like domain - - - 0.0000000000000000000006143 108.0
CMS3_k127_4005049_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 3.857e-280 868.0
CMS3_k127_4005049_20 Protein of unknown function (DUF3667) - - - 0.00000000000000000001823 100.0
CMS3_k127_4005049_21 D-alanyl-D-alanine carboxypeptidase K17733 - - 0.0000000000000000006702 97.0
CMS3_k127_4005049_22 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000006987 89.0
CMS3_k127_4005049_23 - - - - 0.000000003203 65.0
CMS3_k127_4005049_3 ABC transporter transmembrane region K11085 - - 1.064e-278 865.0
CMS3_k127_4005049_4 symporter activity K03307,K11928 - - 1.254e-225 707.0
CMS3_k127_4005049_5 sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 447.0
CMS3_k127_4005049_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 311.0
CMS3_k127_4005049_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000179 271.0
CMS3_k127_4005049_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008519 252.0
CMS3_k127_4005049_9 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001006 252.0
CMS3_k127_4006301_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000027 273.0
CMS3_k127_4006301_1 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000001734 229.0
CMS3_k127_4006301_2 PFAM Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000004916 229.0
CMS3_k127_4006301_3 Resolvase, N terminal domain K06400 - - 0.000000000002171 78.0
CMS3_k127_4007197_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1648.0
CMS3_k127_4007197_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 582.0
CMS3_k127_4007197_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 360.0
CMS3_k127_4008794_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 7.504e-277 861.0
CMS3_k127_4008794_1 Formate--tetrahydrofolate ligase K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 6.314e-267 830.0
CMS3_k127_4008794_10 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 545.0
CMS3_k127_4008794_11 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 543.0
CMS3_k127_4008794_12 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 534.0
CMS3_k127_4008794_13 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 459.0
CMS3_k127_4008794_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 438.0
CMS3_k127_4008794_15 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 386.0
CMS3_k127_4008794_16 Domain of unknown function (DUF4835) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 372.0
CMS3_k127_4008794_17 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 359.0
CMS3_k127_4008794_18 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 340.0
CMS3_k127_4008794_19 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 334.0
CMS3_k127_4008794_2 lysine biosynthetic process via aminoadipic acid - - - 7.195e-262 826.0
CMS3_k127_4008794_20 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 321.0
CMS3_k127_4008794_21 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 296.0
CMS3_k127_4008794_22 regulator of cell autolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002617 264.0
CMS3_k127_4008794_23 regulator of cell autolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000001688 239.0
CMS3_k127_4008794_24 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001425 226.0
CMS3_k127_4008794_25 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000001573 224.0
CMS3_k127_4008794_26 - - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
CMS3_k127_4008794_27 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000001028 203.0
CMS3_k127_4008794_28 - - - - 0.00000000000000000000000000000000000000000000000005414 193.0
CMS3_k127_4008794_29 - - - - 0.00000000000000000000000000000000000000000000000009745 185.0
CMS3_k127_4008794_3 lysine biosynthetic process via aminoadipic acid - - - 1.631e-255 808.0
CMS3_k127_4008794_30 Beta-lactamase - - - 0.00000000000000000000000000000000000000000006912 164.0
CMS3_k127_4008794_31 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.000000000000000000000000000000000000000173 153.0
CMS3_k127_4008794_32 - - - - 0.000000000000000000001062 105.0
CMS3_k127_4008794_33 - - - - 0.0000000000004013 72.0
CMS3_k127_4008794_34 COG3209 Rhs family protein - - - 0.00000007649 60.0
CMS3_k127_4008794_4 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 2.19e-234 742.0
CMS3_k127_4008794_5 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.538e-195 617.0
CMS3_k127_4008794_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 604.0
CMS3_k127_4008794_7 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 603.0
CMS3_k127_4008794_8 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 598.0
CMS3_k127_4008794_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 553.0
CMS3_k127_4010636_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1320.0
CMS3_k127_4010636_1 TonB dependent receptor - - - 0.0 1150.0
CMS3_k127_4010636_10 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 385.0
CMS3_k127_4010636_11 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 378.0
CMS3_k127_4010636_12 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 338.0
CMS3_k127_4010636_13 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 299.0
CMS3_k127_4010636_14 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000006536 265.0
CMS3_k127_4010636_15 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003521 280.0
CMS3_k127_4010636_16 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006202 232.0
CMS3_k127_4010636_17 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001227 235.0
CMS3_k127_4010636_18 SufE protein probably involved in Fe-S center assembly K02426 - - 0.0000000000000000000000000000000000000000000000000000000000001682 214.0
CMS3_k127_4010636_19 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.00000000000000000000000000000000000000000000000000007684 194.0
CMS3_k127_4010636_2 TIGRFAM FeS assembly protein SufB K09014 - - 1.379e-284 877.0
CMS3_k127_4010636_20 pfam nudix - - - 0.00000000000000000000000000000000000000000000000001867 186.0
CMS3_k127_4010636_21 FeS assembly SUF system protein - - - 0.000000000000000000000000000000000000000000000001073 178.0
CMS3_k127_4010636_22 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000002472 175.0
CMS3_k127_4010636_23 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000009237 124.0
CMS3_k127_4010636_24 Putative auto-transporter adhesin, head GIN domain - - - 0.00000007717 57.0
CMS3_k127_4010636_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 1.286e-250 780.0
CMS3_k127_4010636_4 Outer membrane receptor for Fe3 -dicitrate K16091 - - 3.236e-212 685.0
CMS3_k127_4010636_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.082e-198 625.0
CMS3_k127_4010636_6 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 503.0
CMS3_k127_4010636_7 TIGRFAM FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 429.0
CMS3_k127_4010636_8 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 414.0
CMS3_k127_4010636_9 Male sterility protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 408.0
CMS3_k127_4013540_0 transposase activity - - - 0.00000000000000000000000000000000000000000000000008765 192.0
CMS3_k127_4013540_1 PIN domain - - - 0.00000002616 59.0
CMS3_k127_4013540_2 SpoVT / AbrB like domain - - - 0.0002477 48.0
CMS3_k127_4089221_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 3.364e-300 933.0
CMS3_k127_4089221_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.545e-228 750.0
CMS3_k127_4089221_11 - - - - 0.000000000000001454 79.0
CMS3_k127_4089221_2 Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 398.0
CMS3_k127_4089221_3 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 353.0
CMS3_k127_4089221_4 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 346.0
CMS3_k127_4089221_5 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003514 273.0
CMS3_k127_4089221_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006871 263.0
CMS3_k127_4089221_7 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008056 246.0
CMS3_k127_4089221_8 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000007294 199.0
CMS3_k127_4089221_9 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000001731 122.0
CMS3_k127_4096532_0 Choline dehydrogenase and related - - - 1.211e-295 915.0
CMS3_k127_4096532_1 CHAT domain - - - 2.513e-229 739.0
CMS3_k127_4096532_10 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 315.0
CMS3_k127_4096532_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 293.0
CMS3_k127_4096532_12 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005194 272.0
CMS3_k127_4096532_13 Glycosyl transferase family 2 K12984 - - 0.00000000000000000000000000000000000000000000000000000000000000004461 232.0
CMS3_k127_4096532_14 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000004745 216.0
CMS3_k127_4096532_15 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000000004259 207.0
CMS3_k127_4096532_16 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000003701 203.0
CMS3_k127_4096532_17 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000003903 184.0
CMS3_k127_4096532_18 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000005339 155.0
CMS3_k127_4096532_19 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000006517 156.0
CMS3_k127_4096532_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 3.186e-213 672.0
CMS3_k127_4096532_20 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000000003613 129.0
CMS3_k127_4096532_21 chain release factor K15034 - - 0.00000000000000000000000002659 114.0
CMS3_k127_4096532_22 - - - - 0.00000000000000000000008761 108.0
CMS3_k127_4096532_23 - - - - 0.000000000002306 68.0
CMS3_k127_4096532_3 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 582.0
CMS3_k127_4096532_4 Belongs to the UPF0176 family K07146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 488.0
CMS3_k127_4096532_5 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 483.0
CMS3_k127_4096532_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 472.0
CMS3_k127_4096532_7 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 314.0
CMS3_k127_4096532_8 PFAM Glycosyl transferase family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 318.0
CMS3_k127_4096532_9 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 315.0
CMS3_k127_4126803_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.0 1247.0
CMS3_k127_4126803_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1039.0
CMS3_k127_4126803_10 Alpha amylase, catalytic domain - - - 5.098e-210 668.0
CMS3_k127_4126803_11 Domain of Unknown Function (DUF349) - - - 7.854e-209 667.0
CMS3_k127_4126803_12 PFAM nucleoside H symporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 586.0
CMS3_k127_4126803_13 AP endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 577.0
CMS3_k127_4126803_14 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 567.0
CMS3_k127_4126803_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 533.0
CMS3_k127_4126803_16 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 508.0
CMS3_k127_4126803_17 Thioredoxin reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 500.0
CMS3_k127_4126803_18 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 477.0
CMS3_k127_4126803_19 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 445.0
CMS3_k127_4126803_2 phosphorylase K00691 - 2.4.1.8 0.0 1016.0
CMS3_k127_4126803_20 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 325.0
CMS3_k127_4126803_21 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006361 277.0
CMS3_k127_4126803_22 PA14 K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003752 277.0
CMS3_k127_4126803_23 PFAM Haloacid dehalogenase domain protein hydrolase K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000002219 259.0
CMS3_k127_4126803_24 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001924 253.0
CMS3_k127_4126803_25 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000004861 171.0
CMS3_k127_4126803_26 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001381 139.0
CMS3_k127_4126803_27 PFAM Cytochrome c, class I K08738 - - 0.00000000000000000000000004068 111.0
CMS3_k127_4126803_28 Belongs to the glycosyl hydrolase 13 family - - - 0.000000000000000000002885 100.0
CMS3_k127_4126803_3 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K06959 - - 2.202e-319 993.0
CMS3_k127_4126803_4 Tetratricopeptide repeat - - - 1.915e-306 978.0
CMS3_k127_4126803_5 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.526e-304 945.0
CMS3_k127_4126803_6 Belongs to the glycosyl hydrolase 57 family - - - 3.023e-289 908.0
CMS3_k127_4126803_7 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 1.855e-250 783.0
CMS3_k127_4126803_8 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.147e-232 736.0
CMS3_k127_4126803_9 Tetratricopeptide repeat - - - 3.193e-219 693.0
CMS3_k127_4189680_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 604.0
CMS3_k127_4189680_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 387.0
CMS3_k127_4189680_2 para-aminobenzoate synthase component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 332.0
CMS3_k127_4189680_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 297.0
CMS3_k127_4203465_0 4Fe-4S dicluster domain K00184 - - 0.0 1241.0
CMS3_k127_4203465_1 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1096.0
CMS3_k127_4203465_10 Quinol cytochrome c oxidoreductase membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004757 267.0
CMS3_k127_4203465_11 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000000000000000000000002454 221.0
CMS3_k127_4203465_12 PFAM Cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000177 206.0
CMS3_k127_4203465_13 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000000000000000000000000000003874 148.0
CMS3_k127_4203465_14 - - - - 0.00000000000000000000003372 100.0
CMS3_k127_4203465_15 SCO1/SenC K07152 - - 0.0002915 50.0
CMS3_k127_4203465_2 PFAM Polysulphide reductase, NrfD K00185 - - 6.699e-254 788.0
CMS3_k127_4203465_3 Quinol cytochrome c oxidoreductase - - - 1.728e-202 638.0
CMS3_k127_4203465_4 PFAM Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 491.0
CMS3_k127_4203465_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 447.0
CMS3_k127_4203465_6 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 407.0
CMS3_k127_4203465_7 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 397.0
CMS3_k127_4203465_8 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 314.0
CMS3_k127_4203465_9 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 293.0
CMS3_k127_4266623_0 peptidase M1 - - - 7.834e-236 742.0
CMS3_k127_4266623_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002587 273.0
CMS3_k127_4266623_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000007646 252.0
CMS3_k127_4266623_3 PQQ-like domain - - - 0.000000000000000000000000000000001652 149.0
CMS3_k127_4266623_4 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000009692 135.0
CMS3_k127_426845_0 FtsX-like permease family K02004 - - 0.0 1070.0
CMS3_k127_426845_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.047e-321 992.0
CMS3_k127_426845_10 - - - - 0.00000000000000000000000000000000000000000000000000000001267 199.0
CMS3_k127_426845_11 TIGRFAM comF family protein K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000001216 195.0
CMS3_k127_426845_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000005053 179.0
CMS3_k127_426845_13 Protein of unknown function (DUF3575) - - - 0.0000000000000000000000000000000000000000000006607 171.0
CMS3_k127_426845_14 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000000000000000000000002005 168.0
CMS3_k127_426845_15 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000002449 151.0
CMS3_k127_426845_16 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000002008 124.0
CMS3_k127_426845_17 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000005858 114.0
CMS3_k127_426845_18 - - - - 0.000000000237 66.0
CMS3_k127_426845_2 nuclear chromosome segregation - - - 2.59e-283 907.0
CMS3_k127_426845_3 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 1.864e-218 683.0
CMS3_k127_426845_4 Tetratricopeptide repeat - - - 2.497e-201 647.0
CMS3_k127_426845_5 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 479.0
CMS3_k127_426845_6 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 384.0
CMS3_k127_426845_7 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003778 261.0
CMS3_k127_426845_8 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002297 265.0
CMS3_k127_426845_9 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000005071 212.0
CMS3_k127_4283399_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8e-323 999.0
CMS3_k127_4283399_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 1.246e-223 700.0
CMS3_k127_4283399_10 Involved in the tonB-independent uptake of proteins K13669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 419.0
CMS3_k127_4283399_11 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 402.0
CMS3_k127_4283399_12 Two component regulator three Y - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 415.0
CMS3_k127_4283399_13 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 379.0
CMS3_k127_4283399_14 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 374.0
CMS3_k127_4283399_15 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 375.0
CMS3_k127_4283399_16 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 338.0
CMS3_k127_4283399_17 PFAM Amidohydrolase 2 K07046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 326.0
CMS3_k127_4283399_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 314.0
CMS3_k127_4283399_19 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002253 275.0
CMS3_k127_4283399_2 MacB-like periplasmic core domain K02004 - - 2.007e-219 706.0
CMS3_k127_4283399_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000596 273.0
CMS3_k127_4283399_21 Alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009993 257.0
CMS3_k127_4283399_22 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001253 246.0
CMS3_k127_4283399_23 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000002234 242.0
CMS3_k127_4283399_24 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000003103 227.0
CMS3_k127_4283399_25 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000003537 227.0
CMS3_k127_4283399_26 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000001556 226.0
CMS3_k127_4283399_27 Diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000002503 222.0
CMS3_k127_4283399_28 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000004904 202.0
CMS3_k127_4283399_29 L-rhamnose mutarotase K03534 - 5.1.3.32 0.00000000000000000000000000000000000000000000000001238 181.0
CMS3_k127_4283399_3 Malate/L-lactate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000478 534.0
CMS3_k127_4283399_30 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000007034 162.0
CMS3_k127_4283399_32 S23 ribosomal protein - - - 0.000000000000000000000000000000000004864 140.0
CMS3_k127_4283399_33 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001123 147.0
CMS3_k127_4283399_34 methylamine metabolic process K15977 - - 0.00000000000000000000000000000001352 130.0
CMS3_k127_4283399_35 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000002812 116.0
CMS3_k127_4283399_37 ketosteroid isomerase - - - 0.000000000000000000000001602 108.0
CMS3_k127_4283399_38 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000003018 102.0
CMS3_k127_4283399_39 YceI-like domain - - - 0.00000000000000000000003237 107.0
CMS3_k127_4283399_4 PFAM Major Facilitator Superfamily K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 535.0
CMS3_k127_4283399_41 - - - - 0.00000000000000007214 91.0
CMS3_k127_4283399_42 - - - - 0.000000001364 62.0
CMS3_k127_4283399_43 Tetratricopeptide repeat - - - 0.00000001012 63.0
CMS3_k127_4283399_5 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 461.0
CMS3_k127_4283399_6 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 437.0
CMS3_k127_4283399_7 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 430.0
CMS3_k127_4283399_8 PFAM Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 419.0
CMS3_k127_4283399_9 Short-chain dehydrogenase reductase sdr K00059,K18333 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 404.0
CMS3_k127_4365170_0 ABC-2 type transporter - - - 0.0 1260.0
CMS3_k127_4365170_1 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 0.0 1019.0
CMS3_k127_4365170_10 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 286.0
CMS3_k127_4365170_11 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001097 280.0
CMS3_k127_4365170_12 PFAM DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000017 223.0
CMS3_k127_4365170_13 TIGRFAM Gliding motility-associated protein, GldC - - - 0.000000000000000000000000000000000000000000002064 166.0
CMS3_k127_4365170_15 Protein of unknown function (DUF3098) - - - 0.0000000000000000000213 92.0
CMS3_k127_4365170_2 Carboxypeptidase regulatory-like domain - - - 1.446e-257 824.0
CMS3_k127_4365170_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 430.0
CMS3_k127_4365170_4 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 422.0
CMS3_k127_4365170_5 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01029,K01032 - 2.8.3.5,2.8.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 372.0
CMS3_k127_4365170_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 344.0
CMS3_k127_4365170_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 332.0
CMS3_k127_4365170_8 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 308.0
CMS3_k127_4365170_9 GDSL family lipolytic protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 316.0
CMS3_k127_43747_0 Beta-eliminating lyase - - - 4.401e-228 713.0
CMS3_k127_43747_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 554.0
CMS3_k127_43747_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 459.0
CMS3_k127_43747_3 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000001339 196.0
CMS3_k127_43747_4 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000001406 157.0
CMS3_k127_43747_5 Aspartyl/Asparaginyl beta-hydroxylase K00476,K12979 - 1.14.11.16 0.000000000000000000000000000000004306 137.0
CMS3_k127_43747_6 PFAM DinB family protein - - - 0.00000000000000000000000000000001785 133.0
CMS3_k127_43747_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001662 133.0
CMS3_k127_43747_8 Belongs to the ompA family - - - 0.00000000000000008689 80.0
CMS3_k127_43747_9 Restriction endonuclease K07448 - - 0.000001063 55.0
CMS3_k127_4453065_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1560.0
CMS3_k127_4453065_1 PFAM Cytochrome c assembly protein K02198 - - 0.0 1087.0
CMS3_k127_4453065_10 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 543.0
CMS3_k127_4453065_11 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 538.0
CMS3_k127_4453065_12 PFAM aminotransferase class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008309 529.0
CMS3_k127_4453065_13 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 524.0
CMS3_k127_4453065_14 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 520.0
CMS3_k127_4453065_15 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 528.0
CMS3_k127_4453065_16 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 518.0
CMS3_k127_4453065_17 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 512.0
CMS3_k127_4453065_18 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009394 504.0
CMS3_k127_4453065_19 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 501.0
CMS3_k127_4453065_2 COGs COG1033 exporter of the RND superfamily protein K07003 - - 6.412e-316 985.0
CMS3_k127_4453065_20 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 499.0
CMS3_k127_4453065_21 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 478.0
CMS3_k127_4453065_22 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 471.0
CMS3_k127_4453065_23 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 437.0
CMS3_k127_4453065_24 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 415.0
CMS3_k127_4453065_25 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 417.0
CMS3_k127_4453065_26 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 391.0
CMS3_k127_4453065_27 photoreceptor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 393.0
CMS3_k127_4453065_28 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 377.0
CMS3_k127_4453065_29 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 366.0
CMS3_k127_4453065_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.63e-283 876.0
CMS3_k127_4453065_30 PFAM Glycosyl transferase family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 354.0
CMS3_k127_4453065_31 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 342.0
CMS3_k127_4453065_32 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 314.0
CMS3_k127_4453065_33 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 317.0
CMS3_k127_4453065_34 PFAM Cytochrome c assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 310.0
CMS3_k127_4453065_35 Scramblase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 299.0
CMS3_k127_4453065_36 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 295.0
CMS3_k127_4453065_37 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 284.0
CMS3_k127_4453065_38 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008388 265.0
CMS3_k127_4453065_39 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005327 252.0
CMS3_k127_4453065_4 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 1.877e-266 827.0
CMS3_k127_4453065_40 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000257 250.0
CMS3_k127_4453065_41 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.00000000000000000000000000000000000000000000000000000000000003843 220.0
CMS3_k127_4453065_42 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000002 213.0
CMS3_k127_4453065_43 photoreceptor activity - - - 0.000000000000000000000000000000000000000000000000000000000005256 225.0
CMS3_k127_4453065_44 ATPase kinase involved in NAD metabolism - - - 0.000000000000000000000000000000000000000000000000000004591 194.0
CMS3_k127_4453065_45 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000003651 181.0
CMS3_k127_4453065_46 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000003646 175.0
CMS3_k127_4453065_47 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000003501 171.0
CMS3_k127_4453065_48 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000000000000001206 154.0
CMS3_k127_4453065_49 Methyltransferase domain - - - 0.0000000000000000000000000000000000000465 151.0
CMS3_k127_4453065_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.579e-251 780.0
CMS3_k127_4453065_50 amine dehydrogenase activity - - - 0.00000000000000000000000000000000003044 156.0
CMS3_k127_4453065_51 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000002701 131.0
CMS3_k127_4453065_52 metal cluster binding - - - 0.00000000000000000000000000000003027 133.0
CMS3_k127_4453065_53 - - - - 0.00000000000000000000000000005991 126.0
CMS3_k127_4453065_54 glyoxalase III activity - - - 0.0000000000000000000002499 102.0
CMS3_k127_4453065_55 - - - - 0.000000000000000000001802 95.0
CMS3_k127_4453065_56 nitrite reductase [NAD(P)H] activity - - - 0.0000000000000000001225 94.0
CMS3_k127_4453065_57 Belongs to the ompA family K03286 - - 0.0000000000000001038 94.0
CMS3_k127_4453065_58 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000001747 74.0
CMS3_k127_4453065_59 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000003345 79.0
CMS3_k127_4453065_6 PFAM Stage II sporulation protein E (SpoIIE) - - - 9.189e-246 776.0
CMS3_k127_4453065_60 SdpI/YhfL protein family - - - 0.00000000001305 69.0
CMS3_k127_4453065_61 - - - - 0.00000000004487 65.0
CMS3_k127_4453065_62 - - - - 0.000000003728 63.0
CMS3_k127_4453065_7 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 1.644e-216 680.0
CMS3_k127_4453065_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 5.043e-199 626.0
CMS3_k127_4453065_9 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 570.0
CMS3_k127_4490722_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1380.0
CMS3_k127_4490722_1 Tetratricopeptide repeat - - - 1.393e-258 811.0
CMS3_k127_4490722_2 PFAM MgsA AAA ATPase C terminal K07478 - - 6.206e-207 650.0
CMS3_k127_4490722_3 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 559.0
CMS3_k127_4490722_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 458.0
CMS3_k127_4490722_5 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001689 290.0
CMS3_k127_4490722_6 PFAM WbqC-like protein family - - - 0.000000000000000000000000000000000000000000000000000008293 196.0
CMS3_k127_4490722_7 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000001202 169.0
CMS3_k127_4490722_8 - - - - 0.0000000000000000000000000000000000000002073 153.0
CMS3_k127_4490722_9 Belongs to the SUA5 family - - - 0.00000003474 55.0
CMS3_k127_4533591_0 TonB-dependent Receptor Plug Domain - - - 0.0 1298.0
CMS3_k127_4533591_1 Starch-binding associating with outer membrane - - - 7.263e-194 618.0
CMS3_k127_4533591_2 MORN repeat - - - 0.0000000000000000000000000000000000000000000000000000000000176 218.0
CMS3_k127_4533591_3 Domain of unknown function (DUF4361) - - - 0.00000000000000000000000000000000000000000000000001824 190.0
CMS3_k127_4533591_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000005194 148.0
CMS3_k127_4533591_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000001477 140.0
CMS3_k127_4533591_6 lactoylglutathione lyase activity - - - 0.0000000000000000000009418 105.0
CMS3_k127_4533591_7 peptidase activity - - - 0.000000000000000009541 91.0
CMS3_k127_4533591_8 - - - - 0.000009668 53.0
CMS3_k127_4534893_0 ABC-2 type transporter K21397 - - 0.0 1442.0
CMS3_k127_4534893_1 Sigma factor PP2C-like phosphatases - - - 0.0 1409.0
CMS3_k127_4534893_10 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 313.0
CMS3_k127_4534893_11 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 312.0
CMS3_k127_4534893_12 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 323.0
CMS3_k127_4534893_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009749 261.0
CMS3_k127_4534893_14 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000007741 244.0
CMS3_k127_4534893_15 PFAM MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000008681 236.0
CMS3_k127_4534893_16 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000000000000000000000000000000002296 227.0
CMS3_k127_4534893_17 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000002375 211.0
CMS3_k127_4534893_18 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000001107 164.0
CMS3_k127_4534893_19 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.00000000000000000000000000000000001303 140.0
CMS3_k127_4534893_2 Belongs to the UPF0753 family K09822 - - 0.0 1164.0
CMS3_k127_4534893_20 GAF domain - - - 0.00000000000000000000000000001753 127.0
CMS3_k127_4534893_21 secondary active sulfate transmembrane transporter activity - - - 0.0000000000002954 83.0
CMS3_k127_4534893_22 phosphate-selective porin O and P - - - 0.000000002291 59.0
CMS3_k127_4534893_23 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000003205 56.0
CMS3_k127_4534893_3 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 7.172e-299 926.0
CMS3_k127_4534893_4 COG0659 Sulfate permease and related transporters (MFS superfamily) - - - 9.287e-205 659.0
CMS3_k127_4534893_5 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 533.0
CMS3_k127_4534893_6 Tyrosine recombinase XerC K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 457.0
CMS3_k127_4534893_7 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 443.0
CMS3_k127_4534893_8 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 427.0
CMS3_k127_4534893_9 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 395.0
CMS3_k127_4553310_0 TonB dependent receptor - - - 3.087e-267 851.0
CMS3_k127_4553310_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 619.0
CMS3_k127_4553310_2 Major facilitator superfamily - - - 6.251e-197 627.0
CMS3_k127_4553310_3 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000006314 187.0
CMS3_k127_4553310_4 Transmembrane family 220, helix - - - 0.00000000000000000001591 96.0
CMS3_k127_4553310_5 Belongs to the ompA family - - - 0.0000000003541 68.0
CMS3_k127_4571113_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 3.578e-220 692.0
CMS3_k127_4571113_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 624.0
CMS3_k127_4571113_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 374.0
CMS3_k127_4669877_0 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 581.0
CMS3_k127_4669877_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 318.0
CMS3_k127_4669877_2 PFAM LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003806 270.0
CMS3_k127_4669877_3 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000004018 221.0
CMS3_k127_4669877_5 metallopeptidase activity K01337 - 3.4.21.50 0.000000000000000000007122 96.0
CMS3_k127_4711113_0 Caspase domain - - - 0.0 1027.0
CMS3_k127_4711113_1 DoxX family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 463.0
CMS3_k127_4711113_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 341.0
CMS3_k127_4711113_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 331.0
CMS3_k127_4711113_4 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 321.0
CMS3_k127_4711113_5 Domain of Unknown Function (DUF1599) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006191 261.0
CMS3_k127_4711113_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000003925 142.0
CMS3_k127_4711113_7 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000003428 130.0
CMS3_k127_472665_0 SnoaL-like domain - - - 2.165e-276 886.0
CMS3_k127_472665_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000003992 205.0
CMS3_k127_4787374_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - - 0.0 1069.0
CMS3_k127_4787374_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 545.0
CMS3_k127_4787374_10 Beta-lactamase - - - 0.00000000000000007664 89.0
CMS3_k127_4787374_11 helix_turn_helix, arabinose operon control protein - - - 0.0000000000001724 81.0
CMS3_k127_4787374_12 Belongs to the 'phage' integrase family - - - 0.00002435 51.0
CMS3_k127_4787374_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 421.0
CMS3_k127_4787374_3 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 351.0
CMS3_k127_4787374_4 CobW/HypB/UreG, nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001068 279.0
CMS3_k127_4787374_5 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000008366 190.0
CMS3_k127_4787374_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000003366 173.0
CMS3_k127_4787374_7 Peptidase, S41 - - - 0.000000000000000000000000000000000000002875 167.0
CMS3_k127_4787374_8 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000004559 132.0
CMS3_k127_4787374_9 Cytochrome c - - - 0.00000000000000000004591 95.0
CMS3_k127_4792998_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1203.0
CMS3_k127_4792998_1 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002113 235.0
CMS3_k127_4799932_0 Cys/Met metabolism PLP-dependent enzyme K10907,K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 454.0
CMS3_k127_4799932_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000005257 219.0
CMS3_k127_481912_0 B12 binding domain K00548 - 2.1.1.13 0.0 1289.0
CMS3_k127_481912_1 FtsX-like permease family - - - 0.0 1061.0
CMS3_k127_481912_10 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000002484 204.0
CMS3_k127_481912_11 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000000000000006726 162.0
CMS3_k127_481912_12 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000000002705 154.0
CMS3_k127_481912_2 Peptidase S9 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.288e-287 894.0
CMS3_k127_481912_3 MacB-like periplasmic core domain K02004 - - 5.509e-273 861.0
CMS3_k127_481912_4 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 526.0
CMS3_k127_481912_5 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 506.0
CMS3_k127_481912_6 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 502.0
CMS3_k127_481912_7 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 497.0
CMS3_k127_481912_8 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 441.0
CMS3_k127_481912_9 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000002114 229.0
CMS3_k127_4840079_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 574.0
CMS3_k127_4840079_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 306.0
CMS3_k127_4840079_2 tetratricopeptide repeat - - - 0.0000000000000000000000000000000745 134.0
CMS3_k127_4867552_0 Superfamily I DNA and RNA - - - 0.0 1421.0
CMS3_k127_4867552_1 TonB dependent receptor - - - 0.0 1162.0
CMS3_k127_4867552_10 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 464.0
CMS3_k127_4867552_11 S1 P1 nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 319.0
CMS3_k127_4867552_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006097 274.0
CMS3_k127_4867552_13 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004402 246.0
CMS3_k127_4867552_14 Helix-hairpin-helix motif - - - 0.00000000000000000000000000000000000000000000000000000009983 206.0
CMS3_k127_4867552_15 PLD-like domain K17717 - 3.1.4.4 0.000000000000000000000000000000000000000000000000001073 191.0
CMS3_k127_4867552_16 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000001925 190.0
CMS3_k127_4867552_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000007908 163.0
CMS3_k127_4867552_18 - - - - 0.00000000000005357 79.0
CMS3_k127_4867552_2 CarboxypepD_reg-like domain - - - 4.347e-311 983.0
CMS3_k127_4867552_3 Amidohydrolase family - - - 1.064e-277 860.0
CMS3_k127_4867552_4 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 582.0
CMS3_k127_4867552_5 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 574.0
CMS3_k127_4867552_6 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007088 548.0
CMS3_k127_4867552_7 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 507.0
CMS3_k127_4867552_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 491.0
CMS3_k127_4867552_9 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 465.0
CMS3_k127_4879697_0 sulfatase - - - 8.115e-214 681.0
CMS3_k127_4879697_1 Peptidase family M28 - - - 2.725e-212 673.0
CMS3_k127_4879697_2 Zinc carboxypeptidase - - - 6.075e-200 639.0
CMS3_k127_4879697_3 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 301.0
CMS3_k127_4879697_4 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002229 282.0
CMS3_k127_4879697_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007001 240.0
CMS3_k127_4879697_6 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000004388 190.0
CMS3_k127_4885850_0 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 543.0
CMS3_k127_4885850_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 568.0
CMS3_k127_4885850_10 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004874 277.0
CMS3_k127_4885850_11 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004379 270.0
CMS3_k127_4885850_12 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002796 269.0
CMS3_k127_4885850_13 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000002894 266.0
CMS3_k127_4885850_14 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001614 263.0
CMS3_k127_4885850_15 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004895 256.0
CMS3_k127_4885850_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005897 257.0
CMS3_k127_4885850_17 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000005666 237.0
CMS3_k127_4885850_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003179 231.0
CMS3_k127_4885850_19 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000001244 205.0
CMS3_k127_4885850_2 Major facilitator superfamily K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 542.0
CMS3_k127_4885850_20 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000000000000002325 206.0
CMS3_k127_4885850_21 - - - - 0.00000000000000000000000000000000000000000000000000000003298 205.0
CMS3_k127_4885850_22 - - - - 0.000000000000000000000000000000000000000000000000000001367 200.0
CMS3_k127_4885850_23 PFAM YhhN-like protein - - - 0.0000000000000000000000000000000000000000000000000001499 193.0
CMS3_k127_4885850_24 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000000000000003681 194.0
CMS3_k127_4885850_25 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000000000000000000000000003598 183.0
CMS3_k127_4885850_26 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000002032 125.0
CMS3_k127_4885850_27 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000000000000000225 125.0
CMS3_k127_4885850_28 HEAT repeats - - - 0.00000000000000000000000008264 117.0
CMS3_k127_4885850_29 Protein of unknown function (DUF1493) - - - 0.0000000000000001988 83.0
CMS3_k127_4885850_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 526.0
CMS3_k127_4885850_30 - - - - 0.0000001982 60.0
CMS3_k127_4885850_31 alpha-L-arabinofuranosidase - - - 0.000001863 60.0
CMS3_k127_4885850_4 efflux protein, MATE family K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 531.0
CMS3_k127_4885850_5 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 496.0
CMS3_k127_4885850_6 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 431.0
CMS3_k127_4885850_7 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 401.0
CMS3_k127_4885850_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 329.0
CMS3_k127_4885850_9 TIGRFAM Na H antiporter NhaC K03315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 307.0
CMS3_k127_4894313_0 hydrolase, family 3 K05349 - 3.2.1.21 0.0 1027.0
CMS3_k127_4894313_1 Fumarate reductase flavoprotein C-term K00239,K00244,K00278 GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0022900,GO:0032991,GO:0044237,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803 1.3.5.1,1.3.5.4,1.4.3.16 1.058e-262 820.0
CMS3_k127_4894313_10 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 443.0
CMS3_k127_4894313_11 signal transduction protein with a C-terminal ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 455.0
CMS3_k127_4894313_12 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 412.0
CMS3_k127_4894313_13 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 374.0
CMS3_k127_4894313_14 Domain of unknown function (DUF4407) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 363.0
CMS3_k127_4894313_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
CMS3_k127_4894313_16 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 353.0
CMS3_k127_4894313_17 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 323.0
CMS3_k127_4894313_18 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 303.0
CMS3_k127_4894313_19 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001666 280.0
CMS3_k127_4894313_2 mercury ion transmembrane transporter activity K01533,K17686 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 2.761e-224 721.0
CMS3_k127_4894313_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000007542 251.0
CMS3_k127_4894313_21 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000005518 226.0
CMS3_k127_4894313_22 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000006243 218.0
CMS3_k127_4894313_23 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000002382 220.0
CMS3_k127_4894313_24 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000005083 205.0
CMS3_k127_4894313_25 methyltransferase - - - 0.0000000000000000000000000000000000000002408 158.0
CMS3_k127_4894313_26 - - - - 0.00000000000000000000000000000000000007276 147.0
CMS3_k127_4894313_27 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000001187 145.0
CMS3_k127_4894313_28 Cytochrome c - - - 0.00000000000000000000000000000000001438 138.0
CMS3_k127_4894313_29 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000001203 128.0
CMS3_k127_4894313_3 F5 8 type C domain protein K01206 - 3.2.1.51 4.038e-215 678.0
CMS3_k127_4894313_30 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00246 - - 0.0000000000000000000000007823 108.0
CMS3_k127_4894313_31 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00247 - - 0.000000000000000000001381 100.0
CMS3_k127_4894313_32 - - - - 0.00000000000000000004591 95.0
CMS3_k127_4894313_33 Cytochrome oxidase maturation protein - - - 0.000000002131 61.0
CMS3_k127_4894313_35 - - - - 0.00007426 52.0
CMS3_k127_4894313_4 PFAM Polysulphide reductase, NrfD K00185 - - 1.289e-203 641.0
CMS3_k127_4894313_5 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 593.0
CMS3_k127_4894313_6 Peptidase M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 601.0
CMS3_k127_4894313_7 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 582.0
CMS3_k127_4894313_8 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 559.0
CMS3_k127_4894313_9 Aldehyde dehydrogenase K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 545.0
CMS3_k127_4906255_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1740.0
CMS3_k127_4906255_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 0.0 1595.0
CMS3_k127_4906255_2 Pkd domain containing protein - - - 5.819e-248 798.0
CMS3_k127_4906255_3 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 599.0
CMS3_k127_4906255_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 517.0
CMS3_k127_4906255_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 307.0
CMS3_k127_4906255_6 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002066 295.0
CMS3_k127_4906255_7 - - - - 0.0000000000000000000000000001623 121.0
CMS3_k127_4906255_8 Methyltransferase domain - - - 0.000000000000000000000000188 110.0
CMS3_k127_4906255_9 - - - - 0.0000000000000000000000002157 109.0
CMS3_k127_4927631_0 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000176 257.0
CMS3_k127_4927631_1 ftsk spoiiie - - - 0.0001017 56.0
CMS3_k127_4930775_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 480.0
CMS3_k127_4930775_1 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002266 267.0
CMS3_k127_4931997_0 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.0 1382.0
CMS3_k127_4931997_1 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1276.0
CMS3_k127_4931997_10 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 447.0
CMS3_k127_4931997_11 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 344.0
CMS3_k127_4931997_12 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001727 259.0
CMS3_k127_4931997_13 Alpha-L-arabinofuranosidase C-terminus - - - 0.000000000000000000000000000000000001431 142.0
CMS3_k127_4931997_14 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 0.000000000001938 68.0
CMS3_k127_4931997_2 F5 8 type C domain - - - 2.272e-265 827.0
CMS3_k127_4931997_3 Belongs to the glycosyl hydrolase 43 family - - - 4.663e-256 799.0
CMS3_k127_4931997_4 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 3.461e-252 787.0
CMS3_k127_4931997_5 beta-galactosidase activity K05970 - 3.1.1.53 4.128e-237 749.0
CMS3_k127_4931997_6 PFAM glycoside hydrolase - - - 2.547e-235 744.0
CMS3_k127_4931997_7 Putative esterase K07214 - - 6.154e-196 616.0
CMS3_k127_4931997_8 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 583.0
CMS3_k127_4931997_9 InterPro IPR005181 K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 541.0
CMS3_k127_4944854_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006896 286.0
CMS3_k127_4944854_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000002459 216.0
CMS3_k127_4944854_2 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000005926 154.0
CMS3_k127_4944854_3 Thioredoxin-like - - - 0.00000000000002667 84.0
CMS3_k127_4983590_0 COG3547 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 354.0
CMS3_k127_4983590_1 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 362.0
CMS3_k127_5024787_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 435.0
CMS3_k127_5024787_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000005726 221.0
CMS3_k127_5024787_2 LPP20 lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000001462 228.0
CMS3_k127_5024787_3 - - - - 0.00000000000000000000000000000000000003554 146.0
CMS3_k127_5030796_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.119e-221 693.0
CMS3_k127_5030796_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 402.0
CMS3_k127_5030796_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000001374 164.0
CMS3_k127_5030796_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000057 141.0
CMS3_k127_5030796_12 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000009409 130.0
CMS3_k127_5030796_13 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000007089 84.0
CMS3_k127_5030796_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000004927 74.0
CMS3_k127_5030796_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 322.0
CMS3_k127_5030796_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 319.0
CMS3_k127_5030796_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 312.0
CMS3_k127_5030796_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000944 269.0
CMS3_k127_5030796_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000294 221.0
CMS3_k127_5030796_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001966 213.0
CMS3_k127_5030796_8 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003799 203.0
CMS3_k127_5030796_9 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000005875 201.0
CMS3_k127_5094159_0 - - - - 2.414e-222 694.0
CMS3_k127_5094159_1 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 536.0
CMS3_k127_5094159_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 492.0
CMS3_k127_5094159_3 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
CMS3_k127_5094159_4 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 329.0
CMS3_k127_5094159_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 316.0
CMS3_k127_5094159_6 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 306.0
CMS3_k127_5094159_7 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006532 278.0
CMS3_k127_5094159_8 Resolvase - - - 0.00003602 48.0
CMS3_k127_5145923_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 497.0
CMS3_k127_5145923_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000006092 165.0
CMS3_k127_5166370_0 Amidohydrolase family - - - 0.0 1609.0
CMS3_k127_5166370_1 PFAM TonB-dependent Receptor Plug - - - 5e-324 1020.0
CMS3_k127_5166370_10 7TMR-DISM extracellular 2 K20971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 597.0
CMS3_k127_5166370_11 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 573.0
CMS3_k127_5166370_12 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 561.0
CMS3_k127_5166370_13 Sugar nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 540.0
CMS3_k127_5166370_14 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 540.0
CMS3_k127_5166370_15 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 524.0
CMS3_k127_5166370_16 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 525.0
CMS3_k127_5166370_17 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 470.0
CMS3_k127_5166370_18 Sulfatase-modifying factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 414.0
CMS3_k127_5166370_19 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 404.0
CMS3_k127_5166370_2 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 3.135e-318 989.0
CMS3_k127_5166370_20 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 391.0
CMS3_k127_5166370_21 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 384.0
CMS3_k127_5166370_22 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 357.0
CMS3_k127_5166370_23 Bacterial transferase hexapeptide (six repeats) K18234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 334.0
CMS3_k127_5166370_24 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 336.0
CMS3_k127_5166370_25 ABC transporter transmembrane region K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 297.0
CMS3_k127_5166370_26 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 274.0
CMS3_k127_5166370_27 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000002707 205.0
CMS3_k127_5166370_28 KR domain K00038 - 1.1.1.53 0.00000000000000000000000000000000000000000000000000002039 197.0
CMS3_k127_5166370_29 Alkylphosphonate utilization operon protein phna K06193 - - 0.000000000000000000000000000000000000000000000000006899 182.0
CMS3_k127_5166370_3 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 4.069e-267 828.0
CMS3_k127_5166370_30 protein histidine kinase activity K02029,K02030,K02489,K07679 - 2.7.13.3 0.00000000000000000000000000000000000000001056 169.0
CMS3_k127_5166370_31 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001192 151.0
CMS3_k127_5166370_32 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000000001935 147.0
CMS3_k127_5166370_33 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000006868 142.0
CMS3_k127_5166370_34 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000001082 135.0
CMS3_k127_5166370_35 Dienelactone hydrolase family - - - 0.0000000000000000000004705 105.0
CMS3_k127_5166370_36 CHASE2 domain - - - 0.0000000002404 72.0
CMS3_k127_5166370_37 - - - - 0.000007489 54.0
CMS3_k127_5166370_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.839e-257 803.0
CMS3_k127_5166370_5 protein conserved in bacteria - - - 1.04e-223 700.0
CMS3_k127_5166370_6 - - - - 8.374e-219 688.0
CMS3_k127_5166370_7 - - - - 3.146e-205 654.0
CMS3_k127_5166370_8 Pfam Oxidoreductase family, C-terminal alpha beta domain - - - 5.229e-205 646.0
CMS3_k127_5166370_9 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 618.0
CMS3_k127_5205817_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1005.0
CMS3_k127_5205817_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 559.0
CMS3_k127_5205817_10 Protein of unknown function (DUF1616) - - - 0.000000000000000000000000000000000002665 145.0
CMS3_k127_5205817_11 - - - - 0.0000000007017 65.0
CMS3_k127_5205817_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 447.0
CMS3_k127_5205817_3 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 434.0
CMS3_k127_5205817_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 423.0
CMS3_k127_5205817_5 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 366.0
CMS3_k127_5205817_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 315.0
CMS3_k127_5205817_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000007067 234.0
CMS3_k127_5205817_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000001168 179.0
CMS3_k127_5205817_9 PadR family transcriptional regulator - - - 0.000000000000000000000000000000000002553 141.0
CMS3_k127_5207498_0 TonB-dependent Receptor Plug Domain - - - 0.0 1107.0
CMS3_k127_5207498_1 PFAM TonB-dependent Receptor Plug - - - 6.904e-311 977.0
CMS3_k127_5207498_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 358.0
CMS3_k127_5207498_11 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
CMS3_k127_5207498_12 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001897 254.0
CMS3_k127_5207498_13 Amino-transferase class IV K02619 - 4.1.3.38 0.00000000000000000000000000001246 121.0
CMS3_k127_5207498_14 - - - - 0.00000000000000000000000003338 117.0
CMS3_k127_5207498_15 - - - - 0.0000000000000308 79.0
CMS3_k127_5207498_16 - - - - 0.0003189 51.0
CMS3_k127_5207498_2 TonB dependent receptor - - - 1.747e-305 966.0
CMS3_k127_5207498_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.135e-218 683.0
CMS3_k127_5207498_4 Belongs to the ompA family - - - 3.015e-217 691.0
CMS3_k127_5207498_5 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 595.0
CMS3_k127_5207498_6 Pfam:SusD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 502.0
CMS3_k127_5207498_7 Trigger factor K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 493.0
CMS3_k127_5207498_8 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 434.0
CMS3_k127_5207498_9 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
CMS3_k127_5224583_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.064e-259 808.0
CMS3_k127_5224583_1 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 592.0
CMS3_k127_5224583_11 - - - - 0.000003752 49.0
CMS3_k127_5224583_2 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 488.0
CMS3_k127_5224583_3 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 458.0
CMS3_k127_5224583_4 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 386.0
CMS3_k127_5224583_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 342.0
CMS3_k127_5224583_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000863 262.0
CMS3_k127_5224583_7 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001175 267.0
CMS3_k127_5224583_8 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000001085 139.0
CMS3_k127_5224583_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000002202 124.0
CMS3_k127_523395_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1105.0
CMS3_k127_523395_1 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 481.0
CMS3_k127_523395_2 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 454.0
CMS3_k127_523395_3 Domain of unknown function (DUF368) K08974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 383.0
CMS3_k127_523395_4 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000001543 267.0
CMS3_k127_523395_5 - - - - 0.00000000001233 70.0
CMS3_k127_5234862_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 6.845e-239 747.0
CMS3_k127_5234862_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 3.458e-194 616.0
CMS3_k127_5234862_2 Universal stress protein family - - - 0.000000000000001973 79.0
CMS3_k127_5245560_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.0 1110.0
CMS3_k127_5245560_1 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 477.0
CMS3_k127_5245560_10 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005519 257.0
CMS3_k127_5245560_11 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001015 229.0
CMS3_k127_5245560_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000427 236.0
CMS3_k127_5245560_13 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000007236 187.0
CMS3_k127_5245560_15 Tfp pilus assembly protein FimV - - - 0.0000000000000000003175 94.0
CMS3_k127_5245560_2 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 486.0
CMS3_k127_5245560_3 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 471.0
CMS3_k127_5245560_4 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 452.0
CMS3_k127_5245560_5 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 434.0
CMS3_k127_5245560_6 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 379.0
CMS3_k127_5245560_7 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 313.0
CMS3_k127_5245560_8 PFAM O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 304.0
CMS3_k127_5245560_9 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002241 258.0
CMS3_k127_5258776_0 Protein of unknown function (DUF1549) - - - 0.0 1174.0
CMS3_k127_5258776_1 Outer membrane receptor - - - 0.0 1120.0
CMS3_k127_5258776_10 zinc D-Ala-D-Ala carboxypeptidase activity K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 355.0
CMS3_k127_5258776_11 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 309.0
CMS3_k127_5258776_12 PFAM Short-chain dehydrogenase reductase SDR K00059,K07535 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000006207 256.0
CMS3_k127_5258776_13 beta-fructofuranosidase activity - - - 0.00000000000000000000000001516 123.0
CMS3_k127_5258776_14 beta-fructofuranosidase activity - - - 0.00000000000000000000002562 113.0
CMS3_k127_5258776_15 TonB-dependent Receptor Plug K21573 - - 0.00001277 59.0
CMS3_k127_5258776_2 Cytochrome c - - - 4.777e-319 1005.0
CMS3_k127_5258776_3 Protein of unknown function (DUF1501) - - - 2.172e-239 747.0
CMS3_k127_5258776_4 intracellular protein transport - - - 1.269e-195 645.0
CMS3_k127_5258776_5 NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 568.0
CMS3_k127_5258776_6 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 496.0
CMS3_k127_5258776_7 COG COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 432.0
CMS3_k127_5258776_8 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 423.0
CMS3_k127_5258776_9 Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 352.0
CMS3_k127_527036_0 Calcineurin-like phosphoesterase - - - 0.0 1218.0
CMS3_k127_527036_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 2.682e-247 769.0
CMS3_k127_527036_10 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000000000000000000000000000005706 219.0
CMS3_k127_527036_11 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000008845 191.0
CMS3_k127_527036_12 - - - - 0.00000000000000000000000000000000000000000000000001178 186.0
CMS3_k127_527036_13 Universal stress protein - - - 0.0000000000000000000000000000000000000000000002855 177.0
CMS3_k127_527036_14 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000004061 138.0
CMS3_k127_527036_15 - - - - 0.00000000000000000000000173 104.0
CMS3_k127_527036_17 - - - - 0.0005123 43.0
CMS3_k127_527036_2 RNA polymerase, sigma-54 factor K03092 - - 2.878e-218 685.0
CMS3_k127_527036_3 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 602.0
CMS3_k127_527036_4 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 406.0
CMS3_k127_527036_5 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 396.0
CMS3_k127_527036_6 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006168 273.0
CMS3_k127_527036_7 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001259 262.0
CMS3_k127_527036_8 (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001467 240.0
CMS3_k127_527036_9 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000008968 241.0
CMS3_k127_5338528_0 Belongs to the ribulokinase family K00853 - 2.7.1.16 1.934e-245 768.0
CMS3_k127_5338528_1 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 1.842e-225 708.0
CMS3_k127_5338528_10 DGC domain - - - 0.00000000000000000000000000000000000000000000001272 175.0
CMS3_k127_5338528_11 - - - - 0.00000000000000000000000000000000000000000000002301 174.0
CMS3_k127_5338528_12 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000003148 170.0
CMS3_k127_5338528_13 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000001247 137.0
CMS3_k127_5338528_14 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000001427 132.0
CMS3_k127_5338528_15 Protein of unknown function (DUF2892) - - - 0.00000000000001494 75.0
CMS3_k127_5338528_16 TIR domain - - - 0.00038 51.0
CMS3_k127_5338528_2 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 548.0
CMS3_k127_5338528_3 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 523.0
CMS3_k127_5338528_4 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 451.0
CMS3_k127_5338528_5 PFAM Class II Aldolase and Adducin N-terminal domain K03077 - 5.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 398.0
CMS3_k127_5338528_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 332.0
CMS3_k127_5338528_7 Major facilitator Superfamily K08222 - - 0.0000000000000000000000000000000000000000000000000000000000000363 218.0
CMS3_k127_5338528_8 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000001433 192.0
CMS3_k127_5338528_9 - - - - 0.00000000000000000000000000000000000000000000000001761 190.0
CMS3_k127_5343479_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004857 252.0
CMS3_k127_5343479_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000002081 239.0
CMS3_k127_5343479_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000001219 187.0
CMS3_k127_5343479_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000746 142.0
CMS3_k127_5351582_0 MacB-like periplasmic core domain - - - 1.472e-208 675.0
CMS3_k127_5351582_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.472e-198 641.0
CMS3_k127_5351582_2 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 378.0
CMS3_k127_5351582_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000004893 229.0
CMS3_k127_5351582_4 Mannose-6-phosphate isomerase - - - 0.00000000000000000000003507 99.0
CMS3_k127_5405245_0 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 586.0
CMS3_k127_5405245_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000468 246.0
CMS3_k127_5405245_2 - - - - 0.000000000000000000000000000000000000000000000000009647 188.0
CMS3_k127_5408255_0 COGs COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase K01811 - 3.2.1.177 0.0 1166.0
CMS3_k127_5408255_1 protein conserved in bacteria K09955 - - 0.0 1157.0
CMS3_k127_5408255_2 PQQ-like domain - - - 0.0 1076.0
CMS3_k127_5408255_3 COG NOG04001 non supervised orthologous group K15923 - 3.2.1.51 1.563e-317 992.0
CMS3_k127_5408255_4 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 484.0
CMS3_k127_5408255_5 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 320.0
CMS3_k127_5408255_6 Cupin domain - - - 0.000000000000000000000000000000000000005058 152.0
CMS3_k127_5446414_0 Beta-lactamase K01453 - 3.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000002469 273.0
CMS3_k127_5446414_1 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000007209 237.0
CMS3_k127_5446414_2 - - - - 0.0000000000000000003194 89.0
CMS3_k127_5743748_0 Motility related/secretion protein - - - 0.0 2689.0
CMS3_k127_5743748_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1452.0
CMS3_k127_5743748_10 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 522.0
CMS3_k127_5743748_11 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 511.0
CMS3_k127_5743748_12 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 495.0
CMS3_k127_5743748_13 PFAM Serine dehydratase alpha chain K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 462.0
CMS3_k127_5743748_14 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 472.0
CMS3_k127_5743748_15 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 448.0
CMS3_k127_5743748_16 PFAM M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 439.0
CMS3_k127_5743748_17 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 442.0
CMS3_k127_5743748_18 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 430.0
CMS3_k127_5743748_19 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 390.0
CMS3_k127_5743748_2 Phosphate acetyl butaryl transferase K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1136.0
CMS3_k127_5743748_20 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 360.0
CMS3_k127_5743748_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 351.0
CMS3_k127_5743748_22 Domain of unknown function (DUF4837) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 346.0
CMS3_k127_5743748_23 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 312.0
CMS3_k127_5743748_24 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000002753 267.0
CMS3_k127_5743748_25 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001916 243.0
CMS3_k127_5743748_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001086 243.0
CMS3_k127_5743748_27 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000002206 235.0
CMS3_k127_5743748_28 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000717 217.0
CMS3_k127_5743748_29 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000002278 221.0
CMS3_k127_5743748_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 4.757e-213 666.0
CMS3_k127_5743748_30 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000002467 196.0
CMS3_k127_5743748_31 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000005254 192.0
CMS3_k127_5743748_33 - - - - 0.000000000000000000000000000000000005281 141.0
CMS3_k127_5743748_34 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000000000000000000000001998 132.0
CMS3_k127_5743748_35 Protein of unknown function (DUF2911) - - - 0.000000000000000000001678 96.0
CMS3_k127_5743748_36 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000002653 91.0
CMS3_k127_5743748_37 Large extracellular alpha-helical protein - - - 0.00000000000000000002704 104.0
CMS3_k127_5743748_38 - - - - 0.00000000000001401 76.0
CMS3_k127_5743748_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.557e-195 619.0
CMS3_k127_5743748_5 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 587.0
CMS3_k127_5743748_6 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 570.0
CMS3_k127_5743748_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 556.0
CMS3_k127_5743748_8 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 555.0
CMS3_k127_5743748_9 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 525.0
CMS3_k127_576350_0 formate dehydrogenase (NAD+) activity K00123,K05299 - 1.17.1.10,1.17.1.9 0.0 1392.0
CMS3_k127_576350_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.341e-245 769.0
CMS3_k127_576350_2 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 496.0
CMS3_k127_576350_3 TIGRFAM TIGR02757 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 357.0
CMS3_k127_576350_4 Beta-lactamase - - - 0.000000000000000000000000000000001765 136.0
CMS3_k127_576350_5 - - - - 0.000000000000003307 83.0
CMS3_k127_5768846_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002624 238.0
CMS3_k127_5768846_1 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000009432 216.0
CMS3_k127_5768846_2 - - - - 0.000000001677 64.0
CMS3_k127_5773143_0 H( )-stimulated, divalent metal cation uptake system K03322 - - 1.045e-249 784.0
CMS3_k127_5773143_1 unfolded protein binding - - - 8.708e-195 614.0
CMS3_k127_5773143_10 yiaA/B two helix domain - - - 0.00000000000000000000000000000000000000000000000004733 179.0
CMS3_k127_5773143_11 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000132 153.0
CMS3_k127_5773143_12 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000003207 150.0
CMS3_k127_5773143_13 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000006671 127.0
CMS3_k127_5773143_2 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 554.0
CMS3_k127_5773143_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 485.0
CMS3_k127_5773143_4 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 443.0
CMS3_k127_5773143_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 410.0
CMS3_k127_5773143_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 419.0
CMS3_k127_5773143_7 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 323.0
CMS3_k127_5773143_8 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005402 266.0
CMS3_k127_5773143_9 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005869 244.0
CMS3_k127_5774256_0 Peptidase dimerization domain protein - - - 1.063e-205 651.0
CMS3_k127_5774256_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 522.0
CMS3_k127_5774256_10 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000001826 184.0
CMS3_k127_5774256_11 Globin - - - 0.00000000000000000000000000000000000003079 147.0
CMS3_k127_5774256_12 Globin - - - 0.00000000000000000000000000000000007861 137.0
CMS3_k127_5774256_14 - - - - 0.000000000000000000000005982 111.0
CMS3_k127_5774256_15 - - - - 0.000000000165 64.0
CMS3_k127_5774256_17 - - - - 0.0000006007 57.0
CMS3_k127_5774256_18 TIR domain - - - 0.000003034 60.0
CMS3_k127_5774256_19 Sensor histidine kinase response regulator Fos-1 K19692 GO:0000003,GO:0000156,GO:0000160,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009653,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019953,GO:0019954,GO:0022402,GO:0022413,GO:0022414,GO:0023052,GO:0030154,GO:0030435,GO:0030436,GO:0030437,GO:0032502,GO:0032505,GO:0034293,GO:0034305,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0043934,GO:0043935,GO:0043937,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044703,GO:0045595,GO:0048315,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051321,GO:0051704,GO:0051716,GO:0060089,GO:0060284,GO:0061794,GO:0065007,GO:0071704,GO:0075306,GO:0140096,GO:1901564,GO:1903046,GO:1903664 2.7.13.3 0.000003616 59.0
CMS3_k127_5774256_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 451.0
CMS3_k127_5774256_3 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 429.0
CMS3_k127_5774256_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 429.0
CMS3_k127_5774256_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000783 264.0
CMS3_k127_5774256_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000009287 268.0
CMS3_k127_5774256_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000497 243.0
CMS3_k127_5774256_8 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000006884 241.0
CMS3_k127_5774256_9 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03406 - - 0.000000000000000000000000000000000000000000000000000004952 203.0
CMS3_k127_5792319_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1615.0
CMS3_k127_5792319_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 440.0
CMS3_k127_5792319_11 amine dehydrogenase activity - - - 0.000000000000002217 83.0
CMS3_k127_5792319_12 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000742 72.0
CMS3_k127_5792319_13 - - - - 0.000000000002064 78.0
CMS3_k127_5792319_2 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 447.0
CMS3_k127_5792319_3 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 397.0
CMS3_k127_5792319_4 Low-potential electron donor to a number of redox enzymes K03839 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002326 244.0
CMS3_k127_5792319_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000276 214.0
CMS3_k127_5792319_6 Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000001828 213.0
CMS3_k127_5792319_7 GCN5 family acetyltransferase K03827 - - 0.00000000000000000000000000000000000000000000000000001964 191.0
CMS3_k127_5792319_8 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000006768 192.0
CMS3_k127_5792319_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000006976 121.0
CMS3_k127_5803827_0 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 482.0
CMS3_k127_5803827_1 electron transfer activity K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002016 252.0
CMS3_k127_5803827_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000009717 77.0
CMS3_k127_5803827_3 - - - - 0.000000004317 61.0
CMS3_k127_5818746_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1944.0
CMS3_k127_5818746_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.009e-198 626.0
CMS3_k127_5818746_10 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 355.0
CMS3_k127_5818746_11 N-acetylglucosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 331.0
CMS3_k127_5818746_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 302.0
CMS3_k127_5818746_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 295.0
CMS3_k127_5818746_14 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001196 271.0
CMS3_k127_5818746_15 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000003088 224.0
CMS3_k127_5818746_16 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000000000002784 222.0
CMS3_k127_5818746_17 PFAM SprT-like family - - - 0.0000000000000000000000000000000000000000000000006689 185.0
CMS3_k127_5818746_18 Cytochrome b5-like Heme/Steroid binding domain - - - 0.000000000000000000000000000000000001029 139.0
CMS3_k127_5818746_19 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.00000000000000000000000000000000000152 151.0
CMS3_k127_5818746_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 576.0
CMS3_k127_5818746_20 Domain of unknown function (DUF4129) - - - 0.00000000000000000000000000000001082 136.0
CMS3_k127_5818746_21 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000009637 130.0
CMS3_k127_5818746_22 PFAM Heavy-metal-associated domain - - - 0.00000000000000000001244 93.0
CMS3_k127_5818746_23 Protein of unknown function (DUF3347) - - - 0.000000000262 65.0
CMS3_k127_5818746_24 - - - - 0.0000000007142 65.0
CMS3_k127_5818746_25 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916,K15765 GO:0000041,GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009987,GO:0015669,GO:0015671,GO:0015893,GO:0016491,GO:0016645,GO:0016646,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0030001,GO:0033554,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042493,GO:0042737,GO:0043167,GO:0043168,GO:0044237,GO:0044248,GO:0044270,GO:0044464,GO:0046209,GO:0046210,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051213,GO:0051234,GO:0051409,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0071500,GO:0071949,GO:0072593,GO:0097159,GO:1901265,GO:1901363,GO:2001057 1.14.12.17,1.18.1.3 0.0003329 49.0
CMS3_k127_5818746_26 Bacterial extracellular solute-binding protein K02012 - - 0.0006341 44.0
CMS3_k127_5818746_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 548.0
CMS3_k127_5818746_4 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 524.0
CMS3_k127_5818746_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 458.0
CMS3_k127_5818746_6 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 409.0
CMS3_k127_5818746_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 381.0
CMS3_k127_5818746_8 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 368.0
CMS3_k127_5818746_9 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 364.0
CMS3_k127_5826277_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.159e-318 985.0
CMS3_k127_5826277_1 GH3 auxin-responsive promoter - - - 3.354e-261 812.0
CMS3_k127_5826277_10 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 349.0
CMS3_k127_5826277_11 Protein of unknown function (DUF3822) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 324.0
CMS3_k127_5826277_12 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 314.0
CMS3_k127_5826277_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004012 278.0
CMS3_k127_5826277_14 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003666 275.0
CMS3_k127_5826277_15 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002303 265.0
CMS3_k127_5826277_16 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000581 275.0
CMS3_k127_5826277_17 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007717 258.0
CMS3_k127_5826277_18 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000002833 231.0
CMS3_k127_5826277_19 RibD C-terminal domain K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000001571 224.0
CMS3_k127_5826277_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 1.229e-260 808.0
CMS3_k127_5826277_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000005859 220.0
CMS3_k127_5826277_21 - - - - 0.0000000000000000000000000000000000000000000000000000000001062 214.0
CMS3_k127_5826277_22 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000004023 217.0
CMS3_k127_5826277_23 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000003612 205.0
CMS3_k127_5826277_24 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000000000004994 199.0
CMS3_k127_5826277_25 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000001349 195.0
CMS3_k127_5826277_26 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.00000000000000000000000000000000000000000002752 169.0
CMS3_k127_5826277_27 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000001333 155.0
CMS3_k127_5826277_28 Nudix hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000004936 150.0
CMS3_k127_5826277_29 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000006063 143.0
CMS3_k127_5826277_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 3.106e-241 769.0
CMS3_k127_5826277_30 - - - - 0.00000000000000000000000000000000000265 149.0
CMS3_k127_5826277_31 OmpA family - - - 0.00000000000000000000000000000000475 132.0
CMS3_k127_5826277_32 small membrane protein - - - 0.000000000000000000000000000004424 123.0
CMS3_k127_5826277_33 Phosphoglycerate mutase family - - - 0.0000000000000000000000000001336 121.0
CMS3_k127_5826277_34 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000006583 115.0
CMS3_k127_5826277_35 B-1 B cell differentiation - - - 0.0000000000000000000001445 110.0
CMS3_k127_5826277_37 Hep Hag repeat protein - - - 0.0000000000000008906 91.0
CMS3_k127_5826277_38 Domain of unknown function (DUF4296) - - - 0.000000000000001083 82.0
CMS3_k127_5826277_39 - - - - 0.0000000000002908 72.0
CMS3_k127_5826277_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 527.0
CMS3_k127_5826277_40 Chaperone of endosialidase - - - 0.00000009809 64.0
CMS3_k127_5826277_5 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 530.0
CMS3_k127_5826277_6 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 520.0
CMS3_k127_5826277_7 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008511 448.0
CMS3_k127_5826277_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 436.0
CMS3_k127_5826277_9 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 393.0
CMS3_k127_5843985_0 cellulose binding - - - 0.0 1194.0
CMS3_k127_5843985_1 TonB dependent receptor - - - 1.175e-264 844.0
CMS3_k127_5843985_10 membrane K08994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 459.0
CMS3_k127_5843985_11 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 469.0
CMS3_k127_5843985_12 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 451.0
CMS3_k127_5843985_13 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 437.0
CMS3_k127_5843985_14 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 421.0
CMS3_k127_5843985_15 Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 400.0
CMS3_k127_5843985_16 PFAM fumarylacetoacetate (FAA) hydrolase K14259 - 4.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 344.0
CMS3_k127_5843985_17 TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009387 263.0
CMS3_k127_5843985_18 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001021 261.0
CMS3_k127_5843985_19 Putative rhamnosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001966 237.0
CMS3_k127_5843985_2 Peptidase dimerisation domain K12941 - - 1.539e-232 730.0
CMS3_k127_5843985_20 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000001934 203.0
CMS3_k127_5843985_21 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000003149 189.0
CMS3_k127_5843985_22 Ndr family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000001291 198.0
CMS3_k127_5843985_23 Transmembrane family 220, helix - - - 0.00000000000000000002361 95.0
CMS3_k127_5843985_24 Belongs to the ompA family - - - 0.00000003122 66.0
CMS3_k127_5843985_25 - - - - 0.00000004434 59.0
CMS3_k127_5843985_3 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 1.409e-199 634.0
CMS3_k127_5843985_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 5.445e-198 621.0
CMS3_k127_5843985_5 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 623.0
CMS3_k127_5843985_6 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 578.0
CMS3_k127_5843985_7 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 572.0
CMS3_k127_5843985_8 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 481.0
CMS3_k127_5843985_9 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 479.0
CMS3_k127_5919742_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 400.0
CMS3_k127_5919742_1 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003403 301.0
CMS3_k127_5919742_2 modification enzyme, MiaB family K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000006855 200.0
CMS3_k127_5919742_3 Serine threonine protein kinase - - - 0.000000000000000000071 94.0
CMS3_k127_5919742_4 TIR domain - - - 0.00000000000001578 83.0
CMS3_k127_5968507_0 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 309.0
CMS3_k127_5968507_1 - - - - 0.000000000000000000000000000000000000002841 149.0
CMS3_k127_5968507_2 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0005502 47.0
CMS3_k127_5980393_0 Cytochrome c - - - 0.0 1097.0
CMS3_k127_5980393_1 beta-fructofuranosidase activity - - - 0.000000000000000000000000006176 124.0
CMS3_k127_5980393_2 beta-fructofuranosidase activity - - - 0.00000000000000000000008335 111.0
CMS3_k127_5990070_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1156.0
CMS3_k127_5990070_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 3.146e-202 636.0
CMS3_k127_5990070_2 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001837 276.0
CMS3_k127_5990070_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000000000006941 150.0
CMS3_k127_5990070_4 Trigger factor K03545 - - 0.00000000007303 63.0
CMS3_k127_5990070_5 - - - - 0.0000000004695 60.0
CMS3_k127_5990638_0 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal K01684 - 4.2.1.6 1.81e-249 774.0
CMS3_k127_5990638_1 Aldehyde K13877,K14519 - 1.2.1.26,1.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 592.0
CMS3_k127_5990638_2 SPTR Demethylmenaquinone methyltransferase-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 537.0
CMS3_k127_5990638_3 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 361.0
CMS3_k127_5990638_4 PFAM Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003899 277.0
CMS3_k127_5990638_5 Sulfatase - - - 0.000000000000000000000000049 110.0
CMS3_k127_6004871_0 TonB dependent receptor - - - 1.471e-288 918.0
CMS3_k127_6004871_1 Concanavalin A-like lectin/glucanases superfamily - - - 1.54e-264 849.0
CMS3_k127_6004871_2 - - - - 2.454e-235 740.0
CMS3_k127_6004871_3 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 469.0
CMS3_k127_6004871_4 Major facilitator Superfamily K08222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 367.0
CMS3_k127_6004871_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000000000000001036 202.0
CMS3_k127_6004871_6 Transposase IS200 like - - - 0.0000000003064 61.0
CMS3_k127_6014190_0 PFAM Conserved region in glutamate synthase K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.7.1 0.0 1614.0
CMS3_k127_6014190_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.0 1037.0
CMS3_k127_6014190_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 300.0
CMS3_k127_6014190_11 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 294.0
CMS3_k127_6014190_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009796 281.0
CMS3_k127_6014190_13 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000245 276.0
CMS3_k127_6014190_14 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003155 273.0
CMS3_k127_6014190_15 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000001398 239.0
CMS3_k127_6014190_16 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000004248 238.0
CMS3_k127_6014190_17 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000005286 217.0
CMS3_k127_6014190_18 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000000000000000000000000009876 186.0
CMS3_k127_6014190_2 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.799e-206 652.0
CMS3_k127_6014190_20 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000002691 119.0
CMS3_k127_6014190_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000828 566.0
CMS3_k127_6014190_4 PFAM Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 567.0
CMS3_k127_6014190_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 536.0
CMS3_k127_6014190_6 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 522.0
CMS3_k127_6014190_7 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 519.0
CMS3_k127_6014190_8 Signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 498.0
CMS3_k127_6014190_9 PFAM BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 342.0
CMS3_k127_6021225_0 PFAM Elongation factor Tu domain 2 K06207 - - 1.298e-294 913.0
CMS3_k127_6021225_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 5.528e-257 799.0
CMS3_k127_6021225_10 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000003664 170.0
CMS3_k127_6021225_11 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000000001159 182.0
CMS3_k127_6021225_12 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000001293 148.0
CMS3_k127_6021225_13 InterPro IPR008538 - - - 0.000000000000000000000000000000000004141 143.0
CMS3_k127_6021225_14 OsmC-like protein K07397 - - 0.0000000000000000000000000000000001242 136.0
CMS3_k127_6021225_15 Belongs to the eIF-2B alpha beta delta subunits family - - - 0.000000000000000000000009068 111.0
CMS3_k127_6021225_16 Diguanylate cyclase - - - 0.000001646 61.0
CMS3_k127_6021225_17 MacB-like periplasmic core domain - - - 0.000003686 51.0
CMS3_k127_6021225_18 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.0004983 49.0
CMS3_k127_6021225_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 601.0
CMS3_k127_6021225_3 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 530.0
CMS3_k127_6021225_4 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 363.0
CMS3_k127_6021225_6 PFAM Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 329.0
CMS3_k127_6021225_7 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 296.0
CMS3_k127_6021225_8 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000256 263.0
CMS3_k127_6021225_9 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000001649 211.0
CMS3_k127_6030848_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1025.0
CMS3_k127_6030848_1 7TMR-DISM extracellular 2 K20971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 591.0
CMS3_k127_6030848_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001141 151.0
CMS3_k127_6061768_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 0.0 1247.0
CMS3_k127_6061768_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0 1064.0
CMS3_k127_6061768_10 membrane protein, hemolysin III homolog K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002626 263.0
CMS3_k127_6061768_11 subfamily IA, variant 3 with third motif having DD or ED - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001118 257.0
CMS3_k127_6061768_12 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000004114 224.0
CMS3_k127_6061768_13 - - - - 0.00000000000000000000000000000000000000000000000000000007307 198.0
CMS3_k127_6061768_14 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000008649 195.0
CMS3_k127_6061768_15 Predicted membrane protein (DUF2214) K08983 - - 0.000000000000000000000000000000000000000000000000005974 185.0
CMS3_k127_6061768_16 Putative lumazine-binding - - - 0.000000000000000000000000000000000000000001009 160.0
CMS3_k127_6061768_17 Belongs to the globin family K05916 - 1.14.12.17 0.00000000000000000000000000000000000000001096 157.0
CMS3_k127_6061768_18 Belongs to the globin family K05916 - 1.14.12.17 0.0000000000000000000002068 104.0
CMS3_k127_6061768_19 - - - - 0.0000000000000000003222 91.0
CMS3_k127_6061768_2 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1009.0
CMS3_k127_6061768_21 Universal stress protein family - - - 0.000000001182 68.0
CMS3_k127_6061768_22 peptidyl-tyrosine sulfation - - - 0.00000004216 64.0
CMS3_k127_6061768_23 gliding motility-associated protein GldE - - - 0.000007628 50.0
CMS3_k127_6061768_3 FtsX-like permease family - - - 7.027e-236 754.0
CMS3_k127_6061768_4 Sulfate permease family K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 608.0
CMS3_k127_6061768_5 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 498.0
CMS3_k127_6061768_6 Histidinol phosphatase and related hydrolases of the PHP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 447.0
CMS3_k127_6061768_7 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 302.0
CMS3_k127_6061768_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 296.0
CMS3_k127_6061768_9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000177 273.0
CMS3_k127_6062134_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 5.434e-237 741.0
CMS3_k127_6062134_1 Alpha-L-fucosidase K01206 - 3.2.1.51 5.558e-229 714.0
CMS3_k127_6062134_10 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 330.0
CMS3_k127_6062134_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 312.0
CMS3_k127_6062134_12 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 298.0
CMS3_k127_6062134_13 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007545 271.0
CMS3_k127_6062134_14 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009316 282.0
CMS3_k127_6062134_15 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001753 254.0
CMS3_k127_6062134_16 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000002297 241.0
CMS3_k127_6062134_17 YjgF/chorismate_mutase-like, putative endoribonuclease K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000007645 230.0
CMS3_k127_6062134_18 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006193 237.0
CMS3_k127_6062134_19 Protein of unknown function (DUF1348) K09958 - - 0.0000000000000000000000000000000000000000000000000000000000000102 218.0
CMS3_k127_6062134_2 TIGRFAM cysteine desulfurase family protein, VC1184 subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 503.0
CMS3_k127_6062134_20 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000008864 214.0
CMS3_k127_6062134_21 - - - - 0.00000000000000000000000000000000000000000000000000000000002607 208.0
CMS3_k127_6062134_22 tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000174 191.0
CMS3_k127_6062134_23 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000009901 188.0
CMS3_k127_6062134_24 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000005575 184.0
CMS3_k127_6062134_25 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000001389 176.0
CMS3_k127_6062134_26 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000192 181.0
CMS3_k127_6062134_27 tRNA_anti-like - - - 0.000000000000000000000000000000000000000001264 161.0
CMS3_k127_6062134_29 Acetyltransferase (GNAT) domain K22441 - 2.3.1.57 0.00000000000000000000000000000000000000002883 158.0
CMS3_k127_6062134_3 Sulfatase maturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 497.0
CMS3_k127_6062134_30 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000004775 157.0
CMS3_k127_6062134_31 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000000000189 147.0
CMS3_k127_6062134_32 SnoaL-like domain - - - 0.0000000000000000000000000000000007828 135.0
CMS3_k127_6062134_33 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000002823 133.0
CMS3_k127_6062134_34 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000003628 121.0
CMS3_k127_6062134_35 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000211 124.0
CMS3_k127_6062134_36 MafB19-like deaminase - - - 0.000000000000000000000001375 106.0
CMS3_k127_6062134_37 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.0000000000000000000007944 104.0
CMS3_k127_6062134_38 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000006264 91.0
CMS3_k127_6062134_39 - - - - 0.0000000000000192 75.0
CMS3_k127_6062134_4 Two component regulator three Y domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 486.0
CMS3_k127_6062134_40 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000008716 68.0
CMS3_k127_6062134_41 Disulphide bond corrector protein DsbC - - - 0.00000000002731 70.0
CMS3_k127_6062134_42 - - - - 0.00000000007411 66.0
CMS3_k127_6062134_43 - - - - 0.000000004419 62.0
CMS3_k127_6062134_44 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000005853 66.0
CMS3_k127_6062134_46 - - - - 0.00000009053 63.0
CMS3_k127_6062134_47 Psort location OuterMembrane, score - - - 0.0000001354 61.0
CMS3_k127_6062134_48 YCII-related domain - - - 0.000003595 56.0
CMS3_k127_6062134_5 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 446.0
CMS3_k127_6062134_51 MafB19-like deaminase K01487 - 3.5.4.3 0.0002926 46.0
CMS3_k127_6062134_52 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0006192 51.0
CMS3_k127_6062134_6 Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 385.0
CMS3_k127_6062134_7 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 353.0
CMS3_k127_6062134_8 Peptidase family S51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 337.0
CMS3_k127_6062134_9 Pyridoxamine 5'-phosphate K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 335.0
CMS3_k127_610091_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1315.0
CMS3_k127_610091_1 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 2e-323 1005.0
CMS3_k127_610091_10 lacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 457.0
CMS3_k127_610091_11 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 409.0
CMS3_k127_610091_12 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 402.0
CMS3_k127_610091_13 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 360.0
CMS3_k127_610091_14 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 346.0
CMS3_k127_610091_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 347.0
CMS3_k127_610091_16 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 332.0
CMS3_k127_610091_17 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 317.0
CMS3_k127_610091_18 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 316.0
CMS3_k127_610091_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008071 301.0
CMS3_k127_610091_2 PFAM D-galactarate dehydratase Altronate hydrolase K01685 - 4.2.1.7 1.75e-269 838.0
CMS3_k127_610091_20 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007101 269.0
CMS3_k127_610091_21 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003897 267.0
CMS3_k127_610091_22 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000000001618 256.0
CMS3_k127_610091_23 Peptidoglycan-synthase activator LpoB K07337 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001971 251.0
CMS3_k127_610091_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001745 242.0
CMS3_k127_610091_25 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000001852 204.0
CMS3_k127_610091_26 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000004325 183.0
CMS3_k127_610091_27 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000008893 168.0
CMS3_k127_610091_28 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000000000000000000003711 170.0
CMS3_k127_610091_29 isomerase K01817 - 5.3.1.24 0.000000000000000000000000000005357 126.0
CMS3_k127_610091_3 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.151e-263 830.0
CMS3_k127_610091_30 Glucuronate isomerase K01812 - 5.3.1.12 0.0000000000000000000000000003383 114.0
CMS3_k127_610091_31 - - - - 0.000000000000000000000006017 107.0
CMS3_k127_610091_32 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000001078 95.0
CMS3_k127_610091_33 - - - - 0.000000000000000000009441 101.0
CMS3_k127_610091_35 Gluconate 5-dehydrogenase K00046 - 1.1.1.69 0.000000000004158 66.0
CMS3_k127_610091_36 Domain of unknown function - - - 0.0000000001173 63.0
CMS3_k127_610091_37 N-4 methylation of cytosine K00590 - 2.1.1.113 0.0000004377 55.0
CMS3_k127_610091_38 - - - - 0.0007058 50.0
CMS3_k127_610091_4 transmembrane transporter activity K08191 - - 1.425e-204 644.0
CMS3_k127_610091_5 PFAM Mannitol dehydrogenase K00009,K00041 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.17,1.1.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 608.0
CMS3_k127_610091_6 PFAM PfkB K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 538.0
CMS3_k127_610091_7 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 537.0
CMS3_k127_610091_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 510.0
CMS3_k127_610091_9 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 480.0
CMS3_k127_6158319_0 CHAT domain - - - 1.247e-250 803.0
CMS3_k127_6158319_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.547e-203 638.0
CMS3_k127_6158319_10 Methyltransferase - - - 0.0000000000000005323 79.0
CMS3_k127_6158319_2 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 449.0
CMS3_k127_6158319_3 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 432.0
CMS3_k127_6158319_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 346.0
CMS3_k127_6158319_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 315.0
CMS3_k127_6158319_6 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 301.0
CMS3_k127_6158319_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000003644 265.0
CMS3_k127_6158319_8 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002796 244.0
CMS3_k127_6158319_9 PFAM EamA-like transporter family - - - 0.000000000000000000000008355 102.0
CMS3_k127_6160941_0 Sugar (and other) transporter - - - 1.067e-196 624.0
CMS3_k127_6160941_1 Sodium/hydrogen exchanger family K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 458.0
CMS3_k127_6160941_2 Oxidoreductase K16044 - 1.1.1.371 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 452.0
CMS3_k127_6160941_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000001838 209.0
CMS3_k127_6160941_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000007573 188.0
CMS3_k127_6160941_5 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000003071 147.0
CMS3_k127_6160941_6 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000008825 108.0
CMS3_k127_6160941_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000134 76.0
CMS3_k127_6190305_0 FtsX-like permease family K02004 - - 0.0 1014.0
CMS3_k127_6190305_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 7.89e-317 979.0
CMS3_k127_6190305_10 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000145 163.0
CMS3_k127_6190305_11 TIR domain - - - 0.000000000002021 80.0
CMS3_k127_6190305_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000051 49.0
CMS3_k127_6190305_2 C-terminal domain of CHU protein family - - - 3.974e-306 973.0
CMS3_k127_6190305_3 Amidohydrolase family - - - 1.514e-203 647.0
CMS3_k127_6190305_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 336.0
CMS3_k127_6190305_5 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000006787 268.0
CMS3_k127_6190305_6 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000583 261.0
CMS3_k127_6190305_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000008955 203.0
CMS3_k127_6190305_8 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000001936 180.0
CMS3_k127_6190305_9 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000001058 190.0
CMS3_k127_6280852_0 PFAM Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 433.0
CMS3_k127_6280852_1 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000004104 180.0
CMS3_k127_6311947_0 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0 1060.0
CMS3_k127_6311947_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 590.0
CMS3_k127_6311947_2 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 418.0
CMS3_k127_6328554_0 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000007555 209.0
CMS3_k127_6328554_1 membrane - - - 0.00000000000000000000000000000000000000000000775 166.0
CMS3_k127_6328554_2 transcriptional regulator - - - 0.00000000000000000000000000000000001027 140.0
CMS3_k127_6415767_0 Protein of unknown function (DUF1549) - - - 0.0 1176.0
CMS3_k127_6415767_1 Protein of unknown function (DUF1501) - - - 1.435e-238 744.0
CMS3_k127_6415767_2 NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 576.0
CMS3_k127_6415767_3 Outer membrane receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 542.0
CMS3_k127_6415767_4 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 317.0
CMS3_k127_6415767_5 zinc D-Ala-D-Ala carboxypeptidase activity K08641 - 3.4.13.22 0.0000000003001 72.0
CMS3_k127_6415767_6 GDSL-like Lipase/Acylhydrolase family - - - 0.00002384 56.0
CMS3_k127_6630850_0 metal-dependent hydrolase with the TIM-barrel fold - - - 1.89e-241 757.0
CMS3_k127_6630850_1 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 606.0
CMS3_k127_6630850_10 BPTI/Kunitz family of serine protease inhibitors. - - - 0.000000000000000003972 98.0
CMS3_k127_6630850_11 - - - - 0.000000000001237 74.0
CMS3_k127_6630850_2 leucine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 416.0
CMS3_k127_6630850_3 capsule biosynthesis protein CapA K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 317.0
CMS3_k127_6630850_4 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004252 260.0
CMS3_k127_6630850_5 Phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000002126 234.0
CMS3_k127_6630850_6 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000223 185.0
CMS3_k127_6630850_8 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000008035 95.0
CMS3_k127_6630850_9 PFAM Rhomboid family - - - 0.00000000000000000022 89.0
CMS3_k127_66501_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001008 279.0
CMS3_k127_66501_1 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001267 276.0
CMS3_k127_66501_2 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000007313 203.0
CMS3_k127_66501_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000006863 127.0
CMS3_k127_6700255_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1220.0
CMS3_k127_6700255_1 Nitrous oxide reductase K00376 - 1.7.2.4 0.0 1068.0
CMS3_k127_6700255_10 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 383.0
CMS3_k127_6700255_11 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 338.0
CMS3_k127_6700255_12 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 324.0
CMS3_k127_6700255_13 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 303.0
CMS3_k127_6700255_14 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 295.0
CMS3_k127_6700255_15 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003404 284.0
CMS3_k127_6700255_16 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007533 276.0
CMS3_k127_6700255_17 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002023 272.0
CMS3_k127_6700255_18 ATPases associated with a variety of cellular activities K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000312 254.0
CMS3_k127_6700255_19 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000000000000000000000000000000000000801 232.0
CMS3_k127_6700255_2 Ribonucleotide reductase, barrel domain K00525,K21636 - 1.1.98.6,1.17.4.1 2.8e-237 748.0
CMS3_k127_6700255_20 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001987 212.0
CMS3_k127_6700255_21 - - - - 0.00000000000000000000000000000000000000000000000000008141 193.0
CMS3_k127_6700255_22 PFAM cytochrome c - - - 0.000000000000000000000000000000000000000000000000002086 187.0
CMS3_k127_6700255_23 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000543 176.0
CMS3_k127_6700255_24 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000006954 177.0
CMS3_k127_6700255_25 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000000000000004434 155.0
CMS3_k127_6700255_26 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000007418 147.0
CMS3_k127_6700255_27 NosL K19342 - - 0.000000000000000000000000000000000000183 146.0
CMS3_k127_6700255_28 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000001567 139.0
CMS3_k127_6700255_29 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus - - - 0.00000000000000000000000000000001927 133.0
CMS3_k127_6700255_3 TIGRFAM cytochrome c oxidase accessory protein - - - 7.393e-214 673.0
CMS3_k127_6700255_30 Universal stress protein - - - 0.00000000000000000000000007913 113.0
CMS3_k127_6700255_31 FixH K09926 - - 0.00000000000000000000000008615 111.0
CMS3_k127_6700255_32 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000133 102.0
CMS3_k127_6700255_33 Na+/Pi-cotransporter K03324 - - 0.00000000000000000001236 92.0
CMS3_k127_6700255_34 - - - - 0.00000000000001764 78.0
CMS3_k127_6700255_35 - - - - 0.0000000001367 71.0
CMS3_k127_6700255_37 cellular response to DNA damage stimulus - - - 0.00000001341 63.0
CMS3_k127_6700255_4 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 451.0
CMS3_k127_6700255_5 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 457.0
CMS3_k127_6700255_6 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 426.0
CMS3_k127_6700255_7 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 416.0
CMS3_k127_6700255_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 416.0
CMS3_k127_6700255_9 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 398.0
CMS3_k127_6721878_0 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000007209 220.0
CMS3_k127_6721878_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000004282 217.0
CMS3_k127_6721878_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000139 166.0
CMS3_k127_6721878_3 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000008581 151.0
CMS3_k127_6721878_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000004475 55.0
CMS3_k127_67305_0 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 621.0
CMS3_k127_67305_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002849 257.0
CMS3_k127_67305_2 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003617 246.0
CMS3_k127_67305_4 Copper amine oxidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000001154 203.0
CMS3_k127_6739899_0 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.0 1270.0
CMS3_k127_6739899_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.382e-254 790.0
CMS3_k127_6739899_10 DinB family - - - 0.0000000000000000000000000000000000000000000000000008837 188.0
CMS3_k127_6739899_11 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000003026 185.0
CMS3_k127_6739899_13 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000000000000000001482 166.0
CMS3_k127_6739899_14 Domain of unknown function (DUF4783) - - - 0.000000000000000000000000000000000000000611 152.0
CMS3_k127_6739899_15 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000000003823 145.0
CMS3_k127_6739899_2 ABC-type multidrug transport system ATPase and permease K11085 - - 7.544e-242 760.0
CMS3_k127_6739899_3 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 423.0
CMS3_k127_6739899_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 379.0
CMS3_k127_6739899_5 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 343.0
CMS3_k127_6739899_6 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 289.0
CMS3_k127_6739899_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001437 229.0
CMS3_k127_6739899_8 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000000000000000000000000000000000000001501 225.0
CMS3_k127_6739899_9 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000001979 198.0
CMS3_k127_6742552_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 546.0
CMS3_k127_6742552_1 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 474.0
CMS3_k127_6742552_2 PFAM chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 367.0
CMS3_k127_6742552_3 phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000222 268.0
CMS3_k127_6742552_4 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000000000000000001901 208.0
CMS3_k127_6742552_5 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.0000000000000000000000001146 111.0
CMS3_k127_6742552_6 TPR repeat-containing protein - - - 0.00000000000000000004723 91.0
CMS3_k127_6760805_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 5.176e-236 735.0
CMS3_k127_6760805_1 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 8.866e-226 725.0
CMS3_k127_6760805_10 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 403.0
CMS3_k127_6760805_11 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 389.0
CMS3_k127_6760805_12 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 382.0
CMS3_k127_6760805_13 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 296.0
CMS3_k127_6760805_14 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009967 265.0
CMS3_k127_6760805_15 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000009047 232.0
CMS3_k127_6760805_16 Phenylacetate-CoA oxygenase K02612 - - 0.00000000000000000000000000000000000000000000000000000000000000002472 226.0
CMS3_k127_6760805_17 phenylacetate catabolic process K02610 - - 0.00000000000000000000000000000000000000000000000000000000000002998 226.0
CMS3_k127_6760805_18 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000005743 216.0
CMS3_k127_6760805_19 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000009448 229.0
CMS3_k127_6760805_2 FtsX-like permease family K02004 - - 9.464e-219 704.0
CMS3_k127_6760805_20 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000008976 177.0
CMS3_k127_6760805_21 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000001014 172.0
CMS3_k127_6760805_22 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000001453 171.0
CMS3_k127_6760805_23 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000005093 166.0
CMS3_k127_6760805_24 DinB superfamily - - - 0.000000000000000000000000000000000001562 143.0
CMS3_k127_6760805_25 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000005102 138.0
CMS3_k127_6760805_26 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.00000000000000000000000000001189 128.0
CMS3_k127_6760805_27 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000006414 87.0
CMS3_k127_6760805_28 - - - - 0.000000000000000006879 91.0
CMS3_k127_6760805_3 Insulinase (Peptidase family M16) - - - 6.722e-217 681.0
CMS3_k127_6760805_4 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 1.782e-197 617.0
CMS3_k127_6760805_5 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 556.0
CMS3_k127_6760805_6 Fatty acid desaturase K00496 - 1.14.15.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 519.0
CMS3_k127_6760805_7 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 - 4.1.99.22,4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 453.0
CMS3_k127_6760805_8 COGs COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 431.0
CMS3_k127_6760805_9 PFAM Succinylglutamate desuccinylase Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 422.0
CMS3_k127_6794080_0 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 540.0
CMS3_k127_6794080_1 fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 413.0
CMS3_k127_6794080_2 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000025 211.0
CMS3_k127_6794080_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000002111 190.0
CMS3_k127_6794080_5 endonuclease containing a URI domain K07461 - - 0.0000005258 52.0
CMS3_k127_6844533_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 303.0
CMS3_k127_6844533_1 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000006315 255.0
CMS3_k127_6844533_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000003012 153.0
CMS3_k127_6844533_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000002337 131.0
CMS3_k127_6878282_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.91e-209 660.0
CMS3_k127_6878282_1 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 558.0
CMS3_k127_6878282_10 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 288.0
CMS3_k127_6878282_11 glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005156 267.0
CMS3_k127_6878282_12 Pfam Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005625 259.0
CMS3_k127_6878282_13 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001151 238.0
CMS3_k127_6878282_14 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002945 244.0
CMS3_k127_6878282_15 PFAM Signal transduction histidine kinase, internal region - - - 0.00000000000000000000000000000000000000000002526 186.0
CMS3_k127_6878282_16 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000002213 133.0
CMS3_k127_6878282_17 - - - - 0.000000000000000000000000000003706 123.0
CMS3_k127_6878282_18 PFAM Prokaryotic diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.0000000000000000000000003884 108.0
CMS3_k127_6878282_19 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000368 95.0
CMS3_k127_6878282_2 TIGRFAM L-asparaginases, type I K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 429.0
CMS3_k127_6878282_20 Histidine kinase - - - 0.000000000000000003495 89.0
CMS3_k127_6878282_22 Methyltransferase - - - 0.0001428 52.0
CMS3_k127_6878282_23 Glycosyl transferase 4-like domain - - - 0.0003928 52.0
CMS3_k127_6878282_3 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 422.0
CMS3_k127_6878282_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 373.0
CMS3_k127_6878282_5 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 365.0
CMS3_k127_6878282_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 360.0
CMS3_k127_6878282_7 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 346.0
CMS3_k127_6878282_8 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 338.0
CMS3_k127_6878282_9 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 332.0
CMS3_k127_688888_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 2.263e-199 633.0
CMS3_k127_688888_1 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000009045 226.0
CMS3_k127_6906897_0 Penicillin amidase K01434 - 3.5.1.11 1.609e-240 767.0
CMS3_k127_6906897_1 COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 601.0
CMS3_k127_6906897_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009979 243.0
CMS3_k127_6906897_11 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000005324 238.0
CMS3_k127_6906897_12 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000007197 224.0
CMS3_k127_6906897_13 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000000000000000000000002337 214.0
CMS3_k127_6906897_14 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000000000000000000000000000000003149 189.0
CMS3_k127_6906897_15 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000001753 164.0
CMS3_k127_6906897_16 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000002082 159.0
CMS3_k127_6906897_17 NUMOD4 motif - - - 0.000000000000000000000000000000000000008139 152.0
CMS3_k127_6906897_18 - - - - 0.000000000000000000000000000000002594 133.0
CMS3_k127_6906897_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 593.0
CMS3_k127_6906897_20 - - - - 0.000000000000000000000000000499 118.0
CMS3_k127_6906897_21 PFAM PQ loop repeat K15383 - - 0.00000000000000000000000002031 110.0
CMS3_k127_6906897_22 Thioredoxin-like - - - 0.0000000000001277 82.0
CMS3_k127_6906897_23 Putative prokaryotic signal transducing protein - - - 0.0000000009897 66.0
CMS3_k127_6906897_24 Psort location Cytoplasmic, score 8.96 - - - 0.00002305 53.0
CMS3_k127_6906897_3 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 534.0
CMS3_k127_6906897_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 451.0
CMS3_k127_6906897_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 374.0
CMS3_k127_6906897_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 361.0
CMS3_k127_6906897_7 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001545 291.0
CMS3_k127_6906897_8 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001907 284.0
CMS3_k127_6906897_9 Domain of unknown function (DUF4918) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008898 260.0
CMS3_k127_6963595_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1454.0
CMS3_k127_6963595_1 symporter activity K03307,K20989 - - 5.263e-233 728.0
CMS3_k127_6963595_10 - - - - 0.0002695 49.0
CMS3_k127_6963595_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 510.0
CMS3_k127_6963595_3 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 533.0
CMS3_k127_6963595_4 TIGRFAM flavoprotein, HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 454.0
CMS3_k127_6963595_5 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 315.0
CMS3_k127_6963595_6 MarR family - - - 0.000000000000000000000000000000000000000000003829 168.0
CMS3_k127_6963595_7 - - - - 0.0000000000000000008888 93.0
CMS3_k127_6965012_0 Zinc carboxypeptidase - - - 0.0 1373.0
CMS3_k127_6965012_1 Protein of unknown function (DUF3352) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 446.0
CMS3_k127_6965012_2 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 327.0
CMS3_k127_6965012_3 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000002337 181.0
CMS3_k127_6977292_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 1.056e-214 691.0
CMS3_k127_6977292_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 436.0
CMS3_k127_6977292_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002627 263.0
CMS3_k127_6977292_3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270,K21055,K21749 GO:0003674,GO:0003824,GO:0008781,GO:0016740,GO:0016772,GO:0016779,GO:0070567 2.7.7.43,2.7.7.92,3.1.3.103,3.1.3.45 0.0000000000000000000000000000000000000000000000002318 181.0
CMS3_k127_6977292_4 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000004154 53.0
CMS3_k127_7001969_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 546.0
CMS3_k127_7001969_1 N,N-dimethylaniline monooxygenase activity K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 408.0
CMS3_k127_7001969_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 309.0
CMS3_k127_7001969_3 Methyltransferase domain - - - 0.00000000000009832 73.0
CMS3_k127_7005877_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1554.0
CMS3_k127_7005877_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.0 1172.0
CMS3_k127_7005877_2 SprB repeat - - - 1.41e-214 725.0
CMS3_k127_7005877_3 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 516.0
CMS3_k127_7005877_4 - - - - 0.00000000000000000000000000000000000000000000001601 181.0
CMS3_k127_7005877_5 Acyl-ACP thioesterase K07107 - - 0.0000000000000000000000000000000002659 136.0
CMS3_k127_7010510_0 Carboxypeptidase regulatory-like domain - - - 0.0 1212.0
CMS3_k127_7010510_1 PFAM Zinc carboxypeptidase - - - 0.0 1022.0
CMS3_k127_7010510_10 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 535.0
CMS3_k127_7010510_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 446.0
CMS3_k127_7010510_12 TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 422.0
CMS3_k127_7010510_13 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 327.0
CMS3_k127_7010510_14 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 301.0
CMS3_k127_7010510_15 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001434 280.0
CMS3_k127_7010510_16 Haem-binding domain - - - 0.0000000000000000000000000000000000000000003435 163.0
CMS3_k127_7010510_17 - - - - 0.00000000000000000000000000000000000000003306 158.0
CMS3_k127_7010510_18 DinB superfamily - - - 0.00000000000000000000000000000000000005726 147.0
CMS3_k127_7010510_19 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000001827 102.0
CMS3_k127_7010510_2 Aldehyde dehydrogenase family K00131 - 1.2.1.9 6.061e-254 792.0
CMS3_k127_7010510_20 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 0.0000000000000000007539 88.0
CMS3_k127_7010510_3 tetratricopeptide repeat - - - 1.108e-250 814.0
CMS3_k127_7010510_4 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 2.079e-244 760.0
CMS3_k127_7010510_5 Belongs to the glutamate synthase family - - - 1.973e-222 700.0
CMS3_k127_7010510_6 Protein of unknown function (DUF2961) - - - 1.064e-196 618.0
CMS3_k127_7010510_7 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 571.0
CMS3_k127_7010510_8 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 542.0
CMS3_k127_7010510_9 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 541.0
CMS3_k127_7029281_0 PFAM amidohydrolase - - - 8.376e-217 686.0
CMS3_k127_7045655_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1233.0
CMS3_k127_7045655_1 ABC transporter - - - 3.51e-312 962.0
CMS3_k127_7045655_10 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 568.0
CMS3_k127_7045655_11 peptidase, M20 K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 522.0
CMS3_k127_7045655_12 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 510.0
CMS3_k127_7045655_13 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 434.0
CMS3_k127_7045655_14 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 400.0
CMS3_k127_7045655_15 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 366.0
CMS3_k127_7045655_16 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 355.0
CMS3_k127_7045655_17 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 303.0
CMS3_k127_7045655_18 TIGRFAM pseudouridine synthase, RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 303.0
CMS3_k127_7045655_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 307.0
CMS3_k127_7045655_2 OmpA family - - - 3.197e-263 825.0
CMS3_k127_7045655_20 penicillin-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007687 286.0
CMS3_k127_7045655_21 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000001802 268.0
CMS3_k127_7045655_22 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000001549 223.0
CMS3_k127_7045655_23 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000000001682 184.0
CMS3_k127_7045655_24 Domain of unknown function (DUF4421) - - - 0.0000000000000000000000000000000000000000000000005405 188.0
CMS3_k127_7045655_25 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000002373 181.0
CMS3_k127_7045655_26 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000000004193 157.0
CMS3_k127_7045655_27 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000002146 64.0
CMS3_k127_7045655_3 PFAM GH3 auxin-responsive promoter - - - 1.419e-251 783.0
CMS3_k127_7045655_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 2.151e-240 752.0
CMS3_k127_7045655_5 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.443e-215 677.0
CMS3_k127_7045655_6 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 9.683e-194 614.0
CMS3_k127_7045655_7 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 607.0
CMS3_k127_7045655_8 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 591.0
CMS3_k127_7045655_9 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 588.0
CMS3_k127_7061799_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.0 1610.0
CMS3_k127_7061799_1 Sulfatase-modifying factor enzyme 1 - - - 0.0 1036.0
CMS3_k127_7061799_10 Arabinogalactan K01224 - 3.2.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 451.0
CMS3_k127_7061799_11 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 420.0
CMS3_k127_7061799_12 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 432.0
CMS3_k127_7061799_13 SMP-30/Gluconolaconase/LRE-like region K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 394.0
CMS3_k127_7061799_14 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 371.0
CMS3_k127_7061799_15 His Kinase A (phosphoacceptor) domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 340.0
CMS3_k127_7061799_16 AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004213 274.0
CMS3_k127_7061799_17 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001079 269.0
CMS3_k127_7061799_18 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001656 269.0
CMS3_k127_7061799_19 Predicted Zn-dependent protease (DUF2268) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006356 256.0
CMS3_k127_7061799_2 Beta-L-arabinofuranosidase, GH127 K09955 - - 1.833e-282 881.0
CMS3_k127_7061799_20 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003194 251.0
CMS3_k127_7061799_21 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001126 241.0
CMS3_k127_7061799_22 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
CMS3_k127_7061799_23 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000002895 222.0
CMS3_k127_7061799_24 IgGFc binding protein - - - 0.000000000000000000000000000000000000000000000001432 200.0
CMS3_k127_7061799_25 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.000000000000000000000000000000000000000000000717 173.0
CMS3_k127_7061799_26 Protein of unknown function (DUF1702) K21161 - - 0.0000000000000000000000000000187 128.0
CMS3_k127_7061799_27 acyl carrier protein K02078 - - 0.000000000000000000000008057 103.0
CMS3_k127_7061799_28 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000009293 102.0
CMS3_k127_7061799_29 dehydratase K02372 - 4.2.1.59 0.0000000000000000169 87.0
CMS3_k127_7061799_3 Na+/Pi-cotransporter K03324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 607.0
CMS3_k127_7061799_30 - - - - 0.000000000000004324 80.0
CMS3_k127_7061799_31 Domain of unknown function DUF11 - - - 0.0000000000003078 84.0
CMS3_k127_7061799_32 PFAM Abortive infection protein K07052 - - 0.0000001955 62.0
CMS3_k127_7061799_33 dehydratase - - - 0.0000002374 58.0
CMS3_k127_7061799_34 - - - - 0.000002431 57.0
CMS3_k127_7061799_4 COGs COG2133 Glucose sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 563.0
CMS3_k127_7061799_5 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 547.0
CMS3_k127_7061799_6 geranylgeranyl reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 535.0
CMS3_k127_7061799_7 PFAM aldo keto reductase K19265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 521.0
CMS3_k127_7061799_8 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 482.0
CMS3_k127_7061799_9 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 467.0
CMS3_k127_7061826_0 Domain of unknown function (DUF4357) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 327.0
CMS3_k127_7061826_1 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000008419 228.0
CMS3_k127_7061826_2 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.00000000000000000000000000003905 121.0
CMS3_k127_7065709_0 Molybdopterin oxidoreductase K07812,K08352 - 1.7.2.3,1.8.5.5 0.0 1568.0
CMS3_k127_7065709_1 cellulose binding - - - 0.0 1436.0
CMS3_k127_7065709_10 MacB-like periplasmic core domain - - - 1.364e-251 802.0
CMS3_k127_7065709_100 Glycosyl hydrolases family 35 - - - 0.00003487 47.0
CMS3_k127_7065709_101 Belongs to the HesB IscA family K13628 - - 0.0005536 46.0
CMS3_k127_7065709_11 PFAM Serine carboxypeptidase - - - 4.162e-237 741.0
CMS3_k127_7065709_12 Fe-S oxidoreductase - - - 6.344e-231 734.0
CMS3_k127_7065709_13 PFAM TonB-dependent Receptor Plug - - - 4.531e-230 737.0
CMS3_k127_7065709_14 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 2.523e-219 689.0
CMS3_k127_7065709_15 4Fe-4S binding domain - - - 2.133e-218 689.0
CMS3_k127_7065709_16 Peptidase family M1 domain - - - 3.691e-215 681.0
CMS3_k127_7065709_17 Belongs to the xylose isomerase family K01805 - 5.3.1.5 9.695e-207 650.0
CMS3_k127_7065709_18 Aminotransferase class-V - - - 1.272e-202 642.0
CMS3_k127_7065709_19 malate quinone oxidoreductase K00116 - 1.1.5.4 7.516e-199 631.0
CMS3_k127_7065709_2 Peroxidase K03782 - 1.11.1.21 0.0 1253.0
CMS3_k127_7065709_20 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 608.0
CMS3_k127_7065709_21 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 608.0
CMS3_k127_7065709_22 Heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 592.0
CMS3_k127_7065709_23 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 578.0
CMS3_k127_7065709_24 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 566.0
CMS3_k127_7065709_25 STAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 537.0
CMS3_k127_7065709_26 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 520.0
CMS3_k127_7065709_27 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 514.0
CMS3_k127_7065709_28 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 486.0
CMS3_k127_7065709_29 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 476.0
CMS3_k127_7065709_3 receptor K02014 - - 0.0 1217.0
CMS3_k127_7065709_30 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 471.0
CMS3_k127_7065709_31 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 463.0
CMS3_k127_7065709_32 COGs COG2220 Zn-dependent hydrolase of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 462.0
CMS3_k127_7065709_33 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 460.0
CMS3_k127_7065709_34 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 426.0
CMS3_k127_7065709_35 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 402.0
CMS3_k127_7065709_36 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 383.0
CMS3_k127_7065709_37 transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 384.0
CMS3_k127_7065709_38 GTPase activator activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 396.0
CMS3_k127_7065709_39 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 383.0
CMS3_k127_7065709_4 Alpha-glucosidase K01187,K21574 GO:0000272,GO:0003674,GO:0003824,GO:0004339,GO:0004553,GO:0004558,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015926,GO:0016020,GO:0016052,GO:0016787,GO:0016798,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044464,GO:0046872,GO:0071704,GO:0071944,GO:0090599,GO:1901575 3.2.1.20,3.2.1.3 0.0 1174.0
CMS3_k127_7065709_40 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 352.0
CMS3_k127_7065709_41 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 344.0
CMS3_k127_7065709_42 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 340.0
CMS3_k127_7065709_43 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 324.0
CMS3_k127_7065709_44 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 311.0
CMS3_k127_7065709_45 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 301.0
CMS3_k127_7065709_46 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 293.0
CMS3_k127_7065709_47 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
CMS3_k127_7065709_48 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001693 288.0
CMS3_k127_7065709_49 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003007 280.0
CMS3_k127_7065709_5 PFAM TonB-dependent Receptor Plug - - - 0.0 1163.0
CMS3_k127_7065709_50 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001072 279.0
CMS3_k127_7065709_51 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001855 270.0
CMS3_k127_7065709_52 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002738 267.0
CMS3_k127_7065709_53 DeoR C terminal sensor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
CMS3_k127_7065709_54 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003583 270.0
CMS3_k127_7065709_55 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002556 247.0
CMS3_k127_7065709_56 electron transfer activity K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001329 249.0
CMS3_k127_7065709_57 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000004031 245.0
CMS3_k127_7065709_58 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000009841 243.0
CMS3_k127_7065709_59 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000002123 215.0
CMS3_k127_7065709_6 lysine biosynthetic process via aminoadipic acid - - - 0.0 1128.0
CMS3_k127_7065709_60 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000004743 229.0
CMS3_k127_7065709_61 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000001027 217.0
CMS3_k127_7065709_62 - - - - 0.0000000000000000000000000000000000000000000000000000000001078 209.0
CMS3_k127_7065709_63 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000003849 207.0
CMS3_k127_7065709_64 Domain of unknown function (DUF4974) - - - 0.0000000000000000000000000000000000000000000000000000000004425 216.0
CMS3_k127_7065709_65 YqcI/YcgG family - - - 0.000000000000000000000000000000000000000000000000000000001959 208.0
CMS3_k127_7065709_66 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000008896 207.0
CMS3_k127_7065709_67 - - - - 0.0000000000000000000000000000000000000000000000000001146 194.0
CMS3_k127_7065709_68 aminopeptidase activity K07004 - - 0.000000000000000000000000000000000000000000000000005904 204.0
CMS3_k127_7065709_69 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000001352 175.0
CMS3_k127_7065709_7 COG2366 Protein related to penicillin acylase - - - 0.0 1014.0
CMS3_k127_7065709_70 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000006124 165.0
CMS3_k127_7065709_71 glycine decarboxylation via glycine cleavage system K02437 - - 0.00000000000000000000000000000000000000000002357 166.0
CMS3_k127_7065709_72 - - - - 0.000000000000000000000000000000000000000000739 166.0
CMS3_k127_7065709_73 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000001139 163.0
CMS3_k127_7065709_74 - - - - 0.000000000000000000000000000000000000001312 166.0
CMS3_k127_7065709_75 YceI-like domain - - - 0.000000000000000000000000000000000000001916 156.0
CMS3_k127_7065709_76 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000003227 165.0
CMS3_k127_7065709_77 DoxX-like family - - - 0.00000000000000000000000000000000002705 138.0
CMS3_k127_7065709_78 Chromosome partitioning K03496 - - 0.00000000000000000000000000000000005226 143.0
CMS3_k127_7065709_79 RibD C-terminal domain K00287 - 1.5.1.3 0.0000000000000000000000000000001391 125.0
CMS3_k127_7065709_8 Glucosamine-6-phosphate isomerase K02564 - 3.5.99.6 2.059e-301 934.0
CMS3_k127_7065709_80 - - - - 0.000000000000000000000000000007585 124.0
CMS3_k127_7065709_82 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000001394 117.0
CMS3_k127_7065709_83 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000195 115.0
CMS3_k127_7065709_84 - K07092 - - 0.000000000000000000000001101 108.0
CMS3_k127_7065709_85 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000001303 102.0
CMS3_k127_7065709_86 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.0000000000000000000006401 101.0
CMS3_k127_7065709_87 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000004524 96.0
CMS3_k127_7065709_88 Sulfurtransferase TusA - - - 0.00000000000000000002101 93.0
CMS3_k127_7065709_89 Dodecin K09165 - - 0.00000000000000000008215 92.0
CMS3_k127_7065709_9 FtsX-like permease family - - - 4.558e-288 909.0
CMS3_k127_7065709_90 Domain of unknown function (DUF4397) - - - 0.0000000000000000002157 97.0
CMS3_k127_7065709_91 helix_turn_helix, Lux Regulon - - - 0.0000000000000001243 89.0
CMS3_k127_7065709_92 RibD C-terminal domain K00287 - 1.5.1.3 0.000000000001483 71.0
CMS3_k127_7065709_94 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000004647 70.0
CMS3_k127_7065709_95 - - - - 0.00000001503 62.0
CMS3_k127_7065709_97 - - - - 0.0000001353 59.0
CMS3_k127_7065709_98 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.0000004001 63.0
CMS3_k127_7065709_99 Pregnancy-associated plasma protein-A - - - 0.0000008941 59.0
CMS3_k127_7089942_0 PFAM amidohydrolase - - - 0.0 1193.0
CMS3_k127_7089942_1 Tricorn protease homolog K08676 - - 5.873e-296 942.0
CMS3_k127_7089942_10 - - - - 0.00000000000000000000000000000000000000002286 163.0
CMS3_k127_7089942_11 Ketosteroid isomerase-related protein - - - 0.000000000000000000000000000000000003239 140.0
CMS3_k127_7089942_12 protein kinase activity - - - 0.0000000000000000000000000000000001857 152.0
CMS3_k127_7089942_13 - - - - 0.0000000000000000000000005865 114.0
CMS3_k127_7089942_14 Pkd domain containing protein - - - 0.0000000000000000003991 104.0
CMS3_k127_7089942_15 - - - - 0.00000000000000003237 89.0
CMS3_k127_7089942_16 Domain of Unknown Function (DUF350) - - - 0.00000000000000004007 88.0
CMS3_k127_7089942_18 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.00000000000006154 80.0
CMS3_k127_7089942_19 Outer membrane protein beta-barrel domain - - - 0.00000001388 64.0
CMS3_k127_7089942_2 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain - - - 2.961e-215 688.0
CMS3_k127_7089942_3 PFAM Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 422.0
CMS3_k127_7089942_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 406.0
CMS3_k127_7089942_5 Trehalose utilisation K09992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 324.0
CMS3_k127_7089942_6 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002862 293.0
CMS3_k127_7089942_7 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001266 289.0
CMS3_k127_7089942_8 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006182 264.0
CMS3_k127_7089942_9 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000000000000000009226 163.0
CMS3_k127_7098058_0 Motility related/secretion protein - - - 2.32e-219 695.0
CMS3_k127_7098058_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000002687 196.0
CMS3_k127_7098559_0 PFAM ABC transporter - - - 1.022e-226 723.0
CMS3_k127_7098559_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 465.0
CMS3_k127_7098559_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 301.0
CMS3_k127_7098559_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003765 253.0
CMS3_k127_7098559_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000001611 224.0
CMS3_k127_71027_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 578.0
CMS3_k127_71027_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 456.0
CMS3_k127_71027_10 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000004799 228.0
CMS3_k127_71027_11 Belongs to the anti-sigma-factor antagonist family - - - 0.000000000000000000000000000000000000000000000000000000000008089 209.0
CMS3_k127_71027_12 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000001561 192.0
CMS3_k127_71027_13 - - - - 0.000000000000000000000000000000009235 135.0
CMS3_k127_71027_2 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 392.0
CMS3_k127_71027_3 PFAM MORN repeat variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 379.0
CMS3_k127_71027_4 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 343.0
CMS3_k127_71027_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 340.0
CMS3_k127_71027_6 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 339.0
CMS3_k127_71027_7 PFAM SpoU rRNA Methylase family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 290.0
CMS3_k127_71027_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001034 247.0
CMS3_k127_71027_9 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000002087 224.0
CMS3_k127_7103998_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 443.0
CMS3_k127_7103998_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 423.0
CMS3_k127_7103998_10 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000003059 180.0
CMS3_k127_7103998_11 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000001843 161.0
CMS3_k127_7103998_12 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000002918 163.0
CMS3_k127_7103998_13 - - - - 0.000000000000000000000000000000000002155 140.0
CMS3_k127_7103998_14 Glutamyl-tRNAGlu reductase, N-terminal domain K02492 - 1.2.1.70 0.0000000000000000000000000000001896 138.0
CMS3_k127_7103998_15 Dienelactone hydrolase family - - - 0.0000000000000000000000000006067 113.0
CMS3_k127_7103998_16 His Kinase A (phosphoacceptor) domain K07678,K20974 - 2.7.13.3 0.000000000000000000000000026 118.0
CMS3_k127_7103998_17 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000003707 100.0
CMS3_k127_7103998_18 - - - - 0.000000000000004948 83.0
CMS3_k127_7103998_19 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000003446 78.0
CMS3_k127_7103998_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 389.0
CMS3_k127_7103998_20 Tellurite resistance protein TerB - - - 0.000000001403 64.0
CMS3_k127_7103998_21 negative regulation of phosphorylation - - - 0.000000003087 68.0
CMS3_k127_7103998_3 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 330.0
CMS3_k127_7103998_4 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 330.0
CMS3_k127_7103998_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009453 263.0
CMS3_k127_7103998_6 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000001127 221.0
CMS3_k127_7103998_7 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000004181 212.0
CMS3_k127_7103998_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000002399 202.0
CMS3_k127_7103998_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000005666 186.0
CMS3_k127_7156868_0 Glycosyl hydrolase family 115 - - - 0.0 1109.0
CMS3_k127_7156868_1 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 1.033e-231 733.0
CMS3_k127_7156868_2 Dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 592.0
CMS3_k127_7156868_3 PFAM Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 489.0
CMS3_k127_7156868_4 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 458.0
CMS3_k127_7156868_5 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 416.0
CMS3_k127_7156868_6 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002218 251.0
CMS3_k127_7156868_7 superoxide dismutase activity - - - 0.00000000000000000000000000002192 123.0
CMS3_k127_7156868_8 Glycosyl hydrolases family 35 - - - 0.0000000000000000116 84.0
CMS3_k127_7164120_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 0.0 1254.0
CMS3_k127_7164120_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 6.905e-302 947.0
CMS3_k127_7164120_10 Hydroxypyruvate isomerase K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 411.0
CMS3_k127_7164120_11 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 399.0
CMS3_k127_7164120_12 Phage tail sheath C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 392.0
CMS3_k127_7164120_13 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 374.0
CMS3_k127_7164120_14 protein conserved in bacteria K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 359.0
CMS3_k127_7164120_15 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 340.0
CMS3_k127_7164120_16 GNAT acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 316.0
CMS3_k127_7164120_18 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000136 286.0
CMS3_k127_7164120_19 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001896 272.0
CMS3_k127_7164120_2 Oxidoreductase - - - 3.158e-301 930.0
CMS3_k127_7164120_20 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008321 238.0
CMS3_k127_7164120_21 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001154 231.0
CMS3_k127_7164120_22 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000001476 231.0
CMS3_k127_7164120_23 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000001303 220.0
CMS3_k127_7164120_24 Belongs to the sigma-70 factor family - - - 0.0000000000000000000000000000000000000000000000000000000000001834 216.0
CMS3_k127_7164120_25 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000006234 206.0
CMS3_k127_7164120_26 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000498 187.0
CMS3_k127_7164120_27 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000007506 187.0
CMS3_k127_7164120_28 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000007785 183.0
CMS3_k127_7164120_29 Transcriptional regulator - - - 0.000000000000000000000000000000000000001081 152.0
CMS3_k127_7164120_3 2-Nitropropane dioxygenase - - - 8.337e-225 711.0
CMS3_k127_7164120_30 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000001141 151.0
CMS3_k127_7164120_31 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000001038 132.0
CMS3_k127_7164120_32 - - - - 0.000000000000000000000000005074 117.0
CMS3_k127_7164120_33 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000001741 92.0
CMS3_k127_7164120_35 DinB superfamily - - - 0.000000000008085 73.0
CMS3_k127_7164120_36 - - - - 0.0000000007394 63.0
CMS3_k127_7164120_37 Universal stress protein family - - - 0.00000003808 64.0
CMS3_k127_7164120_4 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 600.0
CMS3_k127_7164120_5 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 549.0
CMS3_k127_7164120_6 peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 512.0
CMS3_k127_7164120_7 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 498.0
CMS3_k127_7164120_8 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 496.0
CMS3_k127_7164120_9 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 424.0
CMS3_k127_7170084_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1082.0
CMS3_k127_7170084_1 CarboxypepD_reg-like domain - - - 0.0 1071.0
CMS3_k127_7170084_10 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 595.0
CMS3_k127_7170084_11 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 575.0
CMS3_k127_7170084_12 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 536.0
CMS3_k127_7170084_13 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008179 514.0
CMS3_k127_7170084_14 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 483.0
CMS3_k127_7170084_15 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K14387 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 479.0
CMS3_k127_7170084_16 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 443.0
CMS3_k127_7170084_17 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 441.0
CMS3_k127_7170084_18 TonB-dependent Receptor Plug K21573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 428.0
CMS3_k127_7170084_19 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 409.0
CMS3_k127_7170084_2 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0 1038.0
CMS3_k127_7170084_20 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 391.0
CMS3_k127_7170084_21 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 401.0
CMS3_k127_7170084_22 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 384.0
CMS3_k127_7170084_23 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 380.0
CMS3_k127_7170084_24 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 362.0
CMS3_k127_7170084_25 Hypothetical methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 356.0
CMS3_k127_7170084_26 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 350.0
CMS3_k127_7170084_27 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 334.0
CMS3_k127_7170084_28 cellular modified histidine biosynthetic process K18802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 321.0
CMS3_k127_7170084_29 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 298.0
CMS3_k127_7170084_3 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 4.665e-319 991.0
CMS3_k127_7170084_30 peptide-methionine (S)-S-oxide reductase activity K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 295.0
CMS3_k127_7170084_31 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 289.0
CMS3_k127_7170084_32 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003306 262.0
CMS3_k127_7170084_33 DUF218 domain K03748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004948 252.0
CMS3_k127_7170084_34 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000008198 240.0
CMS3_k127_7170084_35 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000006057 237.0
CMS3_k127_7170084_36 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000001876 224.0
CMS3_k127_7170084_37 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000101 218.0
CMS3_k127_7170084_38 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003767 198.0
CMS3_k127_7170084_39 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000001035 190.0
CMS3_k127_7170084_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 7.977e-263 824.0
CMS3_k127_7170084_40 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000001996 175.0
CMS3_k127_7170084_41 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000001326 178.0
CMS3_k127_7170084_42 domain, Protein - - - 0.0000000000000000000000000000000000000009895 166.0
CMS3_k127_7170084_43 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000001926 150.0
CMS3_k127_7170084_44 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000005842 145.0
CMS3_k127_7170084_45 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000001141 121.0
CMS3_k127_7170084_46 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000007509 104.0
CMS3_k127_7170084_47 HemY protein - - - 0.000000000000000000008783 95.0
CMS3_k127_7170084_49 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002177 80.0
CMS3_k127_7170084_5 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 3.036e-234 734.0
CMS3_k127_7170084_6 Major Facilitator K16211 - - 6.985e-207 659.0
CMS3_k127_7170084_7 OmpA family - - - 6.286e-206 659.0
CMS3_k127_7170084_8 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 1.094e-205 656.0
CMS3_k127_7170084_9 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 605.0
CMS3_k127_7195839_0 ABC transporter K06158 - - 2.198e-269 840.0
CMS3_k127_7195839_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000007731 194.0
CMS3_k127_7207093_0 glutamine synthetase K01915 - 6.3.1.2 0.0 1107.0
CMS3_k127_7207093_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.415e-206 655.0
CMS3_k127_7207093_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003215 266.0
CMS3_k127_7207093_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001802 260.0
CMS3_k127_7207093_4 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000000000000000000000007423 219.0
CMS3_k127_7253833_0 Tetratricopeptide repeat - - - 6.567e-306 967.0
CMS3_k127_7253833_1 cell adhesion involved in biofilm formation - - - 3.972e-227 753.0
CMS3_k127_7253833_2 His Kinase A (phosphoacceptor) domain - - - 7.454e-220 698.0
CMS3_k127_7253833_3 Sigma-54 interaction domain - - - 1.305e-214 674.0
CMS3_k127_7253833_4 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 419.0
CMS3_k127_7253833_5 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 403.0
CMS3_k127_7253833_6 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000005261 213.0
CMS3_k127_7283839_0 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 485.0
CMS3_k127_7283839_1 - - - - 0.00000000000000002242 89.0
CMS3_k127_7313692_0 Asparagine synthase K01953 - 6.3.5.4 3.923e-298 927.0
CMS3_k127_7313692_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 2.397e-283 892.0
CMS3_k127_7313692_10 Belongs to the ATCase OTCase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 555.0
CMS3_k127_7313692_11 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 546.0
CMS3_k127_7313692_12 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 529.0
CMS3_k127_7313692_13 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 539.0
CMS3_k127_7313692_14 PFAM Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009985 444.0
CMS3_k127_7313692_15 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 403.0
CMS3_k127_7313692_16 PFAM chalcone and stilbene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 406.0
CMS3_k127_7313692_17 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 386.0
CMS3_k127_7313692_18 UbiA prenyltransferase family K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 375.0
CMS3_k127_7313692_19 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 371.0
CMS3_k127_7313692_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.722e-264 817.0
CMS3_k127_7313692_20 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 357.0
CMS3_k127_7313692_21 deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 321.0
CMS3_k127_7313692_22 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 330.0
CMS3_k127_7313692_23 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 319.0
CMS3_k127_7313692_24 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001256 275.0
CMS3_k127_7313692_25 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000001198 254.0
CMS3_k127_7313692_26 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000354 254.0
CMS3_k127_7313692_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 230.0
CMS3_k127_7313692_29 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000006175 209.0
CMS3_k127_7313692_3 PFAM GH3 auxin-responsive promoter - - - 1.013e-258 804.0
CMS3_k127_7313692_30 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000007182 212.0
CMS3_k127_7313692_31 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000002 200.0
CMS3_k127_7313692_32 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000003298 184.0
CMS3_k127_7313692_33 TIGRFAM export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000009854 158.0
CMS3_k127_7313692_34 - - - - 0.000000000000000000000000000000000000000008887 158.0
CMS3_k127_7313692_35 response regulator - - - 0.00000000000000000000000000007103 121.0
CMS3_k127_7313692_36 - - - - 0.000000000000000000000001976 110.0
CMS3_k127_7313692_37 FeoA K04758 - - 0.00000000000000000000001842 101.0
CMS3_k127_7313692_4 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.669e-250 790.0
CMS3_k127_7313692_5 Bacterial protein of unknown function (DUF885) - - - 3.574e-241 758.0
CMS3_k127_7313692_6 Belongs to the ompA family K03640 - - 8.604e-240 758.0
CMS3_k127_7313692_7 TonB dependent receptor K16087 - - 1.192e-216 696.0
CMS3_k127_7313692_8 single-stranded-DNA-specific exonuclease RecJ K07462 - - 4.765e-215 681.0
CMS3_k127_7313692_9 4Fe-4S dicluster domain - - - 1.047e-196 623.0
CMS3_k127_7339397_0 acyl-CoA dehydrogenase - - - 1.51e-206 646.0
CMS3_k127_7339397_1 PFAM Starch synthase catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 460.0
CMS3_k127_7339397_10 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000002834 198.0
CMS3_k127_7339397_11 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000000000000000000000000000000005757 195.0
CMS3_k127_7339397_12 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000007084 103.0
CMS3_k127_7339397_13 Domain of unknown function (DUF4270) - - - 0.00000000000005019 85.0
CMS3_k127_7339397_15 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00002905 52.0
CMS3_k127_7339397_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 445.0
CMS3_k127_7339397_3 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 353.0
CMS3_k127_7339397_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 308.0
CMS3_k127_7339397_5 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 306.0
CMS3_k127_7339397_6 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009931 307.0
CMS3_k127_7339397_7 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 298.0
CMS3_k127_7339397_8 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000109 280.0
CMS3_k127_7339397_9 PFAM WbqC-like protein family - - - 0.000000000000000000000000000000000000000000000000000000008135 205.0
CMS3_k127_7345890_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 559.0
CMS3_k127_7345890_1 AAA-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 391.0
CMS3_k127_7345890_2 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000001455 209.0
CMS3_k127_7382027_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 505.0
CMS3_k127_7382027_1 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000002461 255.0
CMS3_k127_7382027_2 PFAM Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000004363 196.0
CMS3_k127_7382027_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000002566 67.0
CMS3_k127_7391816_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 7.144e-243 764.0
CMS3_k127_7391816_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.744e-242 752.0
CMS3_k127_7391816_10 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 368.0
CMS3_k127_7391816_11 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 331.0
CMS3_k127_7391816_12 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 308.0
CMS3_k127_7391816_13 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 312.0
CMS3_k127_7391816_14 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 300.0
CMS3_k127_7391816_15 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 300.0
CMS3_k127_7391816_16 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 292.0
CMS3_k127_7391816_17 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 274.0
CMS3_k127_7391816_18 Protein of unknown function (DUF4254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003772 261.0
CMS3_k127_7391816_19 PFAM CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004354 265.0
CMS3_k127_7391816_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5.244e-230 721.0
CMS3_k127_7391816_20 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000000000000000000000000624 243.0
CMS3_k127_7391816_21 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000002406 242.0
CMS3_k127_7391816_22 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000761 233.0
CMS3_k127_7391816_23 - - - - 0.000000000000000000000000000000000000000000000000000000000002978 220.0
CMS3_k127_7391816_24 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001822 210.0
CMS3_k127_7391816_25 mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000005466 182.0
CMS3_k127_7391816_26 rod shape-determining protein MreD - - - 0.000000000000000000000000000000000000000000001968 170.0
CMS3_k127_7391816_27 PFAM 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000004034 126.0
CMS3_k127_7391816_28 - - - - 0.000000000000000000000000005539 116.0
CMS3_k127_7391816_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 1.247e-196 621.0
CMS3_k127_7391816_4 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 602.0
CMS3_k127_7391816_5 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 587.0
CMS3_k127_7391816_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 547.0
CMS3_k127_7391816_7 fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 535.0
CMS3_k127_7391816_8 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 520.0
CMS3_k127_7391816_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 433.0
CMS3_k127_7402887_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 1.159e-243 782.0
CMS3_k127_7402887_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 490.0
CMS3_k127_7402887_10 manually curated - - - 0.000000000000000000000000000000008641 127.0
CMS3_k127_7402887_12 Sec-independent protein translocase protein TatA K03116 - - 0.00000000000000000003281 92.0
CMS3_k127_7402887_13 SnoaL-like polyketide cyclase - - - 0.000000000000000007895 90.0
CMS3_k127_7402887_14 GldH lipoprotein - - - 0.000000000145 69.0
CMS3_k127_7402887_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 434.0
CMS3_k127_7402887_3 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 323.0
CMS3_k127_7402887_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 304.0
CMS3_k127_7402887_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000019 253.0
CMS3_k127_7402887_6 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000002666 237.0
CMS3_k127_7402887_7 PFAM peptidase M55 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000000000000000000000000511 206.0
CMS3_k127_7402887_8 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000002025 194.0
CMS3_k127_7402887_9 - - - - 0.00000000000000000000000000000000000000000001706 172.0
CMS3_k127_758142_0 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 539.0
CMS3_k127_758142_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 334.0
CMS3_k127_758142_2 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 239.0
CMS3_k127_758142_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000005178 213.0
CMS3_k127_758142_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000001972 197.0
CMS3_k127_758142_5 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000000000000000000000003581 188.0
CMS3_k127_758142_6 - - - - 0.0000000000000000000000000000000000000000000000001553 182.0
CMS3_k127_758142_7 - - - - 0.00000002456 59.0
CMS3_k127_793356_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1219.0
CMS3_k127_793356_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 6.437e-280 874.0
CMS3_k127_793356_10 PFAM Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 439.0
CMS3_k127_793356_11 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 428.0
CMS3_k127_793356_12 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 398.0
CMS3_k127_793356_13 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 397.0
CMS3_k127_793356_14 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 389.0
CMS3_k127_793356_15 Isopropylmalate homocitrate citramalate synthase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 375.0
CMS3_k127_793356_16 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 379.0
CMS3_k127_793356_17 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 369.0
CMS3_k127_793356_18 Serine dehydratase K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 363.0
CMS3_k127_793356_19 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009208 273.0
CMS3_k127_793356_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 1.674e-259 812.0
CMS3_k127_793356_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002245 274.0
CMS3_k127_793356_21 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007334 274.0
CMS3_k127_793356_22 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008951 267.0
CMS3_k127_793356_23 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009176 259.0
CMS3_k127_793356_24 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000008353 231.0
CMS3_k127_793356_25 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000001586 224.0
CMS3_k127_793356_26 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000005075 177.0
CMS3_k127_793356_27 - - - - 0.00000000000000000000000000000000000000000004034 171.0
CMS3_k127_793356_28 - - - - 0.0000000000000000000000000000000000000000001048 171.0
CMS3_k127_793356_29 - - - - 0.000000000000000000000000000000000000000003537 160.0
CMS3_k127_793356_3 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 1.203e-232 729.0
CMS3_k127_793356_30 Maf-like protein K06287 - - 0.0000000000000000000000000000001164 132.0
CMS3_k127_793356_32 - - - - 0.000000000000000000007193 104.0
CMS3_k127_793356_33 histone H1-like protein - - - 0.00000000000000000001615 91.0
CMS3_k127_793356_34 - - - - 0.0000000000000001223 86.0
CMS3_k127_793356_35 - - - - 0.000001979 56.0
CMS3_k127_793356_4 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 1.324e-210 660.0
CMS3_k127_793356_5 Protein of unknown function (DUF1015) - - - 1.51e-205 646.0
CMS3_k127_793356_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 588.0
CMS3_k127_793356_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 508.0
CMS3_k127_793356_8 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 463.0
CMS3_k127_793356_9 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 447.0
CMS3_k127_84361_0 lyase activity - - - 0.000000000000000000000000000000000000000004059 165.0
CMS3_k127_84361_1 Domain of unknown function (DUF3368) - - - 0.0000000000000000000000000000000000001542 147.0
CMS3_k127_84361_2 - - - - 0.000000000000000276 83.0
CMS3_k127_84361_3 Uncharacterised protein family (UPF0175) - - - 0.000000000001305 70.0
CMS3_k127_864167_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.443e-220 691.0
CMS3_k127_864167_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000005328 117.0
CMS3_k127_864167_2 Response regulator of the LytR AlgR family - - - 0.00000377 49.0
CMS3_k127_967269_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1872.0
CMS3_k127_967269_1 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1717.0
CMS3_k127_967269_10 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 385.0
CMS3_k127_967269_11 Beta-lactamase superfamily domain K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 383.0
CMS3_k127_967269_12 PFAM Aminotransferase, class IV K00824,K00826 - 2.6.1.21,2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 293.0
CMS3_k127_967269_13 membrane K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005327 252.0
CMS3_k127_967269_14 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004562 243.0
CMS3_k127_967269_15 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006735 232.0
CMS3_k127_967269_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000005726 221.0
CMS3_k127_967269_17 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000001498 223.0
CMS3_k127_967269_18 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000005667 229.0
CMS3_k127_967269_19 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000347 211.0
CMS3_k127_967269_2 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1091.0
CMS3_k127_967269_20 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000348 216.0
CMS3_k127_967269_21 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000001927 189.0
CMS3_k127_967269_22 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000002579 182.0
CMS3_k127_967269_23 - - - - 0.00000000000000000000002093 102.0
CMS3_k127_967269_24 phosphorelay signal transduction system - - - 0.00000000000000000004235 94.0
CMS3_k127_967269_25 Tellurite resistance protein TerB - - - 0.000000000000000002346 90.0
CMS3_k127_967269_3 MacB-like periplasmic core domain K02004 - - 0.0 1033.0
CMS3_k127_967269_4 Esterase of the alpha-beta hydrolase superfamily - - - 1.671e-277 874.0
CMS3_k127_967269_5 Belongs to the helicase family. UvrD subfamily - - - 4.143e-245 794.0
CMS3_k127_967269_6 PD-(D/E)XK nuclease superfamily - - - 2.776e-223 723.0
CMS3_k127_967269_7 PFAM Type III restriction enzyme, res subunit - - - 2.269e-208 667.0
CMS3_k127_967269_8 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 491.0
CMS3_k127_967269_9 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 436.0
CMS3_k127_974591_0 Sortilin, neurotensin receptor 3, - - - 0.0 1125.0
CMS3_k127_974591_1 WD40 repeats - - - 0.0 1034.0
CMS3_k127_974591_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
CMS3_k127_974591_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000004171 204.0
CMS3_k127_974591_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000001944 153.0
CMS3_k127_974591_13 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000206 151.0
CMS3_k127_974591_14 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000007565 141.0
CMS3_k127_974591_15 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000003864 120.0
CMS3_k127_974591_16 - - - - 0.0000000000000000000000008466 115.0
CMS3_k127_974591_17 membrane K06142 - - 0.000000000003067 74.0
CMS3_k127_974591_18 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.0000008976 61.0
CMS3_k127_974591_2 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 9.228e-317 1000.0
CMS3_k127_974591_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.297e-245 764.0
CMS3_k127_974591_4 sigma54 specific, transcriptional regulator, Fis family - - - 1.224e-197 623.0
CMS3_k127_974591_5 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 501.0
CMS3_k127_974591_6 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 510.0
CMS3_k127_974591_7 carbonic anhydrase acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004081 277.0
CMS3_k127_974591_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001183 269.0
CMS3_k127_974591_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000003739 238.0
CMS3_k127_99547_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1066.0
CMS3_k127_99547_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 4.124e-319 985.0
CMS3_k127_99547_10 - - - - 0.00000000001233 70.0
CMS3_k127_99547_2 Oxidoreductase - - - 1.825e-277 859.0
CMS3_k127_99547_3 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 267.0
CMS3_k127_99547_4 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000002667 220.0
CMS3_k127_99547_5 sequence-specific DNA binding K07506 - - 0.00000000000000000000000000000000000000000001838 168.0
CMS3_k127_99547_6 Domain of unknown function (DUF3471) - - - 0.000000000000000000000000000000000000000000779 162.0
CMS3_k127_99547_7 Acetyltransferase (GNAT) domain K09994 - - 0.0000000000000000000000000000000006207 136.0
CMS3_k127_99547_8 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000426 116.0
CMS3_k127_99547_9 PFAM Heavy-metal-associated domain - - - 0.000000000000000000000733 96.0