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Overview

ID MAG00543
Name CMS3_bin.50
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Kiloniellales
Family J153
Genus
Species
Assembly information
Completeness (%) 97.26
Contamination (%) 1.25
GC content (%) 69.0
N50 (bp) 31,432
Genome size (bp) 3,973,365

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3760

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1017799_0 Hydantoinase/oxoprolinase N-terminal region - - - 2.383e-298 929.0
CMS3_k127_1017799_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 5.051e-272 846.0
CMS3_k127_1017799_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000004195 239.0
CMS3_k127_1017799_11 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
CMS3_k127_1017799_12 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000002194 214.0
CMS3_k127_1017799_13 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
CMS3_k127_1017799_14 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000292 181.0
CMS3_k127_1017799_15 - - - - 0.000000000000000000000000000000000000000001436 160.0
CMS3_k127_1017799_16 positive regulation of growth - - - 0.000000000000006313 78.0
CMS3_k127_1017799_17 - - - - 0.00000089 51.0
CMS3_k127_1017799_18 positive regulation of growth - GO:0006417,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0040007,GO:0045727,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0080090,GO:2000112 - 0.000002293 52.0
CMS3_k127_1017799_2 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 581.0
CMS3_k127_1017799_3 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 531.0
CMS3_k127_1017799_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972 485.0
CMS3_k127_1017799_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 451.0
CMS3_k127_1017799_6 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 445.0
CMS3_k127_1017799_7 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 354.0
CMS3_k127_1017799_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006038 282.0
CMS3_k127_1017799_9 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002739 243.0
CMS3_k127_108955_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2421.0
CMS3_k127_108955_1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 - 1.4.1.13,1.4.1.14 2.764e-242 757.0
CMS3_k127_108955_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 463.0
CMS3_k127_108955_3 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 452.0
CMS3_k127_108955_4 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 407.0
CMS3_k127_108955_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 341.0
CMS3_k127_108955_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 340.0
CMS3_k127_108955_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 317.0
CMS3_k127_108955_8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007988 234.0
CMS3_k127_108955_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000006329 203.0
CMS3_k127_1109062_0 Bacterial NAD-glutamate dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0 1897.0
CMS3_k127_1109062_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1456.0
CMS3_k127_1109062_10 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 499.0
CMS3_k127_1109062_11 ubiquitin protein ligase binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 485.0
CMS3_k127_1109062_12 BFD-like [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 481.0
CMS3_k127_1109062_13 fad dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 413.0
CMS3_k127_1109062_14 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 413.0
CMS3_k127_1109062_15 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 385.0
CMS3_k127_1109062_16 Belongs to the bacterial solute-binding protein 3 family K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 381.0
CMS3_k127_1109062_17 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 379.0
CMS3_k127_1109062_18 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 342.0
CMS3_k127_1109062_19 VWA domain containing CoxE-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 342.0
CMS3_k127_1109062_2 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K03520 - 1.2.5.3 0.0 1328.0
CMS3_k127_1109062_20 Polar amino acid uptake family ABC transporter, permease protein K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 333.0
CMS3_k127_1109062_21 Polar amino acid uptake family ABC transporter, permease protein K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 329.0
CMS3_k127_1109062_22 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 326.0
CMS3_k127_1109062_23 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 291.0
CMS3_k127_1109062_24 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003037 266.0
CMS3_k127_1109062_25 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001752 263.0
CMS3_k127_1109062_26 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000001498 238.0
CMS3_k127_1109062_27 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000263 238.0
CMS3_k127_1109062_28 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000003441 228.0
CMS3_k127_1109062_29 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000008851 185.0
CMS3_k127_1109062_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 6.405e-318 989.0
CMS3_k127_1109062_30 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.000000000000000000000000000000000000132 153.0
CMS3_k127_1109062_31 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000729 139.0
CMS3_k127_1109062_32 COG1734 DnaK suppressor protein K06204 - - 0.0000000000000000000000000000001629 128.0
CMS3_k127_1109062_33 Sarcosine oxidase, delta subunit K00304,K22085 - 1.5.3.1,1.5.99.5 0.0000000000000000000000000000006636 127.0
CMS3_k127_1109062_34 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000001192 121.0
CMS3_k127_1109062_35 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000007624 118.0
CMS3_k127_1109062_37 Sarcosine oxidase, gamma subunit family K00305,K22087 - 1.5.3.1,1.5.99.5 0.0000000000001658 79.0
CMS3_k127_1109062_38 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000007463 72.0
CMS3_k127_1109062_39 Cytochrome C oxidase, cbb3-type, subunit III K18030 - 1.17.2.1 0.00002451 55.0
CMS3_k127_1109062_4 Glycine cleavage T-protein C-terminal barrel domain K00302,K22086 - 1.5.3.1,1.5.99.5 9.207e-309 976.0
CMS3_k127_1109062_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.021e-253 794.0
CMS3_k127_1109062_6 ABC transporter C-terminal domain K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 3.075e-247 782.0
CMS3_k127_1109062_7 TamB, inner membrane protein subunit of TAM complex K09800 - - 4.419e-211 709.0
CMS3_k127_1109062_8 FAD dependent oxidoreductase K22084 - 1.5.99.5 8.677e-200 629.0
CMS3_k127_1109062_9 Surface antigen K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 603.0
CMS3_k127_1159025_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1157.0
CMS3_k127_1159025_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 568.0
CMS3_k127_1159025_2 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 558.0
CMS3_k127_1159025_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 552.0
CMS3_k127_1159025_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 351.0
CMS3_k127_1159025_5 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000003647 260.0
CMS3_k127_1159025_6 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000001719 177.0
CMS3_k127_1159025_8 PFAM Resolvase, N-terminal - - - 0.00003513 57.0
CMS3_k127_1173306_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.62e-251 788.0
CMS3_k127_1173306_1 Cytochrome D1 heme domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 571.0
CMS3_k127_1173306_2 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000001097 167.0
CMS3_k127_1173306_3 PFAM cobalamin (vitamin B12) biosynthesis CbiX K03795 - 4.99.1.3 0.00000000001355 76.0
CMS3_k127_1203679_0 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.659e-249 775.0
CMS3_k127_1203679_1 Radical SAM K01012 - 2.8.1.6 3.173e-217 679.0
CMS3_k127_1203679_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001801 286.0
CMS3_k127_1203679_11 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000004758 227.0
CMS3_k127_1203679_12 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000005422 221.0
CMS3_k127_1203679_13 Glycine cleavage H-protein K02437 - - 0.000000000000000000000000000000000000000000000000000000000000001181 229.0
CMS3_k127_1203679_14 GMP synthase (glutamine-hydrolyzing) activity - - - 0.000000000000000000000000000000000000000000000000000000000002853 229.0
CMS3_k127_1203679_15 - - - - 0.0000000000000000000000000000000000000000002498 173.0
CMS3_k127_1203679_16 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000001383 149.0
CMS3_k127_1203679_17 FR47-like protein - - - 0.000000000000000000000000000000000001114 144.0
CMS3_k127_1203679_18 transcriptional regulators K22042 - - 0.0000000000000000000000000000005087 124.0
CMS3_k127_1203679_19 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000002827 70.0
CMS3_k127_1203679_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 527.0
CMS3_k127_1203679_3 Radical SAM K09711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 516.0
CMS3_k127_1203679_4 dihydropyrimidine dehydrogenase K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 507.0
CMS3_k127_1203679_5 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 454.0
CMS3_k127_1203679_6 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 430.0
CMS3_k127_1203679_7 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 396.0
CMS3_k127_1203679_8 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 361.0
CMS3_k127_1203679_9 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 331.0
CMS3_k127_1329193_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1454.0
CMS3_k127_1329193_1 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 9.01e-200 632.0
CMS3_k127_1329193_10 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001321 259.0
CMS3_k127_1329193_11 chorismate mutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002298 257.0
CMS3_k127_1329193_12 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000003051 265.0
CMS3_k127_1329193_13 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004625 240.0
CMS3_k127_1329193_14 Cell division protein K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000005656 246.0
CMS3_k127_1329193_15 Protein of unknown function (DUF1134) - - - 0.00000000000000000000000000000000000000000000000000000000000000000599 232.0
CMS3_k127_1329193_16 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000127 186.0
CMS3_k127_1329193_17 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000001204 146.0
CMS3_k127_1329193_18 nuclease - - - 0.00000000000000000000000000000000001564 141.0
CMS3_k127_1329193_19 transcriptional regulator - - - 0.000000000000000000000000000000004912 142.0
CMS3_k127_1329193_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 443.0
CMS3_k127_1329193_20 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000003289 129.0
CMS3_k127_1329193_21 Aminotransferase - - - 0.0000000000002271 77.0
CMS3_k127_1329193_22 NUDIX domain - - - 0.0000005678 57.0
CMS3_k127_1329193_3 prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 427.0
CMS3_k127_1329193_4 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 385.0
CMS3_k127_1329193_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 324.0
CMS3_k127_1329193_6 cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008757 325.0
CMS3_k127_1329193_7 hydrolase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 324.0
CMS3_k127_1329193_8 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001054 278.0
CMS3_k127_1329193_9 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008153 256.0
CMS3_k127_1331190_0 Sarcosine oxidase, gamma subunit family K19191 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 0.0 1199.0
CMS3_k127_1331190_1 FAD dependent oxidoreductase central domain - - - 2e-322 1004.0
CMS3_k127_1331190_10 ATPases associated with a variety of cellular activities K02000 - 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 473.0
CMS3_k127_1331190_11 Choline/ethanolamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 419.0
CMS3_k127_1331190_12 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 340.0
CMS3_k127_1331190_13 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 295.0
CMS3_k127_1331190_14 COG1349 Transcriptional regulators of sugar metabolism K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006981 278.0
CMS3_k127_1331190_15 Acetolactate synthase small K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008201 266.0
CMS3_k127_1331190_16 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000005719 178.0
CMS3_k127_1331190_17 shape-determining protein K03571 - - 0.0000000000000000000000000000000000000000000001283 173.0
CMS3_k127_1331190_18 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000001229 171.0
CMS3_k127_1331190_19 Protein of unknown function (DUF433) - - - 0.0000000000000000000000000005395 114.0
CMS3_k127_1331190_2 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 9.156e-294 912.0
CMS3_k127_1331190_20 - - - - 0.000000000000002283 78.0
CMS3_k127_1331190_21 - - - - 0.00000839 48.0
CMS3_k127_1331190_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 9.597e-272 842.0
CMS3_k127_1331190_4 COG0768 cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 4.272e-260 816.0
CMS3_k127_1331190_5 Binding-protein-dependent transport system inner membrane component K02001 - - 2.122e-252 802.0
CMS3_k127_1331190_6 Rod shape-determining protein MreB K03569 - - 7.554e-203 633.0
CMS3_k127_1331190_7 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 593.0
CMS3_k127_1331190_8 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 514.0
CMS3_k127_1331190_9 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 507.0
CMS3_k127_1353777_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 0.0 1005.0
CMS3_k127_1353777_1 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 535.0
CMS3_k127_1353777_10 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 398.0
CMS3_k127_1353777_11 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 396.0
CMS3_k127_1353777_12 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 388.0
CMS3_k127_1353777_13 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0008948,GO:0016787,GO:0016822,GO:0016823,GO:0016829,GO:0016830,GO:0016831,GO:0018773,GO:0031974,GO:0031981,GO:0034545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 355.0
CMS3_k127_1353777_14 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 369.0
CMS3_k127_1353777_15 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 355.0
CMS3_k127_1353777_16 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 349.0
CMS3_k127_1353777_17 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 345.0
CMS3_k127_1353777_18 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 337.0
CMS3_k127_1353777_19 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 328.0
CMS3_k127_1353777_2 Belongs to the radical SAM superfamily. PqqE family K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 524.0
CMS3_k127_1353777_20 FCD K13637 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 321.0
CMS3_k127_1353777_21 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 311.0
CMS3_k127_1353777_22 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000006471 251.0
CMS3_k127_1353777_23 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
CMS3_k127_1353777_24 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000775 210.0
CMS3_k127_1353777_25 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000009208 216.0
CMS3_k127_1353777_26 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000000000000000000000000000000006624 159.0
CMS3_k127_1353777_27 - - - - 0.00000000000000000000000000000000000003805 164.0
CMS3_k127_1353777_28 - - - - 0.00000000000000000000006438 106.0
CMS3_k127_1353777_29 - - - - 0.00000000000000002848 90.0
CMS3_k127_1353777_3 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 502.0
CMS3_k127_1353777_30 Protein of unknown function (DUF1289) K06938 - - 0.0000000000000007306 80.0
CMS3_k127_1353777_31 PFAM Mo-dependent nitrogenase - - - 0.00000000000001138 82.0
CMS3_k127_1353777_32 - - - - 0.000000457 55.0
CMS3_k127_1353777_4 Periplasmic binding protein K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 442.0
CMS3_k127_1353777_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 430.0
CMS3_k127_1353777_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 421.0
CMS3_k127_1353777_7 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 412.0
CMS3_k127_1353777_8 Cytochrome C oxidase subunit II, periplasmic domain K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 406.0
CMS3_k127_1353777_9 ABC transporter K02049,K15555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 417.0
CMS3_k127_13538_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 461.0
CMS3_k127_13538_1 - - - - 0.000000000000000000001114 102.0
CMS3_k127_13538_2 Leucine-rich repeat (LRR) protein - - - 0.000129 53.0
CMS3_k127_1357445_0 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 568.0
CMS3_k127_1357445_1 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 430.0
CMS3_k127_1357445_10 ubiE/COQ5 methyltransferase family - - - 0.00000001451 57.0
CMS3_k127_1357445_11 lipolytic protein G-D-S-L family - - - 0.00001206 47.0
CMS3_k127_1357445_2 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 362.0
CMS3_k127_1357445_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 359.0
CMS3_k127_1357445_4 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009016 272.0
CMS3_k127_1357445_5 - - - - 0.00000000000000000000000000000000000000000000000000001486 196.0
CMS3_k127_1357445_6 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000001055 182.0
CMS3_k127_1357445_7 - - - - 0.000000000000000000000000000002831 126.0
CMS3_k127_1357445_8 YCII-related domain K09780 - - 0.000000000000000000000000001047 115.0
CMS3_k127_1357445_9 Domain of unknown function (DUF1127) - - - 0.000000000002366 72.0
CMS3_k127_1418333_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 1.507e-297 936.0
CMS3_k127_1418333_1 Molecular chaperone. Has ATPase activity K04079 - - 7.961e-254 797.0
CMS3_k127_1418333_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000008037 249.0
CMS3_k127_1418333_11 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001385 248.0
CMS3_k127_1418333_12 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000000000006401 215.0
CMS3_k127_1418333_13 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000007918 184.0
CMS3_k127_1418333_14 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000009779 152.0
CMS3_k127_1418333_15 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.0000000000000000000000000000001145 145.0
CMS3_k127_1418333_16 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000001977 128.0
CMS3_k127_1418333_17 - - - - 0.0000000000000000000000008711 113.0
CMS3_k127_1418333_18 TIGRFAM death-on-curing family protein K07341 - - 0.000000001665 59.0
CMS3_k127_1418333_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 556.0
CMS3_k127_1418333_3 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 487.0
CMS3_k127_1418333_4 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 419.0
CMS3_k127_1418333_5 Binding-protein-dependent transport system inner membrane component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 399.0
CMS3_k127_1418333_6 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 411.0
CMS3_k127_1418333_7 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 319.0
CMS3_k127_1418333_8 Staphylococcal nuclease homologue - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007437 283.0
CMS3_k127_1418333_9 transcriptional regulator K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005883 252.0
CMS3_k127_1435196_0 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 468.0
CMS3_k127_1435196_1 Putative AphA-like transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000005762 200.0
CMS3_k127_1441423_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.476e-214 683.0
CMS3_k127_1441423_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 556.0
CMS3_k127_1441423_10 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000007296 260.0
CMS3_k127_1441423_11 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000003928 219.0
CMS3_k127_1441423_12 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000001677 190.0
CMS3_k127_1441423_13 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000006754 163.0
CMS3_k127_1441423_14 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000002364 158.0
CMS3_k127_1441423_15 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000002132 147.0
CMS3_k127_1441423_16 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000004397 150.0
CMS3_k127_1441423_17 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000004636 149.0
CMS3_k127_1441423_18 Phospholipid methyltransferase - - - 0.0000002746 53.0
CMS3_k127_1441423_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 552.0
CMS3_k127_1441423_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 541.0
CMS3_k127_1441423_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 519.0
CMS3_k127_1441423_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 477.0
CMS3_k127_1441423_6 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 360.0
CMS3_k127_1441423_7 DDE domain K07498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 299.0
CMS3_k127_1441423_8 COG4942 Membrane-bound metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008505 294.0
CMS3_k127_1441423_9 protein conserved in bacteria K09798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001445 271.0
CMS3_k127_1459753_0 COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases K02230 - 6.6.1.2 0.0 1799.0
CMS3_k127_1459753_1 ABC-type multidrug transport system ATPase and permease K02021 - - 2e-323 1013.0
CMS3_k127_1459753_10 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 505.0
CMS3_k127_1459753_11 COG0475 Kef-type K transport systems, membrane components K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 502.0
CMS3_k127_1459753_12 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 456.0
CMS3_k127_1459753_13 Cobalamin synthesis protein cobW C-terminal domain K02234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 460.0
CMS3_k127_1459753_14 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 447.0
CMS3_k127_1459753_15 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 434.0
CMS3_k127_1459753_16 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 380.0
CMS3_k127_1459753_17 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 389.0
CMS3_k127_1459753_18 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 398.0
CMS3_k127_1459753_19 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 369.0
CMS3_k127_1459753_2 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 9.219e-291 900.0
CMS3_k127_1459753_20 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 336.0
CMS3_k127_1459753_21 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 330.0
CMS3_k127_1459753_22 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 342.0
CMS3_k127_1459753_23 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 317.0
CMS3_k127_1459753_24 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 307.0
CMS3_k127_1459753_25 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 300.0
CMS3_k127_1459753_26 Belongs to the MT-A70-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004012 278.0
CMS3_k127_1459753_27 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005739 299.0
CMS3_k127_1459753_28 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001782 280.0
CMS3_k127_1459753_29 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
CMS3_k127_1459753_3 acetylesterase activity - - - 1.657e-207 655.0
CMS3_k127_1459753_30 Restriction endonuclease BglII - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002008 269.0
CMS3_k127_1459753_31 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006772 267.0
CMS3_k127_1459753_32 Glycosyl transferase group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004544 261.0
CMS3_k127_1459753_33 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000385 237.0
CMS3_k127_1459753_34 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000000000000000000001031 216.0
CMS3_k127_1459753_35 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000002843 214.0
CMS3_k127_1459753_36 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000002206 210.0
CMS3_k127_1459753_37 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000003522 218.0
CMS3_k127_1459753_38 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000005805 220.0
CMS3_k127_1459753_39 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000001583 201.0
CMS3_k127_1459753_4 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 5.894e-199 633.0
CMS3_k127_1459753_40 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000189 219.0
CMS3_k127_1459753_41 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000000000000008523 223.0
CMS3_k127_1459753_42 S-adenosyl-L-methionine methyltransferase - - - 0.000000000000000000000000000000000000000000000000000001659 203.0
CMS3_k127_1459753_43 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000002067 193.0
CMS3_k127_1459753_44 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000002481 211.0
CMS3_k127_1459753_45 S-adenosyl-L-methionine methyltransferase - - - 0.000000000000000000000000000000000000000000000004294 177.0
CMS3_k127_1459753_46 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000002514 172.0
CMS3_k127_1459753_47 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.000000000000000000000000000000000000005285 152.0
CMS3_k127_1459753_48 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000002615 139.0
CMS3_k127_1459753_49 Staphylococcal nuclease homologue - - - 0.0000000000000000000000000000004298 128.0
CMS3_k127_1459753_5 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 609.0
CMS3_k127_1459753_50 PFAM NapC NirT cytochrome c K03532 - - 0.0000000000000000000000000001432 126.0
CMS3_k127_1459753_51 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.000000000000000000000000004321 126.0
CMS3_k127_1459753_52 - - - - 0.000000000000000000000000006172 125.0
CMS3_k127_1459753_53 amine dehydrogenase activity - - - 0.000000000000000000000000207 119.0
CMS3_k127_1459753_54 Phage integrase family - - - 0.00000000000000000000003767 101.0
CMS3_k127_1459753_55 - - - - 0.00000000000000000005805 94.0
CMS3_k127_1459753_56 Protein of unknown function (DUF3489) - - - 0.000000000000005914 78.0
CMS3_k127_1459753_57 Rv0623-like transcription factor K19687 GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.0000000000004962 72.0
CMS3_k127_1459753_58 recombinase activity - - - 0.000000000005332 73.0
CMS3_k127_1459753_59 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000004857 57.0
CMS3_k127_1459753_6 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 597.0
CMS3_k127_1459753_60 Lytic murein transglycosylase K08305 - - 0.00008768 54.0
CMS3_k127_1459753_7 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 567.0
CMS3_k127_1459753_8 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 558.0
CMS3_k127_1459753_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 517.0
CMS3_k127_1470041_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 571.0
CMS3_k127_1470041_1 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000001228 218.0
CMS3_k127_1510103_0 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1168.0
CMS3_k127_1510103_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.487e-253 801.0
CMS3_k127_1510103_2 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 537.0
CMS3_k127_1510103_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 451.0
CMS3_k127_1510103_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 423.0
CMS3_k127_1510103_5 COG0616 periplasmic serine proteases (ClpP class) K04773,K04774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 317.0
CMS3_k127_1510103_6 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 288.0
CMS3_k127_1510103_7 GTA TIM-barrel-like domain - - - 0.00000000000000000000000000001021 122.0
CMS3_k127_1510103_8 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000001038 108.0
CMS3_k127_1510103_9 - - - - 0.0000000000000001001 83.0
CMS3_k127_151615_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 1.878e-296 919.0
CMS3_k127_151615_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.365e-262 815.0
CMS3_k127_151615_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 346.0
CMS3_k127_151615_11 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 338.0
CMS3_k127_151615_12 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000539 264.0
CMS3_k127_151615_13 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005541 273.0
CMS3_k127_151615_14 Acetolactate synthase small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000009573 252.0
CMS3_k127_151615_15 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002095 270.0
CMS3_k127_151615_16 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000003716 192.0
CMS3_k127_151615_17 Stringent starvation protein B K09985 - - 0.00000000000000000000000000000000000000000000000004145 184.0
CMS3_k127_151615_18 Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000002413 171.0
CMS3_k127_151615_19 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000001734 134.0
CMS3_k127_151615_2 Rod shape-determining protein MreB K03569 - - 8.092e-194 607.0
CMS3_k127_151615_20 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000427 106.0
CMS3_k127_151615_21 TfoX N-terminal domain K07343 - - 0.000000000000000000000006492 111.0
CMS3_k127_151615_22 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000005527 87.0
CMS3_k127_151615_23 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000000000007183 92.0
CMS3_k127_151615_24 Putative addiction module component - - - 0.0000000000001612 73.0
CMS3_k127_151615_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 613.0
CMS3_k127_151615_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 556.0
CMS3_k127_151615_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 532.0
CMS3_k127_151615_6 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 485.0
CMS3_k127_151615_7 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 460.0
CMS3_k127_151615_8 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 442.0
CMS3_k127_151615_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 386.0
CMS3_k127_1533903_0 Uncharacterized protein family (UPF0051) K09014 - - 1.866e-275 852.0
CMS3_k127_1533903_1 Aminotransferase - - - 3.351e-197 625.0
CMS3_k127_1533903_10 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000009515 208.0
CMS3_k127_1533903_11 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000004211 188.0
CMS3_k127_1533903_12 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000417 181.0
CMS3_k127_1533903_13 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000003311 181.0
CMS3_k127_1533903_14 Cytochrome P460 - - - 0.00000000000000000000000000000000000000003232 167.0
CMS3_k127_1533903_15 FeS assembly SUF system protein - - - 0.000000000000000000000000000000000000001075 160.0
CMS3_k127_1533903_16 FAD binding domain - - - 0.000000000000000000000000000008648 120.0
CMS3_k127_1533903_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 592.0
CMS3_k127_1533903_3 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 431.0
CMS3_k127_1533903_4 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 397.0
CMS3_k127_1533903_5 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 388.0
CMS3_k127_1533903_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 358.0
CMS3_k127_1533903_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 324.0
CMS3_k127_1533903_8 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006617 319.0
CMS3_k127_1533903_9 Protein of unknown function (DUF1194) - - - 0.0000000000000000000000000000000000000000000000000000000000177 215.0
CMS3_k127_1562569_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 442.0
CMS3_k127_1562569_1 Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) K05774 - 2.7.4.23 0.000000000000000000000000000000000000000000000000816 181.0
CMS3_k127_1562569_2 - - - - 0.00000007443 57.0
CMS3_k127_158762_0 Threonine synthase K01733 - 4.2.3.1 2.531e-198 629.0
CMS3_k127_158762_1 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 546.0
CMS3_k127_158762_2 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 402.0
CMS3_k127_158762_3 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008628 260.0
CMS3_k127_158762_4 transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005432 256.0
CMS3_k127_158762_5 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000001713 254.0
CMS3_k127_158762_6 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000003557 229.0
CMS3_k127_158762_7 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000000007378 141.0
CMS3_k127_158762_8 - - - - 0.000000000000000004404 90.0
CMS3_k127_1588131_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system large permease component - - - 7.339e-224 708.0
CMS3_k127_1588131_1 Bacterial extracellular solute-binding protein, family 7 - - - 5.372e-202 632.0
CMS3_k127_1588131_10 COG1278 Cold shock proteins K03704 - - 0.00000000000000000000000003145 113.0
CMS3_k127_1588131_11 PAS domain - - - 0.00000000000000000000000356 112.0
CMS3_k127_1588131_12 response regulator, receiver K07216,K07814 - - 0.000000000000003105 81.0
CMS3_k127_1588131_13 PFAM TPR repeat-containing protein - - - 0.0000000002481 73.0
CMS3_k127_1588131_14 cell septum assembly - - - 0.00000001256 67.0
CMS3_k127_1588131_2 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 496.0
CMS3_k127_1588131_3 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 406.0
CMS3_k127_1588131_4 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 358.0
CMS3_k127_1588131_5 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 299.0
CMS3_k127_1588131_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000219 260.0
CMS3_k127_1588131_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000002111 239.0
CMS3_k127_1588131_8 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000009967 221.0
CMS3_k127_1588131_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001004 207.0
CMS3_k127_162298_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019464,GO:0019752,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.4.2 0.0 1349.0
CMS3_k127_162298_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1162.0
CMS3_k127_162298_10 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001345 239.0
CMS3_k127_162298_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000002062 231.0
CMS3_k127_162298_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000001037 219.0
CMS3_k127_162298_13 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000003147 209.0
CMS3_k127_162298_14 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000002755 179.0
CMS3_k127_162298_15 spore germination - - - 0.0000000000000000000000000000000000000000000004758 178.0
CMS3_k127_162298_16 PFAM pentapeptide repeat protein - - - 0.000000000000000000000000000000000000004392 163.0
CMS3_k127_162298_17 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000008491 160.0
CMS3_k127_162298_18 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000001421 154.0
CMS3_k127_162298_19 CDGSH-type zinc finger. Function unknown. - - - 0.000000000000000000000000000000000204 133.0
CMS3_k127_162298_2 Adenylate and Guanylate cyclase catalytic domain - - - 3.654e-208 687.0
CMS3_k127_162298_20 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000004329 134.0
CMS3_k127_162298_21 - - - - 0.0000000000000000000000000001942 124.0
CMS3_k127_162298_22 - - - - 0.0000000000000000000000000002022 124.0
CMS3_k127_162298_23 Protein of unknown function (DUF721) - - - 0.000000000000000000000000005672 117.0
CMS3_k127_162298_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000121 109.0
CMS3_k127_162298_25 - - - - 0.0000000000000000000000002 113.0
CMS3_k127_162298_26 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000000000000000001116 102.0
CMS3_k127_162298_27 DNA-binding transcription factor activity - - - 0.0000000211 61.0
CMS3_k127_162298_28 Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.000006735 53.0
CMS3_k127_162298_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 517.0
CMS3_k127_162298_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 477.0
CMS3_k127_162298_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 467.0
CMS3_k127_162298_6 COG1194 A G-specific DNA glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 408.0
CMS3_k127_162298_7 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 359.0
CMS3_k127_162298_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 322.0
CMS3_k127_162298_9 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 308.0
CMS3_k127_1642094_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 7.118e-277 854.0
CMS3_k127_1642094_1 peptidase U62, modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 477.0
CMS3_k127_1642094_2 Protein of unknown function (DUF3422) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 443.0
CMS3_k127_1642094_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 346.0
CMS3_k127_182094_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296 - - 0.0 1525.0
CMS3_k127_182094_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 4.282e-309 953.0
CMS3_k127_182094_10 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 595.0
CMS3_k127_182094_11 PFAM type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 574.0
CMS3_k127_182094_12 imidazolonepropionase activity K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 538.0
CMS3_k127_182094_13 Amidohydrolase family K05603 - 3.5.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 508.0
CMS3_k127_182094_14 Bacterial extracellular solute-binding protein, family 7 K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 457.0
CMS3_k127_182094_15 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 449.0
CMS3_k127_182094_16 CHASE2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 454.0
CMS3_k127_182094_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 428.0
CMS3_k127_182094_18 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 442.0
CMS3_k127_182094_19 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 417.0
CMS3_k127_182094_2 belongs to the aldehyde dehydrogenase family - - - 2.956e-262 813.0
CMS3_k127_182094_20 Choline kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 394.0
CMS3_k127_182094_21 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 379.0
CMS3_k127_182094_22 racemase activity, acting on amino acids and derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 346.0
CMS3_k127_182094_23 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 342.0
CMS3_k127_182094_24 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 358.0
CMS3_k127_182094_25 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 329.0
CMS3_k127_182094_26 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 324.0
CMS3_k127_182094_27 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 307.0
CMS3_k127_182094_28 nitrate reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 290.0
CMS3_k127_182094_29 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005406 287.0
CMS3_k127_182094_3 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 4.952e-254 812.0
CMS3_k127_182094_30 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001734 256.0
CMS3_k127_182094_31 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009547 260.0
CMS3_k127_182094_32 transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000001103 241.0
CMS3_k127_182094_33 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000001189 232.0
CMS3_k127_182094_34 Cobalamin synthesis protein P47K - - - 0.000000000000000000000000000000000000000000000000000000000005008 227.0
CMS3_k127_182094_35 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000005662 210.0
CMS3_k127_182094_36 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000407 209.0
CMS3_k127_182094_37 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000005417 186.0
CMS3_k127_182094_38 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.000000000000000000000000000000000000000000006966 172.0
CMS3_k127_182094_39 FecR protein - - - 0.0000000000000000000000000000000000000006029 160.0
CMS3_k127_182094_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.087e-248 779.0
CMS3_k127_182094_40 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000001053 151.0
CMS3_k127_182094_41 Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin K04085 - - 0.00000000000000000000000000000068 122.0
CMS3_k127_182094_42 PFAM regulatory protein ArsR - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000003016 124.0
CMS3_k127_182094_43 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000006726 132.0
CMS3_k127_182094_44 Radical SAM K09711 - - 0.0000000000000000004702 90.0
CMS3_k127_182094_45 - - - - 0.000000000000000005592 89.0
CMS3_k127_182094_46 amine dehydrogenase activity - - - 0.00001335 59.0
CMS3_k127_182094_47 cellulase activity - - - 0.00003056 57.0
CMS3_k127_182094_5 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 8.387e-223 710.0
CMS3_k127_182094_6 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 2.144e-219 688.0
CMS3_k127_182094_7 Tripartite ATP-independent periplasmic transporter, DctM component K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 2.549e-214 673.0
CMS3_k127_182094_8 Amidohydrolase family - - - 2.258e-211 677.0
CMS3_k127_182094_9 FAD dependent oxidoreductase K00285 - 1.4.5.1 8.594e-194 614.0
CMS3_k127_1860512_0 Extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000009992 237.0
CMS3_k127_1860512_1 EamA-like transporter family - - - 0.000000004782 63.0
CMS3_k127_1892566_0 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009891 571.0
CMS3_k127_1892566_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 552.0
CMS3_k127_1892566_10 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000006514 214.0
CMS3_k127_1892566_11 Universal stress protein - - - 0.00000000000000000000000000000000000000001303 165.0
CMS3_k127_1892566_12 COG1846 Transcriptional regulators - - - 0.000000000000000000000000000000000001973 141.0
CMS3_k127_1892566_13 Belongs to the ompA family - - - 0.00000000000000000000000000003924 126.0
CMS3_k127_1892566_14 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000000000000000006395 121.0
CMS3_k127_1892566_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 515.0
CMS3_k127_1892566_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 428.0
CMS3_k127_1892566_4 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 417.0
CMS3_k127_1892566_5 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009039 385.0
CMS3_k127_1892566_6 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 327.0
CMS3_k127_1892566_7 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001992 267.0
CMS3_k127_1892566_8 AzlC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001919 257.0
CMS3_k127_1892566_9 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000003058 258.0
CMS3_k127_1905647_0 Malonyl-CoA decarboxylase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 557.0
CMS3_k127_1905647_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 534.0
CMS3_k127_1905647_2 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 466.0
CMS3_k127_1905647_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 361.0
CMS3_k127_1905647_4 Formate/nitrite transporter K21993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 295.0
CMS3_k127_1917280_0 Belongs to the GcvT family - - - 0.0 1109.0
CMS3_k127_1917280_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 0.0 1102.0
CMS3_k127_1917280_10 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375,K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 564.0
CMS3_k127_1917280_11 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 558.0
CMS3_k127_1917280_12 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 549.0
CMS3_k127_1917280_13 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 537.0
CMS3_k127_1917280_14 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 495.0
CMS3_k127_1917280_15 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 467.0
CMS3_k127_1917280_16 Branched-chain amino acid transport system permease K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 459.0
CMS3_k127_1917280_17 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 457.0
CMS3_k127_1917280_18 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 467.0
CMS3_k127_1917280_19 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 455.0
CMS3_k127_1917280_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00612 - - 6.935e-313 967.0
CMS3_k127_1917280_20 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 454.0
CMS3_k127_1917280_21 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 454.0
CMS3_k127_1917280_22 amino acid K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 421.0
CMS3_k127_1917280_23 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 381.0
CMS3_k127_1917280_24 Amino-transferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 367.0
CMS3_k127_1917280_25 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 360.0
CMS3_k127_1917280_26 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 354.0
CMS3_k127_1917280_27 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 379.0
CMS3_k127_1917280_28 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 333.0
CMS3_k127_1917280_29 ABC transporter K15600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005922 283.0
CMS3_k127_1917280_3 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 1.175e-266 842.0
CMS3_k127_1917280_30 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001694 280.0
CMS3_k127_1917280_31 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000014 268.0
CMS3_k127_1917280_32 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003536 261.0
CMS3_k127_1917280_33 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006452 249.0
CMS3_k127_1917280_34 Protein of unknown function, DUF599 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001062 241.0
CMS3_k127_1917280_35 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000000000000000000000000000000000000871 226.0
CMS3_k127_1917280_36 HAD-superfamily hydrolase subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000001385 240.0
CMS3_k127_1917280_37 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000005116 199.0
CMS3_k127_1917280_38 - - - - 0.00000000000000000000000000000000000000001583 168.0
CMS3_k127_1917280_39 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000002714 147.0
CMS3_k127_1917280_4 Potassium transporter peripheral membrane component K03499 - - 8.498e-231 721.0
CMS3_k127_1917280_40 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000004418 159.0
CMS3_k127_1917280_41 - - - - 0.0000000000000000000000000000000000005023 145.0
CMS3_k127_1917280_42 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000001881 156.0
CMS3_k127_1917280_43 - - - - 0.0000000000000000000141 96.0
CMS3_k127_1917280_44 - - - - 0.0000000000000001641 79.0
CMS3_k127_1917280_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 3.946e-229 721.0
CMS3_k127_1917280_6 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 1.275e-200 634.0
CMS3_k127_1917280_7 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 602.0
CMS3_k127_1917280_8 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 563.0
CMS3_k127_1917280_9 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 567.0
CMS3_k127_193242_0 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1364.0
CMS3_k127_193242_1 FAD dependent oxidoreductase central domain - - - 0.0 1164.0
CMS3_k127_193242_10 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008407 461.0
CMS3_k127_193242_11 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 471.0
CMS3_k127_193242_12 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 445.0
CMS3_k127_193242_13 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 375.0
CMS3_k127_193242_14 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 378.0
CMS3_k127_193242_15 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 396.0
CMS3_k127_193242_16 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 357.0
CMS3_k127_193242_17 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 361.0
CMS3_k127_193242_18 Pilus assembly protein K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 355.0
CMS3_k127_193242_19 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 348.0
CMS3_k127_193242_2 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 2.171e-281 872.0
CMS3_k127_193242_20 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 355.0
CMS3_k127_193242_21 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 306.0
CMS3_k127_193242_22 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 294.0
CMS3_k127_193242_23 type II secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001005 293.0
CMS3_k127_193242_24 Pilus assembly protein K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005573 276.0
CMS3_k127_193242_25 Transcriptional regulator, gntR family K11475 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001404 269.0
CMS3_k127_193242_26 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 254.0
CMS3_k127_193242_27 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000008277 249.0
CMS3_k127_193242_28 COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000001128 234.0
CMS3_k127_193242_29 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000001447 238.0
CMS3_k127_193242_3 Acetyl propionyl-CoA carboxylase alpha subunit K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 3.886e-270 846.0
CMS3_k127_193242_30 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002675 231.0
CMS3_k127_193242_31 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.0000000000000000000000000000000000000000000000000000000002866 213.0
CMS3_k127_193242_32 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000009725 184.0
CMS3_k127_193242_33 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000001253 154.0
CMS3_k127_193242_34 - - - - 0.000000000000000000000000000000000000004454 151.0
CMS3_k127_193242_35 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000006677 155.0
CMS3_k127_193242_36 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.00000000000000000000000000000000000003368 160.0
CMS3_k127_193242_37 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000001635 134.0
CMS3_k127_193242_38 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000001414 147.0
CMS3_k127_193242_39 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000000000001483 121.0
CMS3_k127_193242_4 Trimethylamine methyltransferase (MTTB) - - - 1.37e-230 724.0
CMS3_k127_193242_40 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000271 124.0
CMS3_k127_193242_41 Flp Fap pilin component K02651 - - 0.00000000000261 68.0
CMS3_k127_193242_42 Pilus biogenesis CpaD protein (pilus_cpaD) K02281 - - 0.0000004668 61.0
CMS3_k127_193242_43 Type IV leader peptidase family K02278 - 3.4.23.43 0.000001334 57.0
CMS3_k127_193242_44 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000003062 60.0
CMS3_k127_193242_45 PAS domain - - - 0.00003483 55.0
CMS3_k127_193242_5 pilus assembly protein ATPase CpaF K02283 - - 8.035e-213 674.0
CMS3_k127_193242_6 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 608.0
CMS3_k127_193242_7 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 604.0
CMS3_k127_193242_8 chorismate binding enzyme K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888 599.0
CMS3_k127_193242_9 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 596.0
CMS3_k127_1948068_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.201e-230 722.0
CMS3_k127_1948068_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.632e-211 659.0
CMS3_k127_1948068_2 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 373.0
CMS3_k127_1948068_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 338.0
CMS3_k127_1948068_4 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007563 249.0
CMS3_k127_1948068_5 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000004732 172.0
CMS3_k127_1948068_6 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01739 - 2.5.1.48 0.0003688 44.0
CMS3_k127_1955735_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1024.0
CMS3_k127_1955735_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.007e-303 934.0
CMS3_k127_1955735_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 462.0
CMS3_k127_1955735_11 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 464.0
CMS3_k127_1955735_12 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 366.0
CMS3_k127_1955735_13 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 303.0
CMS3_k127_1955735_14 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009008 258.0
CMS3_k127_1955735_15 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.0000000000000000000000000000000000000000000000000000000000000006235 221.0
CMS3_k127_1955735_16 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002894 207.0
CMS3_k127_1955735_17 helix_turn_helix, mercury resistance K19591 - - 0.000000000000000000000000000000000000000000000002336 187.0
CMS3_k127_1955735_18 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000002092 161.0
CMS3_k127_1955735_19 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000001133 149.0
CMS3_k127_1955735_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.413e-241 752.0
CMS3_k127_1955735_20 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000000000000006673 124.0
CMS3_k127_1955735_21 - - - - 0.00000000000000000000000000001265 119.0
CMS3_k127_1955735_22 Septum formation initiator - - - 0.000000000000000000000000001969 115.0
CMS3_k127_1955735_23 - - - - 0.00000000000000002848 87.0
CMS3_k127_1955735_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 6.572e-218 698.0
CMS3_k127_1955735_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.995e-209 672.0
CMS3_k127_1955735_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 5.638e-208 655.0
CMS3_k127_1955735_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 511.0
CMS3_k127_1955735_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 507.0
CMS3_k127_1955735_8 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 509.0
CMS3_k127_1955735_9 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 464.0
CMS3_k127_1985015_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 531.0
CMS3_k127_1985015_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 497.0
CMS3_k127_1985015_10 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000000002765 192.0
CMS3_k127_1985015_11 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.0000000000000000000000000000000002686 135.0
CMS3_k127_1985015_12 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000004682 141.0
CMS3_k127_1985015_13 O-Antigen ligase - - - 0.000000001708 69.0
CMS3_k127_1985015_14 oxygen carrier activity K07216 - - 0.000001477 56.0
CMS3_k127_1985015_15 Phasin protein - - - 0.0001999 50.0
CMS3_k127_1985015_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 488.0
CMS3_k127_1985015_3 sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 419.0
CMS3_k127_1985015_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 396.0
CMS3_k127_1985015_5 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 334.0
CMS3_k127_1985015_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 311.0
CMS3_k127_1985015_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005107 284.0
CMS3_k127_1985015_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004299 250.0
CMS3_k127_1985015_9 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000002 206.0
CMS3_k127_2001201_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 1.788e-277 863.0
CMS3_k127_2001201_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.009e-230 753.0
CMS3_k127_2001201_10 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 410.0
CMS3_k127_2001201_11 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 407.0
CMS3_k127_2001201_12 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 408.0
CMS3_k127_2001201_13 short-chain dehydrogenase reductase SDR K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 367.0
CMS3_k127_2001201_14 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 377.0
CMS3_k127_2001201_15 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 358.0
CMS3_k127_2001201_16 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 353.0
CMS3_k127_2001201_17 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 353.0
CMS3_k127_2001201_18 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 322.0
CMS3_k127_2001201_19 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 319.0
CMS3_k127_2001201_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 8.113e-207 650.0
CMS3_k127_2001201_20 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 313.0
CMS3_k127_2001201_21 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 286.0
CMS3_k127_2001201_22 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000000000000008485 227.0
CMS3_k127_2001201_23 - - - - 0.0000000000000000000000000000000000000000000000000000000000001986 226.0
CMS3_k127_2001201_24 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000003653 207.0
CMS3_k127_2001201_25 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001483 190.0
CMS3_k127_2001201_26 membrane protein, required for colicin V production K03558 - - 0.0000000000000000000000000000000000000000000209 184.0
CMS3_k127_2001201_27 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000008864 134.0
CMS3_k127_2001201_28 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000125 133.0
CMS3_k127_2001201_29 Cytochrome b/b6/petB K12262 - - 0.0000000000000000000000000000000005617 138.0
CMS3_k127_2001201_3 esterase lipase - - - 5.128e-205 688.0
CMS3_k127_2001201_30 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000002206 115.0
CMS3_k127_2001201_31 Dodecin K09165 - - 0.00000000000004296 71.0
CMS3_k127_2001201_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 5.176e-196 624.0
CMS3_k127_2001201_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 8.114e-196 622.0
CMS3_k127_2001201_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 626.0
CMS3_k127_2001201_7 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 593.0
CMS3_k127_2001201_8 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 421.0
CMS3_k127_2001201_9 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 420.0
CMS3_k127_2024367_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1027.0
CMS3_k127_2024367_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 477.0
CMS3_k127_2024367_10 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000002372 115.0
CMS3_k127_2024367_11 EamA-like transporter family - - - 0.0000000000000000002772 98.0
CMS3_k127_2024367_12 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000008775 93.0
CMS3_k127_2024367_13 Sel1 domain protein repeat-containing protein K07126,K13582 - - 0.000000000000001196 87.0
CMS3_k127_2024367_14 - - - - 0.000000000005559 76.0
CMS3_k127_2024367_2 MlrC C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 480.0
CMS3_k127_2024367_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 444.0
CMS3_k127_2024367_4 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 327.0
CMS3_k127_2024367_5 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001487 285.0
CMS3_k127_2024367_6 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000003061 253.0
CMS3_k127_2024367_7 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000002315 205.0
CMS3_k127_2024367_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000004707 172.0
CMS3_k127_2024367_9 localization factor protein PodJ K07126,K13582 - - 0.000000000000000000000000005878 123.0
CMS3_k127_2061980_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 8.793e-258 824.0
CMS3_k127_2061980_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.572e-208 653.0
CMS3_k127_2061980_10 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 324.0
CMS3_k127_2061980_11 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 302.0
CMS3_k127_2061980_12 Involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007368 274.0
CMS3_k127_2061980_13 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000003587 267.0
CMS3_k127_2061980_14 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004985 241.0
CMS3_k127_2061980_15 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000000000000000000001799 229.0
CMS3_k127_2061980_16 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000001224 209.0
CMS3_k127_2061980_17 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.00000000000000000000000000000000000000000000000000000006677 199.0
CMS3_k127_2061980_18 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000004449 196.0
CMS3_k127_2061980_19 Protein of unknown function (DUF3035) - - - 0.0000000000000000000000000000000000000000000000005483 181.0
CMS3_k127_2061980_2 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 9.16e-208 658.0
CMS3_k127_2061980_20 Protein of unknown function (DUF3775) - - - 0.00000000000000000000000000088 118.0
CMS3_k127_2061980_21 protein containing LysM domain - - - 0.000000000006178 79.0
CMS3_k127_2061980_22 PFAM Sporulation domain protein - - - 0.000000000006872 78.0
CMS3_k127_2061980_23 peptidoglycan binding K02520,K03749,K06204,K07126,K16291 - - 0.000000303 64.0
CMS3_k127_2061980_3 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 602.0
CMS3_k127_2061980_4 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 567.0
CMS3_k127_2061980_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 560.0
CMS3_k127_2061980_6 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 521.0
CMS3_k127_2061980_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 424.0
CMS3_k127_2061980_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 370.0
CMS3_k127_2061980_9 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 330.0
CMS3_k127_2103600_0 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 7.192e-260 813.0
CMS3_k127_2103600_1 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 3.129e-252 807.0
CMS3_k127_2103600_10 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000000000004601 126.0
CMS3_k127_2103600_11 Ribbon-helix-helix domain - - - 0.000000000000000000000003244 107.0
CMS3_k127_2103600_2 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 577.0
CMS3_k127_2103600_3 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 423.0
CMS3_k127_2103600_4 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003414 243.0
CMS3_k127_2103600_5 MFS_1 like family - - - 0.00000000000000000000000000000000000000000000000000000000000003041 229.0
CMS3_k127_2103600_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003833 216.0
CMS3_k127_2103600_7 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000001918 218.0
CMS3_k127_2103600_8 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000001646 194.0
CMS3_k127_2103600_9 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000003324 148.0
CMS3_k127_2105473_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 7.992e-265 825.0
CMS3_k127_2105473_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 7.799e-237 751.0
CMS3_k127_2105473_10 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 519.0
CMS3_k127_2105473_11 Polyphosphate kinase 2 (PPK2) K22468 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0044237 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 489.0
CMS3_k127_2105473_12 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 502.0
CMS3_k127_2105473_13 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 510.0
CMS3_k127_2105473_14 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 469.0
CMS3_k127_2105473_15 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 464.0
CMS3_k127_2105473_16 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 462.0
CMS3_k127_2105473_17 Glycosyl transferases group 1 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 490.0
CMS3_k127_2105473_18 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 450.0
CMS3_k127_2105473_19 N-terminal TM domain of oligopeptide transport permease C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 444.0
CMS3_k127_2105473_2 ABC-Type Dipeptide Transport System Periplasmic Component K02035 - - 1.384e-230 730.0
CMS3_k127_2105473_20 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 441.0
CMS3_k127_2105473_21 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 - 1.1.1.132,1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 431.0
CMS3_k127_2105473_22 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 423.0
CMS3_k127_2105473_23 PFAM pentapeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 419.0
CMS3_k127_2105473_24 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 369.0
CMS3_k127_2105473_25 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 357.0
CMS3_k127_2105473_26 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 355.0
CMS3_k127_2105473_27 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 351.0
CMS3_k127_2105473_28 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 310.0
CMS3_k127_2105473_29 Glycosyl transferase, family 2 K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 327.0
CMS3_k127_2105473_3 ABC-type dipeptide transport system periplasmic component K02035 - - 1.957e-228 717.0
CMS3_k127_2105473_30 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009996 295.0
CMS3_k127_2105473_31 LysR substrate binding domain K21645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
CMS3_k127_2105473_32 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003232 255.0
CMS3_k127_2105473_33 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002491 248.0
CMS3_k127_2105473_34 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000001315 250.0
CMS3_k127_2105473_35 HPr kinase - - - 0.0000000000000000000000000000000000000000000000000000000000004208 230.0
CMS3_k127_2105473_36 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000009535 196.0
CMS3_k127_2105473_37 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000411 177.0
CMS3_k127_2105473_38 ROS/MUCR transcriptional regulator protein - - - 0.00000000000000000000000000000000000000001505 158.0
CMS3_k127_2105473_39 Protein of unknown function DUF126 - - - 0.00000000000000000000000000008397 132.0
CMS3_k127_2105473_4 asparagine synthase K01953 - 6.3.5.4 1.217e-207 663.0
CMS3_k127_2105473_40 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000004533 108.0
CMS3_k127_2105473_41 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000003701 92.0
CMS3_k127_2105473_42 glycosyl transferase, family 39 - - - 0.0000000005025 73.0
CMS3_k127_2105473_44 VanZ like family - - - 0.000003636 59.0
CMS3_k127_2105473_45 Beta-lactamase superfamily domain - - - 0.000025 48.0
CMS3_k127_2105473_47 - - - - 0.0006003 48.0
CMS3_k127_2105473_5 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 5.773e-197 633.0
CMS3_k127_2105473_6 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 503.0
CMS3_k127_2105473_7 Protein of unknown function (DUF521) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 508.0
CMS3_k127_2105473_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 504.0
CMS3_k127_2105473_9 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 499.0
CMS3_k127_212755_0 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 478.0
CMS3_k127_212755_1 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 330.0
CMS3_k127_212755_2 Histone deacetylase domain - - - 0.000000000000000000005042 94.0
CMS3_k127_212755_3 nuclease - - - 0.00000000000000005448 80.0
CMS3_k127_2144078_0 LUD domain K18929 - - 1.797e-227 714.0
CMS3_k127_2144078_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 408.0
CMS3_k127_2144078_10 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.000000000000000000000000000000000000000000297 163.0
CMS3_k127_2144078_11 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000004424 154.0
CMS3_k127_2144078_12 protein conserved in bacteria - - - 0.000000000000000000000000000000000000007826 152.0
CMS3_k127_2144078_13 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000104 83.0
CMS3_k127_2144078_14 Domain of unknown function (DUF1902) - - - 0.00000000005155 66.0
CMS3_k127_2144078_2 membrane-bound lytic murein transglycosylase K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 409.0
CMS3_k127_2144078_3 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 380.0
CMS3_k127_2144078_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003416 273.0
CMS3_k127_2144078_5 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005062 258.0
CMS3_k127_2144078_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000537 234.0
CMS3_k127_2144078_7 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000891 211.0
CMS3_k127_2144078_8 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000008144 167.0
CMS3_k127_2144078_9 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000001107 168.0
CMS3_k127_2217534_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0 1532.0
CMS3_k127_2217534_1 ABC transporter substrate-binding protein K17321 - - 0.0 1026.0
CMS3_k127_2217534_10 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15785 - 2.6.1.76 1.099e-238 751.0
CMS3_k127_2217534_11 ABC-type dipeptide transport system periplasmic component K02035 - - 1.055e-228 737.0
CMS3_k127_2217534_12 Creatinase/Prolidase N-terminal domain K01271,K15783 - 3.4.13.9,3.5.4.44 1.289e-217 682.0
CMS3_k127_2217534_13 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 3.86e-203 641.0
CMS3_k127_2217534_14 Aldehyde dehydrogenase K15786 - - 1.031e-200 638.0
CMS3_k127_2217534_15 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 630.0
CMS3_k127_2217534_16 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 604.0
CMS3_k127_2217534_17 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 598.0
CMS3_k127_2217534_18 Protein conserved in bacteria K16514 - 5.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 582.0
CMS3_k127_2217534_19 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 577.0
CMS3_k127_2217534_2 Binding-protein-dependent transport system inner membrane component K02011 - - 9.635e-316 983.0
CMS3_k127_2217534_20 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 559.0
CMS3_k127_2217534_21 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 559.0
CMS3_k127_2217534_22 Belongs to the ABC transporter superfamily K17325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 526.0
CMS3_k127_2217534_23 COG1175 ABC-type sugar transport systems permease components K17322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 518.0
CMS3_k127_2217534_24 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 520.0
CMS3_k127_2217534_25 Amidohydrolase family K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 523.0
CMS3_k127_2217534_26 Bacterial extracellular solute-binding protein K02012,K11081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 518.0
CMS3_k127_2217534_27 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 527.0
CMS3_k127_2217534_28 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000938 525.0
CMS3_k127_2217534_29 Isocitrate/isopropylmalate dehydrogenase K00031,K00052,K07246 GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 498.0
CMS3_k127_2217534_3 Protein conserved in bacteria - - - 2.84e-304 944.0
CMS3_k127_2217534_30 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 494.0
CMS3_k127_2217534_31 succinylglutamate desuccinylase aspartoacylase K06987,K15784 - 3.5.1.125 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 505.0
CMS3_k127_2217534_32 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 481.0
CMS3_k127_2217534_33 Ectoine utilization K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 475.0
CMS3_k127_2217534_34 ABC-type sugar transport system, permease component K17323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 470.0
CMS3_k127_2217534_35 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 460.0
CMS3_k127_2217534_36 Belongs to the ABC transporter superfamily K17324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 460.0
CMS3_k127_2217534_37 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 452.0
CMS3_k127_2217534_38 ornithine cyclodeaminase K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 438.0
CMS3_k127_2217534_39 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 437.0
CMS3_k127_2217534_4 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 4.35e-301 936.0
CMS3_k127_2217534_40 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 431.0
CMS3_k127_2217534_41 Oligopeptide/dipeptide transporter, C-terminal region K02031,K15583,K15587 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 423.0
CMS3_k127_2217534_42 TOBE domain K02010,K02052 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 455.0
CMS3_k127_2217534_43 ABC-type polar amino acid transport system ATPase component K02028,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 413.0
CMS3_k127_2217534_44 TIGRFAM CitB domain protein K13795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 418.0
CMS3_k127_2217534_45 Aldo/keto reductase family K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 414.0
CMS3_k127_2217534_46 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 408.0
CMS3_k127_2217534_47 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 396.0
CMS3_k127_2217534_48 COG1082 Sugar phosphate isomerases epimerases K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 415.0
CMS3_k127_2217534_49 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 393.0
CMS3_k127_2217534_5 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 1.703e-285 886.0
CMS3_k127_2217534_50 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 370.0
CMS3_k127_2217534_51 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 368.0
CMS3_k127_2217534_52 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 379.0
CMS3_k127_2217534_53 Pfam:AmoA K07120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 367.0
CMS3_k127_2217534_54 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 369.0
CMS3_k127_2217534_55 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 355.0
CMS3_k127_2217534_56 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 347.0
CMS3_k127_2217534_57 ABC transporter permease K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 342.0
CMS3_k127_2217534_58 5-deoxyglucuronate isomerase K03337 - 5.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 359.0
CMS3_k127_2217534_59 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 373.0
CMS3_k127_2217534_6 Belongs to the TPP enzyme family K03336 - 3.7.1.22 1.315e-277 873.0
CMS3_k127_2217534_60 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 345.0
CMS3_k127_2217534_61 ABC transporter (Permease) K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 332.0
CMS3_k127_2217534_62 amino acid K01996,K11958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 334.0
CMS3_k127_2217534_63 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 339.0
CMS3_k127_2217534_64 Transcriptional regulatory protein, C terminal K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 309.0
CMS3_k127_2217534_65 Ectoine utilization protein EutA K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 304.0
CMS3_k127_2217534_66 Inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 302.0
CMS3_k127_2217534_67 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001068 281.0
CMS3_k127_2217534_68 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002475 274.0
CMS3_k127_2217534_69 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000441 282.0
CMS3_k127_2217534_7 Protein conserved in bacteria K07793 - - 4.878e-263 818.0
CMS3_k127_2217534_70 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001429 285.0
CMS3_k127_2217534_71 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000001245 287.0
CMS3_k127_2217534_72 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000155 269.0
CMS3_k127_2217534_73 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000455 254.0
CMS3_k127_2217534_74 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000005077 242.0
CMS3_k127_2217534_75 FCD - - - 0.000000000000000000000000000000000000000000000000000000000001443 218.0
CMS3_k127_2217534_76 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000000000000000000000000000000001511 197.0
CMS3_k127_2217534_77 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K19969 - 4.2.3.152,4.2.3.4 0.000000000000000000000000000000000000000000000000000002455 196.0
CMS3_k127_2217534_78 helix_turn_helix ASNC type K15782 - - 0.0000000000000000000000000000000000000000000000000008334 211.0
CMS3_k127_2217534_79 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000009379 196.0
CMS3_k127_2217534_8 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 4.219e-261 819.0
CMS3_k127_2217534_80 Transcriptional regulator GntR family - - - 0.00000000000000000000000000000000000000005975 165.0
CMS3_k127_2217534_81 small integral membrane protein - - - 0.0000000000000000000000000000000000003962 141.0
CMS3_k127_2217534_83 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000004805 58.0
CMS3_k127_2217534_84 Transmembrane family 220, helix - - - 0.00000006013 61.0
CMS3_k127_2217534_85 - - - - 0.00005384 48.0
CMS3_k127_2217534_9 PFAM ATP-grasp domain - - - 4.035e-245 760.0
CMS3_k127_2221192_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.95e-228 715.0
CMS3_k127_2221192_1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 6.616e-214 671.0
CMS3_k127_2221192_10 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 284.0
CMS3_k127_2221192_11 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004871 278.0
CMS3_k127_2221192_12 Putative serine dehydratase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003167 297.0
CMS3_k127_2221192_13 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001705 273.0
CMS3_k127_2221192_14 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001898 248.0
CMS3_k127_2221192_15 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000006875 241.0
CMS3_k127_2221192_16 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001151 228.0
CMS3_k127_2221192_17 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000008281 226.0
CMS3_k127_2221192_18 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000121 226.0
CMS3_k127_2221192_19 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002326 218.0
CMS3_k127_2221192_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 599.0
CMS3_k127_2221192_20 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000009388 213.0
CMS3_k127_2221192_21 structural constituent of ribosome K02879 - - 0.000000000000000000000000000000000000000000000000000000000004108 210.0
CMS3_k127_2221192_22 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000971 207.0
CMS3_k127_2221192_23 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000003434 183.0
CMS3_k127_2221192_24 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000001226 177.0
CMS3_k127_2221192_25 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000003451 162.0
CMS3_k127_2221192_26 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000000000001194 155.0
CMS3_k127_2221192_27 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000001263 153.0
CMS3_k127_2221192_28 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000006176 156.0
CMS3_k127_2221192_29 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000007416 131.0
CMS3_k127_2221192_3 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 544.0
CMS3_k127_2221192_30 Ribosomal protein L30p/L7e K02907 - - 0.0000000000000000000007317 98.0
CMS3_k127_2221192_31 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000004035 93.0
CMS3_k127_2221192_32 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000008615 64.0
CMS3_k127_2221192_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 453.0
CMS3_k127_2221192_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 398.0
CMS3_k127_2221192_6 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 347.0
CMS3_k127_2221192_7 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 351.0
CMS3_k127_2221192_8 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 331.0
CMS3_k127_2221192_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 294.0
CMS3_k127_2227653_0 serine protein kinase K07180 - - 0.0 1122.0
CMS3_k127_2227653_1 Trimethylamine methyltransferase (MTTB) - - - 1.791e-257 801.0
CMS3_k127_2227653_2 SpoVR family K06415 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 2.132e-253 793.0
CMS3_k127_2227653_3 Belongs to the GcvT family K00302 - 1.5.3.1 4.78e-199 627.0
CMS3_k127_2227653_4 Belongs to the UPF0229 family K09786 - - 3.916e-194 614.0
CMS3_k127_2227653_5 FAD dependent oxidoreductase central domain K00314 - 1.5.8.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 310.0
CMS3_k127_2227653_6 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000042 177.0
CMS3_k127_2227653_7 Sarcosine oxidase K00305 - 1.5.3.1 0.000000000000000000000000000000000005087 145.0
CMS3_k127_2227653_8 Serine threonine protein kinase K12132 - 2.7.11.1 0.0006629 48.0
CMS3_k127_2261712_0 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 393.0
CMS3_k127_2261712_1 COG1525 Micrococcal nuclease (thermonuclease) homologs - - - 0.0000000000000000000000008892 109.0
CMS3_k127_2261712_2 Protein of unknown function (DUF1674) - - - 0.00000001368 58.0
CMS3_k127_2265891_0 4Fe-4S binding domain - - - 2.168e-274 861.0
CMS3_k127_2265891_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 4.545e-222 701.0
CMS3_k127_2265891_10 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 431.0
CMS3_k127_2265891_11 Carbamoyltransferase C-terminus K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 438.0
CMS3_k127_2265891_12 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 409.0
CMS3_k127_2265891_13 COG2998 ABC-type tungstate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 375.0
CMS3_k127_2265891_14 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 358.0
CMS3_k127_2265891_15 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 345.0
CMS3_k127_2265891_16 Belongs to the UPF0758 family K03630 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 336.0
CMS3_k127_2265891_17 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 336.0
CMS3_k127_2265891_18 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 336.0
CMS3_k127_2265891_19 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 329.0
CMS3_k127_2265891_2 Proton-conducting membrane transporter K00341,K05568 - 1.6.5.3 2.139e-216 699.0
CMS3_k127_2265891_20 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 308.0
CMS3_k127_2265891_21 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 296.0
CMS3_k127_2265891_22 COG4662 ABC-type tungstate transport system, periplasmic component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 287.0
CMS3_k127_2265891_23 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 287.0
CMS3_k127_2265891_24 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002314 274.0
CMS3_k127_2265891_25 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008785 264.0
CMS3_k127_2265891_26 Uncharacterised protein family (UPF0262) - - - 0.000000000000000000000000000000000000000000000000000000000000000000009516 241.0
CMS3_k127_2265891_27 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03741 - 1.20.4.1,3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000002464 229.0
CMS3_k127_2265891_28 COG2111 Multisubunit Na H antiporter, MnhB subunit K05566 - - 0.00000000000000000000000000000000000000000000000000000000000004023 224.0
CMS3_k127_2265891_29 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000006705 211.0
CMS3_k127_2265891_3 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 1.743e-202 646.0
CMS3_k127_2265891_30 COG2111 Multisubunit Na H antiporter, MnhB subunit - - - 0.00000000000000000000000000000000000000000000000000002553 192.0
CMS3_k127_2265891_31 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.00000000000000000000000000000000000000000000000001112 184.0
CMS3_k127_2265891_32 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.0000000000000000000000000000000000000000000000007447 177.0
CMS3_k127_2265891_33 - - - - 0.0000000000000000000000000000000000000003801 155.0
CMS3_k127_2265891_35 Na+/H+ antiporter subunit K05571 - - 0.00000000000000000000000000005978 124.0
CMS3_k127_2265891_36 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000000000000001023 124.0
CMS3_k127_2265891_37 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000004097 112.0
CMS3_k127_2265891_38 - - - - 0.0000000000000002775 91.0
CMS3_k127_2265891_39 - - - - 0.000000000000003016 79.0
CMS3_k127_2265891_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.994e-197 623.0
CMS3_k127_2265891_40 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000001388 70.0
CMS3_k127_2265891_41 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000001524 82.0
CMS3_k127_2265891_42 - - - - 0.0000000000023 71.0
CMS3_k127_2265891_43 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000007764 73.0
CMS3_k127_2265891_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 612.0
CMS3_k127_2265891_6 Proton-conducting membrane transporter K00343,K05568 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 604.0
CMS3_k127_2265891_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 486.0
CMS3_k127_2265891_8 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 468.0
CMS3_k127_2265891_9 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 460.0
CMS3_k127_2265954_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.779e-248 794.0
CMS3_k127_2265954_1 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 524.0
CMS3_k127_2265954_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 451.0
CMS3_k127_2265954_3 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 411.0
CMS3_k127_2265954_4 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 359.0
CMS3_k127_2265954_5 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 346.0
CMS3_k127_2265954_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000005916 270.0
CMS3_k127_2265954_7 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000003028 193.0
CMS3_k127_2265954_8 Metal binding domain of Ada K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000002023 182.0
CMS3_k127_2282060_0 FAD dependent oxidoreductase central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 356.0
CMS3_k127_2282060_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 365.0
CMS3_k127_2350624_0 COG1042 Acyl-CoA synthetase (NDP forming) K09181 - - 1.5e-323 1013.0
CMS3_k127_2350624_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 556.0
CMS3_k127_2350624_2 COG0025 NhaP-type Na H and K H antiporters K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 449.0
CMS3_k127_2350624_3 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 441.0
CMS3_k127_2350624_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006235 265.0
CMS3_k127_2350624_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000001414 213.0
CMS3_k127_2350624_6 COG4235 Cytochrome c biogenesis factor K02200 - - 0.0000000000000000000000000000000000000000000000000006923 203.0
CMS3_k127_2350624_7 Ribosomal subunit interface protein - - - 0.0000000000000000000000001364 109.0
CMS3_k127_2350624_8 FecR protein - - - 0.00000001629 68.0
CMS3_k127_2373332_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain - - - 7.119e-233 746.0
CMS3_k127_2373332_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 2.453e-228 713.0
CMS3_k127_2373332_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
CMS3_k127_2373332_11 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009253 269.0
CMS3_k127_2373332_12 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000017 172.0
CMS3_k127_2373332_13 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0001465 50.0
CMS3_k127_2373332_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 2.509e-207 659.0
CMS3_k127_2373332_3 CoA binding domain - - - 1.038e-197 636.0
CMS3_k127_2373332_4 TatD related DNase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 521.0
CMS3_k127_2373332_5 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 508.0
CMS3_k127_2373332_6 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 438.0
CMS3_k127_2373332_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K19969 - 4.2.3.152,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 376.0
CMS3_k127_2373332_8 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 349.0
CMS3_k127_2373332_9 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008581 299.0
CMS3_k127_2465427_0 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 590.0
CMS3_k127_2465427_1 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 544.0
CMS3_k127_2465427_10 Pentapeptide repeats (9 copies) - - - 0.00000000000001188 81.0
CMS3_k127_2465427_11 Protein of unknown function (DUF2892) - - - 0.00007403 48.0
CMS3_k127_2465427_2 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 509.0
CMS3_k127_2465427_3 Dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 501.0
CMS3_k127_2465427_4 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 417.0
CMS3_k127_2465427_5 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 413.0
CMS3_k127_2465427_6 Alpha beta hydrolase K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 387.0
CMS3_k127_2465427_7 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 374.0
CMS3_k127_2465427_8 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 350.0
CMS3_k127_2465427_9 Spondin_N - - - 0.000000000000000000004801 102.0
CMS3_k127_2495736_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1357.0
CMS3_k127_2495736_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 397.0
CMS3_k127_2495736_10 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000000000000003262 207.0
CMS3_k127_2495736_11 Domain of unknown function (DUF4864) - - - 0.0000000000000000000000000000003832 128.0
CMS3_k127_2495736_12 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000009535 113.0
CMS3_k127_2495736_13 COG5126 Ca2 -binding protein (EF-Hand superfamily - - - 0.0000000000000000000007315 105.0
CMS3_k127_2495736_14 - - - - 0.000000000000000000007827 99.0
CMS3_k127_2495736_15 - - - - 0.0000000000000000004006 91.0
CMS3_k127_2495736_16 bacterial-type flagellum-dependent cell motility K02388 - - 0.0000000004082 66.0
CMS3_k127_2495736_2 fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 367.0
CMS3_k127_2495736_3 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 355.0
CMS3_k127_2495736_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 337.0
CMS3_k127_2495736_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 317.0
CMS3_k127_2495736_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 314.0
CMS3_k127_2495736_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000007434 265.0
CMS3_k127_2495736_8 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000002985 237.0
CMS3_k127_2495736_9 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007893 247.0
CMS3_k127_2501741_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 6.699e-198 634.0
CMS3_k127_2501741_1 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 561.0
CMS3_k127_2501741_10 COG0784 FOG CheY-like receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000001623 216.0
CMS3_k127_2501741_11 COG3143 Chemotaxis protein K03414 - - 0.00000000000000000000000000000000000000000000000000000005506 202.0
CMS3_k127_2501741_12 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000004695 200.0
CMS3_k127_2501741_13 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000000000000000000000000001905 193.0
CMS3_k127_2501741_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000006523 185.0
CMS3_k127_2501741_15 PFAM MgtE intracellular - - - 0.0000000000000000000000000000000000000000000001175 176.0
CMS3_k127_2501741_16 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000704 164.0
CMS3_k127_2501741_17 Chemotaxis MotB protein K02557 - - 0.00000000000000000000000000000002307 141.0
CMS3_k127_2501741_18 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02397 - - 0.0000000000000000000000001412 122.0
CMS3_k127_2501741_19 Rod binding protein - - - 0.0000000000000000000003744 102.0
CMS3_k127_2501741_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 517.0
CMS3_k127_2501741_20 chlorophyll binding - - - 0.0000000000000000000008496 104.0
CMS3_k127_2501741_22 flagellar assembly - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000001869 85.0
CMS3_k127_2501741_23 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.000000000009475 72.0
CMS3_k127_2501741_24 - - - - 0.00000003956 66.0
CMS3_k127_2501741_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 524.0
CMS3_k127_2501741_4 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 359.0
CMS3_k127_2501741_5 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 369.0
CMS3_k127_2501741_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008102 336.0
CMS3_k127_2501741_7 flagellar hook-associated protein K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 305.0
CMS3_k127_2501741_8 Flagellar basal body P-ring biosynthesis protein K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000003152 238.0
CMS3_k127_2501741_9 Belongs to the flagella basal body rod proteins family K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000002044 232.0
CMS3_k127_2593946_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 6.877e-294 921.0
CMS3_k127_2593946_1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000002498 228.0
CMS3_k127_2671821_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1024.0
CMS3_k127_2671821_1 COG2030 Acyl dehydratase K14449 - 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 503.0
CMS3_k127_2671821_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 466.0
CMS3_k127_2671821_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000687 409.0
CMS3_k127_2671821_4 Phosphomethylpyrimidine kinase K00868 - 2.7.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 336.0
CMS3_k127_2671821_5 Domain of unknown function (DUF1993) - - - 0.0000000000000000000000000000000000000000000000000000000000000046 222.0
CMS3_k127_2671821_6 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000000000000000000000217 175.0
CMS3_k127_2671821_7 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000006538 172.0
CMS3_k127_2671821_8 succinate dehydrogenase K00242 - - 0.000000000000000000000000000000000004029 141.0
CMS3_k127_2671821_9 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000002127 70.0
CMS3_k127_2714784_0 HELICc2 K03722 - 3.6.4.12 0.0 1144.0
CMS3_k127_2714784_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000003518 199.0
CMS3_k127_2714784_2 'TIGRFAM RNA polymerase sigma factor, sigma-70 family' K03088 - - 0.000000000000000000000000000000000000000000000001248 182.0
CMS3_k127_2714784_3 N-Acetylmuramoyl-L-alanine amidase K01447,K03806,K11066 - 3.5.1.28 0.000000000000000000000000000000000000000000001916 168.0
CMS3_k127_2714784_4 tigrfam pas - - - 0.0000000000000000000000000000001722 143.0
CMS3_k127_2714784_5 HELICc2 K03722 - 3.6.4.12 0.0000000000001549 73.0
CMS3_k127_276248_0 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 377.0
CMS3_k127_276248_1 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 325.0
CMS3_k127_276248_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 310.0
CMS3_k127_276248_3 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000007943 255.0
CMS3_k127_276248_4 cyclic nucleotide-binding - - - 0.0000000009559 70.0
CMS3_k127_2804580_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1632.0
CMS3_k127_2804580_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.735e-293 915.0
CMS3_k127_2804580_10 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 580.0
CMS3_k127_2804580_11 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 570.0
CMS3_k127_2804580_12 PFAM isocitrate isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 531.0
CMS3_k127_2804580_13 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 501.0
CMS3_k127_2804580_14 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 507.0
CMS3_k127_2804580_15 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 482.0
CMS3_k127_2804580_16 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 407.0
CMS3_k127_2804580_17 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 398.0
CMS3_k127_2804580_18 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
CMS3_k127_2804580_19 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 353.0
CMS3_k127_2804580_2 GMC oxidoreductase - - - 4.811e-275 852.0
CMS3_k127_2804580_20 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 350.0
CMS3_k127_2804580_21 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002766 283.0
CMS3_k127_2804580_22 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002552 273.0
CMS3_k127_2804580_23 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001249 249.0
CMS3_k127_2804580_24 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000001273 234.0
CMS3_k127_2804580_25 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000000002199 215.0
CMS3_k127_2804580_26 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000006718 204.0
CMS3_k127_2804580_27 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000006871 181.0
CMS3_k127_2804580_28 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000004788 156.0
CMS3_k127_2804580_29 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.000000000000000000000000000000003058 149.0
CMS3_k127_2804580_3 COG0480 Translation elongation factors (GTPases) K02355 - - 5.485e-264 829.0
CMS3_k127_2804580_31 Related to arylsulfate sulfotransferase involved in siderophore - - - 0.000000000000000000000000000000304 126.0
CMS3_k127_2804580_32 - - - - 0.0000000000000002185 93.0
CMS3_k127_2804580_4 Tripartite tricarboxylate transporter TctA family K07793 - - 1.103e-215 686.0
CMS3_k127_2804580_5 Aminotransferase K00812 - 2.6.1.1 1.547e-213 667.0
CMS3_k127_2804580_6 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.155e-205 654.0
CMS3_k127_2804580_7 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 3.171e-197 633.0
CMS3_k127_2804580_8 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 612.0
CMS3_k127_2804580_9 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 607.0
CMS3_k127_2848721_0 Methionine synthase K00548 - 2.1.1.13 0.0 1724.0
CMS3_k127_2848721_1 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1669.0
CMS3_k127_2848721_2 Oligopeptidase F K08602 - - 5.743e-282 876.0
CMS3_k127_2848721_3 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 5.164e-228 721.0
CMS3_k127_2848721_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 482.0
CMS3_k127_2848721_5 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 389.0
CMS3_k127_2848721_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
CMS3_k127_2848721_7 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 306.0
CMS3_k127_2848721_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001424 283.0
CMS3_k127_2848721_9 low-complexity proteins - - - 0.0000000000000000000000006607 117.0
CMS3_k127_2879310_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 506.0
CMS3_k127_2879310_1 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 296.0
CMS3_k127_2913688_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 4.237e-305 947.0
CMS3_k127_2913688_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 598.0
CMS3_k127_2913688_10 COG1335 Amidases related to nicotinamidase - - - 0.000000000000000000000000000000000000000000001041 171.0
CMS3_k127_2913688_11 - - - - 0.0000000000000000000000000000000000002362 151.0
CMS3_k127_2913688_12 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000004636 131.0
CMS3_k127_2913688_13 - - - - 0.0000000000000000000000000001611 121.0
CMS3_k127_2913688_14 - - - - 0.000000000001748 75.0
CMS3_k127_2913688_2 Belongs to the DEAD box helicase family K03732,K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 569.0
CMS3_k127_2913688_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 516.0
CMS3_k127_2913688_4 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 479.0
CMS3_k127_2913688_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 351.0
CMS3_k127_2913688_6 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 295.0
CMS3_k127_2913688_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003994 269.0
CMS3_k127_2913688_8 Destroys radicals which are normally produced within the cells and which are toxic to biological systems - - - 0.00000000000000000000000000000000000000000000000009015 185.0
CMS3_k127_2913688_9 COG1607 Acyl-CoA hydrolase K10806 - - 0.00000000000000000000000000000000000000000000005436 172.0
CMS3_k127_2941524_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 429.0
CMS3_k127_2941524_1 cytochrome c oxidase K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 398.0
CMS3_k127_2941524_2 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.00000000000000000000000000000000000000000000000000000000000000000003483 237.0
CMS3_k127_2941524_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000008057 198.0
CMS3_k127_29586_0 Asparagine synthase K01953 - 6.3.5.4 3.136e-278 870.0
CMS3_k127_29586_1 56kDa selenium binding protein (SBP56) K17285 - - 4.927e-212 666.0
CMS3_k127_29586_10 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 448.0
CMS3_k127_29586_11 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 437.0
CMS3_k127_29586_12 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 437.0
CMS3_k127_29586_13 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 432.0
CMS3_k127_29586_14 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 425.0
CMS3_k127_29586_15 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 428.0
CMS3_k127_29586_16 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008207 421.0
CMS3_k127_29586_17 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 396.0
CMS3_k127_29586_18 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 385.0
CMS3_k127_29586_19 Transcriptional regulatory protein, C terminal K14981 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 355.0
CMS3_k127_29586_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 601.0
CMS3_k127_29586_20 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 329.0
CMS3_k127_29586_21 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581 297.0
CMS3_k127_29586_22 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001506 295.0
CMS3_k127_29586_23 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009545 282.0
CMS3_k127_29586_24 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002093 286.0
CMS3_k127_29586_25 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000004653 228.0
CMS3_k127_29586_26 Alginate export K16081 - - 0.000000000000000000000000000000000000000000000000000000002244 218.0
CMS3_k127_29586_27 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000003386 206.0
CMS3_k127_29586_28 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000001693 206.0
CMS3_k127_29586_29 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000002808 205.0
CMS3_k127_29586_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 563.0
CMS3_k127_29586_30 alpha-ribazole phosphatase activity K01834,K15634,K22306 - 3.1.3.85,5.4.2.11,5.4.2.12 0.00000000000000000000000000000000000000282 153.0
CMS3_k127_29586_31 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000008903 158.0
CMS3_k127_29586_32 O-antigen ligase like membrane protein - - - 0.00000000000000000000000000000000006154 155.0
CMS3_k127_29586_34 With GlrK is part of a two-component signal transduction system regulating glmY K07715 - - 0.0000000000003093 83.0
CMS3_k127_29586_35 - - - - 0.00000000627 65.0
CMS3_k127_29586_4 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 503.0
CMS3_k127_29586_5 Histidine kinase-like ATPases K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 500.0
CMS3_k127_29586_6 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 495.0
CMS3_k127_29586_7 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 487.0
CMS3_k127_29586_8 NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 474.0
CMS3_k127_29586_9 Putrescine transport system permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 452.0
CMS3_k127_2959983_0 peptidyl-prolyl cis-trans isomerase activity K03769,K07533 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001747 201.0
CMS3_k127_2959983_1 Cytochrome D1 heme domain - - - 0.000000000000000000000000000000000000000003219 173.0
CMS3_k127_2959983_2 COG3474 Cytochrome c2 K08738 - - 0.00000000000000000000009495 113.0
CMS3_k127_2959983_3 Multicopper oxidase K22349 - 1.16.3.3 0.00000000000000006654 81.0
CMS3_k127_2976066_0 Precorrin-3B K05934,K13541 - 2.1.1.131,3.7.1.12 1.392e-225 719.0
CMS3_k127_2976066_1 COG2059 Chromate transport protein ChrA K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 561.0
CMS3_k127_2976066_10 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 407.0
CMS3_k127_2976066_11 Spermidine synthase tetramerisation domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 394.0
CMS3_k127_2976066_12 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 384.0
CMS3_k127_2976066_13 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 397.0
CMS3_k127_2976066_14 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 340.0
CMS3_k127_2976066_15 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 331.0
CMS3_k127_2976066_16 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 323.0
CMS3_k127_2976066_17 Precorrin-2 K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 333.0
CMS3_k127_2976066_18 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 318.0
CMS3_k127_2976066_19 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 314.0
CMS3_k127_2976066_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 542.0
CMS3_k127_2976066_20 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 296.0
CMS3_k127_2976066_21 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001539 286.0
CMS3_k127_2976066_22 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000002221 269.0
CMS3_k127_2976066_23 reductase K05895 - 1.3.1.106,1.3.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000004632 267.0
CMS3_k127_2976066_24 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000912 249.0
CMS3_k127_2976066_25 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001405 251.0
CMS3_k127_2976066_26 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002632 249.0
CMS3_k127_2976066_27 PFAM Precorrin-8X methylmutase CbiC CobH K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000226 243.0
CMS3_k127_2976066_28 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000007939 242.0
CMS3_k127_2976066_29 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000009532 233.0
CMS3_k127_2976066_3 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 529.0
CMS3_k127_2976066_30 intradiol ring-cleavage dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000008773 220.0
CMS3_k127_2976066_31 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.000000000000000000000000000000000000000000000000000000000001685 213.0
CMS3_k127_2976066_32 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000001103 227.0
CMS3_k127_2976066_33 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000003602 205.0
CMS3_k127_2976066_34 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000000001082 198.0
CMS3_k127_2976066_35 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000004467 193.0
CMS3_k127_2976066_36 DNA repair protein MmcB-like - - - 0.00000000000000000000000000000000000000000001561 168.0
CMS3_k127_2976066_37 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000000000000000000000000001341 159.0
CMS3_k127_2976066_38 Belongs to the BI1 family K06890 - - 0.000000000000000000000000000000000001594 139.0
CMS3_k127_2976066_39 PAS domain - - - 0.00000000000000000000000000000002548 132.0
CMS3_k127_2976066_4 CbiX K03795 - 4.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 530.0
CMS3_k127_2976066_40 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000002855 108.0
CMS3_k127_2976066_42 PAN domain - - - 0.0000000000001843 83.0
CMS3_k127_2976066_43 PFAM Transposase IS200 like K07491 - - 0.0000002369 57.0
CMS3_k127_2976066_5 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 514.0
CMS3_k127_2976066_6 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 505.0
CMS3_k127_2976066_7 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 485.0
CMS3_k127_2976066_8 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 484.0
CMS3_k127_2976066_9 Precorrin-6Y C5,15-methyltransferase K00595 - 2.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 491.0
CMS3_k127_2985544_0 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 413.0
CMS3_k127_2985544_1 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 360.0
CMS3_k127_2985544_2 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067,K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002616 261.0
CMS3_k127_2985544_3 transport system auxiliary component K18480 - - 0.00000000000000000000000000000000000000000000000000000000000000000003915 239.0
CMS3_k127_2985544_4 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000002003 202.0
CMS3_k127_2985544_5 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000006037 136.0
CMS3_k127_2985544_6 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000000000000000000269 113.0
CMS3_k127_2985544_7 Cupin domain - - - 0.00000000000000000000001272 108.0
CMS3_k127_2995100_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1081.0
CMS3_k127_2995100_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 4.39e-242 754.0
CMS3_k127_2995100_10 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000002376 226.0
CMS3_k127_2995100_11 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000002835 216.0
CMS3_k127_2995100_12 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000005923 188.0
CMS3_k127_2995100_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000004277 154.0
CMS3_k127_2995100_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000004749 142.0
CMS3_k127_2995100_15 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000005819 138.0
CMS3_k127_2995100_16 Domain of unknown function (DUF1476) - - - 0.000000000000000000000000000000001244 134.0
CMS3_k127_2995100_17 PIN domain - - - 0.0000000000000000000000000004696 119.0
CMS3_k127_2995100_18 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000008504 114.0
CMS3_k127_2995100_19 SnoaL-like domain - - - 0.000000000000000000002008 102.0
CMS3_k127_2995100_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 9.294e-213 672.0
CMS3_k127_2995100_20 Domain of unknown function (DUF1127) - - - 0.000000002439 61.0
CMS3_k127_2995100_21 Plasmid stability protein K21495 - - 0.000006552 54.0
CMS3_k127_2995100_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 3.407e-194 614.0
CMS3_k127_2995100_4 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 433.0
CMS3_k127_2995100_5 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 419.0
CMS3_k127_2995100_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 343.0
CMS3_k127_2995100_7 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 295.0
CMS3_k127_2995100_8 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006047 271.0
CMS3_k127_2995100_9 Protein of unknown function (DUF1097) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004299 236.0
CMS3_k127_3011492_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1248.0
CMS3_k127_3011492_1 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1050.0
CMS3_k127_3011492_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 320.0
CMS3_k127_3011492_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 312.0
CMS3_k127_3011492_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 312.0
CMS3_k127_3011492_13 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002425 304.0
CMS3_k127_3011492_14 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004003 289.0
CMS3_k127_3011492_15 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009077 274.0
CMS3_k127_3011492_16 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000088 263.0
CMS3_k127_3011492_17 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000005605 236.0
CMS3_k127_3011492_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000000007126 180.0
CMS3_k127_3011492_19 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000000000000001292 149.0
CMS3_k127_3011492_2 NADH ubiquinone oxidoreductase subunit 5 (chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 1.498e-305 947.0
CMS3_k127_3011492_20 Protein of unknown function (DUF1467) - - - 0.000000000000000000000003027 103.0
CMS3_k127_3011492_22 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000001192 57.0
CMS3_k127_3011492_23 - - - - 0.00004682 47.0
CMS3_k127_3011492_24 actin binding - GO:0001669,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008092,GO:0012505,GO:0030141,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0097223,GO:0097708,GO:0099503 - 0.0007322 46.0
CMS3_k127_3011492_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 6.705e-244 759.0
CMS3_k127_3011492_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.978e-243 754.0
CMS3_k127_3011492_5 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 4.115e-242 757.0
CMS3_k127_3011492_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 9.102e-226 719.0
CMS3_k127_3011492_7 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 4.985e-225 722.0
CMS3_k127_3011492_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 6.979e-198 628.0
CMS3_k127_3011492_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009067 565.0
CMS3_k127_3024622_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1275.0
CMS3_k127_3024622_1 GTP-binding protein TypA K06207 - - 8.76e-292 908.0
CMS3_k127_3024622_10 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 357.0
CMS3_k127_3024622_11 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 368.0
CMS3_k127_3024622_12 Gram-negative porin K08720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 350.0
CMS3_k127_3024622_13 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 338.0
CMS3_k127_3024622_14 Gram-negative porin K08720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 341.0
CMS3_k127_3024622_15 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 326.0
CMS3_k127_3024622_16 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 326.0
CMS3_k127_3024622_17 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 321.0
CMS3_k127_3024622_18 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 315.0
CMS3_k127_3024622_19 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 298.0
CMS3_k127_3024622_2 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 5.835e-284 887.0
CMS3_k127_3024622_20 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003904 267.0
CMS3_k127_3024622_21 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002288 272.0
CMS3_k127_3024622_22 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000177 259.0
CMS3_k127_3024622_23 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000004403 226.0
CMS3_k127_3024622_24 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004741 230.0
CMS3_k127_3024622_25 auxin-activated signaling pathway K07088 - - 0.0000000000000000000000000000000000000000000000000000000000002411 222.0
CMS3_k127_3024622_26 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000001619 214.0
CMS3_k127_3024622_27 Integral membrane protein (DUF2244) - - - 0.0000000000000000000000000000000000000000000000000000000003021 208.0
CMS3_k127_3024622_28 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000003973 205.0
CMS3_k127_3024622_29 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000000437 202.0
CMS3_k127_3024622_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.409e-282 878.0
CMS3_k127_3024622_30 Ferredoxin, 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000001598 196.0
CMS3_k127_3024622_31 Domain of unknown function (DUF3576) - - - 0.0000000000000000000000000000000000000000000000004707 184.0
CMS3_k127_3024622_32 Lipopolysaccharide-assembly K03643 - - 0.000000000000000000000000000000000000000000008428 171.0
CMS3_k127_3024622_33 PIN domain - - - 0.000000000000000000000000000000000000000003728 158.0
CMS3_k127_3024622_34 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000008363 159.0
CMS3_k127_3024622_35 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000624 169.0
CMS3_k127_3024622_36 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000001068 132.0
CMS3_k127_3024622_37 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000001795 123.0
CMS3_k127_3024622_38 domain, Protein - - - 0.0000000000000000000000000001051 118.0
CMS3_k127_3024622_39 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000006086 103.0
CMS3_k127_3024622_4 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 591.0
CMS3_k127_3024622_40 Polymer-forming cytoskeletal - - - 0.0000000000000000000001704 112.0
CMS3_k127_3024622_5 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 489.0
CMS3_k127_3024622_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 487.0
CMS3_k127_3024622_7 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 482.0
CMS3_k127_3024622_8 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 469.0
CMS3_k127_3024622_9 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 374.0
CMS3_k127_3032499_0 This protein is involved in the repair of mismatches in DNA K03555 - - 0.0 1189.0
CMS3_k127_3032499_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1161.0
CMS3_k127_3032499_2 malic enzyme K00029 - 1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 344.0
CMS3_k127_3032499_3 - - - - 0.0000000000000000000000000000000000000000000000001433 184.0
CMS3_k127_3043849_0 LVIVD repeat - - - 0.0 1771.0
CMS3_k127_3043849_1 Orn/Lys/Arg decarboxylase, C-terminal domain K01584 - 4.1.1.19 0.0 1289.0
CMS3_k127_3043849_10 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 591.0
CMS3_k127_3043849_11 transport system, fused permease components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 564.0
CMS3_k127_3043849_12 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 537.0
CMS3_k127_3043849_13 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 475.0
CMS3_k127_3043849_14 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 428.0
CMS3_k127_3043849_15 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 408.0
CMS3_k127_3043849_16 choloylglycine hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 402.0
CMS3_k127_3043849_17 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 403.0
CMS3_k127_3043849_18 PFAM Prokaryotic protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 390.0
CMS3_k127_3043849_19 Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 392.0
CMS3_k127_3043849_2 4Fe-4S dicluster domain - - - 2.556e-287 904.0
CMS3_k127_3043849_20 transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 385.0
CMS3_k127_3043849_21 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 360.0
CMS3_k127_3043849_22 Cytochrome c3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 344.0
CMS3_k127_3043849_23 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 330.0
CMS3_k127_3043849_24 PFAM ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001212 253.0
CMS3_k127_3043849_25 COG1414 Transcriptional regulator K02624 - - 0.0000000000000000000000000000000000000000000000000000000000000000009583 237.0
CMS3_k127_3043849_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000009803 252.0
CMS3_k127_3043849_27 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000005235 227.0
CMS3_k127_3043849_28 Short-chain dehydrogenase reductase sdr K00034,K00059 - 1.1.1.100,1.1.1.47 0.0000000000000000000000000000000000000000000000000004171 193.0
CMS3_k127_3043849_29 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000001325 171.0
CMS3_k127_3043849_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01953 - 6.3.5.4 1.352e-271 847.0
CMS3_k127_3043849_30 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA - - - 0.000000000000000000000000002907 119.0
CMS3_k127_3043849_31 - - - - 0.00000000000000001283 87.0
CMS3_k127_3043849_32 Resolvase, N terminal domain - - - 0.00000000001255 69.0
CMS3_k127_3043849_33 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000001665 62.0
CMS3_k127_3043849_34 Major Facilitator Superfamily - - - 0.0008459 49.0
CMS3_k127_3043849_35 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.0009065 44.0
CMS3_k127_3043849_4 Cyanophycin synthetase - - - 4.738e-261 818.0
CMS3_k127_3043849_5 Biotin carboxylase - - - 1.105e-240 759.0
CMS3_k127_3043849_6 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.049e-237 748.0
CMS3_k127_3043849_7 Conserved carboxylase domain - - - 2.115e-237 742.0
CMS3_k127_3043849_8 - - - - 4.129e-201 646.0
CMS3_k127_3043849_9 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 623.0
CMS3_k127_3079646_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 502.0
CMS3_k127_3079646_1 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 450.0
CMS3_k127_3079646_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 413.0
CMS3_k127_3079646_3 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000009202 217.0
CMS3_k127_3079646_4 PFAM extracellular solute-binding protein family 1 K02027 - - 0.000000000000000000000000000000000000000000000000006186 185.0
CMS3_k127_3079646_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000003264 96.0
CMS3_k127_3080573_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1324.0
CMS3_k127_3080573_1 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 9.498e-237 734.0
CMS3_k127_3080573_2 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 430.0
CMS3_k127_3080573_3 Mechanosensitive ion channel K03442 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022607,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055082,GO:0055085,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 311.0
CMS3_k127_3080573_4 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 296.0
CMS3_k127_3080573_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K09565 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000006078 250.0
CMS3_k127_3080573_6 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000006202 208.0
CMS3_k127_3080573_7 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.000000000000002219 75.0
CMS3_k127_3080573_8 Domain of unknown function (DUF1127) - - - 0.000488 48.0
CMS3_k127_3154008_0 CHASE2 K01768 - 4.6.1.1 2.23e-246 785.0
CMS3_k127_3154008_1 PFAM SapC family protein - - - 0.0000000000000000000000000000000000000000003624 164.0
CMS3_k127_3154008_2 Globin - - - 0.000000000000000000000000006687 116.0
CMS3_k127_315982_0 Belongs to the peptidase S16 family - - - 2.265e-274 866.0
CMS3_k127_315982_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.182e-261 819.0
CMS3_k127_315982_10 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 368.0
CMS3_k127_315982_11 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 351.0
CMS3_k127_315982_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 355.0
CMS3_k127_315982_13 Transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 310.0
CMS3_k127_315982_14 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 307.0
CMS3_k127_315982_15 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003174 289.0
CMS3_k127_315982_16 Protein of unknown function (DUF1638) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008332 276.0
CMS3_k127_315982_17 COG1145 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003544 269.0
CMS3_k127_315982_18 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004123 275.0
CMS3_k127_315982_19 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004393 250.0
CMS3_k127_315982_2 Branched-chain amino acid transport system / permease component K01997,K01998 - - 1.312e-258 810.0
CMS3_k127_315982_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000633 245.0
CMS3_k127_315982_21 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000005966 220.0
CMS3_k127_315982_22 glutamine amidotransferase K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000001386 211.0
CMS3_k127_315982_24 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000001615 146.0
CMS3_k127_315982_25 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.0000000000000000000000000000000000004828 143.0
CMS3_k127_315982_26 Virulence factor - - - 0.0000000000000000000000000000002819 123.0
CMS3_k127_315982_27 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.00000000000000000000000000002593 125.0
CMS3_k127_315982_28 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000002855 108.0
CMS3_k127_315982_29 response to stress - - - 0.0000000000000004345 93.0
CMS3_k127_315982_3 histidine ammonia-lyase activity K01745 - 4.3.1.3 1.751e-196 626.0
CMS3_k127_315982_30 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.0000000003221 74.0
CMS3_k127_315982_4 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 583.0
CMS3_k127_315982_5 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 553.0
CMS3_k127_315982_6 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 526.0
CMS3_k127_315982_7 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 445.0
CMS3_k127_315982_8 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 432.0
CMS3_k127_315982_9 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 405.0
CMS3_k127_3246570_0 Flagellar hook protein flgE K02390 - - 0.000000000000000000000000000000000000000000000000000000001773 223.0
CMS3_k127_3246570_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000000000001015 206.0
CMS3_k127_3246570_2 Flagellar protein FliS K02422 - - 0.0000000000000000000000000001493 121.0
CMS3_k127_3246570_3 Flagellar hook-length control protein FliK - - - 0.000000000000000000000005724 118.0
CMS3_k127_3246570_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000004526 63.0
CMS3_k127_3246570_5 flagellar protein FliS K02422 - - 0.0000001407 60.0
CMS3_k127_3270527_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0 1263.0
CMS3_k127_3270527_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 509.0
CMS3_k127_3270527_10 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000000000000000000000000000000000000000000003144 229.0
CMS3_k127_3270527_11 Secreted protein - - - 0.00000000000000000000000000000000000000000000000000000000000002097 224.0
CMS3_k127_3270527_12 Belongs to the phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000002608 174.0
CMS3_k127_3270527_13 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins - - - 0.0000000000000000000002407 111.0
CMS3_k127_3270527_14 Protein conserved in bacteria - - - 0.00000000000001554 81.0
CMS3_k127_3270527_15 Cyclophilin-like K09143 - - 0.0000000000003862 74.0
CMS3_k127_3270527_2 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 425.0
CMS3_k127_3270527_3 coenzyme F390 K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 414.0
CMS3_k127_3270527_4 Isochorismatase family K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 317.0
CMS3_k127_3270527_5 phenylacetate-CoA ligase activity K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 319.0
CMS3_k127_3270527_6 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004066 284.0
CMS3_k127_3270527_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001701 282.0
CMS3_k127_3270527_8 Putative 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001007 269.0
CMS3_k127_3270527_9 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003021 268.0
CMS3_k127_3304099_0 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 420.0
CMS3_k127_3304099_1 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003149 270.0
CMS3_k127_3314045_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1413.0
CMS3_k127_3314045_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.57e-322 995.0
CMS3_k127_3314045_10 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 379.0
CMS3_k127_3314045_11 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 375.0
CMS3_k127_3314045_12 Belongs to the FPP GGPP synthase family K00795 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 373.0
CMS3_k127_3314045_13 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 360.0
CMS3_k127_3314045_14 PFAM conserved K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 327.0
CMS3_k127_3314045_15 Globin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 324.0
CMS3_k127_3314045_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 306.0
CMS3_k127_3314045_17 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000002264 261.0
CMS3_k127_3314045_18 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001956 256.0
CMS3_k127_3314045_19 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000005436 209.0
CMS3_k127_3314045_2 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 596.0
CMS3_k127_3314045_20 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000003388 208.0
CMS3_k127_3314045_21 ABC transporter K06021 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000009677 204.0
CMS3_k127_3314045_22 - - - - 0.000000000000000000000000000000000002105 147.0
CMS3_k127_3314045_23 transcriptional regulators K22042 - - 0.0000000000000000000000000000000001001 139.0
CMS3_k127_3314045_24 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000000001099 118.0
CMS3_k127_3314045_25 Protein of unknown function (DUF423) - - - 0.000000000000000000000000001415 121.0
CMS3_k127_3314045_26 Methyl-accepting chemotaxis protein (MCP) signalling domain - - - 0.000000000000000000000002944 117.0
CMS3_k127_3314045_27 nuclease K16561 - - 0.00000000000000000000002097 109.0
CMS3_k127_3314045_28 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000002274 97.0
CMS3_k127_3314045_29 Nucleotidyltransferase domain - - - 0.00000000000000000008882 92.0
CMS3_k127_3314045_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 555.0
CMS3_k127_3314045_30 PFAM HEPN domain - - - 0.000000000004007 69.0
CMS3_k127_3314045_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 505.0
CMS3_k127_3314045_5 COG0616 Periplasmic serine proteases (ClpP class) K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 497.0
CMS3_k127_3314045_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 439.0
CMS3_k127_3314045_7 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 437.0
CMS3_k127_3314045_8 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 426.0
CMS3_k127_3314045_9 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 419.0
CMS3_k127_3332399_0 Trypsin - - - 0.00000000000000000000000000000008456 141.0
CMS3_k127_3332399_1 Trypsin - - - 0.00000000000000000004743 102.0
CMS3_k127_3332399_2 Forkhead associated domain - - - 0.000000000000000001533 98.0
CMS3_k127_3401026_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 287.0
CMS3_k127_3401026_1 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000009483 138.0
CMS3_k127_3401026_2 surface antigen - - - 0.00000000000000000000000000000003141 133.0
CMS3_k127_3401026_3 Response regulator receiver - - - 0.00000918 54.0
CMS3_k127_34418_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 6.037e-270 848.0
CMS3_k127_34418_1 repeat protein - - - 1.04e-265 829.0
CMS3_k127_34418_10 COG1592 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006474 266.0
CMS3_k127_34418_11 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001043 266.0
CMS3_k127_34418_12 Belongs to the Fur family K09826 - - 0.000000000000000000000000000000000000000000000000000383 187.0
CMS3_k127_34418_13 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000002006 173.0
CMS3_k127_34418_14 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000006367 93.0
CMS3_k127_34418_15 peroxiredoxin activity K01607 - 4.1.1.44 0.00000000002195 65.0
CMS3_k127_34418_2 Cysteine-rich domain - - - 7.525e-206 651.0
CMS3_k127_34418_3 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 3.794e-200 632.0
CMS3_k127_34418_4 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 552.0
CMS3_k127_34418_5 Beta-lactamase domain protein K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 508.0
CMS3_k127_34418_6 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 447.0
CMS3_k127_34418_7 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 387.0
CMS3_k127_34418_8 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 290.0
CMS3_k127_34418_9 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001305 273.0
CMS3_k127_3512124_0 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000008507 235.0
CMS3_k127_3512124_1 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000005818 169.0
CMS3_k127_3512124_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000006798 72.0
CMS3_k127_3512124_3 17 kDa surface antigen - - - 0.00000000002297 73.0
CMS3_k127_3514071_0 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 331.0
CMS3_k127_3514071_1 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 313.0
CMS3_k127_3514071_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 289.0
CMS3_k127_3544065_0 Domain of unknown function (DUF4445) - - - 1.934e-318 986.0
CMS3_k127_3544065_1 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 469.0
CMS3_k127_3544065_2 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 428.0
CMS3_k127_3544065_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008418 255.0
CMS3_k127_3544065_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000006694 248.0
CMS3_k127_3544065_5 Virulence factor - - - 0.0000000000000000000002164 97.0
CMS3_k127_3558244_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 2.334e-270 839.0
CMS3_k127_3569049_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.767e-222 696.0
CMS3_k127_3569049_1 Tripartite tricarboxylate transporter TctA family - - - 4.031e-206 657.0
CMS3_k127_3569049_10 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000007275 225.0
CMS3_k127_3569049_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000008078 228.0
CMS3_k127_3569049_12 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000001974 225.0
CMS3_k127_3569049_13 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000000000000000188 170.0
CMS3_k127_3569049_14 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000004616 155.0
CMS3_k127_3569049_15 Staphylococcal nuclease homologues K16561 - - 0.00000000000000000000000000000000000002486 156.0
CMS3_k127_3569049_16 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000001619 118.0
CMS3_k127_3569049_17 PFAM PQQ enzyme repeat - - - 0.00000000000000000003038 105.0
CMS3_k127_3569049_18 PAS domain K07716 - 2.7.13.3 0.000000009717 64.0
CMS3_k127_3569049_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 544.0
CMS3_k127_3569049_3 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 565.0
CMS3_k127_3569049_4 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 512.0
CMS3_k127_3569049_5 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 452.0
CMS3_k127_3569049_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 405.0
CMS3_k127_3569049_7 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 407.0
CMS3_k127_3569049_8 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 342.0
CMS3_k127_3569049_9 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 297.0
CMS3_k127_3571049_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 460.0
CMS3_k127_3571049_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 384.0
CMS3_k127_3571049_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 373.0
CMS3_k127_3571049_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002447 285.0
CMS3_k127_3571049_4 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000003044 241.0
CMS3_k127_3571049_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000148 79.0
CMS3_k127_364921_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1433.0
CMS3_k127_364921_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 362.0
CMS3_k127_364921_10 Protein of unknown function (DUF2892) - - - 0.00000000000000000000002309 104.0
CMS3_k127_364921_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 352.0
CMS3_k127_364921_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 293.0
CMS3_k127_364921_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005087 281.0
CMS3_k127_364921_5 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000006713 203.0
CMS3_k127_364921_6 surface antigen - - - 0.00000000000000000000000000000000000000000000000004222 183.0
CMS3_k127_364921_7 - - - - 0.00000000000000000000000000000000000000000001077 168.0
CMS3_k127_364921_8 Molecular chaperone - - - 0.0000000000000000000000000000000000006387 142.0
CMS3_k127_364921_9 - - - - 0.00000000000000000000000000002258 120.0
CMS3_k127_3728067_0 PFAM transposase, IS4 family protein - - - 5.321e-206 656.0
CMS3_k127_3751468_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 548.0
CMS3_k127_3751468_1 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 524.0
CMS3_k127_3751468_10 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000001331 233.0
CMS3_k127_3751468_11 Putative bacterial sensory transduction regulator - - - 0.0000000000000000000000000000000000000000000000000000000112 211.0
CMS3_k127_3751468_12 Aminoacyl-tRNA editing domain K01284 - 3.4.15.5 0.00000000000000000000000000000000000000000000000000000169 208.0
CMS3_k127_3751468_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001602 189.0
CMS3_k127_3751468_14 Putative tRNA binding domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000004654 186.0
CMS3_k127_3751468_15 Phasin protein - - - 0.0000000000000000000000000000000000001878 148.0
CMS3_k127_3751468_16 - - - - 0.000000000000000000000000000000001636 143.0
CMS3_k127_3751468_17 protein conserved in bacteria K09806 - - 0.0000000000000000000000000009103 117.0
CMS3_k127_3751468_2 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 523.0
CMS3_k127_3751468_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K01784,K03274 - 5.1.3.2,5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 464.0
CMS3_k127_3751468_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 426.0
CMS3_k127_3751468_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 390.0
CMS3_k127_3751468_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 362.0
CMS3_k127_3751468_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 296.0
CMS3_k127_3751468_8 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001423 302.0
CMS3_k127_3751468_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003805 279.0
CMS3_k127_3757142_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1491.0
CMS3_k127_3757142_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 414.0
CMS3_k127_3757142_2 Cupin domain - - - 0.0000003439 52.0
CMS3_k127_3793254_0 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 493.0
CMS3_k127_3793254_1 signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 413.0
CMS3_k127_3807023_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.517e-230 721.0
CMS3_k127_3807023_1 ABC1 family - - - 3.328e-198 627.0
CMS3_k127_3807023_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 545.0
CMS3_k127_3807023_3 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000007746 192.0
CMS3_k127_3807023_4 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000001399 178.0
CMS3_k127_3807023_5 peroxiredoxin activity K01607 - 4.1.1.44 0.000000000000000000004329 96.0
CMS3_k127_3807023_6 - - - - 0.00000001619 61.0
CMS3_k127_3830863_0 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 545.0
CMS3_k127_3830863_1 protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 569.0
CMS3_k127_3830863_10 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 343.0
CMS3_k127_3830863_11 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 302.0
CMS3_k127_3830863_12 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003417 252.0
CMS3_k127_3830863_13 MarR family - - - 0.00000000000000000000000000000000000000000000001252 177.0
CMS3_k127_3830863_14 - - - - 0.00000000000000000000000000000000000000000512 164.0
CMS3_k127_3830863_15 - - - - 0.000000000000000000000000000000000001676 145.0
CMS3_k127_3830863_16 Ribbon-helix-helix domain - - - 0.0000000000001549 80.0
CMS3_k127_3830863_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 495.0
CMS3_k127_3830863_3 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 491.0
CMS3_k127_3830863_4 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 439.0
CMS3_k127_3830863_5 Subtilase family K17734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 417.0
CMS3_k127_3830863_6 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 390.0
CMS3_k127_3830863_7 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 384.0
CMS3_k127_3830863_8 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 382.0
CMS3_k127_3830863_9 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 370.0
CMS3_k127_3838434_0 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 555.0
CMS3_k127_3838434_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001599 287.0
CMS3_k127_3838434_2 of the double-stranded beta helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006683 297.0
CMS3_k127_3838434_3 Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000001021 152.0
CMS3_k127_3838434_4 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000000003352 66.0
CMS3_k127_3838434_5 HNH endonuclease K07451 - - 0.0008097 47.0
CMS3_k127_3845359_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 3.028e-251 789.0
CMS3_k127_3845359_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 519.0
CMS3_k127_3845359_2 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 378.0
CMS3_k127_3845359_3 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 375.0
CMS3_k127_3845359_4 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 361.0
CMS3_k127_3845359_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 305.0
CMS3_k127_3845359_6 Sulfatase-modifying factor enzyme 1 K20333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 302.0
CMS3_k127_3845359_7 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000006428 200.0
CMS3_k127_3845359_8 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000000008429 192.0
CMS3_k127_3845359_9 - - - - 0.000000000000000000000000000000000000000000000001224 184.0
CMS3_k127_3848743_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 444.0
CMS3_k127_3848743_1 YGGT family K02221 - - 0.000000000000000000000000000001505 123.0
CMS3_k127_3848743_2 NnrU protein - - - 0.000000000000000000000000001021 116.0
CMS3_k127_3848743_3 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000000003301 113.0
CMS3_k127_3848743_4 Protein of unknown function (DUF3253) - - - 0.0000000000000000001011 94.0
CMS3_k127_3880139_0 transglutaminase domain protein - - - 1.023e-308 962.0
CMS3_k127_3880139_1 DNA helicase K03654 - 3.6.4.12 8.298e-250 787.0
CMS3_k127_3880139_2 dehydratase K01685 - 4.2.1.7 1.144e-231 726.0
CMS3_k127_3880139_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 8.731e-216 681.0
CMS3_k127_3880139_4 TRAP-type C4-dicarboxylate transport system, large permease component - - - 5.582e-210 659.0
CMS3_k127_3880139_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 493.0
CMS3_k127_3880139_6 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 397.0
CMS3_k127_3880139_7 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 366.0
CMS3_k127_3880139_8 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003282 267.0
CMS3_k127_3880139_9 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00000000000000000000000000000000000000000000000000000000001998 214.0
CMS3_k127_3893675_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.231e-251 790.0
CMS3_k127_3893675_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 409.0
CMS3_k127_3893675_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000000000002349 189.0
CMS3_k127_3893675_3 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000004864 146.0
CMS3_k127_3893675_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000001862 138.0
CMS3_k127_3893675_5 - - - - 0.0000000000000000308 84.0
CMS3_k127_3907325_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1417.0
CMS3_k127_3907325_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1296.0
CMS3_k127_3907325_10 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K01769 - 4.6.1.1,4.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 385.0
CMS3_k127_3907325_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 331.0
CMS3_k127_3907325_12 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007108 337.0
CMS3_k127_3907325_13 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 323.0
CMS3_k127_3907325_14 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 310.0
CMS3_k127_3907325_15 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008088 310.0
CMS3_k127_3907325_16 ABC-type Mn2 Zn2 transport systems permease components K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 311.0
CMS3_k127_3907325_17 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 300.0
CMS3_k127_3907325_18 COG4531 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 295.0
CMS3_k127_3907325_19 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000000000000000000000000000000000000000000000000000000000000001238 229.0
CMS3_k127_3907325_2 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 3.222e-244 765.0
CMS3_k127_3907325_20 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000008669 222.0
CMS3_k127_3907325_21 Belongs to the Fur family K09823 - - 0.000000000000000000000000000000000000000000000000000000009448 205.0
CMS3_k127_3907325_22 SOS response K14160 - - 0.0000000000000000000000000000000000000000000000000003566 198.0
CMS3_k127_3907325_23 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000204 203.0
CMS3_k127_3907325_24 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000001167 149.0
CMS3_k127_3907325_25 COG2346, Truncated hemoglobins K03406,K06886 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057 - 0.000000000000000000000000000000008412 132.0
CMS3_k127_3907325_26 SMART Water Stress and Hypersensitive response domain protein - - - 0.000000000000000000000006594 108.0
CMS3_k127_3907325_27 ParB-like nuclease domain - - - 0.000000000000000000001735 98.0
CMS3_k127_3907325_28 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00000000000000000003109 95.0
CMS3_k127_3907325_29 Plasmid stability protein K21495 - - 0.0006436 46.0
CMS3_k127_3907325_3 Aldehyde dehydrogenase family K00128 - 1.2.1.3 3.967e-237 741.0
CMS3_k127_3907325_4 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009702 584.0
CMS3_k127_3907325_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 481.0
CMS3_k127_3907325_6 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 439.0
CMS3_k127_3907325_7 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 421.0
CMS3_k127_3907325_8 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 402.0
CMS3_k127_3907325_9 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 391.0
CMS3_k127_3910484_0 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 458.0
CMS3_k127_3910484_1 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 453.0
CMS3_k127_3910484_10 Protein of unknown function (DUF2380) - - - 0.0000000000000000000000000000000000000000000000005961 180.0
CMS3_k127_3910484_11 - - - - 0.000000000000000000000000000000000000003919 163.0
CMS3_k127_3910484_12 - - - - 0.00000000000000000001114 93.0
CMS3_k127_3910484_2 SMP-30/Gluconolaconase/LRE-like region K01053,K02352 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 446.0
CMS3_k127_3910484_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 422.0
CMS3_k127_3910484_4 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 406.0
CMS3_k127_3910484_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009854 348.0
CMS3_k127_3910484_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 334.0
CMS3_k127_3910484_7 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 308.0
CMS3_k127_3910484_8 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 303.0
CMS3_k127_3910484_9 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004026 280.0
CMS3_k127_3931956_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 595.0
CMS3_k127_3931956_1 prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 391.0
CMS3_k127_3931956_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 408.0
CMS3_k127_3931956_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 350.0
CMS3_k127_3931956_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 299.0
CMS3_k127_3931956_5 methionine biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000002106 212.0
CMS3_k127_3931956_6 chorismate mutase - - - 0.0000000000000000000000000000000000000000000001888 179.0
CMS3_k127_3931956_7 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000002633 92.0
CMS3_k127_3938736_0 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 314.0
CMS3_k127_3938736_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000001243 173.0
CMS3_k127_3972755_0 Belongs to the thiolase family K00626 - 2.3.1.9 4.575e-203 637.0
CMS3_k127_3972755_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 397.0
CMS3_k127_3972755_2 alpha/beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 400.0
CMS3_k127_3972755_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000001641 184.0
CMS3_k127_3974984_0 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0 1155.0
CMS3_k127_3974984_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1050.0
CMS3_k127_3974984_10 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 582.0
CMS3_k127_3974984_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 570.0
CMS3_k127_3974984_12 reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 507.0
CMS3_k127_3974984_13 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 483.0
CMS3_k127_3974984_14 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 482.0
CMS3_k127_3974984_15 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 487.0
CMS3_k127_3974984_16 Ornithine cyclodeaminase/mu-crystallin family K01750,K19743 - 1.5.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 453.0
CMS3_k127_3974984_17 ABC transporter, ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 426.0
CMS3_k127_3974984_18 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 425.0
CMS3_k127_3974984_19 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 424.0
CMS3_k127_3974984_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.306e-287 893.0
CMS3_k127_3974984_20 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 428.0
CMS3_k127_3974984_21 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 406.0
CMS3_k127_3974984_22 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008115 403.0
CMS3_k127_3974984_23 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 392.0
CMS3_k127_3974984_24 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 387.0
CMS3_k127_3974984_25 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 392.0
CMS3_k127_3974984_26 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 354.0
CMS3_k127_3974984_27 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 351.0
CMS3_k127_3974984_28 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 347.0
CMS3_k127_3974984_29 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 324.0
CMS3_k127_3974984_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 6.9e-267 830.0
CMS3_k127_3974984_30 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000072 331.0
CMS3_k127_3974984_31 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 310.0
CMS3_k127_3974984_32 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004101 279.0
CMS3_k127_3974984_33 Protein conserved in bacteria K09774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000691 276.0
CMS3_k127_3974984_34 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000004138 263.0
CMS3_k127_3974984_35 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005989 248.0
CMS3_k127_3974984_36 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003145 243.0
CMS3_k127_3974984_37 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000003512 254.0
CMS3_k127_3974984_38 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000000000002292 206.0
CMS3_k127_3974984_39 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000000000000006072 203.0
CMS3_k127_3974984_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 9.681e-255 790.0
CMS3_k127_3974984_40 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000000000008401 203.0
CMS3_k127_3974984_41 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001322 205.0
CMS3_k127_3974984_42 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000000000000000000000000000000000001753 206.0
CMS3_k127_3974984_43 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000000000000000000000000000000000009737 207.0
CMS3_k127_3974984_44 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000008068 182.0
CMS3_k127_3974984_45 COG1525 Micrococcal nuclease (thermonuclease) homologs K16561 - - 0.00000000000000000000000000000000000000000000001868 178.0
CMS3_k127_3974984_46 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000002702 171.0
CMS3_k127_3974984_47 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000004904 163.0
CMS3_k127_3974984_48 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000005788 146.0
CMS3_k127_3974984_5 Histidine kinase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 3.688e-252 801.0
CMS3_k127_3974984_50 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000003786 112.0
CMS3_k127_3974984_51 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000002078 108.0
CMS3_k127_3974984_52 COG1925 Phosphotransferase system, HPr-related proteins K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.000000000000000000000002828 111.0
CMS3_k127_3974984_53 Membrane transport protein MerF - - - 0.000000000000000000004151 94.0
CMS3_k127_3974984_54 Lipopolysaccharide assembly protein A domain - - - 0.0000000000000000006318 90.0
CMS3_k127_3974984_55 Short C-terminal domain K08982 - - 0.000000000000000002164 92.0
CMS3_k127_3974984_56 Protein of unknown function (FYDLN_acid) - - - 0.0000000000000006704 83.0
CMS3_k127_3974984_57 Protein of unknown function (DUF1150) - - - 0.0000000001172 68.0
CMS3_k127_3974984_6 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.658e-230 728.0
CMS3_k127_3974984_7 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.067e-226 707.0
CMS3_k127_3974984_8 Histidine kinase K14980 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 6.774e-199 635.0
CMS3_k127_3974984_9 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 597.0
CMS3_k127_3991686_0 Belongs to the TPP enzyme family K03852 - 2.3.3.15 0.0 1036.0
CMS3_k127_3991686_1 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 0.0 1004.0
CMS3_k127_3991686_10 Biotin carboxylase C-terminal domain - - - 5.196e-205 646.0
CMS3_k127_3991686_11 Bacterial extracellular solute-binding protein K17315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 607.0
CMS3_k127_3991686_12 Monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 599.0
CMS3_k127_3991686_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 580.0
CMS3_k127_3991686_14 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 553.0
CMS3_k127_3991686_15 COG1879 ABC-type sugar transport system, periplasmic component K11930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 547.0
CMS3_k127_3991686_16 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 536.0
CMS3_k127_3991686_17 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 529.0
CMS3_k127_3991686_18 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 511.0
CMS3_k127_3991686_19 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 499.0
CMS3_k127_3991686_2 TRAP transporter, 4TM 12TM fusion protein - - - 2.754e-257 807.0
CMS3_k127_3991686_20 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 502.0
CMS3_k127_3991686_21 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 492.0
CMS3_k127_3991686_22 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 474.0
CMS3_k127_3991686_23 ABC-type sugar transport system, permease component K17317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 447.0
CMS3_k127_3991686_24 Peptidase family M28 K02083 - 3.5.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 467.0
CMS3_k127_3991686_25 Branched-chain amino acid transport system / permease component K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 452.0
CMS3_k127_3991686_26 Carboxyltransferase domain, subdomain C and D K01941 - 6.3.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 466.0
CMS3_k127_3991686_27 ABC-type sugar transport system, permease component K02026,K17323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 443.0
CMS3_k127_3991686_28 transport system periplasmic component K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 437.0
CMS3_k127_3991686_29 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 417.0
CMS3_k127_3991686_3 Thi4 family K03119,K07256 - 1.14.11.17 5.453e-257 801.0
CMS3_k127_3991686_30 COG1175 ABC-type sugar transport systems permease components K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 419.0
CMS3_k127_3991686_31 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 411.0
CMS3_k127_3991686_32 COG1175 ABC-type sugar transport systems, permease components K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 430.0
CMS3_k127_3991686_33 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 404.0
CMS3_k127_3991686_34 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 406.0
CMS3_k127_3991686_35 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 417.0
CMS3_k127_3991686_36 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 384.0
CMS3_k127_3991686_37 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 370.0
CMS3_k127_3991686_38 transcriptional regulator K02624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 359.0
CMS3_k127_3991686_39 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 357.0
CMS3_k127_3991686_4 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 8.058e-249 781.0
CMS3_k127_3991686_40 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 369.0
CMS3_k127_3991686_41 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 373.0
CMS3_k127_3991686_42 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 321.0
CMS3_k127_3991686_43 3-beta hydroxysteroid dehydrogenase/isomerase family K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 314.0
CMS3_k127_3991686_44 Beta-lactamase superfamily domain K03476 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 312.0
CMS3_k127_3991686_45 Asp/Glu/Hydantoin racemase K16841 - 5.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009572 304.0
CMS3_k127_3991686_46 Belongs to the HpcH HpaI aldolase family K01630,K02510 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0008150,GO:0008152,GO:0016829,GO:0016830,GO:0016832,GO:0044238,GO:0044424,GO:0044464,GO:0071704 4.1.2.20,4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 288.0
CMS3_k127_3991686_47 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002263 275.0
CMS3_k127_3991686_48 FadR C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002492 248.0
CMS3_k127_3991686_49 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001538 246.0
CMS3_k127_3991686_5 Bacterial extracellular solute-binding protein K02027 - - 5.613e-227 711.0
CMS3_k127_3991686_50 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002086 246.0
CMS3_k127_3991686_51 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000003573 233.0
CMS3_k127_3991686_52 Dehydroquinase class II K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000001779 244.0
CMS3_k127_3991686_53 SnoaL-like polyketide cyclase K07255 - - 0.00000000000000000000000000000000000000000000000000000000001431 211.0
CMS3_k127_3991686_54 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000001835 205.0
CMS3_k127_3991686_55 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001087 192.0
CMS3_k127_3991686_56 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.000000000000000000000000000000000000000000000009793 175.0
CMS3_k127_3991686_57 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.000000000000000000000000000000003617 136.0
CMS3_k127_3991686_58 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA - - - 0.00000000000000000000000007596 119.0
CMS3_k127_3991686_59 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000004342 53.0
CMS3_k127_3991686_6 Receptor family ligand binding region K01999 - - 7.863e-213 666.0
CMS3_k127_3991686_60 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.000004442 53.0
CMS3_k127_3991686_61 DEAD/H associated K03724 - - 0.0007647 44.0
CMS3_k127_3991686_7 TIGRFAM TRAP transporter, DctM subunit - - - 1.639e-212 673.0
CMS3_k127_3991686_8 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.165e-211 664.0
CMS3_k127_3991686_9 Mandelate racemase muconate lactonizing enzyme K20023 - 4.2.1.156,4.2.1.42 1.143e-209 656.0
CMS3_k127_4067297_0 Oligopeptide/dipeptide transporter, C-terminal region - - - 5e-324 1008.0
CMS3_k127_4067297_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 1.933e-235 745.0
CMS3_k127_4067297_2 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 524.0
CMS3_k127_4067297_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 392.0
CMS3_k127_4067297_4 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 371.0
CMS3_k127_4067297_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000008962 247.0
CMS3_k127_4067297_6 chemotaxis protein K03414 - - 0.000000000000000000000000000000000000000000000000001837 191.0
CMS3_k127_4067297_8 - - - - 0.00000000000005881 76.0
CMS3_k127_4097872_0 Putative amidoligase enzyme (DUF2126) - - - 1.677e-285 887.0
CMS3_k127_4097872_1 A predicted alpha-helical domain with a conserved ER motif. - - - 5.972e-275 872.0
CMS3_k127_4097872_10 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 337.0
CMS3_k127_4097872_11 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 304.0
CMS3_k127_4097872_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001197 229.0
CMS3_k127_4097872_13 - - - - 0.0000000000000000000000000000000000000000000000000000001799 197.0
CMS3_k127_4097872_14 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000008208 201.0
CMS3_k127_4097872_15 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000006557 181.0
CMS3_k127_4097872_16 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000003846 183.0
CMS3_k127_4097872_17 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000006776 158.0
CMS3_k127_4097872_19 beta-lactamase activity K07126 - - 0.000000000005321 76.0
CMS3_k127_4097872_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 602.0
CMS3_k127_4097872_20 Antibiotic biosynthesis monooxygenase - - - 0.000000002402 68.0
CMS3_k127_4097872_21 Transposase - - - 0.00007774 45.0
CMS3_k127_4097872_3 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 509.0
CMS3_k127_4097872_4 Belongs to the LDH2 MDH2 oxidoreductase family K00073,K13574 - 1.1.1.350 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 431.0
CMS3_k127_4097872_5 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 437.0
CMS3_k127_4097872_6 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 444.0
CMS3_k127_4097872_7 Glutaminase K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 381.0
CMS3_k127_4097872_8 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 342.0
CMS3_k127_4097872_9 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 328.0
CMS3_k127_4119720_0 Peptidase family M28 K02083 - 3.5.3.9 1.067e-221 692.0
CMS3_k127_4119720_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 559.0
CMS3_k127_4119720_2 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 492.0
CMS3_k127_4119720_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 469.0
CMS3_k127_4119720_4 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 421.0
CMS3_k127_4119720_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 421.0
CMS3_k127_4119720_6 Peptidase family M28 K02083 - 3.5.3.9 0.00000000000001386 74.0
CMS3_k127_4168584_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1035.0
CMS3_k127_4168584_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.23e-304 946.0
CMS3_k127_4168584_10 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 525.0
CMS3_k127_4168584_11 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 511.0
CMS3_k127_4168584_12 MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 499.0
CMS3_k127_4168584_13 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 516.0
CMS3_k127_4168584_14 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 505.0
CMS3_k127_4168584_15 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 497.0
CMS3_k127_4168584_16 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 480.0
CMS3_k127_4168584_17 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 475.0
CMS3_k127_4168584_18 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 484.0
CMS3_k127_4168584_19 flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 455.0
CMS3_k127_4168584_2 ABC-type multidrug transport system, ATPase and permease K06147 - - 2.452e-252 792.0
CMS3_k127_4168584_20 fructose-bisphosphate aldolase K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 445.0
CMS3_k127_4168584_21 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 417.0
CMS3_k127_4168584_22 Protein conserved in bacteria K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 417.0
CMS3_k127_4168584_23 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 415.0
CMS3_k127_4168584_24 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 402.0
CMS3_k127_4168584_25 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 405.0
CMS3_k127_4168584_26 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 387.0
CMS3_k127_4168584_27 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 373.0
CMS3_k127_4168584_28 KR domain K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 371.0
CMS3_k127_4168584_29 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 388.0
CMS3_k127_4168584_3 COG0471 Di- and tricarboxylate transporters - - - 1.504e-238 751.0
CMS3_k127_4168584_30 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 364.0
CMS3_k127_4168584_31 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 355.0
CMS3_k127_4168584_32 COG0811 Biopolymer transport proteins K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 335.0
CMS3_k127_4168584_33 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 336.0
CMS3_k127_4168584_34 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 342.0
CMS3_k127_4168584_35 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008364 311.0
CMS3_k127_4168584_36 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 299.0
CMS3_k127_4168584_37 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 291.0
CMS3_k127_4168584_38 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005509 280.0
CMS3_k127_4168584_39 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003476 272.0
CMS3_k127_4168584_4 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.788e-230 749.0
CMS3_k127_4168584_40 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000004851 237.0
CMS3_k127_4168584_41 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000004217 236.0
CMS3_k127_4168584_42 Protein of unknown function (DUF429) - - - 0.00000000000000000000000000000000000000000000000000000000000000001344 232.0
CMS3_k127_4168584_43 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000004317 212.0
CMS3_k127_4168584_44 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000004584 214.0
CMS3_k127_4168584_45 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.000000000000000000000000000000000000000000000000000000002086 205.0
CMS3_k127_4168584_46 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000108 210.0
CMS3_k127_4168584_47 biopolymer transport protein K03559,K03560 - - 0.000000000000000000000000000000000000000000000000000002562 196.0
CMS3_k127_4168584_48 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000009487 193.0
CMS3_k127_4168584_49 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000002576 194.0
CMS3_k127_4168584_5 COG2873 O-acetylhomoserine sulfhydrylase - - - 1.734e-220 691.0
CMS3_k127_4168584_50 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000001985 185.0
CMS3_k127_4168584_51 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003353 171.0
CMS3_k127_4168584_52 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000007076 168.0
CMS3_k127_4168584_53 Paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000000002035 164.0
CMS3_k127_4168584_54 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000001055 160.0
CMS3_k127_4168584_55 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000001149 152.0
CMS3_k127_4168584_56 thioesterase' K07107 - - 0.0000000000000000000000000000000003785 148.0
CMS3_k127_4168584_57 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000007756 140.0
CMS3_k127_4168584_58 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000000008655 131.0
CMS3_k127_4168584_59 - - - - 0.00000000000000000000000000000004779 129.0
CMS3_k127_4168584_6 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.705e-213 669.0
CMS3_k127_4168584_60 Protein of unknown function (DUF1465) K13592 - - 0.000000000000000000000000000001627 126.0
CMS3_k127_4168584_61 PFAM CcdB protein K19163 - - 0.000000000000000000000000005082 113.0
CMS3_k127_4168584_62 - - - - 0.00000000000000000000000017 111.0
CMS3_k127_4168584_63 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.00000000000000000000001225 114.0
CMS3_k127_4168584_64 - - - - 0.0000000000000000000004531 98.0
CMS3_k127_4168584_65 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000004893 99.0
CMS3_k127_4168584_66 Transcriptional - - - 0.00000000000000002537 93.0
CMS3_k127_4168584_67 Post-segregation antitoxin CcdA K19164 - - 0.00000000000108 71.0
CMS3_k127_4168584_68 Domain of unknown function (DUF1127) - - - 0.00000000008467 65.0
CMS3_k127_4168584_7 Involved in the TonB-independent uptake of proteins K03641 - - 1.865e-207 670.0
CMS3_k127_4168584_70 - - - - 0.00000002763 65.0
CMS3_k127_4168584_71 Protein of unknown function (DUF1192) - - - 0.00000007644 64.0
CMS3_k127_4168584_8 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 613.0
CMS3_k127_4168584_9 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 597.0
CMS3_k127_4207327_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1507.0
CMS3_k127_4207327_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 1.178e-285 899.0
CMS3_k127_4207327_10 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 468.0
CMS3_k127_4207327_11 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 479.0
CMS3_k127_4207327_12 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 427.0
CMS3_k127_4207327_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 398.0
CMS3_k127_4207327_14 D-ala D-ala ligase C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 413.0
CMS3_k127_4207327_15 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 387.0
CMS3_k127_4207327_16 DMSO reductase anchor subunit (DmsC) K21309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 370.0
CMS3_k127_4207327_17 4Fe-4S dicluster domain K00124,K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 386.0
CMS3_k127_4207327_18 Putative amidoligase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 350.0
CMS3_k127_4207327_19 COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 340.0
CMS3_k127_4207327_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00244 - 1.3.5.4 1.462e-283 883.0
CMS3_k127_4207327_20 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 342.0
CMS3_k127_4207327_21 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 334.0
CMS3_k127_4207327_22 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 324.0
CMS3_k127_4207327_23 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 313.0
CMS3_k127_4207327_24 )-tartrate dehydratase K03780 GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896 4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005186 286.0
CMS3_k127_4207327_25 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002604 282.0
CMS3_k127_4207327_26 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008944 263.0
CMS3_k127_4207327_27 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
CMS3_k127_4207327_28 Dicarboxylate transport - - - 0.0000000000000000000000000000000000000000000000000000000000000001518 251.0
CMS3_k127_4207327_29 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000005006 219.0
CMS3_k127_4207327_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 3.941e-265 825.0
CMS3_k127_4207327_30 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.000000000000000000000000000000000000000000000000001037 186.0
CMS3_k127_4207327_31 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000001802 194.0
CMS3_k127_4207327_32 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000002274 168.0
CMS3_k127_4207327_33 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000001033 164.0
CMS3_k127_4207327_34 XdhC and CoxI family - - - 0.000000000000000000000000000000000000003824 164.0
CMS3_k127_4207327_35 Protein of unknown function (DUF1318) - - - 0.0000000000000000000000000005092 116.0
CMS3_k127_4207327_36 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00247 - - 0.000000000000000000000000002634 120.0
CMS3_k127_4207327_37 Polymer-forming cytoskeletal - - - 0.0000000000000000000000008018 111.0
CMS3_k127_4207327_38 succinate dehydrogenase K00246 - - 0.000000000000000000000003577 117.0
CMS3_k127_4207327_39 YnbE-like lipoprotein - - - 0.0000000000000002476 81.0
CMS3_k127_4207327_4 PFAM Histone deacetylase - - - 9.45e-200 634.0
CMS3_k127_4207327_5 lysine 2,3-aminomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 605.0
CMS3_k127_4207327_6 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 614.0
CMS3_k127_4207327_7 COG1951 Tartrate dehydratase alpha subunit Fumarate hydratase class I, N-terminal domain K01677,K03779 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 542.0
CMS3_k127_4207327_8 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 530.0
CMS3_k127_4207327_9 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 481.0
CMS3_k127_426789_0 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 619.0
CMS3_k127_426789_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 362.0
CMS3_k127_426789_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002423 222.0
CMS3_k127_426789_3 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000000000007947 167.0
CMS3_k127_426789_4 Usg-like family - - - 0.00000000000000000000013 102.0
CMS3_k127_4330250_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 0.0 1161.0
CMS3_k127_4330250_1 Aerotolerance regulator N-terminal - - - 8.343e-315 989.0
CMS3_k127_4330250_10 CO dehydrogenase flavoprotein C-terminal domain K13481 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 535.0
CMS3_k127_4330250_11 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 516.0
CMS3_k127_4330250_12 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 504.0
CMS3_k127_4330250_13 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 503.0
CMS3_k127_4330250_14 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 509.0
CMS3_k127_4330250_15 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 483.0
CMS3_k127_4330250_16 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 473.0
CMS3_k127_4330250_17 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 499.0
CMS3_k127_4330250_18 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 458.0
CMS3_k127_4330250_19 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 462.0
CMS3_k127_4330250_2 TonB-dependent receptor, beta-barrel - - - 1.218e-271 876.0
CMS3_k127_4330250_20 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 449.0
CMS3_k127_4330250_21 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
CMS3_k127_4330250_22 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 394.0
CMS3_k127_4330250_23 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 392.0
CMS3_k127_4330250_24 Aldo keto - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 383.0
CMS3_k127_4330250_25 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 377.0
CMS3_k127_4330250_26 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 370.0
CMS3_k127_4330250_27 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 358.0
CMS3_k127_4330250_28 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
CMS3_k127_4330250_29 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 342.0
CMS3_k127_4330250_3 membrane - - - 1.171e-262 826.0
CMS3_k127_4330250_30 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 341.0
CMS3_k127_4330250_31 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 320.0
CMS3_k127_4330250_32 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 303.0
CMS3_k127_4330250_33 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 319.0
CMS3_k127_4330250_34 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007774 282.0
CMS3_k127_4330250_35 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001468 276.0
CMS3_k127_4330250_36 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008875 265.0
CMS3_k127_4330250_37 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001114 284.0
CMS3_k127_4330250_38 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005274 261.0
CMS3_k127_4330250_39 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000003616 248.0
CMS3_k127_4330250_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.361e-213 669.0
CMS3_k127_4330250_40 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000008744 220.0
CMS3_k127_4330250_41 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000001103 214.0
CMS3_k127_4330250_42 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000015 218.0
CMS3_k127_4330250_43 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000009394 210.0
CMS3_k127_4330250_44 Protein of unknown function (DUF1285) K09986 - - 0.0000000000000000000000000000000000000000000000000000000001745 227.0
CMS3_k127_4330250_45 - - - - 0.0000000000000000000000000000000000000000000000000000001474 201.0
CMS3_k127_4330250_46 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000009216 200.0
CMS3_k127_4330250_47 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000003602 199.0
CMS3_k127_4330250_48 DoxX K15977 - - 0.000000000000000000000000000000000000000000000000000007272 193.0
CMS3_k127_4330250_49 Polysaccharide deacetylase K00365,K01452 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.41 0.00000000000000000000000000000000000000000000000000005251 193.0
CMS3_k127_4330250_5 A circularly permuted ATPgrasp - - - 5.368e-213 694.0
CMS3_k127_4330250_50 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.000000000000000000000000000000000000000000000001945 187.0
CMS3_k127_4330250_51 - - - - 0.000000000000000000000000000000000000000000000002751 182.0
CMS3_k127_4330250_52 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000002493 171.0
CMS3_k127_4330250_53 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000000000000000000000003027 167.0
CMS3_k127_4330250_54 Protein of unknown function (DUF2852) - - - 0.00000000000000000000000000000000000002346 147.0
CMS3_k127_4330250_55 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000007944 138.0
CMS3_k127_4330250_57 NUDIX domain - - - 0.0000000000000002878 83.0
CMS3_k127_4330250_58 NUDIX hydrolase - - - 0.000000001428 59.0
CMS3_k127_4330250_59 - - - - 0.000005109 55.0
CMS3_k127_4330250_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056 - 3.6.3.17 1.003e-201 644.0
CMS3_k127_4330250_60 Polysaccharide deacetylase K01452 - 3.5.1.41 0.0005346 44.0
CMS3_k127_4330250_7 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007237 551.0
CMS3_k127_4330250_8 Amidohydrolase family K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 560.0
CMS3_k127_4330250_9 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 545.0
CMS3_k127_4332204_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 - 4.2.1.46,4.2.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 537.0
CMS3_k127_4332204_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 353.0
CMS3_k127_4342370_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1136.0
CMS3_k127_4342370_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 505.0
CMS3_k127_4342370_10 chemotaxis protein - - - 0.0000002076 56.0
CMS3_k127_4342370_11 RESPONSE REGULATOR receiver - - - 0.0002651 49.0
CMS3_k127_4342370_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 497.0
CMS3_k127_4342370_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 392.0
CMS3_k127_4342370_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 385.0
CMS3_k127_4342370_5 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000004674 213.0
CMS3_k127_4342370_6 Protein of unknown function (DUF1203) - - - 0.00000000000000000000000000000000000000000000000003036 199.0
CMS3_k127_4342370_7 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.0000000000000000000000000002338 128.0
CMS3_k127_4342370_8 Protein conserved in bacteria K09780 - - 0.00000000000000000000000002377 111.0
CMS3_k127_4342370_9 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000004825 106.0
CMS3_k127_4444784_0 CoA-transferase family III K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 485.0
CMS3_k127_4444784_1 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000009468 149.0
CMS3_k127_4444784_2 Long-chain fatty aldehyde decarbonylase - - - 0.0000000000007448 77.0
CMS3_k127_4496229_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 588.0
CMS3_k127_4496229_1 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 467.0
CMS3_k127_4496229_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 445.0
CMS3_k127_4496229_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 355.0
CMS3_k127_4496229_4 Molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 251.0
CMS3_k127_4496229_6 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000000000001614 173.0
CMS3_k127_4496229_7 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000001099 154.0
CMS3_k127_4496229_8 Dopa 4,5-dioxygenase family K10253 - - 0.0000000000000000000000000000000001312 135.0
CMS3_k127_4496229_9 MerR HTH family regulatory protein K18997 - - 0.0000000000000000000000005105 109.0
CMS3_k127_454305_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1042.0
CMS3_k127_454305_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.845e-310 976.0
CMS3_k127_454305_10 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000005283 202.0
CMS3_k127_454305_11 transcriptional - - - 0.00000000000000000000000000000000000000000000000000004423 190.0
CMS3_k127_454305_12 nucleic-acid-binding protein implicated in transcription termination K07742 - - 0.00000000000000000000000000000000000000000000000000007421 195.0
CMS3_k127_454305_13 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000001253 174.0
CMS3_k127_454305_14 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000009621 151.0
CMS3_k127_454305_15 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000006368 146.0
CMS3_k127_454305_16 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000004677 147.0
CMS3_k127_454305_2 Participates in both transcription termination and antitermination K02600 - - 4.271e-241 754.0
CMS3_k127_454305_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.911e-206 650.0
CMS3_k127_454305_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 520.0
CMS3_k127_454305_5 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 444.0
CMS3_k127_454305_6 Domain of unknown function DUF21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 414.0
CMS3_k127_454305_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 385.0
CMS3_k127_454305_8 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 374.0
CMS3_k127_454305_9 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000006284 251.0
CMS3_k127_4675201_0 Multicopper oxidase - - - 0.0 2261.0
CMS3_k127_4675201_1 Cytochrome D1 heme domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 596.0
CMS3_k127_4675201_2 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 332.0
CMS3_k127_4675201_3 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000000002126 196.0
CMS3_k127_4675201_4 fimbrial assembly K02461 - - 0.00000000000000000000000000000000000000000001331 177.0
CMS3_k127_4675201_5 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000004892 162.0
CMS3_k127_4675201_7 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.00000000005404 76.0
CMS3_k127_4675201_8 Sporulation related domain - - - 0.0000000008966 61.0
CMS3_k127_4675201_9 - K02463 - - 0.000001867 59.0
CMS3_k127_4716510_0 Electron transfer flavoprotein K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 485.0
CMS3_k127_4716510_1 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 366.0
CMS3_k127_4716510_2 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
CMS3_k127_4716510_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003344 268.0
CMS3_k127_4716510_4 Cold shock protein domain K03704 - - 0.00000000000000000000000000002254 119.0
CMS3_k127_4716510_5 acetyltransferase K03824 - - 0.0000000000008812 69.0
CMS3_k127_4716510_6 Hypoxia induced protein conserved region - - - 0.00000000001811 66.0
CMS3_k127_4722206_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1015.0
CMS3_k127_4722206_1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 1.003e-295 930.0
CMS3_k127_4722206_10 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 584.0
CMS3_k127_4722206_11 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 572.0
CMS3_k127_4722206_12 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 547.0
CMS3_k127_4722206_13 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 538.0
CMS3_k127_4722206_14 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 531.0
CMS3_k127_4722206_15 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 521.0
CMS3_k127_4722206_16 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 516.0
CMS3_k127_4722206_17 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 485.0
CMS3_k127_4722206_18 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 482.0
CMS3_k127_4722206_19 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 478.0
CMS3_k127_4722206_2 Cytochrome C and Quinol oxidase polypeptide I K00404 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 2.154e-277 862.0
CMS3_k127_4722206_20 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 471.0
CMS3_k127_4722206_21 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 475.0
CMS3_k127_4722206_22 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 443.0
CMS3_k127_4722206_23 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 411.0
CMS3_k127_4722206_24 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 420.0
CMS3_k127_4722206_25 Bifunctional protein argC, mitochondrial-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 393.0
CMS3_k127_4722206_26 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 402.0
CMS3_k127_4722206_27 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 375.0
CMS3_k127_4722206_28 transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 392.0
CMS3_k127_4722206_29 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 374.0
CMS3_k127_4722206_3 COG2217 Cation transport ATPase K01533 - 3.6.3.4 3.425e-244 785.0
CMS3_k127_4722206_30 RNA polymerase sigma factor K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 365.0
CMS3_k127_4722206_31 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 366.0
CMS3_k127_4722206_32 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 358.0
CMS3_k127_4722206_33 effector of murein hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 344.0
CMS3_k127_4722206_34 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 347.0
CMS3_k127_4722206_35 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 317.0
CMS3_k127_4722206_36 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 309.0
CMS3_k127_4722206_37 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 291.0
CMS3_k127_4722206_38 Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 288.0
CMS3_k127_4722206_39 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000578 279.0
CMS3_k127_4722206_4 Acyl-CoA dehydrogenase, N-terminal domain K00252 - 1.3.8.6 1.855e-224 699.0
CMS3_k127_4722206_40 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000014 278.0
CMS3_k127_4722206_41 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001608 268.0
CMS3_k127_4722206_42 COG0524 Sugar kinases, ribokinase family K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005799 274.0
CMS3_k127_4722206_43 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000007725 259.0
CMS3_k127_4722206_44 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001024 253.0
CMS3_k127_4722206_45 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001354 250.0
CMS3_k127_4722206_46 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002182 249.0
CMS3_k127_4722206_47 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005189 243.0
CMS3_k127_4722206_48 transduction histidine kinase K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000003906 249.0
CMS3_k127_4722206_49 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000002244 226.0
CMS3_k127_4722206_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.052e-221 696.0
CMS3_k127_4722206_50 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000568 228.0
CMS3_k127_4722206_51 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000000000000000000001135 226.0
CMS3_k127_4722206_52 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001306 222.0
CMS3_k127_4722206_53 MafB19-like deaminase K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000002298 213.0
CMS3_k127_4722206_54 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000001375 195.0
CMS3_k127_4722206_55 KDPG and KHG aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000006339 206.0
CMS3_k127_4722206_56 Cell Wall Hydrolase - - - 0.0000000000000000000000000000000000000000000000000001291 194.0
CMS3_k127_4722206_57 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000002058 198.0
CMS3_k127_4722206_58 ROS/MUCR transcriptional regulator protein - - - 0.0000000000000000000000000000000000000000000000000003673 188.0
CMS3_k127_4722206_59 Ubiquinol-cytochrome C chaperone K17662 - - 0.0000000000000000000000000000000000000000000000001458 183.0
CMS3_k127_4722206_6 single-stranded-DNA-specific exonuclease recJ K07462 - - 5.522e-214 681.0
CMS3_k127_4722206_60 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000003683 181.0
CMS3_k127_4722206_61 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000004543 175.0
CMS3_k127_4722206_62 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000003084 163.0
CMS3_k127_4722206_63 OmpA family - - - 0.0000000000000000000000000000000000000000000794 171.0
CMS3_k127_4722206_64 Protein of unknown function (DUF1491) - - - 0.0000000000000000000000000000000000000000002612 162.0
CMS3_k127_4722206_65 - - - - 0.0000000000000000000000000000000000000001254 153.0
CMS3_k127_4722206_66 transcriptional regulator, MerR - - - 0.0000000000000000000000000000000000000003565 152.0
CMS3_k127_4722206_67 effector of murein hydrolase LrgA K06518 - - 0.00000000000000000000000000000000000002962 146.0
CMS3_k127_4722206_68 Small protein A (tmRNA-binding) - - - 0.00000000000000000000000000000000000003308 149.0
CMS3_k127_4722206_69 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000000000636 141.0
CMS3_k127_4722206_7 COG2873 O-acetylhomoserine sulfhydrylase K01738,K01740 - 2.5.1.47,2.5.1.49 2.279e-204 654.0
CMS3_k127_4722206_70 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.000000000000000000000000000000001185 140.0
CMS3_k127_4722206_71 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000003266 131.0
CMS3_k127_4722206_72 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000008116 122.0
CMS3_k127_4722206_73 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000009824 113.0
CMS3_k127_4722206_74 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000005856 102.0
CMS3_k127_4722206_75 PFAM FixH family protein - - - 0.0000000000000000000000219 106.0
CMS3_k127_4722206_76 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000004505 97.0
CMS3_k127_4722206_77 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.000000000000000008376 83.0
CMS3_k127_4722206_79 cytochrome oxidase maturation protein - - - 0.000000000001774 81.0
CMS3_k127_4722206_8 Aminotransferase K14261 GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 1.261e-203 642.0
CMS3_k127_4722206_80 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.0000000004647 70.0
CMS3_k127_4722206_83 Cytochrome c - - - 0.000005833 55.0
CMS3_k127_4722206_84 - - - - 0.000008518 51.0
CMS3_k127_4722206_9 IG-like fold at C-terminal of FixG, putative oxidoreductase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 8.575e-195 619.0
CMS3_k127_4738324_0 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 337.0
CMS3_k127_4738324_1 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000002647 183.0
CMS3_k127_4738324_2 GntR family - - - 0.0000000000000005139 83.0
CMS3_k127_4738324_3 synthetase - - - 0.00000005426 58.0
CMS3_k127_4781335_0 Heat shock 70 kDa protein K04043 - - 1.798e-291 899.0
CMS3_k127_4781335_1 Domain of unknown function (DUF1848) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 384.0
CMS3_k127_4781335_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000008366 124.0
CMS3_k127_4830862_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1086.0
CMS3_k127_4830862_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 5.132e-274 860.0
CMS3_k127_4830862_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006581 247.0
CMS3_k127_4830862_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000000000000000000000007832 244.0
CMS3_k127_4830862_12 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000002524 213.0
CMS3_k127_4830862_13 Cell wall hydrolyses involved in spore germination - - - 0.000000000000000000000000000000000000000000000000000007063 199.0
CMS3_k127_4830862_14 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000000000002611 183.0
CMS3_k127_4830862_15 DinB family - - - 0.000000000000000000000000000000000003673 154.0
CMS3_k127_4830862_16 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000001822 118.0
CMS3_k127_4830862_17 - - - - 0.00000000000009752 75.0
CMS3_k127_4830862_18 COG3240 Phospholipase lecithinase hemolysin K12686 - - 0.0006577 50.0
CMS3_k127_4830862_2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 492.0
CMS3_k127_4830862_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 456.0
CMS3_k127_4830862_4 PEP-CTERM system TPR-repeat lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 471.0
CMS3_k127_4830862_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 436.0
CMS3_k127_4830862_6 lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000598 348.0
CMS3_k127_4830862_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 334.0
CMS3_k127_4830862_8 COG0530 Ca2 Na antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003127 285.0
CMS3_k127_4830862_9 PFAM NLP P60 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001368 270.0
CMS3_k127_4886504_0 alpha/beta hydrolase fold K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 293.0
CMS3_k127_4886504_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000005272 153.0
CMS3_k127_4886504_2 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000636 141.0
CMS3_k127_4897554_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1253.0
CMS3_k127_4897554_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.04e-322 1000.0
CMS3_k127_4897554_10 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 387.0
CMS3_k127_4897554_11 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 370.0
CMS3_k127_4897554_12 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 367.0
CMS3_k127_4897554_13 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007742 346.0
CMS3_k127_4897554_14 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 302.0
CMS3_k127_4897554_15 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 297.0
CMS3_k127_4897554_16 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K13039 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005712 276.0
CMS3_k127_4897554_17 Sulfopyruvate decarboxylase subunit alpha K06034 - 4.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000008763 252.0
CMS3_k127_4897554_18 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003357 244.0
CMS3_k127_4897554_19 Protein of unknown function (DUF1194) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002151 238.0
CMS3_k127_4897554_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 3.425e-215 692.0
CMS3_k127_4897554_20 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000000000000000000001404 235.0
CMS3_k127_4897554_21 Lysine transporter LysE - - - 0.00000000000000000000000000000000000000000000000000000000000003709 226.0
CMS3_k127_4897554_22 - - - - 0.000000000000000000000000000000000000000000000000000000000001342 224.0
CMS3_k127_4897554_23 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000002194 186.0
CMS3_k127_4897554_24 Flp pilus assembly protein TadG - - - 0.0000000000000000000000000000000000000000000000000003465 202.0
CMS3_k127_4897554_25 - - - - 0.000000000000000000000000000000000000000000001719 173.0
CMS3_k127_4897554_26 - - - - 0.00000000000000000000000001185 111.0
CMS3_k127_4897554_27 Phasin protein - - - 0.000000000000000000007572 99.0
CMS3_k127_4897554_29 - - - - 0.0000007989 58.0
CMS3_k127_4897554_3 Q COG1233 Phytoene dehydrogenase and related proteins - - - 5.838e-206 653.0
CMS3_k127_4897554_30 - - - - 0.0000293 53.0
CMS3_k127_4897554_4 phosphomannomutase K01840 - 5.4.2.8 5.414e-194 616.0
CMS3_k127_4897554_5 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 608.0
CMS3_k127_4897554_6 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 507.0
CMS3_k127_4897554_7 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 454.0
CMS3_k127_4897554_8 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 428.0
CMS3_k127_4897554_9 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 434.0
CMS3_k127_4914084_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.393e-244 766.0
CMS3_k127_4914084_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 9.746e-210 661.0
CMS3_k127_4914084_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 413.0
CMS3_k127_4914084_3 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 381.0
CMS3_k127_4914084_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000002313 271.0
CMS3_k127_4914084_5 FR47-like protein - - - 0.00000000000000000000000000000000000000000000008811 174.0
CMS3_k127_4914084_6 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0001485 45.0
CMS3_k127_4960627_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1540.0
CMS3_k127_4960627_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1315.0
CMS3_k127_4960627_10 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 325.0
CMS3_k127_4960627_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 316.0
CMS3_k127_4960627_12 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 298.0
CMS3_k127_4960627_13 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003732 241.0
CMS3_k127_4960627_14 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000008757 228.0
CMS3_k127_4960627_15 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000007184 229.0
CMS3_k127_4960627_16 FlgJ-related protein K03796 - - 0.00000000000000000000000000000000000000000000000000000005034 208.0
CMS3_k127_4960627_17 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K16168 - - 0.00000000000000000000000000000000000000000000000000002833 204.0
CMS3_k127_4960627_18 Cytochrome c - - - 0.00000000000000000000000000000000114 138.0
CMS3_k127_4960627_19 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000001367 92.0
CMS3_k127_4960627_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 3.198e-246 773.0
CMS3_k127_4960627_20 Cytochrome c - - - 0.000000000000000000293 92.0
CMS3_k127_4960627_21 Protein of unknown function (DUF1684) K09164 - - 0.00000000007685 65.0
CMS3_k127_4960627_22 - - - - 0.000000000417 65.0
CMS3_k127_4960627_23 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000004309 64.0
CMS3_k127_4960627_3 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 1.604e-223 701.0
CMS3_k127_4960627_4 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 516.0
CMS3_k127_4960627_5 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 511.0
CMS3_k127_4960627_6 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 396.0
CMS3_k127_4960627_7 Chalcone and stilbene synthases, C-terminal domain K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 395.0
CMS3_k127_4960627_8 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 385.0
CMS3_k127_4960627_9 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 375.0
CMS3_k127_5034355_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 379.0
CMS3_k127_5034355_1 COG1587 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000009313 217.0
CMS3_k127_5034355_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000002908 183.0
CMS3_k127_5044620_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1240.0
CMS3_k127_5044620_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 4.282e-300 934.0
CMS3_k127_5044620_2 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 579.0
CMS3_k127_5044620_3 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004826 268.0
CMS3_k127_5044620_4 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000009039 224.0
CMS3_k127_5044620_5 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000000000001771 101.0
CMS3_k127_5044620_6 - - - - 0.00000000000002332 83.0
CMS3_k127_5116648_0 PQQ-like domain K00114 - 1.1.2.8 9.128e-313 966.0
CMS3_k127_5116648_1 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.656e-253 793.0
CMS3_k127_5116648_10 Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000000000000001132 164.0
CMS3_k127_5116648_11 Domain of unknown function (DUF4345) - - - 0.000000000000000000000000000000000000001051 151.0
CMS3_k127_5116648_12 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000004429 145.0
CMS3_k127_5116648_13 - - - - 0.000000000000000000000000000000000000721 141.0
CMS3_k127_5116648_14 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000005499 136.0
CMS3_k127_5116648_15 - - - - 0.0000000000000000000000000000006858 134.0
CMS3_k127_5116648_16 - - - - 0.000000000000000000001055 100.0
CMS3_k127_5116648_17 Protein of unknown function (DUF447) K09154 - - 0.0000000003287 68.0
CMS3_k127_5116648_2 PFAM dihydropteroate synthase, DHPS K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 567.0
CMS3_k127_5116648_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 358.0
CMS3_k127_5116648_4 Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 320.0
CMS3_k127_5116648_5 Sulphur oxidation protein SoxZ K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000104 283.0
CMS3_k127_5116648_6 Flavoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000755 267.0
CMS3_k127_5116648_7 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000000000141 222.0
CMS3_k127_5116648_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000001927 186.0
CMS3_k127_5116648_9 aspartate glutamate uridylate kinase - - - 0.0000000000000000000000000000000000000000000006134 173.0
CMS3_k127_514391_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 551.0
CMS3_k127_514391_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 367.0
CMS3_k127_514391_2 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 370.0
CMS3_k127_514391_3 Metal binding domain of Ada K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 289.0
CMS3_k127_514391_4 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 294.0
CMS3_k127_514391_5 Dodecin K09165 - - 0.0000000000000000000000002636 106.0
CMS3_k127_521957_0 DNA polymerase K02337 - 2.7.7.7 0.0 1513.0
CMS3_k127_521957_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.546e-304 949.0
CMS3_k127_521957_10 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 497.0
CMS3_k127_521957_11 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 493.0
CMS3_k127_521957_12 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 443.0
CMS3_k127_521957_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 411.0
CMS3_k127_521957_14 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 404.0
CMS3_k127_521957_15 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 409.0
CMS3_k127_521957_16 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 377.0
CMS3_k127_521957_17 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 358.0
CMS3_k127_521957_18 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 338.0
CMS3_k127_521957_19 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000629 330.0
CMS3_k127_521957_2 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 9.24e-287 889.0
CMS3_k127_521957_20 Protein conserved in bacteria K09949 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 316.0
CMS3_k127_521957_21 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 310.0
CMS3_k127_521957_22 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 298.0
CMS3_k127_521957_23 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008908 261.0
CMS3_k127_521957_24 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001772 250.0
CMS3_k127_521957_25 homocysteine K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000002408 254.0
CMS3_k127_521957_26 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000002508 239.0
CMS3_k127_521957_27 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000001683 229.0
CMS3_k127_521957_28 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000146 212.0
CMS3_k127_521957_29 cheY-homologous receiver domain K20977 - - 0.00000000000000000000000000000000000000000000001146 182.0
CMS3_k127_521957_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.358e-232 726.0
CMS3_k127_521957_30 Cupin domain - - - 0.00000000000000000000000000000000000000000004305 164.0
CMS3_k127_521957_31 COG2825 Outer membrane protein - - - 0.000000000000000000000000000521 129.0
CMS3_k127_521957_32 - - - - 0.0000000000000000000000000065 114.0
CMS3_k127_521957_33 - - - - 0.000000000000002426 83.0
CMS3_k127_521957_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.2e-226 707.0
CMS3_k127_521957_5 Competence protein K02238 - - 1.752e-217 697.0
CMS3_k127_521957_6 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.653e-213 672.0
CMS3_k127_521957_7 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 535.0
CMS3_k127_521957_8 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 519.0
CMS3_k127_521957_9 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 505.0
CMS3_k127_5295530_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.712e-228 715.0
CMS3_k127_5295530_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 557.0
CMS3_k127_5295530_10 rrna methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004572 234.0
CMS3_k127_5295530_11 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000575 213.0
CMS3_k127_5295530_12 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000004391 201.0
CMS3_k127_5295530_13 YHS domain - - - 0.000000000000000000000000000000000000000000000000000001201 195.0
CMS3_k127_5295530_14 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000007736 200.0
CMS3_k127_5295530_15 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000006849 178.0
CMS3_k127_5295530_16 invasion associated locus B - - - 0.00000000000000000000000000000000000000000000004106 182.0
CMS3_k127_5295530_17 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000003133 169.0
CMS3_k127_5295530_18 YGGT family K02221 - - 0.0000000000000000000000000000002828 126.0
CMS3_k127_5295530_19 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000001795 130.0
CMS3_k127_5295530_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 559.0
CMS3_k127_5295530_20 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000001007 101.0
CMS3_k127_5295530_21 Protein of unknown function (DUF3253) - - - 0.0000000000000000000006487 98.0
CMS3_k127_5295530_22 Protein of unknown function (DUF2924) - - - 0.00000000000000000008562 90.0
CMS3_k127_5295530_23 DUF218 domain - - - 0.000000000000000005903 91.0
CMS3_k127_5295530_24 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000006563 70.0
CMS3_k127_5295530_25 PFAM FecR protein - - - 0.000000000004283 75.0
CMS3_k127_5295530_3 COG1961 Site-specific recombinases, DNA invertase Pin homologs K06400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 565.0
CMS3_k127_5295530_4 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K21053 - 3.5.4.2,3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 463.0
CMS3_k127_5295530_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 440.0
CMS3_k127_5295530_6 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 419.0
CMS3_k127_5295530_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 411.0
CMS3_k127_5295530_8 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000173 305.0
CMS3_k127_5295530_9 NnrU protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007235 270.0
CMS3_k127_5314578_0 transport system, permease component K05778 - - 2.195e-240 756.0
CMS3_k127_5314578_1 transport system periplasmic component K05777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 533.0
CMS3_k127_5314578_10 PFAM Cupin 2 conserved barrel domain protein K21700 - - 0.00000000000000000000000000000009554 127.0
CMS3_k127_5314578_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000004123 115.0
CMS3_k127_5314578_12 CHRD domain - - - 0.000000000000000000009564 102.0
CMS3_k127_5314578_13 - - - - 0.0009726 42.0
CMS3_k127_5314578_2 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 435.0
CMS3_k127_5314578_3 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 333.0
CMS3_k127_5314578_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008193 246.0
CMS3_k127_5314578_5 redox protein regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000006712 232.0
CMS3_k127_5314578_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002676 238.0
CMS3_k127_5314578_7 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005573 215.0
CMS3_k127_5314578_8 transport system, ATPase component K05779 - - 0.0000000000000000000000000000000000000000001459 182.0
CMS3_k127_5314578_9 Usg-like family - - - 0.00000000000000000000000000000003221 128.0
CMS3_k127_5325717_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.392e-249 777.0
CMS3_k127_5325717_1 TIGRFAM death-on-curing family protein K07341 - - 0.000000000000000000000000000000000000000008703 156.0
CMS3_k127_5325717_2 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000004457 155.0
CMS3_k127_5325717_3 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.00000000000000000000000000000000000004207 158.0
CMS3_k127_5325717_4 - - - - 0.0000000000000000000001645 98.0
CMS3_k127_5325717_5 - - - - 0.000000000000004932 78.0
CMS3_k127_5422856_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 549.0
CMS3_k127_5422856_1 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 418.0
CMS3_k127_5422856_10 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000343 144.0
CMS3_k127_5422856_2 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 325.0
CMS3_k127_5422856_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001193 244.0
CMS3_k127_5422856_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000007029 234.0
CMS3_k127_5422856_5 FtsZ-dependent cytokinesis - - - 0.0000000000000000000000000000000000000000000000000000000000000005157 227.0
CMS3_k127_5422856_6 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000003377 210.0
CMS3_k127_5422856_7 - K10716 - - 0.000000000000000000000000000000000000000000000000000000004163 211.0
CMS3_k127_5422856_8 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000006059 180.0
CMS3_k127_5422856_9 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000002183 149.0
CMS3_k127_5457672_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.621e-320 987.0
CMS3_k127_5457672_1 Belongs to the 5'-nucleotidase family K17224 - - 6.75e-259 809.0
CMS3_k127_5457672_10 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 359.0
CMS3_k127_5457672_11 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 342.0
CMS3_k127_5457672_12 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 317.0
CMS3_k127_5457672_13 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001798 244.0
CMS3_k127_5457672_14 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000003907 184.0
CMS3_k127_5457672_15 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000004868 178.0
CMS3_k127_5457672_16 Haem-degrading - - - 0.0000000000000000000000000000000000000000000007654 171.0
CMS3_k127_5457672_17 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000002698 167.0
CMS3_k127_5457672_18 cytochrome c K17223 - - 0.0000000000000000000000000000000000000000008937 163.0
CMS3_k127_5457672_19 VanZ like family - - - 0.000000000000000000000000000000000000000002075 158.0
CMS3_k127_5457672_2 Belongs to the arginase family K01480,K18459 - 3.5.3.11,3.5.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 510.0
CMS3_k127_5457672_20 Sulphur oxidation protein SoxZ - - - 0.000000000000000000000000000000000000000005514 156.0
CMS3_k127_5457672_21 transcriptional regulator, ArsR family - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000001636 132.0
CMS3_k127_5457672_22 Regulatory protein SoxS - - - 0.0000000000000000000000000002217 119.0
CMS3_k127_5457672_23 cytochrome K08738 - - 0.0000000000000000000000003718 108.0
CMS3_k127_5457672_24 histidine kinase HAMP region domain protein - - - 0.00000000000001725 77.0
CMS3_k127_5457672_3 spermidine synthase activity K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 490.0
CMS3_k127_5457672_4 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218,K17229 - 1.8.2.3,1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 472.0
CMS3_k127_5457672_5 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 455.0
CMS3_k127_5457672_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 368.0
CMS3_k127_5457672_7 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 364.0
CMS3_k127_5457672_8 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 368.0
CMS3_k127_5457672_9 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 364.0
CMS3_k127_5505597_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1134.0
CMS3_k127_5505597_1 COG3970 Fumarylacetoacetate (FAA) hydrolase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 505.0
CMS3_k127_5505597_10 Poly-beta-hydroxybutyrate polymerase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000004143 222.0
CMS3_k127_5505597_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 327.0
CMS3_k127_5505597_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 306.0
CMS3_k127_5505597_4 Enoyl-(Acyl carrier protein) reductase K18335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 313.0
CMS3_k127_5505597_5 Proline racemase K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 288.0
CMS3_k127_5505597_6 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 289.0
CMS3_k127_5505597_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006 287.0
CMS3_k127_5505597_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002305 284.0
CMS3_k127_5505597_9 Belongs to the proline racemase family K01777 - 5.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000512 268.0
CMS3_k127_5516255_0 PQQ-like domain - - - 2.036e-286 893.0
CMS3_k127_5516255_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.304e-279 880.0
CMS3_k127_5516255_10 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 542.0
CMS3_k127_5516255_11 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 539.0
CMS3_k127_5516255_12 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K03430 - 2.6.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 534.0
CMS3_k127_5516255_13 Binding-protein-dependent transport system inner membrane component K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 526.0
CMS3_k127_5516255_14 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 486.0
CMS3_k127_5516255_15 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 490.0
CMS3_k127_5516255_16 Oligopeptide/dipeptide transporter, C-terminal region K02032,K12372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 454.0
CMS3_k127_5516255_17 Fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 454.0
CMS3_k127_5516255_18 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF K12371 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0015232,GO:0015886,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 456.0
CMS3_k127_5516255_19 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 448.0
CMS3_k127_5516255_2 Bacterial extracellular solute-binding proteins, family 5 Middle K12368 - - 1.394e-273 850.0
CMS3_k127_5516255_20 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 432.0
CMS3_k127_5516255_21 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 416.0
CMS3_k127_5516255_22 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 394.0
CMS3_k127_5516255_23 LysR substrate binding domain K02623 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 390.0
CMS3_k127_5516255_24 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 396.0
CMS3_k127_5516255_25 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 384.0
CMS3_k127_5516255_26 Ndr family K01055,K14727 - 3.1.1.24,4.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 358.0
CMS3_k127_5516255_27 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 362.0
CMS3_k127_5516255_28 transcriptional regulator K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 349.0
CMS3_k127_5516255_29 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 335.0
CMS3_k127_5516255_3 ABC-type Fe3 transport system permease component K02011 - - 1.646e-269 846.0
CMS3_k127_5516255_30 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 313.0
CMS3_k127_5516255_31 protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001716 279.0
CMS3_k127_5516255_32 BNR repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002352 281.0
CMS3_k127_5516255_33 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001744 245.0
CMS3_k127_5516255_34 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000005597 229.0
CMS3_k127_5516255_35 Ankyrin repeats (3 copies) K06867,K21440 - - 0.00000000000000000000000000000000000000000000000000000000000001209 226.0
CMS3_k127_5516255_36 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000009982 217.0
CMS3_k127_5516255_37 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000003183 190.0
CMS3_k127_5516255_38 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000004759 185.0
CMS3_k127_5516255_4 Aminotransferase class-III K00823 - 2.6.1.19 1.36e-199 631.0
CMS3_k127_5516255_40 cytochrome - - - 0.0000000000000000000000000000000000000005864 155.0
CMS3_k127_5516255_41 - - - - 0.0000000000000000000000000000000000001679 153.0
CMS3_k127_5516255_42 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000004487 128.0
CMS3_k127_5516255_43 3-methylitaconate isomerase K09788 - - 0.000000000000000000000000000001074 125.0
CMS3_k127_5516255_44 - - - - 0.000000000000000000000000000004311 130.0
CMS3_k127_5516255_45 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K02075,K09816 - - 0.00000000000000000000000003261 110.0
CMS3_k127_5516255_46 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000001483 81.0
CMS3_k127_5516255_47 COG2010 Cytochrome c, mono- and diheme variants K00406 - - 0.000004855 57.0
CMS3_k127_5516255_48 Staphylococcal nuclease homologue - - - 0.000008002 56.0
CMS3_k127_5516255_49 Protein of unknown function (DUF3800) - - - 0.000103 53.0
CMS3_k127_5516255_5 Na phosphate symporter K03324 - - 4.157e-199 636.0
CMS3_k127_5516255_6 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 4.287e-196 617.0
CMS3_k127_5516255_7 Patatin-like phospholipase - - - 1.487e-194 624.0
CMS3_k127_5516255_8 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.483e-194 613.0
CMS3_k127_5516255_9 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 574.0
CMS3_k127_5540202_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1060.0
CMS3_k127_5540202_1 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 0.0 1047.0
CMS3_k127_5540202_10 carbohydrate transport K02027 - - 2.322e-203 640.0
CMS3_k127_5540202_11 4Fe-4S single cluster domain - - - 3.963e-202 635.0
CMS3_k127_5540202_12 thymidine phosphorylase K00758 - 2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 601.0
CMS3_k127_5540202_13 Cytochrome D1 heme domain K19345 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 569.0
CMS3_k127_5540202_14 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 569.0
CMS3_k127_5540202_15 Glycosyl Hydrolase Family 88 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 563.0
CMS3_k127_5540202_16 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 547.0
CMS3_k127_5540202_17 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 539.0
CMS3_k127_5540202_18 Mandelate Racemase Muconate Lactonizing K01781,K20023,K20549 - 4.2.1.156,4.2.1.42,5.1.2.2,5.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 533.0
CMS3_k127_5540202_19 sulfate assimilation K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 532.0
CMS3_k127_5540202_2 Proton-conducting membrane transporter - - - 2.995e-320 993.0
CMS3_k127_5540202_20 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 516.0
CMS3_k127_5540202_21 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 521.0
CMS3_k127_5540202_22 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 478.0
CMS3_k127_5540202_23 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 475.0
CMS3_k127_5540202_24 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 479.0
CMS3_k127_5540202_25 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009029 470.0
CMS3_k127_5540202_26 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 478.0
CMS3_k127_5540202_27 Binding-protein-dependent transport system inner membrane component K10229 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 469.0
CMS3_k127_5540202_28 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 455.0
CMS3_k127_5540202_29 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 464.0
CMS3_k127_5540202_3 nitrite reductase K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 1.089e-303 940.0
CMS3_k127_5540202_30 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 460.0
CMS3_k127_5540202_31 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 390.0
CMS3_k127_5540202_32 GDP-mannose 4,6 dehydratase K18981 - 1.1.1.203 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 373.0
CMS3_k127_5540202_33 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 375.0
CMS3_k127_5540202_34 KR domain K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 371.0
CMS3_k127_5540202_35 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 361.0
CMS3_k127_5540202_36 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 350.0
CMS3_k127_5540202_37 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 338.0
CMS3_k127_5540202_38 helix_turn _helix lactose operon repressor K02529,K06145 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 338.0
CMS3_k127_5540202_39 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 331.0
CMS3_k127_5540202_4 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 7.491e-262 818.0
CMS3_k127_5540202_40 overlaps another CDS with the same product name - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 329.0
CMS3_k127_5540202_41 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 335.0
CMS3_k127_5540202_42 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 326.0
CMS3_k127_5540202_43 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 323.0
CMS3_k127_5540202_44 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 312.0
CMS3_k127_5540202_45 Enoyl-(Acyl carrier protein) reductase K00019,K18335 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 313.0
CMS3_k127_5540202_46 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 308.0
CMS3_k127_5540202_47 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 304.0
CMS3_k127_5540202_48 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 304.0
CMS3_k127_5540202_49 NnrS protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 309.0
CMS3_k127_5540202_5 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 6.507e-257 801.0
CMS3_k127_5540202_50 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 300.0
CMS3_k127_5540202_51 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 299.0
CMS3_k127_5540202_52 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001314 287.0
CMS3_k127_5540202_53 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001017 263.0
CMS3_k127_5540202_54 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000154 259.0
CMS3_k127_5540202_55 Cytochrome D1 heme domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002148 252.0
CMS3_k127_5540202_56 cytochrome c oxidase (Subunit II) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 251.0
CMS3_k127_5540202_57 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001306 255.0
CMS3_k127_5540202_58 With different specificities (related to short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002037 250.0
CMS3_k127_5540202_59 reductase, beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000002971 237.0
CMS3_k127_5540202_6 NADH-ubiquinone oxidoreductase chain 49kDa - - - 9.14e-253 786.0
CMS3_k127_5540202_60 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000925 237.0
CMS3_k127_5540202_61 transcriptional regulator AsnC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000009497 243.0
CMS3_k127_5540202_62 Domain of unknown function (DUF4202) - - - 0.00000000000000000000000000000000000000000000000000000000000001238 222.0
CMS3_k127_5540202_63 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000003628 223.0
CMS3_k127_5540202_64 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000001386 206.0
CMS3_k127_5540202_65 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000000000000000003115 199.0
CMS3_k127_5540202_66 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000000000006876 210.0
CMS3_k127_5540202_67 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000001143 192.0
CMS3_k127_5540202_68 PFAM NADP oxidoreductase coenzyme F420-dependent K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000003707 185.0
CMS3_k127_5540202_69 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000006646 183.0
CMS3_k127_5540202_7 NADH:flavin oxidoreductase / NADH oxidase family - - - 1.952e-215 683.0
CMS3_k127_5540202_70 Cupin - - - 0.0000000000000000000000000000000000000000000006809 174.0
CMS3_k127_5540202_71 Cupin domain - - - 0.0000000000000000000000000000000000000000001855 165.0
CMS3_k127_5540202_72 Transcriptional regulator (ArsR family protein) K03892 - - 0.000000000000000000000000000000000000000003835 156.0
CMS3_k127_5540202_73 Cytochrome C biogenesis protein CcdA K13876 - 4.2.1.43 0.000000000000000000000000000000000000000004278 157.0
CMS3_k127_5540202_74 DoxX - - - 0.0000000000000000000000000000000000000002211 155.0
CMS3_k127_5540202_75 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000003858 156.0
CMS3_k127_5540202_76 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000006391 149.0
CMS3_k127_5540202_77 pathogenesis - - - 0.00000000000000000000000000000000003368 145.0
CMS3_k127_5540202_78 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000007638 133.0
CMS3_k127_5540202_79 - - - - 0.0000000000000000000000000000001104 133.0
CMS3_k127_5540202_8 FMN_bind K19339,K19343 - - 3.684e-214 685.0
CMS3_k127_5540202_80 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000001288 123.0
CMS3_k127_5540202_81 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000191 125.0
CMS3_k127_5540202_82 Cytochrome C oxidase, cbb3-type, subunit III K19344 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000003794 118.0
CMS3_k127_5540202_83 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000000000000003246 110.0
CMS3_k127_5540202_84 - - - - 0.000000000000000000000007145 106.0
CMS3_k127_5540202_85 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000001913 111.0
CMS3_k127_5540202_87 oxygen carrier activity K07216 - - 0.00000000000000000000006533 109.0
CMS3_k127_5540202_88 methylglyoxal synthase K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.0000000000000000000000756 103.0
CMS3_k127_5540202_89 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000004689 109.0
CMS3_k127_5540202_9 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 2.181e-203 641.0
CMS3_k127_5540202_90 Glycosyl transferases group 1 - - - 0.000000000000000006327 96.0
CMS3_k127_5540202_91 Nitrate reductase delta subunit - - - 0.000000000000000831 87.0
CMS3_k127_5540202_92 - - - - 0.0000000000001759 73.0
CMS3_k127_5540202_93 - - - - 0.0000000001983 65.0
CMS3_k127_5540202_94 PFAM Resolvase domain - - - 0.000000001106 64.0
CMS3_k127_5540202_95 Rhodanese-related sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000006032 54.0
CMS3_k127_5540202_96 Transposase and inactivated derivatives K07486 - - 0.0001727 48.0
CMS3_k127_5540202_97 SMP-30 Gluconolaconase - - - 0.0005679 45.0
CMS3_k127_5637101_0 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 518.0
CMS3_k127_5637101_1 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 492.0
CMS3_k127_5637101_10 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000001437 150.0
CMS3_k127_5637101_11 - - - - 0.0000000000000000000002033 100.0
CMS3_k127_5637101_2 Binding-protein-dependent transport system inner membrane component K02029,K09971,K10002,K10037 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 487.0
CMS3_k127_5637101_3 Binding-protein-dependent transport system inner membrane component K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 474.0
CMS3_k127_5637101_4 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 459.0
CMS3_k127_5637101_5 ABC-type polar amino acid transport system ATPase component K02028,K09972 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 444.0
CMS3_k127_5637101_6 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 309.0
CMS3_k127_5637101_7 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007805 306.0
CMS3_k127_5637101_8 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000002252 233.0
CMS3_k127_5637101_9 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000005636 197.0
CMS3_k127_5648053_0 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 408.0
CMS3_k127_5648053_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 347.0
CMS3_k127_5648053_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004661 258.0
CMS3_k127_5648053_3 Lytic murein transglycosylase K08305 - - 0.000005188 57.0
CMS3_k127_5657709_0 membrane protein, required for spore maturation in B.subtilis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 581.0
CMS3_k127_5657709_1 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000478 484.0
CMS3_k127_5657709_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 412.0
CMS3_k127_5657709_3 thiamine-containing compound biosynthetic process K02051,K15553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 370.0
CMS3_k127_5657709_4 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050,K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 310.0
CMS3_k127_5657709_5 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000161 273.0
CMS3_k127_5657709_6 transcriptional regulator K02624 - - 0.000000000000000000000000000000000000000000000000000000000000000003631 235.0
CMS3_k127_5657709_7 Protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000000000000000002415 184.0
CMS3_k127_5657709_8 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000001637 105.0
CMS3_k127_5691262_0 Sodium/hydrogen exchanger family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 418.0
CMS3_k127_5691262_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000001518 204.0
CMS3_k127_5691262_2 Cytidine and deoxycytidylate deaminase zinc-binding region K01485 - 3.5.4.1 0.0000000000000000000000000000002212 130.0
CMS3_k127_5691262_3 Tetratricopeptide repeat - - - 0.0000004717 58.0
CMS3_k127_5692140_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 532.0
CMS3_k127_5692140_1 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 335.0
CMS3_k127_5692140_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007083 246.0
CMS3_k127_5692140_3 - - - - 0.000000000000000000000000000000000000000000000001074 177.0
CMS3_k127_5730186_0 Histidine kinase - - - 0.0 1123.0
CMS3_k127_5730186_1 DNA helicase K03657 - 3.6.4.12 0.0 1026.0
CMS3_k127_5730186_10 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 369.0
CMS3_k127_5730186_11 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 321.0
CMS3_k127_5730186_12 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 302.0
CMS3_k127_5730186_13 Sodium Bile acid symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002688 284.0
CMS3_k127_5730186_14 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001844 259.0
CMS3_k127_5730186_15 Pfam:DUF955 K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004775 241.0
CMS3_k127_5730186_16 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000139 268.0
CMS3_k127_5730186_17 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000007231 250.0
CMS3_k127_5730186_18 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001065 232.0
CMS3_k127_5730186_19 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.000000000000000000000000000000000000000000000000000000000001011 216.0
CMS3_k127_5730186_2 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 6.246e-288 891.0
CMS3_k127_5730186_20 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000008055 201.0
CMS3_k127_5730186_21 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000004591 194.0
CMS3_k127_5730186_22 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000002018 186.0
CMS3_k127_5730186_23 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000002191 186.0
CMS3_k127_5730186_24 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000001883 182.0
CMS3_k127_5730186_25 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000004763 123.0
CMS3_k127_5730186_27 - - - - 0.000000000001761 79.0
CMS3_k127_5730186_29 - - - - 0.00000001413 64.0
CMS3_k127_5730186_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.108e-274 868.0
CMS3_k127_5730186_4 SMART Elongator protein 3 MiaB NifB - - - 3.968e-249 784.0
CMS3_k127_5730186_5 aminopeptidase K01262 - 3.4.11.9 3.903e-246 774.0
CMS3_k127_5730186_6 Voltage gated chloride channel K03281 - - 1.766e-222 706.0
CMS3_k127_5730186_7 PAS PAC sensor protein K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 619.0
CMS3_k127_5730186_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 458.0
CMS3_k127_5730186_9 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 437.0
CMS3_k127_5737344_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 1.134e-196 621.0
CMS3_k127_5737344_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 460.0
CMS3_k127_5737344_10 NADH ubiquinone oxidoreductase 17.2 kD subunit - - - 0.000000000000000000000000000000000000000000000000001681 184.0
CMS3_k127_5737344_11 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000003469 185.0
CMS3_k127_5737344_12 - - - - 0.00000000000000000000000000000000000000000000000295 181.0
CMS3_k127_5737344_13 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000001055 154.0
CMS3_k127_5737344_14 protein conserved in bacteria - - - 0.000000000000000000000000000000001131 144.0
CMS3_k127_5737344_15 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000003929 131.0
CMS3_k127_5737344_16 Cupin domain - - - 0.00000000000000000000000000007657 118.0
CMS3_k127_5737344_2 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 418.0
CMS3_k127_5737344_3 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 364.0
CMS3_k127_5737344_4 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 324.0
CMS3_k127_5737344_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 306.0
CMS3_k127_5737344_6 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000228 277.0
CMS3_k127_5737344_7 transcriptional regulator K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000007666 228.0
CMS3_k127_5737344_8 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000000000000000000000000000000002701 229.0
CMS3_k127_5737344_9 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000001189 187.0
CMS3_k127_5759869_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 1.834e-270 859.0
CMS3_k127_5759869_1 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 5.443e-270 848.0
CMS3_k127_5759869_10 GDP-mannose 4,6 dehydratase K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 584.0
CMS3_k127_5759869_11 Domain of unknown function (DUF3463) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 565.0
CMS3_k127_5759869_12 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 544.0
CMS3_k127_5759869_13 Cys/Met metabolism PLP-dependent enzyme K00652,K00654 - 2.3.1.47,2.3.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 535.0
CMS3_k127_5759869_14 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 518.0
CMS3_k127_5759869_15 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 539.0
CMS3_k127_5759869_16 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K13252 - 2.1.3.3,2.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 511.0
CMS3_k127_5759869_17 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 503.0
CMS3_k127_5759869_18 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 508.0
CMS3_k127_5759869_19 PFAM Glycosyl transferases group 1 K12995 - 2.4.1.348 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 494.0
CMS3_k127_5759869_2 AMP-binding enzyme C-terminal domain K00666 - - 1.067e-254 796.0
CMS3_k127_5759869_20 Dehydrogenase E1 component K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 474.0
CMS3_k127_5759869_21 Bacterial regulatory protein, Fis family K10912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009854 463.0
CMS3_k127_5759869_22 2-oxoacid dehydrogenases acyltransferase (catalytic domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 458.0
CMS3_k127_5759869_23 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377,K16554 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 449.0
CMS3_k127_5759869_24 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 462.0
CMS3_k127_5759869_25 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 445.0
CMS3_k127_5759869_26 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 448.0
CMS3_k127_5759869_27 3-beta hydroxysteroid dehydrogenase/isomerase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 429.0
CMS3_k127_5759869_28 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 431.0
CMS3_k127_5759869_29 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 423.0
CMS3_k127_5759869_3 DNA polymerase X family K02347 - - 5.393e-231 728.0
CMS3_k127_5759869_30 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 419.0
CMS3_k127_5759869_31 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 412.0
CMS3_k127_5759869_32 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 411.0
CMS3_k127_5759869_33 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 410.0
CMS3_k127_5759869_34 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 408.0
CMS3_k127_5759869_35 Reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 399.0
CMS3_k127_5759869_36 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 396.0
CMS3_k127_5759869_37 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 388.0
CMS3_k127_5759869_38 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 383.0
CMS3_k127_5759869_39 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 365.0
CMS3_k127_5759869_4 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 1.303e-220 692.0
CMS3_k127_5759869_40 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 356.0
CMS3_k127_5759869_41 phosphatase activity K07025,K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 351.0
CMS3_k127_5759869_42 RNA polymerase sigma factor K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 344.0
CMS3_k127_5759869_43 PFAM Glycosyl transferases group 1 K16703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 349.0
CMS3_k127_5759869_44 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 331.0
CMS3_k127_5759869_45 de-polymerase K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 325.0
CMS3_k127_5759869_46 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 315.0
CMS3_k127_5759869_47 haemagglutination activity domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 343.0
CMS3_k127_5759869_48 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 312.0
CMS3_k127_5759869_49 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 308.0
CMS3_k127_5759869_5 FAD dependent oxidoreductase - - - 6.627e-215 675.0
CMS3_k127_5759869_50 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 312.0
CMS3_k127_5759869_51 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 308.0
CMS3_k127_5759869_52 Phytanoyl-CoA dioxygenase (PhyH) K21195 - 1.14.11.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 299.0
CMS3_k127_5759869_53 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 303.0
CMS3_k127_5759869_54 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 317.0
CMS3_k127_5759869_55 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009223 279.0
CMS3_k127_5759869_56 Metal dependent phosphohydrolases with conserved 'HD' motif. K06952 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003743 256.0
CMS3_k127_5759869_57 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001095 264.0
CMS3_k127_5759869_58 Phytoene synthase K21678 - 2.5.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000654 259.0
CMS3_k127_5759869_59 lipid kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000502 257.0
CMS3_k127_5759869_6 Heparinase II/III N-terminus - - - 1.906e-212 680.0
CMS3_k127_5759869_60 BON domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003626 251.0
CMS3_k127_5759869_61 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004181 253.0
CMS3_k127_5759869_62 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004429 246.0
CMS3_k127_5759869_63 PFAM filamentation induced by cAMP protein Fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007496 243.0
CMS3_k127_5759869_64 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007101 244.0
CMS3_k127_5759869_65 Biotin carboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008349 248.0
CMS3_k127_5759869_66 transduction histidine kinase K07716 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000007194 244.0
CMS3_k127_5759869_67 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000003281 243.0
CMS3_k127_5759869_68 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003371 233.0
CMS3_k127_5759869_69 MobA-like NTP transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000008944 220.0
CMS3_k127_5759869_7 AMP-binding enzyme K00666 - - 1.313e-203 650.0
CMS3_k127_5759869_70 Predicted membrane protein (DUF2238) - - - 0.0000000000000000000000000000000000000000000000000000000001905 216.0
CMS3_k127_5759869_71 tRNA modification K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000001595 199.0
CMS3_k127_5759869_73 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000009627 198.0
CMS3_k127_5759869_74 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000000000000000174 189.0
CMS3_k127_5759869_75 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000004435 177.0
CMS3_k127_5759869_76 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000002173 188.0
CMS3_k127_5759869_77 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000003901 166.0
CMS3_k127_5759869_78 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000007133 162.0
CMS3_k127_5759869_79 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000001373 148.0
CMS3_k127_5759869_8 Mitochondrial fission ELM1 K07276 - - 7.722e-201 653.0
CMS3_k127_5759869_80 TIGRFAM methyltransferase FkbM family - - - 0.00000000000000000000000000000000009877 143.0
CMS3_k127_5759869_81 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.000000000000000000000000000000009664 134.0
CMS3_k127_5759869_82 Phosphotransferase enzyme family - - - 0.00000000000000000000000000004322 133.0
CMS3_k127_5759869_83 - - - - 0.0000000000000000000000000001537 119.0
CMS3_k127_5759869_84 LysM domain - - - 0.00000000000000000000000002483 120.0
CMS3_k127_5759869_85 Glycosyl transferases group 1 - - - 0.0000000000000000000000006398 120.0
CMS3_k127_5759869_86 Phosphorylase superfamily - - - 0.000000000000000000000001517 115.0
CMS3_k127_5759869_87 Trypsin - - - 0.00000000000000000006062 104.0
CMS3_k127_5759869_88 Phosphopantetheine attachment site - - - 0.00000000000002999 77.0
CMS3_k127_5759869_89 Domain of unknown function (DUF4172) - - - 0.0000000000001705 71.0
CMS3_k127_5759869_9 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 606.0
CMS3_k127_5759869_90 Cytochrome P460 K08738 - - 0.000000000000472 69.0
CMS3_k127_5759869_91 Cation transport regulator K06197 - - 0.00000000001896 66.0
CMS3_k127_5759869_92 Uncharacterized conserved protein (DUF2285) - - - 0.0000000001517 67.0
CMS3_k127_5759869_93 Biotin carboxylase - - - 0.00000000188 63.0
CMS3_k127_5759869_95 COG0477 Permeases of the major facilitator superfamily - - - 0.0001415 48.0
CMS3_k127_5759869_96 Phosphoglycerate mutase K15634 - 5.4.2.12 0.0002309 48.0
CMS3_k127_5773193_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 6.248e-300 934.0
CMS3_k127_5773193_1 Sulfite reductase K00381 - 1.8.1.2 1.911e-271 845.0
CMS3_k127_5773193_10 probably responsible for the translocation of the substrate across the membrane K02026,K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 472.0
CMS3_k127_5773193_11 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 462.0
CMS3_k127_5773193_12 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 439.0
CMS3_k127_5773193_13 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 412.0
CMS3_k127_5773193_14 NADP-dependent oxidoreductase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 383.0
CMS3_k127_5773193_15 ubiquinone menaquinone biosynthesis methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 315.0
CMS3_k127_5773193_16 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 312.0
CMS3_k127_5773193_17 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001773 276.0
CMS3_k127_5773193_18 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000004933 224.0
CMS3_k127_5773193_19 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000001412 212.0
CMS3_k127_5773193_2 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 6.005e-256 796.0
CMS3_k127_5773193_20 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000004542 201.0
CMS3_k127_5773193_21 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000000000000000000000000000000000000002936 162.0
CMS3_k127_5773193_22 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000007065 164.0
CMS3_k127_5773193_23 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000003985 136.0
CMS3_k127_5773193_24 serine-type endopeptidase activity - - - 0.00000000000000000000000000001359 135.0
CMS3_k127_5773193_25 nuclease K16561 - - 0.0000000000000000000000000006919 118.0
CMS3_k127_5773193_26 cheY-homologous receiver domain - - - 0.00000000000000000000000002432 115.0
CMS3_k127_5773193_27 Protein of unknown function (DUF2849) - - - 0.00000000000000005961 95.0
CMS3_k127_5773193_3 ABC-type sugar transport system periplasmic component K05813 - - 5.319e-229 715.0
CMS3_k127_5773193_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0000302,GO:0000305,GO:0003674,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0017076,GO:0019725,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0065007,GO:0065008,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901700 1.8.1.7 5.931e-204 643.0
CMS3_k127_5773193_5 Domain of unknown function DUF87 K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 601.0
CMS3_k127_5773193_6 ABC-type sugar transport systems permease components K05814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 514.0
CMS3_k127_5773193_7 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 512.0
CMS3_k127_5773193_8 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015169,GO:0015399,GO:0015405,GO:0015430,GO:0015605,GO:0015711,GO:0015748,GO:0015794,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1901264,GO:1901505 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 503.0
CMS3_k127_5773193_9 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 482.0
CMS3_k127_5780741_0 Adenylate cyclase - - - 4.245e-213 677.0
CMS3_k127_5780741_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 3.978e-209 660.0
CMS3_k127_5780741_10 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000001513 111.0
CMS3_k127_5780741_11 PFAM TadE family protein K02282 - - 0.00000000086 66.0
CMS3_k127_5780741_12 guanyl-nucleotide exchange factor activity - - - 0.0000001494 64.0
CMS3_k127_5780741_13 PFAM TadE family protein - - - 0.0000008589 57.0
CMS3_k127_5780741_14 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K16881 - 2.7.7.13,5.4.2.8 0.00005297 55.0
CMS3_k127_5780741_15 Sucrase/ferredoxin-like - - - 0.0003415 49.0
CMS3_k127_5780741_2 5-aminolevulinic acid synthase K00643 - 2.3.1.37 8.355e-200 628.0
CMS3_k127_5780741_3 Psort location Cytoplasmic, score 7.50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 547.0
CMS3_k127_5780741_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 535.0
CMS3_k127_5780741_5 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 467.0
CMS3_k127_5780741_6 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 337.0
CMS3_k127_5780741_7 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006173 264.0
CMS3_k127_5780741_8 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000002945 192.0
CMS3_k127_5780741_9 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000008686 173.0
CMS3_k127_5847023_0 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0071704 3.5.4.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 414.0
CMS3_k127_5847023_1 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal K10714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 323.0
CMS3_k127_5847023_10 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005738 244.0
CMS3_k127_5847023_11 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000000001094 231.0
CMS3_k127_5847023_12 Histidine biosynthesis protein K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000001004 223.0
CMS3_k127_5847023_13 4-HFC-P synthase - - - 0.00000000000000000000000000000000000000000000000000000001206 214.0
CMS3_k127_5847023_14 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.00000000000000000000000000000000000000001153 157.0
CMS3_k127_5847023_2 PFAM GHMP kinases C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 325.0
CMS3_k127_5847023_3 Hydantoinase/oxoprolinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 297.0
CMS3_k127_5847023_4 Formaldehyde-activating enzyme (Fae) K10713 - 4.2.1.147 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000169 273.0
CMS3_k127_5847023_5 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005863 282.0
CMS3_k127_5847023_6 ATP-grasp domain K06913 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001332 284.0
CMS3_k127_5847023_7 RimK-like ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000832 290.0
CMS3_k127_5847023_8 formylmethanofuran dehydrogenase activity K00202 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001488 273.0
CMS3_k127_5847023_9 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000002286 273.0
CMS3_k127_5851147_0 Amidohydrolase family - - - 4.545e-224 709.0
CMS3_k127_5851147_1 Poly-beta-hydroxybutyrate polymerase K03821 - - 2.593e-212 672.0
CMS3_k127_5851147_2 Belongs to the DNA photolyase family K01669 - 4.1.99.3 1.563e-206 653.0
CMS3_k127_5851147_3 metal ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 559.0
CMS3_k127_5851147_4 Belongs to the DapA family K21062 - 3.5.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
CMS3_k127_5851147_5 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003196 279.0
CMS3_k127_5851147_6 Cytochrome b/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000109 246.0
CMS3_k127_5867467_0 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 6.685e-288 902.0
CMS3_k127_5867467_1 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 586.0
CMS3_k127_5867467_10 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000003659 244.0
CMS3_k127_5867467_2 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 544.0
CMS3_k127_5867467_3 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 542.0
CMS3_k127_5867467_4 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 496.0
CMS3_k127_5867467_5 branched-chain amino acid K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 448.0
CMS3_k127_5867467_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 439.0
CMS3_k127_5867467_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 379.0
CMS3_k127_5867467_8 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 385.0
CMS3_k127_5867467_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 301.0
CMS3_k127_5904484_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1371.0
CMS3_k127_5904484_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.797e-313 969.0
CMS3_k127_5904484_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 391.0
CMS3_k127_5904484_11 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 393.0
CMS3_k127_5904484_12 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 379.0
CMS3_k127_5904484_13 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 369.0
CMS3_k127_5904484_14 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 338.0
CMS3_k127_5904484_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 313.0
CMS3_k127_5904484_16 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 306.0
CMS3_k127_5904484_17 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 294.0
CMS3_k127_5904484_18 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 299.0
CMS3_k127_5904484_19 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007483 276.0
CMS3_k127_5904484_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 2.888e-267 833.0
CMS3_k127_5904484_20 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009017 263.0
CMS3_k127_5904484_21 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000009558 248.0
CMS3_k127_5904484_22 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000001183 238.0
CMS3_k127_5904484_23 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000445 212.0
CMS3_k127_5904484_24 EamA-like transporter family - - - 0.0000000000000000000000000000000000000006983 162.0
CMS3_k127_5904484_25 Sporulation related domain - - - 0.00000000000000000000000000000000000001015 157.0
CMS3_k127_5904484_26 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000001195 149.0
CMS3_k127_5904484_27 COG3293 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000003182 147.0
CMS3_k127_5904484_28 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000006302 154.0
CMS3_k127_5904484_29 Belongs to the HesB IscA family K13628,K15724 - - 0.000000000000000000000000000000000001045 141.0
CMS3_k127_5904484_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.002e-209 663.0
CMS3_k127_5904484_30 COG3293 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000003142 127.0
CMS3_k127_5904484_31 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000001051 126.0
CMS3_k127_5904484_32 Protein conserved in bacteria K09991 - - 0.000000000000000000000000005332 119.0
CMS3_k127_5904484_33 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000002259 98.0
CMS3_k127_5904484_34 COG3293 Transposase and inactivated derivatives - - - 0.00000000000000001667 87.0
CMS3_k127_5904484_36 PBS lyase HEAT domain protein repeat-containing protein K22221 - - 0.0000000000298 75.0
CMS3_k127_5904484_38 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.0001156 51.0
CMS3_k127_5904484_39 Putative transposase of IS4/5 family (DUF4096) - - - 0.0001163 49.0
CMS3_k127_5904484_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 591.0
CMS3_k127_5904484_5 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 540.0
CMS3_k127_5904484_6 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 449.0
CMS3_k127_5904484_7 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 451.0
CMS3_k127_5904484_8 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 427.0
CMS3_k127_5904484_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 396.0
CMS3_k127_5910277_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 466.0
CMS3_k127_5910277_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000357 86.0
CMS3_k127_592168_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 0.0 1457.0
CMS3_k127_592168_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.392e-285 895.0
CMS3_k127_592168_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 501.0
CMS3_k127_592168_11 AFG1-like ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 476.0
CMS3_k127_592168_12 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 407.0
CMS3_k127_592168_13 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 380.0
CMS3_k127_592168_14 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 345.0
CMS3_k127_592168_15 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 357.0
CMS3_k127_592168_16 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 314.0
CMS3_k127_592168_17 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008291 283.0
CMS3_k127_592168_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000001486 222.0
CMS3_k127_592168_19 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000001308 211.0
CMS3_k127_592168_2 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 4.376e-233 736.0
CMS3_k127_592168_20 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000008761 214.0
CMS3_k127_592168_21 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000001226 198.0
CMS3_k127_592168_22 Phospholipid N-methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000001077 172.0
CMS3_k127_592168_23 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000001644 86.0
CMS3_k127_592168_24 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000001061 77.0
CMS3_k127_592168_25 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000006654 66.0
CMS3_k127_592168_26 protein conserved in bacteria K09921 - - 0.0000000001367 71.0
CMS3_k127_592168_27 Transcriptional regulator K07734 - - 0.0000002742 54.0
CMS3_k127_592168_28 Outer membrane protein beta-barrel domain - - - 0.0003856 53.0
CMS3_k127_592168_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 2.274e-215 674.0
CMS3_k127_592168_4 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 4.808e-208 658.0
CMS3_k127_592168_5 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009095 621.0
CMS3_k127_592168_6 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 568.0
CMS3_k127_592168_7 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 541.0
CMS3_k127_592168_8 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 509.0
CMS3_k127_592168_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 491.0
CMS3_k127_5941232_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 1.85e-274 852.0
CMS3_k127_5941232_1 Cysteine-rich domain K11473 - - 4.201e-209 657.0
CMS3_k127_5941232_10 CHAP domain - - - 0.000000000000000000000000000000000000000004431 163.0
CMS3_k127_5941232_11 Response regulator receiver K13589 - - 0.00000000000000000000000000000000000000006781 158.0
CMS3_k127_5941232_12 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000001835 108.0
CMS3_k127_5941232_13 Phage integrase family - - - 0.000000000000000008648 84.0
CMS3_k127_5941232_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000000005504 82.0
CMS3_k127_5941232_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 498.0
CMS3_k127_5941232_3 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 468.0
CMS3_k127_5941232_4 Zinc-binding dehydrogenase K00001,K19745 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 450.0
CMS3_k127_5941232_5 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 396.0
CMS3_k127_5941232_6 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 380.0
CMS3_k127_5941232_7 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001083 270.0
CMS3_k127_5941232_8 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000004086 220.0
CMS3_k127_5941232_9 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000005074 194.0
CMS3_k127_5978976_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 550.0
CMS3_k127_5978976_1 Acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 535.0
CMS3_k127_5978976_10 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000000000000005385 173.0
CMS3_k127_5978976_11 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000002696 142.0
CMS3_k127_5978976_12 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000005524 140.0
CMS3_k127_5978976_13 - - - - 0.00000000000000000000000000000000001317 144.0
CMS3_k127_5978976_14 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000000000000000002684 107.0
CMS3_k127_5978976_2 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 466.0
CMS3_k127_5978976_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 453.0
CMS3_k127_5978976_4 Adenylate Guanylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 404.0
CMS3_k127_5978976_5 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000906 371.0
CMS3_k127_5978976_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 332.0
CMS3_k127_5978976_7 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 321.0
CMS3_k127_5978976_8 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000000000000000000001494 207.0
CMS3_k127_5978976_9 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000001478 192.0
CMS3_k127_5980144_0 Asparagine synthase K01953 - 6.3.5.4 2.872e-267 842.0
CMS3_k127_5980144_1 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 541.0
CMS3_k127_5980144_2 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 474.0
CMS3_k127_5980144_3 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 387.0
CMS3_k127_5980144_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 342.0
CMS3_k127_5980144_5 eight transmembrane protein EpsH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 311.0
CMS3_k127_5980144_6 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000291 260.0
CMS3_k127_5980144_7 COG0314 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000000009748 239.0
CMS3_k127_5980144_8 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000000000005871 124.0
CMS3_k127_5980144_9 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000006769 85.0
CMS3_k127_5982407_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.342e-208 677.0
CMS3_k127_5982407_1 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 1.263e-206 668.0
CMS3_k127_5982407_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 466.0
CMS3_k127_5982407_11 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 440.0
CMS3_k127_5982407_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 392.0
CMS3_k127_5982407_13 Belongs to the D-alanine--D-alanine ligase family K00075,K01921 - 1.3.1.98,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 381.0
CMS3_k127_5982407_14 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 379.0
CMS3_k127_5982407_15 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 386.0
CMS3_k127_5982407_16 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 372.0
CMS3_k127_5982407_17 Tellurite resistance protein TerB K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 346.0
CMS3_k127_5982407_18 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 326.0
CMS3_k127_5982407_19 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 301.0
CMS3_k127_5982407_2 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 586.0
CMS3_k127_5982407_20 COG3023 Negative regulator of beta-lactamase expression K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008448 285.0
CMS3_k127_5982407_21 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003049 264.0
CMS3_k127_5982407_22 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000003109 170.0
CMS3_k127_5982407_23 - - - - 0.0000000000000000000000000009376 116.0
CMS3_k127_5982407_24 - - - - 0.00000000000003838 85.0
CMS3_k127_5982407_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 591.0
CMS3_k127_5982407_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 587.0
CMS3_k127_5982407_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 560.0
CMS3_k127_5982407_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 561.0
CMS3_k127_5982407_7 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 572.0
CMS3_k127_5982407_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 507.0
CMS3_k127_5982407_9 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 473.0
CMS3_k127_5999844_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 600.0
CMS3_k127_5999844_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 577.0
CMS3_k127_5999844_10 - - - - 0.0000000000000000000004294 99.0
CMS3_k127_5999844_11 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000005943 71.0
CMS3_k127_5999844_12 - - - - 0.00000000002897 70.0
CMS3_k127_5999844_2 COG1520 FOG WD40-like repeat K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 517.0
CMS3_k127_5999844_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 398.0
CMS3_k127_5999844_4 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002377 278.0
CMS3_k127_5999844_5 - - - - 0.0000000000000000000000000000000000000000000000000001784 188.0
CMS3_k127_5999844_6 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000003701 183.0
CMS3_k127_5999844_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000003279 170.0
CMS3_k127_5999844_8 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000002747 166.0
CMS3_k127_5999844_9 Protein of unknown function (DUF2794) - - - 0.000000000000000000000009157 104.0
CMS3_k127_6036174_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 1.978e-254 825.0
CMS3_k127_6036174_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 4.025e-231 731.0
CMS3_k127_6036174_10 dehydrogenases and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002425 257.0
CMS3_k127_6036174_11 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000001199 224.0
CMS3_k127_6036174_12 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000000002234 210.0
CMS3_k127_6036174_13 FCD - - - 0.0000000000000000000000000000000000000000000000009827 184.0
CMS3_k127_6036174_14 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.000000000000000000000000000000000000451 144.0
CMS3_k127_6036174_15 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000001045 130.0
CMS3_k127_6036174_16 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000001384 108.0
CMS3_k127_6036174_17 - - - - 0.0000000000000001185 90.0
CMS3_k127_6036174_18 Ribosomal protein L34 K02914 - - 0.000000000000001825 77.0
CMS3_k127_6036174_19 monooxygenase activity - - - 0.000000001255 62.0
CMS3_k127_6036174_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 623.0
CMS3_k127_6036174_20 - - - - 0.0002964 44.0
CMS3_k127_6036174_3 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 514.0
CMS3_k127_6036174_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 480.0
CMS3_k127_6036174_5 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 374.0
CMS3_k127_6036174_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 347.0
CMS3_k127_6036174_7 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 347.0
CMS3_k127_6036174_8 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008387 278.0
CMS3_k127_6036174_9 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001164 267.0
CMS3_k127_6046235_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 375.0
CMS3_k127_6046235_1 Protein of unknown function (DUF3108) - - - 0.0000000000002882 80.0
CMS3_k127_6046235_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000001276 63.0
CMS3_k127_607322_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1082.0
CMS3_k127_607322_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1079.0
CMS3_k127_607322_10 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 513.0
CMS3_k127_607322_11 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 520.0
CMS3_k127_607322_12 PAS fold K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 520.0
CMS3_k127_607322_13 methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 475.0
CMS3_k127_607322_14 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 464.0
CMS3_k127_607322_15 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 455.0
CMS3_k127_607322_16 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 435.0
CMS3_k127_607322_17 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 419.0
CMS3_k127_607322_18 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 452.0
CMS3_k127_607322_19 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 424.0
CMS3_k127_607322_2 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 8.443e-304 955.0
CMS3_k127_607322_20 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 411.0
CMS3_k127_607322_21 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 407.0
CMS3_k127_607322_22 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 397.0
CMS3_k127_607322_23 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 394.0
CMS3_k127_607322_24 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 369.0
CMS3_k127_607322_25 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 362.0
CMS3_k127_607322_26 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 365.0
CMS3_k127_607322_27 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 343.0
CMS3_k127_607322_28 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 325.0
CMS3_k127_607322_29 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 329.0
CMS3_k127_607322_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18661 - - 7.455e-233 729.0
CMS3_k127_607322_30 flagellar motor protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 323.0
CMS3_k127_607322_31 signal transduction histidine kinase K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 331.0
CMS3_k127_607322_32 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 309.0
CMS3_k127_607322_33 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 302.0
CMS3_k127_607322_34 hydrolase (HAD superfamily) K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 301.0
CMS3_k127_607322_35 beta-lactamase domain protein K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 297.0
CMS3_k127_607322_36 cellulase activity K01727 - 4.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001236 303.0
CMS3_k127_607322_37 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001115 274.0
CMS3_k127_607322_38 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002089 262.0
CMS3_k127_607322_39 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000003774 233.0
CMS3_k127_607322_4 peptidase S45, penicillin amidase K01434 - 3.5.1.11 1.932e-227 732.0
CMS3_k127_607322_40 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000745 221.0
CMS3_k127_607322_41 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000001418 218.0
CMS3_k127_607322_42 BioY family K03523 - - 0.00000000000000000000000000000000000000000000000000000000000001592 221.0
CMS3_k127_607322_43 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000000000000000000000000006762 219.0
CMS3_k127_607322_44 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000000002357 198.0
CMS3_k127_607322_45 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000001946 196.0
CMS3_k127_607322_46 Thiamine monophosphate synthase - - - 0.0000000000000000000000000000000000000000000000001716 192.0
CMS3_k127_607322_47 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000004403 186.0
CMS3_k127_607322_48 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000007757 191.0
CMS3_k127_607322_49 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000001425 166.0
CMS3_k127_607322_5 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.917e-219 700.0
CMS3_k127_607322_50 Rdx family K07401 - - 0.0000000000000000000000000000000000001096 145.0
CMS3_k127_607322_51 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000000002512 136.0
CMS3_k127_607322_52 RDD family - - - 0.0000000000000000000000000000002517 130.0
CMS3_k127_607322_53 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000002829 125.0
CMS3_k127_607322_54 - - - - 0.00000000000000000000000000001817 128.0
CMS3_k127_607322_55 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000421 118.0
CMS3_k127_607322_56 zinc ion binding K12035 - 2.3.2.27 0.0000000000000000000000000001363 132.0
CMS3_k127_607322_57 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000008071 110.0
CMS3_k127_607322_58 PFAM Excinuclease ABC C subunit domain protein - - - 0.00000000000000000000009209 103.0
CMS3_k127_607322_59 Domain of unknown function (DUF4389) - - - 0.00000000000000000002187 100.0
CMS3_k127_607322_6 cysteine synthase K01697 - 4.2.1.22 4.199e-206 659.0
CMS3_k127_607322_60 Helix-turn-helix domain - - - 0.000000000000000005292 86.0
CMS3_k127_607322_61 ThiS family K03154 - - 0.00000003396 65.0
CMS3_k127_607322_7 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 585.0
CMS3_k127_607322_8 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 563.0
CMS3_k127_607322_9 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588 556.0
CMS3_k127_6076973_0 FAD dependent oxidoreductase central domain - - - 1.474e-297 921.0
CMS3_k127_6076973_1 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 2.716e-214 679.0
CMS3_k127_6076973_2 Molybdopterin oxidoreductase K00201 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 463.0
CMS3_k127_6076973_3 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.000000000000000000000001541 120.0
CMS3_k127_6076973_4 PFAM molydopterin dinucleotide-binding region K00203,K00336 - 1.2.7.12,1.6.5.3 0.0000000000000000003871 93.0
CMS3_k127_6081085_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 485.0
CMS3_k127_6081085_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 399.0
CMS3_k127_6081085_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 347.0
CMS3_k127_6081085_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 334.0
CMS3_k127_6081085_4 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 299.0
CMS3_k127_6081085_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002426 273.0
CMS3_k127_6081085_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003363 251.0
CMS3_k127_6081085_7 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000000000003993 187.0
CMS3_k127_6081085_8 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000000002701 143.0
CMS3_k127_6081085_9 - - - - 0.0001393 52.0
CMS3_k127_6102422_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 1.878e-216 687.0
CMS3_k127_6102422_1 Zn-dependent proteases and their inactivated homologs K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 610.0
CMS3_k127_6102422_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 400.0
CMS3_k127_6102422_3 sugar phosphatases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 339.0
CMS3_k127_6102422_4 Putative diguanylate phosphodiesterase K13593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 321.0
CMS3_k127_6102422_5 NADPH-dependent FMN reductase K03206,K19784,K22393 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0052873,GO:0055114,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.5.1.36,1.7.1.6 0.000000000000000000000000000000000002593 145.0
CMS3_k127_6102422_6 - - - - 0.0000000001098 68.0
CMS3_k127_6179137_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000006593 248.0
CMS3_k127_6179137_1 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000000835 219.0
CMS3_k127_6179137_2 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000000000000000000000001112 176.0
CMS3_k127_6179137_3 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000108 91.0
CMS3_k127_6237147_0 Transposase K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 313.0
CMS3_k127_6237147_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000002555 163.0
CMS3_k127_6237147_2 Endoribonuclease L-PSP - - - 0.00000000000000000000000002976 114.0
CMS3_k127_6250382_0 PFAM Type II secretion system protein E K02454 - - 1.157e-204 655.0
CMS3_k127_6250382_1 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 590.0
CMS3_k127_6250382_10 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 301.0
CMS3_k127_6250382_11 Pilus assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000005273 227.0
CMS3_k127_6250382_12 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000002113 209.0
CMS3_k127_6250382_13 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000003688 228.0
CMS3_k127_6250382_14 PFAM type II secretion system protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000368 191.0
CMS3_k127_6250382_15 general secretion pathway protein K02461 - - 0.0000000000000000000000000000000000000000000001745 183.0
CMS3_k127_6250382_16 Flp pilus assembly protein RcpC/CpaB - - - 0.0000000000000000000000000000000000000000000005399 179.0
CMS3_k127_6250382_17 PFAM General secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000004915 165.0
CMS3_k127_6250382_18 TadE-like protein - - - 0.000000000000000000000000000001154 136.0
CMS3_k127_6250382_19 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000001545 141.0
CMS3_k127_6250382_2 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 539.0
CMS3_k127_6250382_20 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000004534 124.0
CMS3_k127_6250382_21 ABC-type transport auxiliary lipoprotein component - - - 0.0000000000000000000000000003996 123.0
CMS3_k127_6250382_22 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.0000000000000000000000000004081 122.0
CMS3_k127_6250382_23 General secretion pathway protein H K02457 - - 0.0000000000000000000000000005026 125.0
CMS3_k127_6250382_24 Prokaryotic N-terminal methylation motif K02459 - - 0.000000000000000000000000009779 122.0
CMS3_k127_6250382_25 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.0000000000000000000000001867 113.0
CMS3_k127_6250382_26 STAS domain - - - 0.0000000000000000000000002984 115.0
CMS3_k127_6250382_27 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000005985 95.0
CMS3_k127_6250382_28 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000004633 66.0
CMS3_k127_6250382_29 PFAM ATP-binding region ATPase domain protein - - - 0.00000008259 64.0
CMS3_k127_6250382_3 transport systems, ATPase components K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 525.0
CMS3_k127_6250382_30 Transcriptional regulator - - - 0.000001248 62.0
CMS3_k127_6250382_32 Flp Fap pilin component K02651 - - 0.0002841 48.0
CMS3_k127_6250382_33 Histidine kinase - - - 0.0006703 51.0
CMS3_k127_6250382_4 ABC transporter substrate-binding protein PnrA-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 470.0
CMS3_k127_6250382_5 Pilus formation protein N terminal region K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 433.0
CMS3_k127_6250382_6 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 394.0
CMS3_k127_6250382_7 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 388.0
CMS3_k127_6250382_8 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 352.0
CMS3_k127_6250382_9 Type II secretion system K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 370.0
CMS3_k127_6272890_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 5.217e-277 865.0
CMS3_k127_6272890_1 Belongs to the ABC transporter superfamily K13896 - - 1.74e-247 788.0
CMS3_k127_6272890_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 394.0
CMS3_k127_6272890_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 359.0
CMS3_k127_6272890_12 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 337.0
CMS3_k127_6272890_13 PFAM peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 334.0
CMS3_k127_6272890_14 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 326.0
CMS3_k127_6272890_15 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 325.0
CMS3_k127_6272890_16 inositol mono-phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 308.0
CMS3_k127_6272890_17 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 290.0
CMS3_k127_6272890_18 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003761 263.0
CMS3_k127_6272890_19 cytochrome K08738 - - 0.000000000000000000000000000000000000000000000001403 182.0
CMS3_k127_6272890_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.047e-195 630.0
CMS3_k127_6272890_20 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000000000000000002627 174.0
CMS3_k127_6272890_21 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000005754 159.0
CMS3_k127_6272890_22 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000000002408 138.0
CMS3_k127_6272890_23 Yhs domain-containing protein - - - 0.00000000000000000000000000000000001651 141.0
CMS3_k127_6272890_24 PFAM D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000007899 141.0
CMS3_k127_6272890_25 - - - - 0.00000000000000000000000005126 110.0
CMS3_k127_6272890_26 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000002596 98.0
CMS3_k127_6272890_3 transport system, permease component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 593.0
CMS3_k127_6272890_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 530.0
CMS3_k127_6272890_5 binding-protein-dependent transport systems inner membrane component K13894 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0022857,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009161 515.0
CMS3_k127_6272890_6 COG0826 Collagenase and related proteases K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 471.0
CMS3_k127_6272890_7 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 466.0
CMS3_k127_6272890_8 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009555 468.0
CMS3_k127_6272890_9 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 427.0
CMS3_k127_6278361_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.821e-315 984.0
CMS3_k127_6278361_1 Gamma-glutamyltranspeptidase - - - 3.214e-216 683.0
CMS3_k127_6278361_10 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 383.0
CMS3_k127_6278361_11 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 374.0
CMS3_k127_6278361_12 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 355.0
CMS3_k127_6278361_13 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 303.0
CMS3_k127_6278361_14 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007361 257.0
CMS3_k127_6278361_15 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000002802 240.0
CMS3_k127_6278361_16 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006213 235.0
CMS3_k127_6278361_17 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000006181 242.0
CMS3_k127_6278361_18 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000001185 219.0
CMS3_k127_6278361_19 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000002489 200.0
CMS3_k127_6278361_2 Peptidase family M20/M25/M40 - - - 1.776e-194 617.0
CMS3_k127_6278361_20 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000001744 204.0
CMS3_k127_6278361_21 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000001455 195.0
CMS3_k127_6278361_22 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000001598 178.0
CMS3_k127_6278361_23 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.0000000000000000000000000000000000000000000000723 181.0
CMS3_k127_6278361_24 - - - - 0.00000000000000000000000000004797 128.0
CMS3_k127_6278361_25 - - - - 0.00000000000000000000000008759 118.0
CMS3_k127_6278361_26 Tetratricopeptide repeat - - - 0.0000000000000000000000009187 118.0
CMS3_k127_6278361_27 Sel1-like repeats. K07126 - - 0.000000000000000000000003786 114.0
CMS3_k127_6278361_28 Thioredoxin-like - - - 0.000000000000000000001825 108.0
CMS3_k127_6278361_29 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000007041 93.0
CMS3_k127_6278361_3 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 564.0
CMS3_k127_6278361_30 - - - - 0.00000000000000008941 95.0
CMS3_k127_6278361_31 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 0.00000000001076 77.0
CMS3_k127_6278361_32 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000655 53.0
CMS3_k127_6278361_4 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 565.0
CMS3_k127_6278361_5 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 541.0
CMS3_k127_6278361_6 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 441.0
CMS3_k127_6278361_7 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 419.0
CMS3_k127_6278361_8 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 442.0
CMS3_k127_6278361_9 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 375.0
CMS3_k127_6288243_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 1.105e-200 631.0
CMS3_k127_6288243_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 576.0
CMS3_k127_6288243_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007601 253.0
CMS3_k127_6288243_11 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004484 252.0
CMS3_k127_6288243_12 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000005306 230.0
CMS3_k127_6288243_13 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000002086 232.0
CMS3_k127_6288243_14 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000002179 229.0
CMS3_k127_6288243_15 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000008459 191.0
CMS3_k127_6288243_16 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000004636 142.0
CMS3_k127_6288243_17 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000006786 136.0
CMS3_k127_6288243_18 - - - - 0.000000000000000000000000000000333 136.0
CMS3_k127_6288243_19 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000000003529 133.0
CMS3_k127_6288243_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 542.0
CMS3_k127_6288243_20 GcrA cell cycle regulator K13583 - - 0.0000000000000000000000000000006386 126.0
CMS3_k127_6288243_21 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000003914 79.0
CMS3_k127_6288243_22 Cytochrome c - - - 0.0000000000000008973 83.0
CMS3_k127_6288243_23 Resolvase - - - 0.0000004618 53.0
CMS3_k127_6288243_24 Ankyrin repeat K06867,K21440 - - 0.0000005456 59.0
CMS3_k127_6288243_3 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 524.0
CMS3_k127_6288243_4 Zn-dependent alcohol dehydrogenases K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 451.0
CMS3_k127_6288243_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 408.0
CMS3_k127_6288243_6 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 321.0
CMS3_k127_6288243_7 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 308.0
CMS3_k127_6288243_8 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 288.0
CMS3_k127_6288243_9 Ribonuclease E/G family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002439 269.0
CMS3_k127_6471653_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1118.0
CMS3_k127_6471653_1 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1094.0
CMS3_k127_6471653_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.226e-206 667.0
CMS3_k127_6471653_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 512.0
CMS3_k127_6471653_4 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 476.0
CMS3_k127_6471653_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 402.0
CMS3_k127_6471653_6 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 402.0
CMS3_k127_6471653_7 phosphorelay signal transduction system - - - 0.0001356 48.0
CMS3_k127_6509464_0 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000004246 145.0
CMS3_k127_6509464_1 - - - - 0.0000000000008669 78.0
CMS3_k127_6509464_2 Endonuclease Exonuclease Phosphatase - - - 0.000000000006146 78.0
CMS3_k127_6509464_3 Glutaredoxin K03676 - - 0.000003077 57.0
CMS3_k127_652071_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 8.189e-265 831.0
CMS3_k127_652071_1 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 372.0
CMS3_k127_652071_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000004248 220.0
CMS3_k127_652071_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000007116 200.0
CMS3_k127_652071_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000004768 121.0
CMS3_k127_655876_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 2.626e-284 894.0
CMS3_k127_655876_1 Polysaccharide biosynthesis protein K13013 - - 1.094e-222 708.0
CMS3_k127_655876_10 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 417.0
CMS3_k127_655876_11 COG0436 Aspartate tyrosine aromatic aminotransferase K14261,K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 415.0
CMS3_k127_655876_12 Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 368.0
CMS3_k127_655876_13 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 341.0
CMS3_k127_655876_14 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851,K13007 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 302.0
CMS3_k127_655876_15 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000002161 256.0
CMS3_k127_655876_16 threonine efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006069 243.0
CMS3_k127_655876_17 ribonucleoside-diphosphate reductase activity K07735 - - 0.0000000000000000000000000000000000000000000000000000005862 199.0
CMS3_k127_655876_18 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000002816 191.0
CMS3_k127_655876_19 - - - - 0.0000000000000000000000000000001014 132.0
CMS3_k127_655876_2 COG0004 Ammonia permease K03320 - - 4.319e-222 696.0
CMS3_k127_655876_20 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000001575 102.0
CMS3_k127_655876_21 transcriptional regulator - - - 0.00000000000000000000003748 101.0
CMS3_k127_655876_22 Protein of unknown function (DUF1674) - - - 0.0000001195 60.0
CMS3_k127_655876_3 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 9.974e-222 700.0
CMS3_k127_655876_4 Metallopeptidase family M24 - - - 4.198e-196 619.0
CMS3_k127_655876_5 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 608.0
CMS3_k127_655876_6 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 597.0
CMS3_k127_655876_7 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 577.0
CMS3_k127_655876_8 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 487.0
CMS3_k127_655876_9 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 447.0
CMS3_k127_65794_0 malic enzyme K00029 - 1.1.1.40 2.888e-267 833.0
CMS3_k127_6620981_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 3.794e-307 953.0
CMS3_k127_6620981_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 1.754e-294 927.0
CMS3_k127_6620981_10 ATPases associated with a variety of cellular activities K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
CMS3_k127_6620981_11 Uracil-DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 296.0
CMS3_k127_6620981_12 Belongs to the BI1 family K06890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000584 253.0
CMS3_k127_6620981_13 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000001876 250.0
CMS3_k127_6620981_14 PFAM B3 4 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000008631 235.0
CMS3_k127_6620981_15 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000002002 226.0
CMS3_k127_6620981_16 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000000000813 203.0
CMS3_k127_6620981_17 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000004041 190.0
CMS3_k127_6620981_18 DinB family - - - 0.000000000000000000000000000000000000000001806 161.0
CMS3_k127_6620981_19 Low molecular weight phosphotyrosine protein phosphatase K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000001848 156.0
CMS3_k127_6620981_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 520.0
CMS3_k127_6620981_20 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000000001961 134.0
CMS3_k127_6620981_21 - - - - 0.0000008887 57.0
CMS3_k127_6620981_3 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 456.0
CMS3_k127_6620981_4 FIST_C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 407.0
CMS3_k127_6620981_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 366.0
CMS3_k127_6620981_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 374.0
CMS3_k127_6620981_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 327.0
CMS3_k127_6620981_8 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 325.0
CMS3_k127_6620981_9 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 325.0
CMS3_k127_6636812_0 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 303.0
CMS3_k127_6636812_1 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000001482 217.0
CMS3_k127_6636812_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000001561 140.0
CMS3_k127_6636812_3 ATPases associated with a variety of cellular activities K05779 - - 0.0000000000000006129 80.0
CMS3_k127_6649008_0 glutamate--cysteine ligase K01919 - 6.3.2.2 1.856e-214 677.0
CMS3_k127_6649008_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 373.0
CMS3_k127_6649008_10 Cupin domain - - - 0.0000000007375 65.0
CMS3_k127_6649008_11 protein import - - - 0.00002212 55.0
CMS3_k127_6649008_12 protein transport across the cell outer membrane K02452 - - 0.0001701 52.0
CMS3_k127_6649008_2 peptidase U62, modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 361.0
CMS3_k127_6649008_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008589 319.0
CMS3_k127_6649008_4 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 317.0
CMS3_k127_6649008_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000001482 220.0
CMS3_k127_6649008_6 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000004557 193.0
CMS3_k127_6649008_7 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000000000000000000121 171.0
CMS3_k127_6649008_8 Endoribonuclease L-PSP - - - 0.00000000000000000000000001663 113.0
CMS3_k127_6649008_9 PFAM Rhomboid family protein - - - 0.000000000001794 79.0
CMS3_k127_6679369_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 5.356e-264 822.0
CMS3_k127_6679369_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 2.827e-244 765.0
CMS3_k127_6679369_10 Helix-turn-helix K21498 - - 0.0000000000000000000000000000008348 124.0
CMS3_k127_6679369_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.482e-202 640.0
CMS3_k127_6679369_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 338.0
CMS3_k127_6679369_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 314.0
CMS3_k127_6679369_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 300.0
CMS3_k127_6679369_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001386 242.0
CMS3_k127_6679369_7 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000001035 224.0
CMS3_k127_6679369_8 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000006759 188.0
CMS3_k127_6679369_9 GIY-YIG catalytic domain K07461 - - 0.00000000000000000000000000000000191 135.0
CMS3_k127_6687281_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 2.064e-238 763.0
CMS3_k127_6687281_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 4.531e-222 696.0
CMS3_k127_6687281_10 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 554.0
CMS3_k127_6687281_11 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 531.0
CMS3_k127_6687281_12 D-isomer specific 2-hydroxyacid dehydrogenase K03778,K18916 - 1.1.1.28,1.20.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 473.0
CMS3_k127_6687281_13 alpha/beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 434.0
CMS3_k127_6687281_14 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 421.0
CMS3_k127_6687281_15 KR domain K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 390.0
CMS3_k127_6687281_16 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 392.0
CMS3_k127_6687281_17 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 378.0
CMS3_k127_6687281_18 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 286.0
CMS3_k127_6687281_19 Polyhydroxyalkanoate synthesis repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003093 267.0
CMS3_k127_6687281_2 Amidohydrolase family - - - 2.151e-218 687.0
CMS3_k127_6687281_20 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000002972 221.0
CMS3_k127_6687281_21 peptidyl-tyrosine modification K06138 - - 0.0000000000000000000000002611 110.0
CMS3_k127_6687281_3 GAF domain K01768 - 4.6.1.1 2.687e-218 704.0
CMS3_k127_6687281_4 GGDEF domain - - - 6.182e-215 681.0
CMS3_k127_6687281_5 Belongs to the thiolase family K00626 - 2.3.1.9 6.032e-204 639.0
CMS3_k127_6687281_6 Aminotransferase class-III K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 624.0
CMS3_k127_6687281_7 MlrC C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 617.0
CMS3_k127_6687281_8 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005133 601.0
CMS3_k127_6687281_9 ABC-type dipeptide transport system periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 592.0
CMS3_k127_6737203_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 6.248e-198 637.0
CMS3_k127_6737203_1 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006868 267.0
CMS3_k127_6744463_0 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003685 280.0
CMS3_k127_6744463_1 transport system periplasmic component K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000001269 240.0
CMS3_k127_6744463_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000059 91.0
CMS3_k127_6748670_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 544.0
CMS3_k127_6748670_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 471.0
CMS3_k127_6748670_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 460.0
CMS3_k127_6748670_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007939 251.0
CMS3_k127_6748670_4 Popeye protein conserved region - - - 0.00000000000000000000000001487 119.0
CMS3_k127_6748670_5 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.00000000000000000004538 91.0
CMS3_k127_6763400_0 Terminase RNaseH-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 568.0
CMS3_k127_6763400_1 Phage portal protein, HK97 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 411.0
CMS3_k127_6763400_2 PFAM Terminase small subunit K07474 - - 0.000000000000000000000000000000001318 138.0
CMS3_k127_6763400_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000003507 126.0
CMS3_k127_6763400_4 Caudovirus prohead serine protease K06904 - - 0.000000000000000000000000009834 119.0
CMS3_k127_6791270_0 Amidohydrolase family K01464 - 3.5.2.2 1.019e-245 766.0
CMS3_k127_6791270_1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001304 246.0
CMS3_k127_6791270_2 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000477 171.0
CMS3_k127_6791270_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000001952 73.0
CMS3_k127_6818006_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.466e-273 848.0
CMS3_k127_6818006_1 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 574.0
CMS3_k127_6818006_10 - - - - 0.00000000000000000000000000000000000003662 151.0
CMS3_k127_6818006_11 - - - - 0.0000000000000000000000000000003519 132.0
CMS3_k127_6818006_12 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000001168 76.0
CMS3_k127_6818006_13 Family of unknown function (DUF695) - - - 0.0000000005768 67.0
CMS3_k127_6818006_14 Bacterial DNA-binding protein - - - 0.00000001844 66.0
CMS3_k127_6818006_2 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 556.0
CMS3_k127_6818006_3 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 511.0
CMS3_k127_6818006_4 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 444.0
CMS3_k127_6818006_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 441.0
CMS3_k127_6818006_6 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 440.0
CMS3_k127_6818006_7 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 365.0
CMS3_k127_6818006_8 Predicted integral membrane protein (DUF2189) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002465 281.0
CMS3_k127_6818006_9 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000004179 224.0
CMS3_k127_6827730_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1348.0
CMS3_k127_6827730_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 0.0 1062.0
CMS3_k127_6827730_10 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 489.0
CMS3_k127_6827730_11 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 481.0
CMS3_k127_6827730_12 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 433.0
CMS3_k127_6827730_13 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 390.0
CMS3_k127_6827730_14 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 373.0
CMS3_k127_6827730_15 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 370.0
CMS3_k127_6827730_16 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 316.0
CMS3_k127_6827730_17 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 306.0
CMS3_k127_6827730_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000841 280.0
CMS3_k127_6827730_19 EamA-like transporter family K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002583 292.0
CMS3_k127_6827730_2 COG1960 Acyl-CoA dehydrogenases K00248 - 1.3.8.1 4.645e-264 825.0
CMS3_k127_6827730_20 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003766 293.0
CMS3_k127_6827730_21 COG2186 Transcriptional regulators K05799,K14348 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000785 274.0
CMS3_k127_6827730_22 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000003175 211.0
CMS3_k127_6827730_23 PAS domain - - - 0.000000000000000000000000000000000000000000001512 172.0
CMS3_k127_6827730_24 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000002438 168.0
CMS3_k127_6827730_25 RF-1 domain K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000000000000000004294 161.0
CMS3_k127_6827730_26 Thioesterase - - - 0.00000000000000000000000000000000000000003394 156.0
CMS3_k127_6827730_27 Protein of unknown function (DUF992) - - - 0.0000000000000000000000000000000000000002889 156.0
CMS3_k127_6827730_28 Protein of unknown function (DUF1244) K09948 - - 0.00000000000000000000000000000000000003495 160.0
CMS3_k127_6827730_29 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000001011 140.0
CMS3_k127_6827730_3 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 9.966e-220 689.0
CMS3_k127_6827730_30 Uncharacterized protein conserved in bacteria (DUF2312) - - - 0.00000000000000000000000000000007639 127.0
CMS3_k127_6827730_31 - - - - 0.0000000000000000006836 97.0
CMS3_k127_6827730_32 SCP-2 sterol transfer family - - - 0.000000000000000003757 93.0
CMS3_k127_6827730_33 - - - - 0.0000000000004929 73.0
CMS3_k127_6827730_34 - - - - 0.00000000005234 69.0
CMS3_k127_6827730_35 Cytochrome c K08738 - - 0.00000002276 65.0
CMS3_k127_6827730_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 9.629e-213 669.0
CMS3_k127_6827730_5 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 1.231e-207 660.0
CMS3_k127_6827730_6 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 2.577e-206 661.0
CMS3_k127_6827730_7 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 602.0
CMS3_k127_6827730_8 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 591.0
CMS3_k127_6827730_9 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 550.0
CMS3_k127_6912681_0 malic enzyme K00029 - 1.1.1.40 0.0 1109.0
CMS3_k127_6912681_1 Type II/IV secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 577.0
CMS3_k127_6912681_10 Helix-turn-helix domain - - - 0.00000000000000000000000000007267 119.0
CMS3_k127_6912681_11 Type IV leader peptidase family - - - 0.00000000000000000000009225 105.0
CMS3_k127_6912681_12 peptidyl-tyrosine sulfation - - - 0.00000000000000002565 92.0
CMS3_k127_6912681_2 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 558.0
CMS3_k127_6912681_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 327.0
CMS3_k127_6912681_4 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 317.0
CMS3_k127_6912681_5 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000001358 202.0
CMS3_k127_6912681_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000006666 184.0
CMS3_k127_6912681_7 Type II secretion system (T2SS), protein F - - - 0.00000000000000000000000000000000000000000000009466 183.0
CMS3_k127_6912681_8 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000001951 189.0
CMS3_k127_6912681_9 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000004077 152.0
CMS3_k127_6990293_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.515e-250 777.0
CMS3_k127_6990293_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 9.154e-202 636.0
CMS3_k127_6990293_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 558.0
CMS3_k127_6990293_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 546.0
CMS3_k127_6990293_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 347.0
CMS3_k127_6990293_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
CMS3_k127_6990293_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000008625 208.0
CMS3_k127_6990293_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000001674 193.0
CMS3_k127_6990293_8 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000000000000341 162.0
CMS3_k127_6990293_9 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000002059 135.0
CMS3_k127_6998710_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1151.0
CMS3_k127_6998710_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1020.0
CMS3_k127_6998710_10 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 467.0
CMS3_k127_6998710_11 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 465.0
CMS3_k127_6998710_12 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 471.0
CMS3_k127_6998710_13 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 439.0
CMS3_k127_6998710_14 permease K03548 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 427.0
CMS3_k127_6998710_15 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 421.0
CMS3_k127_6998710_16 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 419.0
CMS3_k127_6998710_17 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 417.0
CMS3_k127_6998710_18 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 391.0
CMS3_k127_6998710_19 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 332.0
CMS3_k127_6998710_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 4.963e-297 925.0
CMS3_k127_6998710_20 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 329.0
CMS3_k127_6998710_21 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 301.0
CMS3_k127_6998710_22 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004811 273.0
CMS3_k127_6998710_23 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008367 276.0
CMS3_k127_6998710_24 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002716 269.0
CMS3_k127_6998710_25 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003648 251.0
CMS3_k127_6998710_26 cheY-homologous receiver domain K11443 - - 0.000000000000000000000000000000000000000000000000000000000000000001195 229.0
CMS3_k127_6998710_27 COG0593 ATPase involved in DNA replication initiation - - - 0.000000000000000000000000000000000000000000000000000000000000000003142 248.0
CMS3_k127_6998710_28 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000001098 207.0
CMS3_k127_6998710_29 Domain of unknown function (DUF1849) - - - 0.00000000000000000000000000000000000000000000000000000001124 209.0
CMS3_k127_6998710_3 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 3.854e-273 861.0
CMS3_k127_6998710_30 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000009099 192.0
CMS3_k127_6998710_31 - - - - 0.000000000000000000000000000000000000000000000001046 184.0
CMS3_k127_6998710_32 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000002076 190.0
CMS3_k127_6998710_33 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000002841 173.0
CMS3_k127_6998710_34 - - - - 0.0000000000000000000000000000000000000000000008134 171.0
CMS3_k127_6998710_35 - - - - 0.0000000000000000000000000000000000000000014 161.0
CMS3_k127_6998710_36 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000006565 152.0
CMS3_k127_6998710_37 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000154 155.0
CMS3_k127_6998710_38 Signal transduction protein - - - 0.000000000000000000000000000000000002394 143.0
CMS3_k127_6998710_39 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000002603 156.0
CMS3_k127_6998710_4 III protein, CoA-transferase family K07749 - 2.8.3.16 8.414e-196 617.0
CMS3_k127_6998710_40 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000001022 123.0
CMS3_k127_6998710_41 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000002069 137.0
CMS3_k127_6998710_42 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000001032 110.0
CMS3_k127_6998710_43 Pfam:DUF461 K09796 - - 0.000000000000000000000002265 110.0
CMS3_k127_6998710_44 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000002021 107.0
CMS3_k127_6998710_45 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000005214 96.0
CMS3_k127_6998710_46 - - - - 0.0000000000003688 78.0
CMS3_k127_6998710_5 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 584.0
CMS3_k127_6998710_6 response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 561.0
CMS3_k127_6998710_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 548.0
CMS3_k127_6998710_8 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 500.0
CMS3_k127_6998710_9 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 501.0
CMS3_k127_6998790_0 COG1138 Cytochrome c biogenesis factor K02198 - - 1.788e-288 906.0
CMS3_k127_6998790_1 ABC-type histidine transport system, ATPase component K02028,K10025 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 391.0
CMS3_k127_6998790_2 Bacterial periplasmic substrate-binding proteins K09997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 351.0
CMS3_k127_6998790_3 Binding-protein-dependent transport system inner membrane component K02029,K10020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 327.0
CMS3_k127_6998790_4 Binding-protein-dependent transport system inner membrane component K02029,K10019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 324.0
CMS3_k127_6998790_5 Redoxin K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000002306 229.0
CMS3_k127_6998790_6 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000004683 183.0
CMS3_k127_6998790_7 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000000003066 181.0
CMS3_k127_6998790_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000001872 62.0
CMS3_k127_6998790_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0009726 42.0
CMS3_k127_7021416_0 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.0000000000000000000000000000000000000000000000000000000000000000000001232 250.0
CMS3_k127_7021416_1 Animal haem peroxidase - - - 0.000000000000000000000000000000000000000000000000002807 188.0
CMS3_k127_7051843_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 4.151e-287 893.0
CMS3_k127_7051843_1 Biotin carboxylase C-terminal domain K01965,K01968,K13777 - 6.4.1.3,6.4.1.4,6.4.1.5 1.66e-276 865.0
CMS3_k127_7051843_10 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 342.0
CMS3_k127_7051843_11 Protein of unknown function (DUF1538) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 313.0
CMS3_k127_7051843_12 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 311.0
CMS3_k127_7051843_13 Enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 307.0
CMS3_k127_7051843_14 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 292.0
CMS3_k127_7051843_15 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001283 247.0
CMS3_k127_7051843_16 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002676 261.0
CMS3_k127_7051843_17 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000001338 243.0
CMS3_k127_7051843_18 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000000000000000000145 217.0
CMS3_k127_7051843_19 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000003036 215.0
CMS3_k127_7051843_2 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 1.679e-217 682.0
CMS3_k127_7051843_20 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000002315 199.0
CMS3_k127_7051843_21 carbohydrate binding K07336 - - 0.0000000000000000000000000000000000000000000000000000004646 200.0
CMS3_k127_7051843_22 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000000009962 198.0
CMS3_k127_7051843_23 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000002392 192.0
CMS3_k127_7051843_24 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000006909 186.0
CMS3_k127_7051843_25 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000001093 190.0
CMS3_k127_7051843_26 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000000009391 177.0
CMS3_k127_7051843_27 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000008626 176.0
CMS3_k127_7051843_28 Protein of unknown function (DUF1489) - - - 0.000000000000000000000000000000000000005067 154.0
CMS3_k127_7051843_29 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000009119 163.0
CMS3_k127_7051843_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 595.0
CMS3_k127_7051843_30 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000006203 150.0
CMS3_k127_7051843_31 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000008907 148.0
CMS3_k127_7051843_32 Belongs to the P(II) protein family - - - 0.000000000000000000000000000000004246 131.0
CMS3_k127_7051843_33 - - - - 0.0000000000000000000000002549 105.0
CMS3_k127_7051843_34 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000001698 91.0
CMS3_k127_7051843_35 GtrA-like protein - - - 0.00000000783 64.0
CMS3_k127_7051843_36 - - - - 0.00000005527 57.0
CMS3_k127_7051843_37 PFAM Taurine catabolism dioxygenase TauD TfdA K03119,K22303 - 1.14.11.17 0.0002999 44.0
CMS3_k127_7051843_4 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 597.0
CMS3_k127_7051843_5 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 442.0
CMS3_k127_7051843_6 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 419.0
CMS3_k127_7051843_7 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 412.0
CMS3_k127_7051843_8 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 391.0
CMS3_k127_7051843_9 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 387.0
CMS3_k127_7058069_0 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 3.751e-238 749.0
CMS3_k127_7058069_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 604.0
CMS3_k127_7058069_10 - - - - 0.00000000000000001817 90.0
CMS3_k127_7058069_11 Phage integrase, N-terminal SAM-like domain - - - 0.00000000003381 66.0
CMS3_k127_7058069_12 Resolvase, N terminal domain - - - 0.0000000006732 61.0
CMS3_k127_7058069_2 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 420.0
CMS3_k127_7058069_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 307.0
CMS3_k127_7058069_4 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004085 255.0
CMS3_k127_7058069_5 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006271 243.0
CMS3_k127_7058069_6 surface antigen - - - 0.000000000000000000000000000000000000000000003553 172.0
CMS3_k127_7058069_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000001548 155.0
CMS3_k127_7058069_8 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000007587 106.0
CMS3_k127_7083570_0 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 550.0
CMS3_k127_7083570_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 549.0
CMS3_k127_7083570_10 serine-type endopeptidase activity K04772,K08372 - - 0.000000000000000009072 93.0
CMS3_k127_7083570_11 PFAM response regulator receiver K07665 - - 0.000000005667 58.0
CMS3_k127_7083570_12 Flp Fap pilin component K02651 - - 0.00000006589 58.0
CMS3_k127_7083570_13 Protein of unknown function (DUF1344) - - - 0.0000001832 57.0
CMS3_k127_7083570_14 - - - - 0.00000109 51.0
CMS3_k127_7083570_18 Flp Fap pilin component K02651 - - 0.00006319 49.0
CMS3_k127_7083570_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 446.0
CMS3_k127_7083570_3 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 410.0
CMS3_k127_7083570_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 381.0
CMS3_k127_7083570_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 349.0
CMS3_k127_7083570_6 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 334.0
CMS3_k127_7083570_7 ETC complex I subunit K00329 - 1.6.5.3 0.0000000000000000000000000000000001175 139.0
CMS3_k127_7083570_8 PFAM HD domain - - - 0.00000000000000000000000000000001249 134.0
CMS3_k127_7083570_9 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00000000000000000000000000000007938 132.0
CMS3_k127_7087541_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 3.698e-225 706.0
CMS3_k127_7087541_1 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 5.421e-225 708.0
CMS3_k127_7087541_10 Domain of unknown function (DUF4410) - - - 0.00000000000000000000000000001832 135.0
CMS3_k127_7087541_11 response to stress - - - 0.000000002975 66.0
CMS3_k127_7087541_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 4.95e-224 705.0
CMS3_k127_7087541_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 565.0
CMS3_k127_7087541_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 452.0
CMS3_k127_7087541_5 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 437.0
CMS3_k127_7087541_6 Amino Acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 333.0
CMS3_k127_7087541_7 Protein of unknown function (DUF1194) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004444 254.0
CMS3_k127_7087541_8 PFAM Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000003738 167.0
CMS3_k127_7087541_9 cytochrome K17230 - - 0.0000000000000000000000000000000000000000003313 166.0
CMS3_k127_7112058_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.0 1032.0
CMS3_k127_7112058_1 COG1960 Acyl-CoA dehydrogenases K20035 - - 1.707e-233 736.0
CMS3_k127_7112058_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 386.0
CMS3_k127_7112058_11 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 379.0
CMS3_k127_7112058_12 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 331.0
CMS3_k127_7112058_13 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 316.0
CMS3_k127_7112058_14 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 300.0
CMS3_k127_7112058_15 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001394 281.0
CMS3_k127_7112058_16 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000001022 247.0
CMS3_k127_7112058_17 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006811 246.0
CMS3_k127_7112058_18 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000001999 239.0
CMS3_k127_7112058_19 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005477 228.0
CMS3_k127_7112058_2 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.423e-232 736.0
CMS3_k127_7112058_20 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000003894 224.0
CMS3_k127_7112058_21 COQ9 K18587 - - 0.0000000000000000000000000000000000000000000000000000000000009861 227.0
CMS3_k127_7112058_22 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000001885 148.0
CMS3_k127_7112058_23 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000022 147.0
CMS3_k127_7112058_24 Protein of unknown function (DUF2390) - - - 0.00000000000000000000000000000000003089 141.0
CMS3_k127_7112058_25 CHAT domain K11688,K21395 - - 0.000000000000000000000000000005017 139.0
CMS3_k127_7112058_26 protein conserved in bacteria K09790 - - 0.00000000000000000000000000008007 121.0
CMS3_k127_7112058_27 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000379 108.0
CMS3_k127_7112058_28 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000279 102.0
CMS3_k127_7112058_29 Protein of unknown function (DUF465) - - - 0.00000000000000007163 88.0
CMS3_k127_7112058_3 AMP-binding enzyme C-terminal domain K00666 - - 3.26e-229 758.0
CMS3_k127_7112058_30 Protein of unknown function (DUF465) - - - 0.000000001481 60.0
CMS3_k127_7112058_31 Domain of unknown function (DUF4169) - - - 0.00000002214 60.0
CMS3_k127_7112058_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 8.067e-217 683.0
CMS3_k127_7112058_5 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008224 589.0
CMS3_k127_7112058_6 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 502.0
CMS3_k127_7112058_7 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 464.0
CMS3_k127_7112058_8 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 445.0
CMS3_k127_7112058_9 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 402.0
CMS3_k127_7169234_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1316.0
CMS3_k127_7169234_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1166.0
CMS3_k127_7169234_10 COG0471 Di- and tricarboxylate transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 413.0
CMS3_k127_7169234_11 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 371.0
CMS3_k127_7169234_12 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 374.0
CMS3_k127_7169234_13 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 362.0
CMS3_k127_7169234_14 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 354.0
CMS3_k127_7169234_15 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 339.0
CMS3_k127_7169234_16 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 295.0
CMS3_k127_7169234_17 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001199 280.0
CMS3_k127_7169234_18 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000002752 278.0
CMS3_k127_7169234_19 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000002743 261.0
CMS3_k127_7169234_2 Trimethylamine methyltransferase (MTTB) - - - 7.409e-255 794.0
CMS3_k127_7169234_20 Domain of unknown function (DUF4115) K15539 - - 0.000000000000000000000000000000000000000000000000000000000000000001339 246.0
CMS3_k127_7169234_21 PFAM Methyltransferase type - - - 0.000000000000000000000000000000000000000000000000000000000000000009491 231.0
CMS3_k127_7169234_22 Belongs to the Nudix hydrolase family K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000005554 225.0
CMS3_k127_7169234_23 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000004679 226.0
CMS3_k127_7169234_24 CDP-archaeol synthase K19664 - 2.7.7.67 0.000000000000000000000000000000000000000000000000000501 188.0
CMS3_k127_7169234_25 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000003516 186.0
CMS3_k127_7169234_26 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000000000000004922 171.0
CMS3_k127_7169234_27 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.0000000000000000000000000000000004844 133.0
CMS3_k127_7169234_28 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000009814 129.0
CMS3_k127_7169234_29 Membrane - - - 0.000000000000000000000000008504 114.0
CMS3_k127_7169234_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.035e-198 625.0
CMS3_k127_7169234_30 Domain of unknown function (DUF4167) - - - 0.0000000000000003635 87.0
CMS3_k127_7169234_4 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 599.0
CMS3_k127_7169234_5 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 560.0
CMS3_k127_7169234_6 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 537.0
CMS3_k127_7169234_7 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 498.0
CMS3_k127_7169234_8 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 460.0
CMS3_k127_7169234_9 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 441.0
CMS3_k127_7207758_0 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 453.0
CMS3_k127_7207758_1 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000000000000000000000007235 220.0
CMS3_k127_7207758_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000001959 136.0
CMS3_k127_7207758_3 Acts as a magnesium transporter K06213 - - 0.000000000001247 70.0
CMS3_k127_7207758_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000005263 61.0
CMS3_k127_7256148_0 Aldehyde dehydrogenase family K13922,K15515 - 1.2.1.81,1.2.1.87 3.768e-208 677.0
CMS3_k127_7256148_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 587.0
CMS3_k127_7256148_2 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 473.0
CMS3_k127_7256148_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 428.0
CMS3_k127_7256148_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000001371 240.0
CMS3_k127_7256148_5 nuclease - - - 0.000000000000000000000000000000000000000004182 160.0
CMS3_k127_7256148_6 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000005318 96.0
CMS3_k127_7265601_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 5.964e-316 988.0
CMS3_k127_7265601_1 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 2.604e-295 913.0
CMS3_k127_7265601_10 Regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008956 267.0
CMS3_k127_7265601_11 KR domain K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000001558 267.0
CMS3_k127_7265601_12 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000000000000000000000003924 225.0
CMS3_k127_7265601_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000000000000000000000213 139.0
CMS3_k127_7265601_14 - - - - 0.000000000002916 71.0
CMS3_k127_7265601_2 Tripartite tricarboxylate transporter TctA family K07793 - - 8.471e-250 778.0
CMS3_k127_7265601_3 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 1.075e-238 741.0
CMS3_k127_7265601_4 PFAM Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 481.0
CMS3_k127_7265601_5 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009119 458.0
CMS3_k127_7265601_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 367.0
CMS3_k127_7265601_7 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 348.0
CMS3_k127_7265601_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 332.0
CMS3_k127_7265601_9 ADP-glyceromanno-heptose 6-epimerase activity K01709,K22025 - 1.1.1.410,4.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 330.0
CMS3_k127_7333590_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 4.537e-265 824.0
CMS3_k127_7333590_1 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 2.334e-249 791.0
CMS3_k127_7333590_10 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 307.0
CMS3_k127_7333590_11 Phospholipase/Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
CMS3_k127_7333590_12 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006958 253.0
CMS3_k127_7333590_13 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008247 253.0
CMS3_k127_7333590_14 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000001526 216.0
CMS3_k127_7333590_15 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.000000000000000000000000000000000000000000000000000000000002692 224.0
CMS3_k127_7333590_16 Cold shock protein domain K03704 - - 0.0000000000000000000000000000000000000000000000000000001301 203.0
CMS3_k127_7333590_17 Protein of unknown function (DUF952) - - - 0.0000000000000000000000000000000000000000000000444 171.0
CMS3_k127_7333590_19 bond formation protein, DsbB - - - 0.000000000000000000000000000000000000000002656 166.0
CMS3_k127_7333590_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.762e-241 753.0
CMS3_k127_7333590_20 SnoaL-like domain - - - 0.00000000000000000000000000000000003341 140.0
CMS3_k127_7333590_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 1.28e-215 680.0
CMS3_k127_7333590_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 416.0
CMS3_k127_7333590_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 380.0
CMS3_k127_7333590_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
CMS3_k127_7333590_7 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 371.0
CMS3_k127_7333590_8 fad dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 351.0
CMS3_k127_7333590_9 Peptidase S24-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 327.0
CMS3_k127_7408157_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 541.0
CMS3_k127_7408157_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 329.0
CMS3_k127_7408157_2 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 296.0
CMS3_k127_7408157_3 - - - - 0.000000000000000000000000000000000000000001436 160.0
CMS3_k127_7408157_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000001231 80.0
CMS3_k127_7427213_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1148.0
CMS3_k127_7427213_1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 3.352e-229 730.0
CMS3_k127_7427213_10 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004834 262.0
CMS3_k127_7427213_11 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000004949 239.0
CMS3_k127_7427213_12 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000001018 206.0
CMS3_k127_7427213_13 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000734 167.0
CMS3_k127_7427213_14 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000005342 116.0
CMS3_k127_7427213_15 - - - - 0.00000000000000000000000004697 111.0
CMS3_k127_7427213_16 Sporulation related domain - - - 0.00000000009672 64.0
CMS3_k127_7427213_17 Cysteine synthase K01738 - 2.5.1.47 0.0007442 43.0
CMS3_k127_7427213_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.2e-200 635.0
CMS3_k127_7427213_3 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 555.0
CMS3_k127_7427213_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 544.0
CMS3_k127_7427213_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 542.0
CMS3_k127_7427213_6 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 431.0
CMS3_k127_7427213_7 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
CMS3_k127_7427213_8 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 398.0
CMS3_k127_7427213_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 338.0
CMS3_k127_7451040_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.617e-232 727.0
CMS3_k127_7451040_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 336.0
CMS3_k127_7451040_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000002491 246.0
CMS3_k127_7451040_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000004284 171.0
CMS3_k127_747344_0 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 589.0
CMS3_k127_747344_1 Oxidative deamination of D-amino acids K00285 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 558.0
CMS3_k127_747344_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 552.0
CMS3_k127_747344_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 503.0
CMS3_k127_747344_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 291.0
CMS3_k127_747344_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000003193 241.0
CMS3_k127_747344_6 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000992 186.0
CMS3_k127_747344_7 Domain of unknown function (DUF427) - - - 0.000000000000000000000000005248 114.0
CMS3_k127_751239_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 500.0
CMS3_k127_751239_1 Domain of unknown function (DUF1848) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 336.0
CMS3_k127_7522680_0 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000008748 208.0
CMS3_k127_7522680_1 protein conserved in bacteria K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000009052 186.0
CMS3_k127_7522680_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000001198 111.0
CMS3_k127_7540792_0 AcrB/AcrD/AcrF family - - - 0.0 1110.0
CMS3_k127_7540792_1 Domain of unknown function (DUF3473) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 370.0
CMS3_k127_7540792_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 348.0
CMS3_k127_7540792_3 Type II secretory pathway, component ExeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 309.0
CMS3_k127_7540792_4 Protein conserved in bacteria K09987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002121 281.0
CMS3_k127_7540792_5 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000226 243.0
CMS3_k127_7540792_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000003285 181.0
CMS3_k127_7540792_7 Protein conserved in bacteria - - - 0.000000000000000002274 99.0
CMS3_k127_7540792_8 - - - - 0.00002354 48.0
CMS3_k127_7628396_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.249e-202 641.0
CMS3_k127_7628396_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 597.0
CMS3_k127_7628396_10 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 282.0
CMS3_k127_7628396_11 ROS/MUCR transcriptional regulator protein - - - 0.00000000000000000000000000000000000000000000000000000000000001161 217.0
CMS3_k127_7628396_12 universal stress protein UspA and related nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000004142 218.0
CMS3_k127_7628396_13 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000008046 212.0
CMS3_k127_7628396_14 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.000000000000000000000000000000000000000000000000003136 193.0
CMS3_k127_7628396_15 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000003619 125.0
CMS3_k127_7628396_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 530.0
CMS3_k127_7628396_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 435.0
CMS3_k127_7628396_4 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 431.0
CMS3_k127_7628396_5 xylanase chitin deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 383.0
CMS3_k127_7628396_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 356.0
CMS3_k127_7628396_7 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 329.0
CMS3_k127_7628396_8 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 289.0
CMS3_k127_7628396_9 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 285.0
CMS3_k127_7632010_0 Glycosyl hydrolases family 15 - - - 1.14e-258 809.0
CMS3_k127_7632010_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 3.013e-210 664.0
CMS3_k127_7632010_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.473e-203 637.0
CMS3_k127_7632010_3 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 580.0
CMS3_k127_7632010_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 556.0
CMS3_k127_7632010_5 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002924 286.0
CMS3_k127_7632010_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003586 260.0
CMS3_k127_7632010_7 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000002522 238.0
CMS3_k127_7632010_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000001213 196.0
CMS3_k127_7632010_9 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000001044 85.0
CMS3_k127_79463_0 2Fe-2S iron-sulfur cluster binding domain K00123 - 1.17.1.9 0.0 1330.0
CMS3_k127_79463_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1006.0
CMS3_k127_79463_10 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 426.0
CMS3_k127_79463_11 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 416.0
CMS3_k127_79463_12 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 412.0
CMS3_k127_79463_13 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 422.0
CMS3_k127_79463_14 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 407.0
CMS3_k127_79463_15 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 404.0
CMS3_k127_79463_16 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 402.0
CMS3_k127_79463_17 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 325.0
CMS3_k127_79463_18 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 312.0
CMS3_k127_79463_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003315 265.0
CMS3_k127_79463_2 Function of homologous gene experimentally demonstrated in an other organism K03407 - 2.7.13.3 9.292e-303 952.0
CMS3_k127_79463_20 Flagellar GTP-binding protein K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004782 260.0
CMS3_k127_79463_21 Flagellar hook protein flgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009669 247.0
CMS3_k127_79463_22 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000275 209.0
CMS3_k127_79463_23 COG0835 Chemotaxis signal transduction protein K03408 - - 0.000000000000000000000000000000000000000000000000000004205 194.0
CMS3_k127_79463_24 signal transduction histidine kinase K13588 - - 0.0000000000000000000000000000000000000000000000002803 184.0
CMS3_k127_79463_25 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000004665 157.0
CMS3_k127_79463_26 Ankyrin repeat - - - 0.000000000000000000000000000000000000001293 163.0
CMS3_k127_79463_27 - - - - 0.00000000000000000000000000000000000000886 166.0
CMS3_k127_79463_28 COG1317 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.00000000000000000000000000000000002737 143.0
CMS3_k127_79463_29 Protein of unknown function (DUF1153) - - - 0.000000000000000000000000000000001557 141.0
CMS3_k127_79463_3 Dehydrogenase K00122 - 1.17.1.9 3.118e-259 815.0
CMS3_k127_79463_30 Protein of unknown function (DUF3553) - - - 0.0000000000000006015 86.0
CMS3_k127_79463_4 COG1178 ABC-type Fe3 transport system, permease component K02011 - - 2.563e-245 773.0
CMS3_k127_79463_5 flagellum-specific ATP synthase K02412 - 3.6.3.14 2.616e-217 682.0
CMS3_k127_79463_6 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 2.022e-198 628.0
CMS3_k127_79463_7 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 597.0
CMS3_k127_79463_8 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 541.0
CMS3_k127_79463_9 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 492.0
CMS3_k127_83784_0 acyl-CoA transferases carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 481.0
CMS3_k127_83784_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002213 281.0
CMS3_k127_83784_2 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000278 222.0
CMS3_k127_83784_3 protein involved in benzoate metabolism K05782 - - 0.000000000000000000000000000000000000000000000000000000002185 216.0
CMS3_k127_83784_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000659 191.0
CMS3_k127_83784_5 response to stress - - - 0.000000000000000000000000000001541 131.0
CMS3_k127_928372_0 glutamine synthetase K01915 - 6.3.1.2 2.095e-242 752.0
CMS3_k127_928372_1 signal transduction histidine kinase K13587 - 2.7.13.3 5.258e-227 732.0
CMS3_k127_928372_10 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 333.0
CMS3_k127_928372_11 Flagellar biosynthetic protein FliR K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007789 259.0
CMS3_k127_928372_12 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002519 257.0
CMS3_k127_928372_13 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000001426 188.0
CMS3_k127_928372_14 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000003875 148.0
CMS3_k127_928372_15 FlhB HrpN YscU SpaS Family K04061 - - 0.00000000000000000000000002442 113.0
CMS3_k127_928372_16 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000000005076 109.0
CMS3_k127_928372_17 Flagellar biosynthetic protein FliQ K02420 - - 0.0000000000000000000000007629 106.0
CMS3_k127_928372_18 efflux protein K05834 - - 0.00000000000000000000002052 109.0
CMS3_k127_928372_19 Flagellar hook-basal body K02408 - - 0.000000000000000000001165 98.0
CMS3_k127_928372_2 Aldehyde dehydrogenase family - - - 5.317e-225 705.0
CMS3_k127_928372_20 flagellar K02418 - - 0.000000000000000000005306 96.0
CMS3_k127_928372_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 587.0
CMS3_k127_928372_4 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 561.0
CMS3_k127_928372_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 433.0
CMS3_k127_928372_6 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 414.0
CMS3_k127_928372_7 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 380.0
CMS3_k127_928372_8 Dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 347.0
CMS3_k127_928372_9 LysR substrate binding domain K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 342.0
CMS3_k127_957076_0 Belongs to the GcvT family K00314 - 1.5.8.3 0.0 1231.0
CMS3_k127_957076_1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00544,K00548 - 2.1.1.13,2.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 422.0
CMS3_k127_957076_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001034 247.0
CMS3_k127_957076_3 HAD-superfamily hydrolase subfamily IA, variant K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000004046 187.0
CMS3_k127_957076_4 Belongs to the bacterial histone-like protein family K03530 - - 0.0000000000000000000000000000000071 129.0
CMS3_k127_957076_5 Protein of unknown function (DUF1778) - - - 0.00000000000005891 75.0
CMS3_k127_957076_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000005692 70.0
CMS3_k127_957076_7 Histidine kinase - - - 0.00000003472 64.0
CMS3_k127_963004_0 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 1.5e-323 1003.0
CMS3_k127_963004_1 COG1960 Acyl-CoA dehydrogenases K14448 - 1.3.8.12 5.175e-257 804.0
CMS3_k127_963004_10 NUDIX domain K00949 - 2.7.6.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 320.0
CMS3_k127_963004_11 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000000000001081 173.0
CMS3_k127_963004_12 Acetyltransferase (GNAT) domain K03824 - - 0.0000000000000000000000000000000000000000003259 165.0
CMS3_k127_963004_13 Protein of unknown function (DUF3617) - - - 0.00000000000000000000000000000000000001661 152.0
CMS3_k127_963004_14 - - - - 0.00000000000000000000000002878 113.0
CMS3_k127_963004_15 HIUase/Transthyretin family K07127 - 3.5.2.17 0.0000000000000000000000791 115.0
CMS3_k127_963004_16 - - - - 0.0000000000000001856 83.0
CMS3_k127_963004_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K14446 - 1.3.1.85 2.16e-249 782.0
CMS3_k127_963004_3 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 499.0
CMS3_k127_963004_4 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 499.0
CMS3_k127_963004_5 TOBE domain K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008161 428.0
CMS3_k127_963004_6 succinylglutamate desuccinylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 434.0
CMS3_k127_963004_7 Binding-protein-dependent transport system inner membrane component K02054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 378.0
CMS3_k127_963004_8 NnrS protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 359.0
CMS3_k127_963004_9 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 340.0
CMS3_k127_964521_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 589.0
CMS3_k127_964521_1 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 333.0
CMS3_k127_964521_2 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000000000000003712 183.0
CMS3_k127_964521_3 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000006012 167.0