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Overview

ID MAG00571
Name CMS3_bin.82
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota_D
Class UBA1144
Order N074bin48
Family N074bin48
Genus N074bin48
Species N074bin48 sp041572575
Assembly information
Completeness (%) 88.77
Contamination (%) 3.74
GC content (%) 37.0
N50 (bp) 6,362
Genome size (bp) 2,233,882

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2114

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1033725_0 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000239 215.0
CMS3_k127_1033725_1 Transcription factor zinc-finger - - - 0.0000000000009634 75.0
CMS3_k127_1040178_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008199 353.0
CMS3_k127_1040178_1 Subtilase family - - - 0.000000000000000000000000000000000007989 149.0
CMS3_k127_1040178_2 - - - - 0.0000000000004076 77.0
CMS3_k127_1040178_3 B12 binding domain K01849 - 5.4.99.2 0.000000001429 59.0
CMS3_k127_105440_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 586.0
CMS3_k127_105440_1 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 548.0
CMS3_k127_105440_2 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 302.0
CMS3_k127_105440_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000925 237.0
CMS3_k127_105440_4 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000004729 150.0
CMS3_k127_105440_5 lipolytic protein G-D-S-L family - - - 0.000000001229 67.0
CMS3_k127_1060609_0 Belongs to the UPF0061 (SELO) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 484.0
CMS3_k127_1060609_1 PFAM MaoC domain protein dehydratase - - - 0.00000000000000000000000005863 112.0
CMS3_k127_1060609_2 - - - - 0.0000000000000000000000001737 108.0
CMS3_k127_1060609_3 PFAM HTH transcriptional regulator, MarR - - - 0.00000004304 55.0
CMS3_k127_106843_0 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000001081 173.0
CMS3_k127_106843_1 Acyl-CoA dehydrogenase, C-terminal domain K15980 - - 0.00000000000000000000000000000000000001303 151.0
CMS3_k127_1069821_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000003227 173.0
CMS3_k127_1069821_1 metalloendopeptidase activity K08602 - - 0.00000000000000001279 96.0
CMS3_k127_1069821_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000001363 86.0
CMS3_k127_1074492_0 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 305.0
CMS3_k127_1074492_1 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 300.0
CMS3_k127_1074492_2 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003702 249.0
CMS3_k127_107622_0 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000004081 203.0
CMS3_k127_107622_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000004351 152.0
CMS3_k127_107622_2 Periplasmic binding protein K02016 - - 0.0000000000099 72.0
CMS3_k127_108591_0 Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001357 282.0
CMS3_k127_1089143_1 Vitamin K-dependent gamma-carboxylase - - - 0.0000002675 63.0
CMS3_k127_1091321_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 6.358e-260 811.0
CMS3_k127_1091321_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 424.0
CMS3_k127_1091321_2 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000096 221.0
CMS3_k127_1091321_3 - K01574 - 4.1.1.4 0.00000000000000000000000000000000000005512 153.0
CMS3_k127_1091321_4 response regulator K02657,K03413 - - 0.00000000000000000003365 95.0
CMS3_k127_1091321_5 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000006758 93.0
CMS3_k127_1091321_6 - - - - 0.00000000000000000455 90.0
CMS3_k127_1108295_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 512.0
CMS3_k127_1108295_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 422.0
CMS3_k127_1108295_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 310.0
CMS3_k127_1108295_3 peroxidase activity K00435 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 287.0
CMS3_k127_1108295_4 CoA-binding protein K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000886 207.0
CMS3_k127_1108295_5 arsenate reductase K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.000000000000000000000000000000000006099 139.0
CMS3_k127_1108295_6 regulation of translation K03530 - - 0.000000000000000000000000000007997 121.0
CMS3_k127_1108295_7 - - - - 0.000000000000000000001089 101.0
CMS3_k127_1108295_8 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000006856 91.0
CMS3_k127_110933_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 432.0
CMS3_k127_1129716_0 Papain-like cysteine protease AvrRpt2 K06992 - - 0.000000000000000000000000000000000000000000000000008918 188.0
CMS3_k127_1129716_1 - - - - 0.000001468 55.0
CMS3_k127_1135098_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 380.0
CMS3_k127_1135098_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003038 241.0
CMS3_k127_1135098_2 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000002856 192.0
CMS3_k127_1135098_3 EamA-like transporter family - - - 0.0000000000000000000000000000000005667 142.0
CMS3_k127_1135909_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000001276 192.0
CMS3_k127_1135909_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000001162 104.0
CMS3_k127_1163792_0 nucleotide-excision repair K03702,K08999 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 8.647e-267 826.0
CMS3_k127_1184083_0 Glycine cleavage system P-protein K00281 - 1.4.4.2 0.0 1203.0
CMS3_k127_1184083_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000004618 221.0
CMS3_k127_1184083_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000003432 164.0
CMS3_k127_1184083_3 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000007324 142.0
CMS3_k127_1184083_4 SurA N-terminal domain K03769,K07533 - 5.2.1.8 0.0000000005713 68.0
CMS3_k127_1193557_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 7.142e-209 670.0
CMS3_k127_1193557_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 490.0
CMS3_k127_1193557_2 Response receiver-modulated cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 298.0
CMS3_k127_1193557_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000001396 244.0
CMS3_k127_1196714_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 341.0
CMS3_k127_1196714_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 288.0
CMS3_k127_1196714_2 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001511 283.0
CMS3_k127_1196714_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000001866 274.0
CMS3_k127_1196714_4 Renal dipeptidase family protein K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000002684 185.0
CMS3_k127_1196714_5 - - - - 0.00000000000000000000000000000000000001669 149.0
CMS3_k127_1196714_6 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000002031 69.0
CMS3_k127_1196714_7 Phosphopantetheine attachment site K02078 - - 0.00001949 49.0
CMS3_k127_122039_0 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003685 271.0
CMS3_k127_122039_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000001326 158.0
CMS3_k127_122039_2 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 GO:0001882,GO:0001884,GO:0003674,GO:0003824,GO:0004126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006216,GO:0006217,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008655,GO:0009056,GO:0009058,GO:0009116,GO:0009119,GO:0009120,GO:0009164,GO:0009972,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0036094,GO:0042454,GO:0042802,GO:0043094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046087,GO:0046092,GO:0046121,GO:0046125,GO:0046127,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047844,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.5.4.5 0.00000000000000000000000000000000000000003572 155.0
CMS3_k127_1228309_0 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000002147 204.0
CMS3_k127_1228309_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000001795 145.0
CMS3_k127_1228309_2 transcriptional regulator K16137 - - 0.00000000000000000003235 95.0
CMS3_k127_1231194_0 WYL domain K13572 - - 0.00000000000000000009736 101.0
CMS3_k127_1231194_1 Cytochrome P460 - - - 0.0000002278 55.0
CMS3_k127_123145_0 alpha-ribazole phosphatase activity K00850,K21071 - 2.7.1.11,2.7.1.90 2.09e-306 957.0
CMS3_k127_123145_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000004983 226.0
CMS3_k127_1268733_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.706e-290 913.0
CMS3_k127_1268733_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 464.0
CMS3_k127_1268733_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 426.0
CMS3_k127_1268733_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 388.0
CMS3_k127_1268733_4 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 314.0
CMS3_k127_1268733_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004719 251.0
CMS3_k127_1268733_6 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000002184 104.0
CMS3_k127_1268733_7 Protein of unknown function (DUF456) K09793 - - 0.00000000000008377 78.0
CMS3_k127_1273601_0 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003462 263.0
CMS3_k127_1273601_1 Glycosyl transferase family 21 - - - 0.000000005035 63.0
CMS3_k127_1281616_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000001813 166.0
CMS3_k127_1281616_1 Cupin - - - 0.00000000000000000000000001387 113.0
CMS3_k127_1281616_2 Cupin 2, conserved barrel domain protein - - - 0.00000006025 58.0
CMS3_k127_129686_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1011.0
CMS3_k127_129686_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 549.0
CMS3_k127_129686_2 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 317.0
CMS3_k127_129686_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 301.0
CMS3_k127_129686_4 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 303.0
CMS3_k127_129686_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000003375 245.0
CMS3_k127_129686_6 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000001527 114.0
CMS3_k127_129686_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000185 95.0
CMS3_k127_129686_8 Protein of unknown function, DUF255 K04084 - 1.8.1.8 0.00000000000006134 78.0
CMS3_k127_129686_9 Belongs to the 'phage' integrase family - - - 0.0000000009938 63.0
CMS3_k127_130710_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 366.0
CMS3_k127_130710_1 FAD linked oxidases, C-terminal domain K11472 - - 0.0000000000000000000000000000000000000000000000000001741 200.0
CMS3_k127_1329502_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 412.0
CMS3_k127_1329502_1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001183 221.0
CMS3_k127_1329502_2 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000009166 160.0
CMS3_k127_1329502_3 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000001256 138.0
CMS3_k127_1329502_4 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000009151 138.0
CMS3_k127_1329502_5 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000003924 126.0
CMS3_k127_1329502_6 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000001383 55.0
CMS3_k127_1374300_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009884 421.0
CMS3_k127_1397278_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.939e-237 741.0
CMS3_k127_1397278_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.292e-222 696.0
CMS3_k127_1397278_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 314.0
CMS3_k127_1397278_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000615 226.0
CMS3_k127_1397278_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000001961 92.0
CMS3_k127_1397278_5 ATP synthase B/B' CF(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000471 88.0
CMS3_k127_1397278_6 ATP synthase B/B' CF(0) K02109 - - 0.00001999 53.0
CMS3_k127_1405602_0 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000000000000000000000000000000000000000003096 210.0
CMS3_k127_1405602_1 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000001594 170.0
CMS3_k127_1405602_2 SpoIIAA-like - - - 0.0000004287 53.0
CMS3_k127_1454458_0 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 335.0
CMS3_k127_1454458_1 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000005873 202.0
CMS3_k127_1454458_2 PFAM regulatory protein TetR - - - 0.000000000000000000459 95.0
CMS3_k127_1456602_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 291.0
CMS3_k127_1456602_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001001 241.0
CMS3_k127_1456602_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000009311 169.0
CMS3_k127_1462374_0 GTP-binding protein TypA K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 340.0
CMS3_k127_1462374_1 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006073 279.0
CMS3_k127_1462374_2 cellulose binding K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000282 222.0
CMS3_k127_1462374_3 - - - - 0.00000000000000000000000000000000000000000003877 166.0
CMS3_k127_1462374_4 monooxygenase activity - - - 0.00000000000000000000000001119 114.0
CMS3_k127_1464087_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009434 313.0
CMS3_k127_1464087_1 CBS domain - - - 0.000000000000000000000000000000000000000000000201 171.0
CMS3_k127_1464087_2 pyrroloquinoline quinone binding - - - 0.0009181 45.0
CMS3_k127_1481818_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 602.0
CMS3_k127_1481818_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 298.0
CMS3_k127_1481818_2 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003105 275.0
CMS3_k127_1481818_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000002194 261.0
CMS3_k127_1481818_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000003844 169.0
CMS3_k127_1481818_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000004939 101.0
CMS3_k127_1481818_6 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0034641,GO:0043170,GO:0043737,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.7 0.0000000009938 63.0
CMS3_k127_1486205_0 DnaJ molecular chaperone homology domain - - - 0.000000000003405 80.0
CMS3_k127_1486205_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0004568 49.0
CMS3_k127_1486770_0 PFAM Bacterial protein of K06915 - - 5.063e-217 684.0
CMS3_k127_1486770_1 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000000000000000000001291 180.0
CMS3_k127_1486770_2 response regulator, receiver - - - 0.00000000000000000000000000007634 131.0
CMS3_k127_1486770_3 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.000000000000000071 93.0
CMS3_k127_1486770_4 helix_turn_helix, Lux Regulon - - - 0.0000007885 61.0
CMS3_k127_1488449_0 Heat shock 70 kDa protein K04043 - - 1.108e-224 710.0
CMS3_k127_1488449_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 570.0
CMS3_k127_1488449_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 370.0
CMS3_k127_1488449_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000001744 186.0
CMS3_k127_1488449_4 response regulator, receiver - - - 0.00000000000000000000000000000000005137 147.0
CMS3_k127_1488449_5 TIGRFAM MoaD family protein K03636 - - 0.0000000000000000000000000000001909 124.0
CMS3_k127_1488449_6 Histidine kinase K00936,K02030 - 2.7.13.3 0.0000000003303 64.0
CMS3_k127_1488764_0 Methyl-accepting chemotaxis protein (MCP) signaling domain K02660,K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 346.0
CMS3_k127_1488764_1 Methyltransferase, chemotaxis proteins K00575,K02661 - 2.1.1.80 0.00000000000000000000000000000000000000000006296 171.0
CMS3_k127_1488764_2 ATP-binding region, ATPase domain protein K02487,K03407,K06596 - 2.7.13.3 0.000001146 57.0
CMS3_k127_1488826_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000681 201.0
CMS3_k127_1488826_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000001949 128.0
CMS3_k127_1488826_2 HAD-hyrolase-like K07025 - - 0.0000000000000000000004455 105.0
CMS3_k127_1495680_0 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 474.0
CMS3_k127_1495680_1 TIGRFAM Na Ca antiporter, CaCA family K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 370.0
CMS3_k127_1495680_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001131 254.0
CMS3_k127_1495680_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000001662 233.0
CMS3_k127_1495680_4 Mechanosensitive ion channel - - - 0.000000000000000000000000115 112.0
CMS3_k127_1495680_5 - - - - 0.0000000000000000000003132 103.0
CMS3_k127_1503471_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 553.0
CMS3_k127_1503471_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 391.0
CMS3_k127_1503471_2 Pyridoxal-phosphate dependent enzyme K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 374.0
CMS3_k127_1503471_3 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 322.0
CMS3_k127_1503471_4 proteolysis - - - 0.0000000000000000000000000000007991 126.0
CMS3_k127_1503471_5 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000002116 93.0
CMS3_k127_1516455_0 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 394.0
CMS3_k127_1516455_1 Phosphonate ABC transporter K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000001795 225.0
CMS3_k127_1516455_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000004498 206.0
CMS3_k127_1516455_3 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000982 192.0
CMS3_k127_1516455_4 COG2801 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000006031 137.0
CMS3_k127_1516455_5 Sh3 type 3 domain protein - - - 0.000000000000000000000000005552 115.0
CMS3_k127_1539353_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 595.0
CMS3_k127_1539353_1 dependent repressor K03709 - - 0.00000000000000000000000000001864 121.0
CMS3_k127_1539353_2 Phosphonate ABC transporter K02044 - - 0.00000000881 60.0
CMS3_k127_1544495_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.206e-194 617.0
CMS3_k127_1544495_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 419.0
CMS3_k127_1544495_2 Protein of unknown function (DUF3426) - - - 0.0000000001028 74.0
CMS3_k127_1547487_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 297.0
CMS3_k127_1547487_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001299 279.0
CMS3_k127_1557942_0 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall - - - 0.00000000000000000000000000000000000000000006184 184.0
CMS3_k127_1600579_0 SET domain K07117 - - 0.000000000000000000000000000000000001625 144.0
CMS3_k127_1600579_1 CS domain K13993 - - 0.00000000000000000000000000000001083 132.0
CMS3_k127_1600579_2 Belongs to the SprT family K02742 - - 0.00003749 53.0
CMS3_k127_1607911_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 488.0
CMS3_k127_1639261_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 589.0
CMS3_k127_1639261_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000001991 164.0
CMS3_k127_1644351_0 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 488.0
CMS3_k127_1644351_1 lipid binding K03098 - - 0.00000000000000000000000000000000000000000000000000000001514 200.0
CMS3_k127_1644351_2 - - - - 0.0000006502 61.0
CMS3_k127_1655774_0 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 301.0
CMS3_k127_1681652_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.634e-219 699.0
CMS3_k127_1681652_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 601.0
CMS3_k127_1681652_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 527.0
CMS3_k127_1681652_3 TIGRFAM NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 420.0
CMS3_k127_1681652_4 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000002131 205.0
CMS3_k127_1681652_5 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000001849 189.0
CMS3_k127_1681652_6 NAD(P)+ transhydrogenase (AB-specific) activity K00324 - 1.6.1.2 0.0000000000000000000000000000000008518 132.0
CMS3_k127_1681652_7 response regulator receiver K07696 - - 0.0000000000000000000281 98.0
CMS3_k127_1681652_8 transposition - - - 0.0001496 44.0
CMS3_k127_1717546_0 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 324.0
CMS3_k127_1717546_1 - - - - 0.00000000000000000000000000000000000000000000000000001526 194.0
CMS3_k127_1717546_2 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.000000000000000000000000000000000000000000000001044 179.0
CMS3_k127_1717884_0 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000003043 217.0
CMS3_k127_1717884_1 - - - - 0.0000000000000000000000000000000595 125.0
CMS3_k127_1717884_2 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000001724 91.0
CMS3_k127_1721092_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 488.0
CMS3_k127_1721092_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 413.0
CMS3_k127_1721092_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 378.0
CMS3_k127_1721092_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 360.0
CMS3_k127_1721092_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 352.0
CMS3_k127_1721092_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 326.0
CMS3_k127_1721092_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 288.0
CMS3_k127_1721092_7 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000002401 145.0
CMS3_k127_1721092_8 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000002962 124.0
CMS3_k127_1721092_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000001332 94.0
CMS3_k127_1731718_0 Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 584.0
CMS3_k127_1731718_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 429.0
CMS3_k127_1731718_2 tigrfam pas - - - 0.00000000000000000000000000000000000000000000000000000000000000000351 248.0
CMS3_k127_1731718_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000285 182.0
CMS3_k127_1731718_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000006937 130.0
CMS3_k127_1731718_5 Histidine kinase-like ATPase domain K07315 - 3.1.3.3 0.00000000000000000000000001983 113.0
CMS3_k127_1731718_6 transporter antisigma-factor antagonist STAS K04749 - - 0.000000000000000764 81.0
CMS3_k127_1731718_7 PFAM response regulator receiver - - - 0.0000000000000464 85.0
CMS3_k127_1731718_8 TCP-1/cpn60 chaperonin family K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000003075 52.0
CMS3_k127_1731718_9 Domain of unknown function (DUF1918) - - - 0.00005664 47.0
CMS3_k127_1734512_0 PFAM HypF finger K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 327.0
CMS3_k127_1734512_1 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 303.0
CMS3_k127_1734512_2 Hydrogenase maturation protease - - - 0.00000000000000000000000000004442 122.0
CMS3_k127_1737688_0 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007063 273.0
CMS3_k127_1737688_1 Alginate export K16081 - - 0.00000000000000000000000000000000000000001605 173.0
CMS3_k127_1737688_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000003716 143.0
CMS3_k127_1737688_3 Resolvase, N terminal domain - - - 0.0000000000000000000000000001256 124.0
CMS3_k127_1749942_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1129.0
CMS3_k127_1749942_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000332 195.0
CMS3_k127_1749942_2 Major facilitator Superfamily K03762,K12226 - - 0.0000000000000000000000000001726 117.0
CMS3_k127_1749942_3 PFAM KWG Leptospira - - - 0.0000000001675 64.0
CMS3_k127_176406_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 540.0
CMS3_k127_1776675_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008906 249.0
CMS3_k127_1776675_1 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000004336 213.0
CMS3_k127_1776675_2 MarR family transcriptional K15973 - - 0.00000000000000000000000000000000000000002153 156.0
CMS3_k127_1776675_3 PFAM transglutaminase domain protein - - - 0.00000000444 67.0
CMS3_k127_1813931_0 mechanosensitive ion channel protein MscS K16053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 454.0
CMS3_k127_1813931_1 ATP-dependent DNA helicase K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000001946 273.0
CMS3_k127_1813931_2 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.00000000000000000000000000004871 136.0
CMS3_k127_1813931_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000002838 123.0
CMS3_k127_1813931_5 Peptidase family C25 - - - 0.0001721 53.0
CMS3_k127_1846281_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 351.0
CMS3_k127_1846281_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000009917 199.0
CMS3_k127_1846281_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000004902 192.0
CMS3_k127_1846281_3 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000004908 170.0
CMS3_k127_1846281_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000004217 132.0
CMS3_k127_1846281_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000004637 125.0
CMS3_k127_1849071_0 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 576.0
CMS3_k127_1849071_1 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 506.0
CMS3_k127_1849071_2 ATPases associated with a variety of cellular activities K05833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 375.0
CMS3_k127_1849071_3 Belongs to the binding-protein-dependent transport system permease family K05832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 364.0
CMS3_k127_1849071_4 antisigma factor binding K04749,K04757 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000009679 272.0
CMS3_k127_1849071_5 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000203 257.0
CMS3_k127_1849071_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000001163 166.0
CMS3_k127_1849071_7 ABC transporter substrate binding protein - - - 0.000000000000000000000003659 107.0
CMS3_k127_1891965_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 2.855e-210 666.0
CMS3_k127_1891965_1 PFAM glycoside hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 352.0
CMS3_k127_1891965_10 phosphatase K04459,K14165 - 3.1.3.16,3.1.3.48 0.0000000000000000000000000000000000000000002261 164.0
CMS3_k127_1891965_11 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000002082 158.0
CMS3_k127_1891965_12 DNA-templated transcription, initiation K03088,K07263 - - 0.00000000000000000000000000000000000008235 150.0
CMS3_k127_1891965_13 signal sequence binding K07152 - - 0.000000000000000000000000000000008412 132.0
CMS3_k127_1891965_14 - - - - 0.00000000000000000000000000000004508 130.0
CMS3_k127_1891965_15 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000002565 134.0
CMS3_k127_1891965_16 acetyltransferase - - - 0.000000000000000000000000000001188 126.0
CMS3_k127_1891965_17 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000415 70.0
CMS3_k127_1891965_19 Putative peptidoglycan binding domain K21470 - - 0.000000000001222 76.0
CMS3_k127_1891965_2 Cytochrome c oxidase subunit K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 329.0
CMS3_k127_1891965_20 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000318 67.0
CMS3_k127_1891965_3 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 329.0
CMS3_k127_1891965_4 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 299.0
CMS3_k127_1891965_5 Pfam:DUF479 - - - 0.000000000000000000000000000000000000000000000000000000000001043 215.0
CMS3_k127_1891965_6 Enoyl-(Acyl carrier protein) reductase K00059,K18009,K19548 - 1.1.1.100,1.1.1.304,1.1.1.385,1.1.1.76 0.000000000000000000000000000000000000000000000000000000000006658 216.0
CMS3_k127_1891965_7 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000001317 198.0
CMS3_k127_1891965_8 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000002586 188.0
CMS3_k127_1891965_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000001127 189.0
CMS3_k127_1907018_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.972e-310 963.0
CMS3_k127_1907018_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 516.0
CMS3_k127_1907018_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 395.0
CMS3_k127_1907018_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001691 215.0
CMS3_k127_1907018_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000005708 213.0
CMS3_k127_1907018_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000001744 64.0
CMS3_k127_194012_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.967e-194 613.0
CMS3_k127_194012_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 529.0
CMS3_k127_194012_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 409.0
CMS3_k127_194012_3 integrase domain protein SAM domain protein K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 318.0
CMS3_k127_194012_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000004564 218.0
CMS3_k127_194012_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000007223 204.0
CMS3_k127_194012_6 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000001113 210.0
CMS3_k127_194012_7 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000001385 184.0
CMS3_k127_194012_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000818 175.0
CMS3_k127_194012_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.000000000000000000000000224 110.0
CMS3_k127_200650_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 567.0
CMS3_k127_200650_1 PFAM Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 367.0
CMS3_k127_200650_2 Belongs to the ATCase OTCase family K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 325.0
CMS3_k127_200650_3 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 316.0
CMS3_k127_200650_4 Proteasome subunit K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000006384 252.0
CMS3_k127_200650_5 Belongs to the 'phage' integrase family K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000002451 223.0
CMS3_k127_200650_6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000001164 225.0
CMS3_k127_2017448_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002399 262.0
CMS3_k127_2017448_1 Methylmuconolactone methyl-isomerase - - - 0.0000000000000000000000000000000000000000000000000000000005585 204.0
CMS3_k127_2017448_2 COG1121 ABC-type Mn Zn transport systems ATPase component K11607,K11710 - - 0.000000000000000000000000000000000000000000000000003086 190.0
CMS3_k127_2017448_3 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000001312 164.0
CMS3_k127_2017448_4 Cation transport protein K03498 - - 0.000000000000000000000000000001351 124.0
CMS3_k127_2017448_5 Iron-containing redox enzyme - - - 0.0005356 50.0
CMS3_k127_2060220_0 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004491 262.0
CMS3_k127_2060220_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000007027 210.0
CMS3_k127_2060220_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000001792 192.0
CMS3_k127_2060220_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000001986 178.0
CMS3_k127_2060220_4 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000003046 143.0
CMS3_k127_2068243_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 503.0
CMS3_k127_2068243_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000003106 231.0
CMS3_k127_2068243_2 Alginate export K16081 - - 0.00000000000000000000000000000000000000000000000000000000000008053 230.0
CMS3_k127_2068243_3 Golgi phosphoprotein 3 (GPP34) - - - 0.000000000000000000000000000000000000000000007853 170.0
CMS3_k127_2068243_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000008948 145.0
CMS3_k127_2068243_5 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000001904 124.0
CMS3_k127_2068243_6 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000001623 102.0
CMS3_k127_2068243_7 STAS domain K04749,K06378 - - 0.00000000000000000002618 94.0
CMS3_k127_2070237_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 478.0
CMS3_k127_2070237_1 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 441.0
CMS3_k127_2070237_2 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 297.0
CMS3_k127_2070237_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000312 270.0
CMS3_k127_2070237_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000002725 250.0
CMS3_k127_2070237_5 - - - - 0.00000000000000000000000000000000000000000002579 171.0
CMS3_k127_2070237_6 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000002529 162.0
CMS3_k127_2070237_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000001785 112.0
CMS3_k127_2084455_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 542.0
CMS3_k127_2084455_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 393.0
CMS3_k127_2084455_2 Dehydroquinase class II K03786 - 4.2.1.10 0.000000000000000000008517 95.0
CMS3_k127_2084455_3 - - - - 0.00000000004607 67.0
CMS3_k127_2084455_4 Tetratricopeptide repeat - - - 0.0001136 52.0
CMS3_k127_2087785_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 615.0
CMS3_k127_2087785_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 457.0
CMS3_k127_2087785_2 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000002008 121.0
CMS3_k127_2087785_3 Reverse transcriptase-like K03469,K06864 - 3.1.26.4 0.000000000000000000000000007213 114.0
CMS3_k127_2087785_4 - - - - 0.000000000002571 70.0
CMS3_k127_2087785_5 CAAX protease self-immunity K07052 - - 0.0000008465 58.0
CMS3_k127_2106709_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 455.0
CMS3_k127_2106709_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000001597 68.0
CMS3_k127_2106709_2 PFAM Transposase IS200 like K07491 - - 0.00000000007233 63.0
CMS3_k127_2109892_0 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001866 263.0
CMS3_k127_2109892_1 TIGRFAM methionine-R-sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000003447 180.0
CMS3_k127_2109892_2 Membrane protein TerC, possibly involved in tellurium resistance - - - 0.000000000000000000000000000000000000000001652 160.0
CMS3_k127_2113707_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 464.0
CMS3_k127_2113707_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 298.0
CMS3_k127_2113707_2 WxcM-like, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000001522 234.0
CMS3_k127_2113707_3 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000005355 229.0
CMS3_k127_2113707_4 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000002627 219.0
CMS3_k127_2113707_5 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000003155 216.0
CMS3_k127_2113707_6 Polysaccharide biosynthesis protein K03328 - - 0.0000000000000000000001561 112.0
CMS3_k127_2113707_7 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000006816 87.0
CMS3_k127_2133591_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 3.734e-257 824.0
CMS3_k127_2133591_1 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 346.0
CMS3_k127_2133591_2 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 335.0
CMS3_k127_2133591_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000001063 100.0
CMS3_k127_2138519_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0000166,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019318,GO:0019319,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 4.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 572.0
CMS3_k127_2138519_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 542.0
CMS3_k127_2138519_2 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.000000000000000000000000000000000000000000000000001354 184.0
CMS3_k127_2138519_3 methylamine metabolic process K15977 - - 0.000000000000000000000000000000000000000000008832 166.0
CMS3_k127_2138519_4 MarR family - - - 0.000000000000000000000000000000000000008155 149.0
CMS3_k127_2138519_5 Rhodanese Homology Domain - - - 0.0000000000000000000000002594 108.0
CMS3_k127_2152615_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 376.0
CMS3_k127_2152615_1 Beta-eliminating lyase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 330.0
CMS3_k127_2152615_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000001934 146.0
CMS3_k127_2152615_3 - - - - 0.00000001738 62.0
CMS3_k127_2152615_5 Subunit R is required for both nuclease and ATPase activities, but not for modification - - - 0.0002151 49.0
CMS3_k127_2155541_0 Rhs Family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 579.0
CMS3_k127_2155541_1 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 360.0
CMS3_k127_2155541_2 Domain of unknown function (DUF1768) K09935 - - 0.00000000000000000000000000000000000000000000000000000003785 202.0
CMS3_k127_2155541_3 Large exoproteins involved in heme utilization or adhesion K15125 - - 0.000000000002879 74.0
CMS3_k127_2155541_4 Pretoxin HINT domain - - - 0.00000000001827 72.0
CMS3_k127_2157858_0 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 436.0
CMS3_k127_2157858_1 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 338.0
CMS3_k127_2157858_2 PFAM transposase IS3 IS911 family protein K07497 - - 0.00000001488 56.0
CMS3_k127_2158071_0 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 486.0
CMS3_k127_2158071_1 acyl-CoA dehydrogenase K00248,K22430 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108,1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 396.0
CMS3_k127_2158071_10 PFAM Pentapeptide - - - 0.0000000000000006317 83.0
CMS3_k127_2158071_11 Helix-turn-helix XRE-family like proteins - - - 0.00000000007775 68.0
CMS3_k127_2158071_2 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 338.0
CMS3_k127_2158071_3 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 331.0
CMS3_k127_2158071_4 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000006085 254.0
CMS3_k127_2158071_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000001258 209.0
CMS3_k127_2158071_6 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000114 183.0
CMS3_k127_2158071_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000001486 111.0
CMS3_k127_2158071_8 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000007504 104.0
CMS3_k127_2158071_9 - - - - 0.00000000000000000000009298 104.0
CMS3_k127_2162987_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001075 273.0
CMS3_k127_2162987_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000009163 196.0
CMS3_k127_2162987_2 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000000000002675 194.0
CMS3_k127_2223248_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 2.601e-207 653.0
CMS3_k127_2223248_1 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 534.0
CMS3_k127_2223248_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00033,K00616,K01810,K08300,K13810 - 1.1.1.343,1.1.1.44,2.2.1.2,3.1.26.12,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 521.0
CMS3_k127_2223248_3 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 479.0
CMS3_k127_2223248_4 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 361.0
CMS3_k127_2223248_5 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 311.0
CMS3_k127_2223248_6 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000103 245.0
CMS3_k127_2223248_7 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000001528 169.0
CMS3_k127_2223248_8 transcriptional regulator - - - 0.000000000000000000000000000000001987 135.0
CMS3_k127_2223248_9 Domain of unknown function (DUF4149) - - - 0.0000000000000001558 85.0
CMS3_k127_2274957_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.214e-251 783.0
CMS3_k127_2274957_1 carboxylase, biotin carboxylase K01961,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 557.0
CMS3_k127_2274957_2 transmembrane transport K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 516.0
CMS3_k127_2274957_3 glutamate-tRNA ligase activity K01885,K09698 GO:0003674,GO:0003824,GO:0004812,GO:0004818,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006424,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 499.0
CMS3_k127_2274957_4 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320,K14728 - 1.5.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000026 253.0
CMS3_k127_2274957_5 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000001163 229.0
CMS3_k127_2274957_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000009819 195.0
CMS3_k127_2274957_7 carboxylase K01968 - 6.4.1.4 0.0000000000000000000002626 103.0
CMS3_k127_2274957_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000118 87.0
CMS3_k127_2274957_9 - - - - 0.000000000000611 76.0
CMS3_k127_2301769_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 384.0
CMS3_k127_2301769_1 PFAM Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 325.0
CMS3_k127_2301769_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000841 257.0
CMS3_k127_230791_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000001111 151.0
CMS3_k127_2336369_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.0 1084.0
CMS3_k127_2336369_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.195e-233 734.0
CMS3_k127_2336369_10 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000001434 214.0
CMS3_k127_2336369_11 Major facilitator Superfamily K03762,K12226 - - 0.0000000000000000000000000000000000000000000000000000001006 205.0
CMS3_k127_2336369_12 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000000000000006727 177.0
CMS3_k127_2336369_13 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000004323 181.0
CMS3_k127_2336369_14 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000001075 169.0
CMS3_k127_2336369_15 nucleic acid binding K01174 - 3.1.31.1 0.0000000000000000000000000000000000000000007935 166.0
CMS3_k127_2336369_16 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000000000004227 154.0
CMS3_k127_2336369_17 Thioredoxin K03671 - - 0.000000000000000000000000000000000000001857 149.0
CMS3_k127_2336369_18 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000009586 142.0
CMS3_k127_2336369_19 Pfam:DUF59 - - - 0.00000000000000000000000000001433 122.0
CMS3_k127_2336369_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 464.0
CMS3_k127_2336369_20 Domain of unknown function (DUF1844) - - - 0.0000000000000000000000173 102.0
CMS3_k127_2336369_21 PFAM tRNA methyltransferase complex GCD14 subunit K07442 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031515,GO:0032991,GO:0034708,GO:0043527,GO:0044424,GO:0044444,GO:0044464,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 0.0000000000000000000006205 98.0
CMS3_k127_2336369_22 Tetratricopeptide TPR_2 - - - 0.0000000000000000000008936 104.0
CMS3_k127_2336369_23 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000005954 81.0
CMS3_k127_2336369_3 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 425.0
CMS3_k127_2336369_4 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 392.0
CMS3_k127_2336369_5 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 373.0
CMS3_k127_2336369_6 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 362.0
CMS3_k127_2336369_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 334.0
CMS3_k127_2336369_8 heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005514 265.0
CMS3_k127_2336369_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000407 246.0
CMS3_k127_2407614_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 477.0
CMS3_k127_2407614_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 297.0
CMS3_k127_2422416_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 355.0
CMS3_k127_2422416_1 regulation of translation K03530 - - 0.0000000000000000000000000004236 115.0
CMS3_k127_2422416_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000003167 92.0
CMS3_k127_2422416_3 Biotin-lipoyl like K07799 - - 0.00000000000001793 85.0
CMS3_k127_2425447_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 2.373e-276 868.0
CMS3_k127_2425447_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.012e-238 753.0
CMS3_k127_2425447_2 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.197e-226 711.0
CMS3_k127_2425447_3 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000002452 258.0
CMS3_k127_2425447_4 DNA photolyase activity K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000007288 254.0
CMS3_k127_2425447_5 High-affinity Fe2 Pb2 permease K07243 - - 0.000000000000000000000000000000000000000001798 168.0
CMS3_k127_2425447_6 synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000002241 132.0
CMS3_k127_2425447_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000002413 137.0
CMS3_k127_2448297_0 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 360.0
CMS3_k127_2483011_0 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000001217 187.0
CMS3_k127_2483011_1 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000003212 171.0
CMS3_k127_2483011_2 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00001 - 1.1.1.1 0.0000000000000000000000000000000003881 134.0
CMS3_k127_2483011_3 hydrogenase expression formation protein HypE K04655 - - 0.0000004698 52.0
CMS3_k127_2490182_0 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 361.0
CMS3_k127_2490182_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000003962 183.0
CMS3_k127_2490182_2 Common central domain of tyrosinase K00505 - 1.14.18.1 0.000000000000000000000000000000006887 131.0
CMS3_k127_2490182_3 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000007344 101.0
CMS3_k127_2490182_4 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000003186 96.0
CMS3_k127_2490182_5 PFAM Tetratricopeptide repeat - - - 0.0000000000000002448 89.0
CMS3_k127_2490182_6 Phage portal protein, lambda family - - - 0.00000000000004255 78.0
CMS3_k127_2490257_0 Dehydrogenase E1 component K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0019842,GO:0022900,GO:0030312,GO:0030976,GO:0032991,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0048037,GO:0050439,GO:0050662,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 3.321e-308 971.0
CMS3_k127_2490257_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 445.0
CMS3_k127_2490257_2 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 295.0
CMS3_k127_2490257_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000001222 167.0
CMS3_k127_2490257_4 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000005367 94.0
CMS3_k127_2520526_0 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000003924 255.0
CMS3_k127_2520526_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003122 264.0
CMS3_k127_2520526_2 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.000000000000000000000000000000000000000000000000000001663 199.0
CMS3_k127_2520526_3 His Kinase A (phosphoacceptor) domain K07709 - 2.7.13.3 0.00000000000000000000000000000000000000001693 161.0
CMS3_k127_2520526_4 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000005953 134.0
CMS3_k127_2520526_5 TIGRFAM Gliding motility-associated protein, GldC - - - 0.00000000000000000000007556 102.0
CMS3_k127_2528521_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 481.0
CMS3_k127_2528521_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002334 272.0
CMS3_k127_2528521_2 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000001546 266.0
CMS3_k127_2528521_3 Type II/IV secretion system protein K02669 - - 0.0000000000001795 71.0
CMS3_k127_2528521_4 Calcium sodium proton antiporter - - - 0.0000000001269 64.0
CMS3_k127_2528521_5 histidine kinase HAMP region domain protein K07678 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.00005682 53.0
CMS3_k127_2531025_0 of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 544.0
CMS3_k127_2531025_1 COG1125 ABC-type proline glycine betaine transport systems ATPase components K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005865 279.0
CMS3_k127_2531025_2 converts alpha-aldose to the beta-anomer - - - 0.00000000000000000000000000000000000000000000000000000000000000447 222.0
CMS3_k127_2531025_3 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000006295 149.0
CMS3_k127_2531025_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000001412 136.0
CMS3_k127_253557_0 PFAM Integrase catalytic region K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 405.0
CMS3_k127_253557_1 Transposase - - - 0.0000000000000000000000000000001604 125.0
CMS3_k127_253557_2 Sulphur transport K07112 - - 0.000000000000000000001357 94.0
CMS3_k127_2542780_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 0.0 1308.0
CMS3_k127_2542780_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 567.0
CMS3_k127_2542780_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 410.0
CMS3_k127_2542780_3 Dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 330.0
CMS3_k127_2542780_4 KR domain - - - 0.000000000000000000000000000000000000000000000005626 181.0
CMS3_k127_2542780_5 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000002146 139.0
CMS3_k127_2542780_6 peroxiredoxin activity K01607 - 4.1.1.44 0.00000000005372 66.0
CMS3_k127_2556261_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.022e-320 989.0
CMS3_k127_2556261_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold K00650 - 2.3.1.43 0.000000000000000000000008757 102.0
CMS3_k127_2565594_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 314.0
CMS3_k127_2565594_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000002442 243.0
CMS3_k127_2565594_2 RDD family - - - 0.0000002121 61.0
CMS3_k127_2638585_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 549.0
CMS3_k127_2638585_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 491.0
CMS3_k127_2638585_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 379.0
CMS3_k127_2638585_3 SBF-like CPA transporter family (DUF4137) K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 301.0
CMS3_k127_2638585_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000359 289.0
CMS3_k127_2638585_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000001529 254.0
CMS3_k127_2638585_6 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000001893 179.0
CMS3_k127_2638585_7 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000001884 166.0
CMS3_k127_2638585_8 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000001128 76.0
CMS3_k127_2638585_9 EamA-like transporter family - - - 0.00000000008102 72.0
CMS3_k127_2641222_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 402.0
CMS3_k127_2641222_1 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 GO:0003674,GO:0004857,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008428,GO:0009892,GO:0009894,GO:0009895,GO:0010605,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032069,GO:0032074,GO:0043086,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1902369 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003383 250.0
CMS3_k127_2641222_2 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001638 260.0
CMS3_k127_2641222_3 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000001369 209.0
CMS3_k127_2641222_4 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000001083 167.0
CMS3_k127_2645704_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01919,K01955,K03802 - 6.3.2.2,6.3.2.29,6.3.2.30,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 392.0
CMS3_k127_2645704_1 iron ion binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 287.0
CMS3_k127_2645704_2 carboxylic acid catabolic process K01856,K19802 - 5.1.1.20,5.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003191 289.0
CMS3_k127_2645704_3 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 260.0
CMS3_k127_2645704_4 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003042 242.0
CMS3_k127_2645704_5 PFAM regulatory protein TetR K13770 - - 0.0000000000000000000000000000006303 128.0
CMS3_k127_2645704_6 - - - - 0.00000000000000001009 89.0
CMS3_k127_2645704_8 Antibiotic biosynthesis monooxygenase - - - 0.0002298 44.0
CMS3_k127_2650097_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 289.0
CMS3_k127_2650097_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000004859 266.0
CMS3_k127_2650097_2 chemotaxis protein K03406 - - 0.000004721 57.0
CMS3_k127_2672006_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 466.0
CMS3_k127_2672006_1 TIGRFAM competence damage-inducible protein CinA K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 327.0
CMS3_k127_2672006_2 PFAM type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000005315 168.0
CMS3_k127_2672006_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K13531 - 2.1.1.63 0.00000000000000000000000000000008285 130.0
CMS3_k127_2672006_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000005119 115.0
CMS3_k127_2677722_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 458.0
CMS3_k127_2677722_1 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000399 214.0
CMS3_k127_2677722_2 - - - - 0.000000000000005147 77.0
CMS3_k127_2681221_0 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 576.0
CMS3_k127_2681221_1 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 458.0
CMS3_k127_2681221_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 323.0
CMS3_k127_2681221_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 295.0
CMS3_k127_2681221_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006281 268.0
CMS3_k127_2681221_5 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000009427 222.0
CMS3_k127_2681221_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000002188 199.0
CMS3_k127_2681221_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.00000000000000000000000004675 110.0
CMS3_k127_2704175_0 Belongs to the peptidase S16 family - - - 4.765e-198 638.0
CMS3_k127_2704175_1 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 409.0
CMS3_k127_2704175_2 DeoC/LacD family aldolase K08321,K11645 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 2.3.1.245,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 359.0
CMS3_k127_2704175_3 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000001298 88.0
CMS3_k127_2712999_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 356.0
CMS3_k127_2712999_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000004996 251.0
CMS3_k127_2712999_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000001183 218.0
CMS3_k127_273016_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000001813 189.0
CMS3_k127_273016_1 PFAM Tetratricopeptide repeat - - - 0.00000000000549 73.0
CMS3_k127_273016_2 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.0000000002262 67.0
CMS3_k127_273016_3 CHAT domain - - - 0.00000003191 66.0
CMS3_k127_28264_0 Mut7-C ubiquitin K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001009 252.0
CMS3_k127_28264_1 - - - - 0.0000000000000000000000000000000000000000000138 168.0
CMS3_k127_28264_2 RNA cap guanine-N2 methyltransferase K14292 - - 0.000000000000000000000000000000000001372 146.0
CMS3_k127_28264_3 Glycine-zipper domain - - - 0.0000000000000000000000001193 111.0
CMS3_k127_2886764_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 578.0
CMS3_k127_2886764_1 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000007136 227.0
CMS3_k127_2886764_2 Rhodanese Homology Domain - - - 0.00002409 48.0
CMS3_k127_2931186_0 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 - 2.4.2.2,2.4.2.4 3.127e-197 626.0
CMS3_k127_2931186_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 542.0
CMS3_k127_2931186_2 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 374.0
CMS3_k127_2931186_3 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008489 274.0
CMS3_k127_2931186_4 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000002885 160.0
CMS3_k127_2931186_5 efflux transmembrane transporter activity K02004 - - 0.000000001377 66.0
CMS3_k127_2965248_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 567.0
CMS3_k127_2965248_1 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 372.0
CMS3_k127_2965248_2 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 355.0
CMS3_k127_2965248_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000004478 243.0
CMS3_k127_2965248_4 antisigma factor binding K04749 - - 0.000000000000000002182 89.0
CMS3_k127_2965248_5 BPTI/Kunitz family of serine protease inhibitors. - - - 0.0000000004606 70.0
CMS3_k127_2965433_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000006439 200.0
CMS3_k127_2968948_0 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000001865 219.0
CMS3_k127_2968948_1 PAP2 superfamily C-terminal - - - 0.0000000000000000000000000000000000000000000000000000002299 200.0
CMS3_k127_2968948_2 Alpha amylase, C-terminal all-beta domain - - - 0.000000000000000000000000000000007966 130.0
CMS3_k127_2968948_3 Protein conserved in bacteria K09790 - - 0.0001812 47.0
CMS3_k127_2983656_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 465.0
CMS3_k127_2983656_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001922 272.0
CMS3_k127_2983656_2 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000007429 207.0
CMS3_k127_2983656_3 Hit family K02503 - - 0.0000000000000000000000000000000000000000001902 161.0
CMS3_k127_2983656_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000003261 97.0
CMS3_k127_2988189_0 PFAM DeoC LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 560.0
CMS3_k127_2988189_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 479.0
CMS3_k127_2988189_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000004767 240.0
CMS3_k127_2988189_3 OmpA family - - - 0.000000000000000004445 96.0
CMS3_k127_2988189_4 PFAM Colicin V production protein K03558 - - 0.00000000002983 72.0
CMS3_k127_2990369_0 Belongs to the heme-copper respiratory oxidase family K00404,K15862 - 1.9.3.1 0.0 1072.0
CMS3_k127_2990369_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 4.5e-321 996.0
CMS3_k127_2990369_10 Cbb3-type cytochrome oxidase K00407 - - 0.00003569 48.0
CMS3_k127_2990369_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.812e-298 926.0
CMS3_k127_2990369_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 531.0
CMS3_k127_2990369_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 470.0
CMS3_k127_2990369_5 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 454.0
CMS3_k127_2990369_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 398.0
CMS3_k127_2990369_7 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000001107 220.0
CMS3_k127_2990369_8 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.00000000000000000000000000000000000000000000000001338 185.0
CMS3_k127_2990369_9 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000007661 55.0
CMS3_k127_3047142_0 polyphosphate kinase K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 345.0
CMS3_k127_3047142_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000001044 239.0
CMS3_k127_3047142_2 YigZ family K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000001389 186.0
CMS3_k127_3047142_3 COG1734 DnaK suppressor protein K06204 - - 0.0000000000000000000000000000005088 125.0
CMS3_k127_3047142_4 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000000000000000000000009337 116.0
CMS3_k127_3047142_5 - - - - 0.00008546 51.0
CMS3_k127_3049083_0 Conserved region in glutamate synthase - - - 3.67e-208 659.0
CMS3_k127_3049083_1 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000000000000008424 173.0
CMS3_k127_3049083_2 - - - - 0.00000000000000000000000000000000000000001246 158.0
CMS3_k127_3054374_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 525.0
CMS3_k127_3054374_1 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 405.0
CMS3_k127_3054374_2 Coenzyme F420-reducing hydrogenase, alpha subunit K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 353.0
CMS3_k127_3054374_3 2 iron, 2 sulfur cluster binding K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 352.0
CMS3_k127_3054374_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000001202 138.0
CMS3_k127_3054374_5 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000000000000000000000609 119.0
CMS3_k127_3086996_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 7.544e-220 695.0
CMS3_k127_3086996_1 Transglutaminase-like superfamily K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000243 287.0
CMS3_k127_3089284_0 Cna B domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 320.0
CMS3_k127_3089284_1 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000001144 182.0
CMS3_k127_3089284_2 Cna B domain protein - - - 0.0000000000000000000000002496 122.0
CMS3_k127_3089284_3 Serine kinase of the HPr protein, regulates carbohydrate metabolism - - - 0.000000001333 69.0
CMS3_k127_3104086_0 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006217 275.0
CMS3_k127_3104086_1 Restriction endonuclease K07448,K07449 - - 0.000000000000792 77.0
CMS3_k127_3104086_2 serine threonine protein kinase K08884,K11912 - 2.7.11.1 0.00002609 49.0
CMS3_k127_310588_0 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009314,GO:0009628,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019676,GO:0019740,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.2 2.459e-199 627.0
CMS3_k127_310588_1 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000002428 193.0
CMS3_k127_3107082_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 502.0
CMS3_k127_3107082_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 359.0
CMS3_k127_3107082_2 NAD(P)H binding domain of trans-2-enoyl-CoA reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 323.0
CMS3_k127_3107082_3 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002607 249.0
CMS3_k127_3107082_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000002834 237.0
CMS3_k127_3107082_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000003201 133.0
CMS3_k127_3107082_6 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000002038 138.0
CMS3_k127_3107082_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000005364 104.0
CMS3_k127_3107082_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000002128 93.0
CMS3_k127_3107082_9 Recombinase zinc beta ribbon domain K06400 - - 0.000005885 53.0
CMS3_k127_3112699_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 613.0
CMS3_k127_3112699_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000001377 147.0
CMS3_k127_3112699_2 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000005977 74.0
CMS3_k127_3121191_0 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00000000000000000000000000000000000000000000000000000004229 208.0
CMS3_k127_3121191_1 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000001982 79.0
CMS3_k127_3121191_2 Protein of unknown function (DUF998) - - - 0.0000000001097 70.0
CMS3_k127_3121191_3 PFAM SMP-30 Gluconolaconase - - - 0.00001174 56.0
CMS3_k127_314521_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 340.0
CMS3_k127_314521_1 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000007121 185.0
CMS3_k127_314521_2 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.0000000000000000000000003143 112.0
CMS3_k127_314521_3 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000211 65.0
CMS3_k127_3151259_0 COG2801 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 400.0
CMS3_k127_3151259_1 PFAM transposase IS3 IS911 family protein K07483 - - 0.000000000000000000000000000000000000002475 149.0
CMS3_k127_3151259_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000002529 128.0
CMS3_k127_3151259_3 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000008186 93.0
CMS3_k127_3153964_0 Involved in molybdopterin and thiamine biosynthesis, family 2 K03148,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 499.0
CMS3_k127_3153964_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 347.0
CMS3_k127_3153964_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000001607 242.0
CMS3_k127_3153964_3 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000001178 213.0
CMS3_k127_3153964_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000005696 199.0
CMS3_k127_3153964_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000006178 163.0
CMS3_k127_3153964_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000001775 132.0
CMS3_k127_3160893_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 5e-324 1027.0
CMS3_k127_3160893_1 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 366.0
CMS3_k127_3160893_10 Predicted metal-binding protein (DUF2103) - - - 0.00000000000007101 74.0
CMS3_k127_3160893_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 358.0
CMS3_k127_3160893_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 336.0
CMS3_k127_3160893_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000001046 167.0
CMS3_k127_3160893_5 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000001654 170.0
CMS3_k127_3160893_6 CYTH domain - - - 0.000000000000000000000000000000000000001259 153.0
CMS3_k127_3160893_7 AMMECR1 K09141 - - 0.0000000000000000000000000000000000003087 148.0
CMS3_k127_3160893_8 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000000000000005866 146.0
CMS3_k127_3160893_9 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000004986 123.0
CMS3_k127_3172239_0 sulfate adenylyltransferase K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 495.0
CMS3_k127_3172239_1 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 362.0
CMS3_k127_3172239_2 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 349.0
CMS3_k127_3172239_3 phosphate transporter K16331 - - 0.000000000000000000000000000000000000000000000000000000000003958 220.0
CMS3_k127_3172239_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000399 172.0
CMS3_k127_3172239_5 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity - - - 0.0000000000000000000000000000000000000000000008135 169.0
CMS3_k127_3172239_6 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000002712 92.0
CMS3_k127_3172328_0 Phage portal protein - - - 0.00000000000000000000000000000000000000000000000002465 196.0
CMS3_k127_3172328_10 PFAM Helix-turn-helix type 3 - - - 0.0000000003092 62.0
CMS3_k127_3172328_11 Phage tail tube protein - - - 0.000000002931 63.0
CMS3_k127_3172328_12 - - - - 0.000000003812 71.0
CMS3_k127_3172328_13 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000002186 65.0
CMS3_k127_3172328_14 - - - - 0.0000007406 56.0
CMS3_k127_3172328_15 Phage head-tail joining protein - - - 0.0000105 53.0
CMS3_k127_3172328_16 exo-alpha-(2->6)-sialidase activity - - - 0.0000419 57.0
CMS3_k127_3172328_2 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000001551 191.0
CMS3_k127_3172328_3 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000001511 163.0
CMS3_k127_3172328_4 Caudovirus prohead serine protease K06904 - - 0.00000000000000000000000000000002565 133.0
CMS3_k127_3172328_5 Phage gp6-like head-tail connector protein - - - 0.0000000000000000000000000004979 120.0
CMS3_k127_3172328_6 Terminase-like family - - - 0.000000000000000000003949 97.0
CMS3_k127_3172328_7 YopX protein - - - 0.00000000000000002039 87.0
CMS3_k127_3172328_9 Phage capsid family - - - 0.0000000000001162 83.0
CMS3_k127_3183455_0 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 515.0
CMS3_k127_3183455_1 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 443.0
CMS3_k127_3183455_2 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000003853 241.0
CMS3_k127_3183455_3 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000007122 183.0
CMS3_k127_3183455_4 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000000000000000000000001055 170.0
CMS3_k127_3183455_5 Transglycosylase associated protein - - - 0.00000000000000000000000000002623 118.0
CMS3_k127_3183455_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000629 93.0
CMS3_k127_3183455_7 spectrin binding K15502,K19947 - 1.14.13.225 0.0000000001199 74.0
CMS3_k127_3183455_8 Glyoxalase-like domain - - - 0.00002103 57.0
CMS3_k127_3202559_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 2.377e-280 883.0
CMS3_k127_3202559_1 1,4-alpha-glucan branching enzyme activity - - - 0.00000000000000000000000000000001356 128.0
CMS3_k127_3213675_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 1.05e-304 946.0
CMS3_k127_3213675_1 geranylgeranyl reductase activity K06444,K14257,K17830 - 1.14.19.49,1.3.1.101,1.3.7.11,5.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 441.0
CMS3_k127_3213675_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 310.0
CMS3_k127_3213675_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000002291 139.0
CMS3_k127_3213675_4 helix_turn_helix, mercury resistance - - - 0.000000000000000000000002274 107.0
CMS3_k127_3213675_5 Protein of unknown function (DUF2933) - - - 0.0000000000000000000174 93.0
CMS3_k127_3213675_6 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000504 70.0
CMS3_k127_3213675_7 - - - - 0.0001591 47.0
CMS3_k127_3229908_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000007733 147.0
CMS3_k127_3229908_1 - - - - 0.000000000000005953 86.0
CMS3_k127_3229908_2 COG2801 Transposase and inactivated derivatives - - - 0.000009263 48.0
CMS3_k127_323200_0 isomerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 313.0
CMS3_k127_323200_1 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001068 281.0
CMS3_k127_323200_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001301 285.0
CMS3_k127_323200_3 2-dehydropantoate 2-reductase activity K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000001348 252.0
CMS3_k127_323200_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000000000000000000000008875 212.0
CMS3_k127_323200_5 - - - - 0.0005006 48.0
CMS3_k127_323200_6 stress-induced-phosphoprotein 1 K04734,K09553,K16362 GO:0000003,GO:0003674,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005829,GO:0006950,GO:0007275,GO:0007568,GO:0008022,GO:0008150,GO:0008340,GO:0009266,GO:0009408,GO:0009628,GO:0010259,GO:0012505,GO:0030234,GO:0030544,GO:0031072,GO:0032501,GO:0032502,GO:0032780,GO:0032991,GO:0042030,GO:0043086,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050790,GO:0050896,GO:0051087,GO:0051336,GO:0051346,GO:0051879,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0098772,GO:0101031 - 0.0008535 47.0
CMS3_k127_3259365_0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 503.0
CMS3_k127_3259365_1 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002538 272.0
CMS3_k127_3290822_0 ABC-type transport system involved in multi-copper enzyme maturation - - - 0.00000000000000000000000000000000000000002915 162.0
CMS3_k127_3290822_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000001816 124.0
CMS3_k127_3290822_2 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000002388 125.0
CMS3_k127_3293546_0 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 377.0
CMS3_k127_3293546_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 297.0
CMS3_k127_3293546_2 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000000002166 159.0
CMS3_k127_3293546_3 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000001382 153.0
CMS3_k127_3293546_4 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000001378 151.0
CMS3_k127_3293546_5 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000005607 134.0
CMS3_k127_3293546_6 peroxiredoxin activity - - - 0.000000000000000000000000003082 118.0
CMS3_k127_3293546_7 PFAM NHL repeat containing protein - - - 0.000000000000937 81.0
CMS3_k127_3310091_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 370.0
CMS3_k127_3310091_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 296.0
CMS3_k127_3310091_2 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000584 287.0
CMS3_k127_3310091_3 FtsJ-like methyltransferase K06442 GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001118 276.0
CMS3_k127_3310091_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.00000000599 60.0
CMS3_k127_3310091_5 Peptidase family C25 - - - 0.0000005947 62.0
CMS3_k127_3315269_0 signal-transduction protein containing cAMP-binding and CBS domains K00031,K14446 - 1.1.1.42,1.3.1.85 0.0000000000000000000000000000000000000000004294 161.0
CMS3_k127_3315269_1 oxidoreductase activity - - - 0.00000000000000002564 82.0
CMS3_k127_3315269_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000417 81.0
CMS3_k127_3316472_0 Belongs to the aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 467.0
CMS3_k127_3318084_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 319.0
CMS3_k127_3318084_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 304.0
CMS3_k127_3318084_2 GAF domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000075 252.0
CMS3_k127_3318084_3 Cytochrome c - - - 0.000000000000000000000000000000000006431 143.0
CMS3_k127_3318084_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000001292 128.0
CMS3_k127_3318084_5 Universal stress protein family - - - 0.000000000000000000000000006104 121.0
CMS3_k127_3318084_6 Belongs to the universal stress protein A family - - - 0.0000000000000642 82.0
CMS3_k127_3318084_7 transcriptional regulator K22106 - - 0.00000000000007092 79.0
CMS3_k127_3318084_8 Acetyltransferase (GNAT) domain - - - 0.0005772 49.0
CMS3_k127_3338299_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 294.0
CMS3_k127_3338299_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001062 234.0
CMS3_k127_3338299_10 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000005365 56.0
CMS3_k127_3338299_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000007163 218.0
CMS3_k127_3338299_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000001374 205.0
CMS3_k127_3338299_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000193 187.0
CMS3_k127_3338299_5 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000001472 140.0
CMS3_k127_3338299_6 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000003864 120.0
CMS3_k127_3338299_7 its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000002263 114.0
CMS3_k127_3338299_8 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000007317 98.0
CMS3_k127_3338299_9 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004302 63.0
CMS3_k127_3341263_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 321.0
CMS3_k127_3341263_1 dehydrogenases and related proteins - - - 0.00000000000000000000000000000000000000000001294 174.0
CMS3_k127_3341263_2 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.0000000000000000000000000000000000000001054 154.0
CMS3_k127_3357748_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K01502 - 3.5.5.1,3.5.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 496.0
CMS3_k127_3357748_1 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002063 261.0
CMS3_k127_3357748_2 - - - - 0.0000000000000000002621 89.0
CMS3_k127_3357748_3 - - - - 0.0001697 46.0
CMS3_k127_3358498_0 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007812 284.0
CMS3_k127_3358498_1 flavin adenine dinucleotide binding K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000281 234.0
CMS3_k127_3358498_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000009658 218.0
CMS3_k127_3358498_3 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000000000000000000000000000000832 209.0
CMS3_k127_3358498_4 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000002496 123.0
CMS3_k127_3408687_0 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001709 271.0
CMS3_k127_3408687_1 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000493 242.0
CMS3_k127_3408687_2 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000002691 206.0
CMS3_k127_3408687_3 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000005144 158.0
CMS3_k127_3408687_4 - - - - 0.00005286 53.0
CMS3_k127_3453629_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000349 252.0
CMS3_k127_3453629_1 Molecular chaperone. Has ATPase activity K04079 - - 0.000000000000000000000000000000000000000000000000001276 188.0
CMS3_k127_346499_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000003332 218.0
CMS3_k127_346499_1 YHS domain - - - 0.00000000000000000000000000000000000000000000000004783 182.0
CMS3_k127_346499_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000001451 173.0
CMS3_k127_346499_3 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000000000000000000002892 107.0
CMS3_k127_346499_4 Cupin - - - 0.000000000000000000002833 101.0
CMS3_k127_3553785_0 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 2.664e-252 797.0
CMS3_k127_3553785_1 Thioredoxin-like K02199 - - 0.000000000000001168 80.0
CMS3_k127_3559096_0 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 440.0
CMS3_k127_3559096_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 286.0
CMS3_k127_3559096_2 Protein of unknown function (DUF1460) - - - 0.0000000000000000000000000000000000000000000000000000000000000003033 229.0
CMS3_k127_3559096_3 histidine kinase, HAMP - - - 0.000000000000000000000000000000000000000000000000000000000000003869 228.0
CMS3_k127_3559096_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000004991 183.0
CMS3_k127_3572765_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.084e-246 777.0
CMS3_k127_3572765_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 461.0
CMS3_k127_3572765_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 276.0
CMS3_k127_3572765_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000381 243.0
CMS3_k127_3572765_4 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000009066 236.0
CMS3_k127_3572765_5 COG NOG13916 non supervised orthologous group - - - 0.0000000000000000000000000000000000000002171 153.0
CMS3_k127_3572765_6 PFAM cyclic-AMP phosphodiesterase class-II K01120 - 3.1.4.17 0.000000000000000000000008838 105.0
CMS3_k127_3572765_7 nuclease activity K06218 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0006139,GO:0006355,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0034641,GO:0034655,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000002084 102.0
CMS3_k127_3572765_8 - - - - 0.00000000000000000000002529 100.0
CMS3_k127_358107_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 305.0
CMS3_k127_358107_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002046 271.0
CMS3_k127_358107_2 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0060255,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000002757 207.0
CMS3_k127_358107_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.0000000000000000000000000000000000000000005105 163.0
CMS3_k127_358107_4 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000002706 117.0
CMS3_k127_358576_0 COG0189 Glutathione synthase Ribosomal protein S6 modification K05844 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 487.0
CMS3_k127_358576_1 PFAM Succinylglutamate desuccinylase Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 345.0
CMS3_k127_358576_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000115 229.0
CMS3_k127_358576_3 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000000002665 151.0
CMS3_k127_358576_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000152 151.0
CMS3_k127_358576_5 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000323 131.0
CMS3_k127_3620262_0 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 441.0
CMS3_k127_3620262_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 326.0
CMS3_k127_3620262_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000002468 228.0
CMS3_k127_3620262_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000009292 208.0
CMS3_k127_3620262_4 Lysin motif - - - 0.00000000000000000000000000000000002421 140.0
CMS3_k127_3620262_5 tRNA (guanine-N7-)-methyltransferase activity K02493,K02527,K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000008387 129.0
CMS3_k127_3625417_0 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000464 205.0
CMS3_k127_3625417_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000003717 171.0
CMS3_k127_3629345_0 LysM domain K08307,K12204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000193 272.0
CMS3_k127_3629345_1 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000002842 254.0
CMS3_k127_3629345_2 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.0000000000000000000000000000000001706 140.0
CMS3_k127_3629345_3 Outer membrane efflux protein - - - 0.00000000000000000000004473 106.0
CMS3_k127_3661001_0 TPR repeat-containing protein - - - 0.000000000008962 70.0
CMS3_k127_3684141_0 Methylase involved in ubiquinone menaquinone K07755 - 2.1.1.137 6.114e-281 882.0
CMS3_k127_3684141_1 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000000000001368 166.0
CMS3_k127_3684141_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000292 117.0
CMS3_k127_3684141_4 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000005712 57.0
CMS3_k127_3761390_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 382.0
CMS3_k127_3761390_1 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000001022 181.0
CMS3_k127_3761390_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000008167 81.0
CMS3_k127_3761390_3 - - - - 0.000001383 55.0
CMS3_k127_3781813_0 Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001019 292.0
CMS3_k127_3781813_1 - - - - 0.00000000773 60.0
CMS3_k127_3785753_0 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 347.0
CMS3_k127_3791353_0 ABC-type multidrug transport system ATPase and permease K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 602.0
CMS3_k127_3791353_1 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 352.0
CMS3_k127_3791353_2 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 345.0
CMS3_k127_3791353_3 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 336.0
CMS3_k127_3791353_4 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 294.0
CMS3_k127_3791353_5 PFAM Glycosyl transferases group 1 K16703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001007 279.0
CMS3_k127_3791353_6 PFAM Glycosyl transferases group 1 K16703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002677 268.0
CMS3_k127_3791353_7 Phosphotransferase enzyme family - - - 0.00000000000000000000000000004104 129.0
CMS3_k127_3791353_8 Family of unknown function (DUF5335) - - - 0.00000009913 58.0
CMS3_k127_3808819_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 334.0
CMS3_k127_3808819_1 Sodium:solute symporter family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004876 311.0
CMS3_k127_3808819_2 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000001238 207.0
CMS3_k127_3808819_3 PFAM CBS domain - - - 0.0000000000000000006438 91.0
CMS3_k127_3808819_4 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0002493 52.0
CMS3_k127_3846234_0 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 417.0
CMS3_k127_3846234_1 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 410.0
CMS3_k127_3846234_10 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000000003748 101.0
CMS3_k127_3846234_11 Uncharacterized protein conserved in bacteria (DUF2059) - - - 0.000000002622 68.0
CMS3_k127_3846234_12 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00008953 53.0
CMS3_k127_3846234_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 311.0
CMS3_k127_3846234_3 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005518 297.0
CMS3_k127_3846234_4 Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000000000000000000000722 220.0
CMS3_k127_3846234_5 Membrane bound O-acyl transferase family - - - 0.00000000000000000000000000000000000000000000000000008515 197.0
CMS3_k127_3846234_6 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000007446 179.0
CMS3_k127_3846234_7 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000001143 160.0
CMS3_k127_3846234_8 oxygen carrier activity K07216 - - 0.000000000000000000000000002746 115.0
CMS3_k127_3846234_9 - - - - 0.00000000000000000000000321 106.0
CMS3_k127_3855839_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 434.0
CMS3_k127_3855839_1 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001112 238.0
CMS3_k127_3864100_0 Hsp70 protein K04043 - - 1.71e-220 696.0
CMS3_k127_3864100_1 Elongation factor Tu domain 2 K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 615.0
CMS3_k127_3864100_2 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000216 201.0
CMS3_k127_3864100_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000001627 150.0
CMS3_k127_3864100_4 Binds the 23S rRNA K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000003633 99.0
CMS3_k127_3883249_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 297.0
CMS3_k127_3883249_1 cellulose binding K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000008932 236.0
CMS3_k127_3883249_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000001058 206.0
CMS3_k127_3883249_3 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000004871 199.0
CMS3_k127_3883249_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000757 181.0
CMS3_k127_3883249_5 K -dependent Na Ca exchanger K07301 - - 0.000000000000000000000000000000000000000039 159.0
CMS3_k127_3883249_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000002442 145.0
CMS3_k127_3883249_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000002774 139.0
CMS3_k127_3883249_8 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000002547 117.0
CMS3_k127_3883249_9 Forkhead associated domain - - - 0.00000000008827 71.0
CMS3_k127_3933963_0 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 337.0
CMS3_k127_3933963_1 CHAD domain - - - 0.0000000000000000000000000000000000000000000000719 183.0
CMS3_k127_3935336_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 334.0
CMS3_k127_3935336_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 297.0
CMS3_k127_3935336_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 285.0
CMS3_k127_3935336_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000002506 262.0
CMS3_k127_3952666_0 Phage-related minor tail protein - - - 0.0000000000000000000000000007645 132.0
CMS3_k127_40070_0 Binding-protein-dependent transport system inner membrane component - - - 5.998e-220 707.0
CMS3_k127_40070_1 phosphate transport system permease protein K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 602.0
CMS3_k127_40070_2 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 415.0
CMS3_k127_40070_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000006908 83.0
CMS3_k127_4068277_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 401.0
CMS3_k127_4068277_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 303.0
CMS3_k127_4068277_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000008046 237.0
CMS3_k127_4068277_3 Stress responsive A B barrel domain protein - - - 0.0000000000000000000000000000001481 125.0
CMS3_k127_4068277_4 methyltransferase activity - - - 0.00000000000000000004452 96.0
CMS3_k127_4077755_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 527.0
CMS3_k127_4077755_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 287.0
CMS3_k127_4077755_2 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002781 290.0
CMS3_k127_4099583_0 COGs COG0076 Glutamate decarboxylase and related PLP-dependent protein K01634 - 4.1.2.27 5.093e-234 730.0
CMS3_k127_4099583_1 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 482.0
CMS3_k127_4099583_2 transporter K07238,K11021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005599 248.0
CMS3_k127_4099583_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000007997 188.0
CMS3_k127_4122772_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 395.0
CMS3_k127_4122772_1 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 295.0
CMS3_k127_4122772_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007652 241.0
CMS3_k127_4122772_3 PFAM Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000000000000001473 158.0
CMS3_k127_4122772_4 homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.0000000000000000000000000000000000004065 143.0
CMS3_k127_4122772_5 - - - - 0.00000000000002532 84.0
CMS3_k127_4122772_6 CDGSH-type zinc finger. Function unknown. - - - 0.00000000001268 65.0
CMS3_k127_4132966_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 513.0
CMS3_k127_4132966_1 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000005808 236.0
CMS3_k127_4132966_2 Haloacid dehalogenase-like hydrolase K01101 - 3.1.3.41 0.00000000000000000000000000000000000000000000767 173.0
CMS3_k127_4132966_3 Alpha beta hydrolase K00433,K01055 - 1.11.1.10,3.1.1.24 0.0000000000000000000000000000000007509 135.0
CMS3_k127_4176206_0 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1203.0
CMS3_k127_4176206_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 296.0
CMS3_k127_4176206_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000002163 211.0
CMS3_k127_4176206_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000003821 181.0
CMS3_k127_4176206_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000002729 158.0
CMS3_k127_4176206_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000005189 136.0
CMS3_k127_4197519_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1069.0
CMS3_k127_4197519_1 oxidoreductases (related to aryl-alcohol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 319.0
CMS3_k127_4197519_2 PFAM Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000298 288.0
CMS3_k127_4197519_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000006421 233.0
CMS3_k127_4197519_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000002624 209.0
CMS3_k127_4197519_5 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000005315 168.0
CMS3_k127_422702_0 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 340.0
CMS3_k127_422702_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000003262 155.0
CMS3_k127_422702_2 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins - - - 0.00003167 49.0
CMS3_k127_4232488_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 412.0
CMS3_k127_4232488_1 Tetratricopeptide repeat - - - 0.0000000000000000000000001919 111.0
CMS3_k127_4232488_2 Glycosyl transferases group 1 - - - 0.00000000000000000000008626 108.0
CMS3_k127_4235819_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1214.0
CMS3_k127_4235819_1 COG0474 Cation transport ATPase K01537 - 3.6.3.8 1.294e-211 674.0
CMS3_k127_4235819_2 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.549e-194 613.0
CMS3_k127_4235819_3 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 616.0
CMS3_k127_4235819_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 526.0
CMS3_k127_4235819_5 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009584 522.0
CMS3_k127_4235819_6 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 500.0
CMS3_k127_4235819_7 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 415.0
CMS3_k127_4235819_8 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 312.0
CMS3_k127_4235819_9 Sodium/hydrogen exchanger family - - - 0.00000000000000000007857 92.0
CMS3_k127_424520_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1474.0
CMS3_k127_424520_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 589.0
CMS3_k127_424520_10 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000009426 183.0
CMS3_k127_424520_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000102 181.0
CMS3_k127_424520_12 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000001075 181.0
CMS3_k127_424520_13 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000005455 163.0
CMS3_k127_424520_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000002592 162.0
CMS3_k127_424520_15 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000002933 152.0
CMS3_k127_424520_16 glyoxalase III activity - - - 0.0000000000000000000000000000000007151 136.0
CMS3_k127_424520_17 chain release factor K15034 - - 0.000000000000000000000000000000005302 132.0
CMS3_k127_424520_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 534.0
CMS3_k127_424520_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
CMS3_k127_424520_4 Involved in the biosynthesis of branched-chain polyamines, which support the growth of thermophiles under high- temperature conditions. Catalyzes the sequential condensation of spermidine with the aminopropyl groups of decarboxylated S- adenosylmethionines to produce N(4)-bis(aminopropyl)spermidine via N(4)-aminopropylspermidine K07057 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.5.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 350.0
CMS3_k127_424520_5 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 312.0
CMS3_k127_424520_6 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001515 270.0
CMS3_k127_424520_7 COG0656 Aldo keto reductases, related to diketogulonate reductase K06222 - 1.1.1.346 0.00000000000000000000000000000000000000000000000000000000000000024 229.0
CMS3_k127_424520_8 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000004492 197.0
CMS3_k127_424520_9 Butirosin biosynthesis protein H, N-terminal - - - 0.0000000000000000000000000000000000000000000000000003886 198.0
CMS3_k127_4257863_0 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 357.0
CMS3_k127_4257863_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 299.0
CMS3_k127_4257863_2 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004414 226.0
CMS3_k127_4257863_3 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000001849 90.0
CMS3_k127_4259572_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 419.0
CMS3_k127_4259572_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 333.0
CMS3_k127_4259572_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007797 276.0
CMS3_k127_4259572_3 Inositol monophosphatase K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000002264 258.0
CMS3_k127_4259572_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000001683 226.0
CMS3_k127_4259572_5 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000002392 168.0
CMS3_k127_4259572_6 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000001322 153.0
CMS3_k127_4259572_7 helix_turn_helix, mercury resistance - - - 0.00000000000000000000003241 102.0
CMS3_k127_4270017_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 4.04e-201 634.0
CMS3_k127_4270017_1 Inner membrane component of T3SS, cytoplasmic domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.0000000001686 70.0
CMS3_k127_4270936_1 transcriptional regulator - - - 0.000009455 53.0
CMS3_k127_4271230_0 gamma-glutamylcyclotransferase activity - - - 0.00000000000000000000000000000004069 130.0
CMS3_k127_4271230_1 PFAM PspC domain K03973 - - 0.0000000000001108 72.0
CMS3_k127_4279025_0 Nitrous oxide reductase K00376 - 1.7.2.4 5.695e-292 909.0
CMS3_k127_4279025_1 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 358.0
CMS3_k127_4279025_2 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004003 275.0
CMS3_k127_4279025_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K07218 - - 0.00000000000000000000000000000000000000000000000000000003113 207.0
CMS3_k127_4279025_4 - K19341 - - 0.0000000000000000000000000000000000000000000000000000001629 205.0
CMS3_k127_4279025_5 NosL K19342 - - 0.0000000000000000000005407 100.0
CMS3_k127_4279025_6 Cytochrome C oxidase, cbb3-type, subunit III K02305 - - 0.00000000000000000001162 96.0
CMS3_k127_4279025_7 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.0000168 52.0
CMS3_k127_4279967_0 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 332.0
CMS3_k127_4279967_1 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000204 225.0
CMS3_k127_4279967_2 sirohydrochlorin cobaltochelatase activity K03794 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016829,GO:0018130,GO:0019354,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046156,GO:0046483,GO:0048037,GO:0050896,GO:0051186,GO:0051188,GO:0051266,GO:0051536,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.4 0.000000000000000000000000000001427 124.0
CMS3_k127_4279967_3 Hydrolase K07025 - - 0.00000000000000004569 90.0
CMS3_k127_4279967_4 - - - - 0.00009032 53.0
CMS3_k127_4281236_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 559.0
CMS3_k127_4281236_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000000001199 181.0
CMS3_k127_4281236_2 DnaJ molecular chaperone homology domain - - - 0.00000001934 63.0
CMS3_k127_4281922_0 Belongs to the peptidase M16 family K07263 - - 1.92e-211 686.0
CMS3_k127_4281922_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 359.0
CMS3_k127_4281922_2 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000003681 174.0
CMS3_k127_4281922_3 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000002084 171.0
CMS3_k127_4293458_0 glucan 1,4-alpha-glucosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 514.0
CMS3_k127_4293458_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000002039 209.0
CMS3_k127_4293458_2 Pas domain - - - 0.00000000000000000000000000000000000000009997 162.0
CMS3_k127_4297849_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 500.0
CMS3_k127_4297849_1 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000006367 187.0
CMS3_k127_4297849_2 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000001188 154.0
CMS3_k127_4297849_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000001347 147.0
CMS3_k127_4297849_4 TonB C terminal K03832 - - 0.000000000000000000002364 105.0
CMS3_k127_4297849_5 RNA polymerase sigma factor K03088 - - 0.0000000904 54.0
CMS3_k127_4297849_6 PilZ domain - - - 0.00004781 50.0
CMS3_k127_4303433_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001059 258.0
CMS3_k127_4303433_1 Universal bacterial protein YeaZ K14742 - - 0.00000000000000000000000000000000000000002592 160.0
CMS3_k127_4303433_2 acetolactate synthase large subunit K01652 - 2.2.1.6 0.000000000000000000000002002 104.0
CMS3_k127_4303433_3 Protein of unknown function (DUF465) K09794 - - 0.00005622 48.0
CMS3_k127_4304831_0 PFAM transposase IS3 IS911 family protein K07497 - - 0.000000000000000000000001468 103.0
CMS3_k127_4304831_1 PFAM transposase IS3 IS911 family protein K07497 - - 0.000000006951 56.0
CMS3_k127_4314667_0 Related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 345.0
CMS3_k127_4314667_1 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000001016 208.0
CMS3_k127_4314667_2 Winged helix DNA-binding domain - - - 0.0000000000000000000000000003889 121.0
CMS3_k127_4314667_3 - - - - 0.00000000000009379 83.0
CMS3_k127_4314667_4 Putative diguanylate phosphodiesterase - - - 0.0000000000001704 74.0
CMS3_k127_4319555_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000002062 113.0
CMS3_k127_4319555_1 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000001527 116.0
CMS3_k127_4319555_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000006017 107.0
CMS3_k127_4323580_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 526.0
CMS3_k127_4323580_1 OmpA family K03640 - - 0.000000000000000000000001051 112.0
CMS3_k127_4323580_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000001039 107.0
CMS3_k127_4323580_3 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000002597 103.0
CMS3_k127_4323580_4 Histidine kinase - - - 0.0000000000000982 72.0
CMS3_k127_4323580_5 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000006379 50.0
CMS3_k127_4324389_0 UDP-glucose 4-epimerase activity K01784,K17947 - 5.1.3.2,5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 343.0
CMS3_k127_4324389_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000004859 236.0
CMS3_k127_4324389_10 - - - - 0.00003529 49.0
CMS3_k127_4324389_11 Short C-terminal domain K08982 - - 0.0004391 44.0
CMS3_k127_4324389_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000001279 201.0
CMS3_k127_4324389_3 COG3451 Type IV secretory pathway, VirB4 components - - - 0.00000000000000000000000000000000000000008389 167.0
CMS3_k127_4324389_4 Belongs to the UPF0758 family - - - 0.0000000000000000000000000000001218 133.0
CMS3_k127_4324389_5 - - - - 0.000000000000000000000002171 106.0
CMS3_k127_4324389_6 - - - - 0.000000000000000000000006346 109.0
CMS3_k127_4324389_7 lipoprotein biosynthetic process K13292 - - 0.0000000000000000008694 91.0
CMS3_k127_4324389_8 Phage integrase family - - - 0.00000000000000007733 93.0
CMS3_k127_4325967_0 neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 399.0
CMS3_k127_4342294_0 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000004675 201.0
CMS3_k127_4342294_1 YicC-like family, N-terminal region K03316 - - 0.0000000000000000000000000000000000000000000000000000001459 205.0
CMS3_k127_4342294_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000004421 185.0
CMS3_k127_4342294_3 Domain of unknown function (DUF4416) - - - 0.000000000000000000000000000000000000302 145.0
CMS3_k127_4342294_4 Gram-negative-bacterium-type cell wall biogenesis - - - 0.0000000000000000000000000000000001324 140.0
CMS3_k127_4342294_5 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000002235 81.0
CMS3_k127_4342294_6 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000006527 69.0
CMS3_k127_4342294_7 lipolytic protein G-D-S-L family - - - 0.00006738 54.0
CMS3_k127_4342294_8 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0002065 44.0
CMS3_k127_4343251_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 420.0
CMS3_k127_4343251_1 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 293.0
CMS3_k127_4343251_2 coproporphyrinogen oxidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002187 278.0
CMS3_k127_4343251_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000001104 118.0
CMS3_k127_4343251_4 Protein conserved in bacteria K09986 - - 0.0000000000000000000005846 100.0
CMS3_k127_4343251_5 Belongs to the UPF0434 family K09791 - - 0.000000000000000005056 85.0
CMS3_k127_439451_0 Carbamoyltransferase C-terminus K00612 - - 5.85e-263 821.0
CMS3_k127_439451_1 lipolytic protein G-D-S-L family - - - 0.000000000000000003461 96.0
CMS3_k127_439451_2 - - - - 0.0000000000517 64.0
CMS3_k127_4445641_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 453.0
CMS3_k127_4445641_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 351.0
CMS3_k127_4445641_2 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000002964 227.0
CMS3_k127_4445641_3 UbiA prenyltransferase family - - - 0.00000000000000000000003818 109.0
CMS3_k127_4445641_4 domain, Protein - - - 0.0000000005507 70.0
CMS3_k127_4445641_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000008741 49.0
CMS3_k127_4445680_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 488.0
CMS3_k127_4445680_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 459.0
CMS3_k127_4445680_2 O-methyltransferase - - - 0.0000000001592 63.0
CMS3_k127_4466348_0 calcium- and calmodulin-responsive adenylate cyclase activity K13735,K20276,K21449 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 371.0
CMS3_k127_4466348_1 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000001161 260.0
CMS3_k127_4476137_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000001611 198.0
CMS3_k127_4476137_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000002972 156.0
CMS3_k127_4476137_2 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000001724 141.0
CMS3_k127_4476137_3 NUDIX domain - - - 0.000000001121 63.0
CMS3_k127_4482204_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 386.0
CMS3_k127_4482204_1 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 293.0
CMS3_k127_4482204_2 - - - - 0.000000000000000001799 94.0
CMS3_k127_4503904_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1082.0
CMS3_k127_4503904_1 peptidase U62 modulator of DNA gyrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 467.0
CMS3_k127_4503904_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000002502 217.0
CMS3_k127_4503904_3 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000001503 168.0
CMS3_k127_4503904_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000003723 91.0
CMS3_k127_4503904_5 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.00000000009764 71.0
CMS3_k127_4510578_0 Proposed homoserine kinase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 297.0
CMS3_k127_4510578_1 Phosphoribosyl-ATP pyrophosphohydrolase K02499 - - 0.0000000000000000000000000000000000000000000000000000000000000000004336 237.0
CMS3_k127_4510578_2 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000006773 123.0
CMS3_k127_4510578_3 membrane-bound metal-dependent K07038 - - 0.0000000000000000000000000009028 124.0
CMS3_k127_4538480_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 486.0
CMS3_k127_4538480_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 433.0
CMS3_k127_4538480_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 296.0
CMS3_k127_4538480_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000001446 156.0
CMS3_k127_4538480_4 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000001611 121.0
CMS3_k127_4538480_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000001461 121.0
CMS3_k127_4538480_6 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000006967 109.0
CMS3_k127_4538480_7 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000132 102.0
CMS3_k127_4538480_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000001489 100.0
CMS3_k127_4538480_9 Protein of unknown function (DUF2892) - - - 0.00000000000000001867 84.0
CMS3_k127_4552838_0 PFAM AAA ATPase central domain protein K06027 - 3.6.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 421.0
CMS3_k127_4552838_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000171 172.0
CMS3_k127_4574730_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001294 267.0
CMS3_k127_4574730_1 Cysteine-rich secretory protein family - - - 0.0000003519 59.0
CMS3_k127_4576225_0 Phosphonate ABC transporter K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 355.0
CMS3_k127_4576225_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 GO:0006810,GO:0008150,GO:0015716,GO:0051179,GO:0051234,GO:0071702 3.6.3.28 0.00000000000000000000000000000000000000000000000000002291 198.0
CMS3_k127_4576225_2 Binding-protein-dependent transport system inner membrane component K02042 - - 0.0000002747 55.0
CMS3_k127_4577223_0 KR domain K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000001412 211.0
CMS3_k127_4577223_1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000005752 128.0
CMS3_k127_4577223_2 Dihydroneopterin aldolase K07589 - 5.1.99.7 0.000000000000000000000000000003885 122.0
CMS3_k127_4577223_3 Peptidase family M50 - - - 0.000000000000007913 76.0
CMS3_k127_4592781_0 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 548.0
CMS3_k127_4592781_1 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000055 233.0
CMS3_k127_4592781_2 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000164 159.0
CMS3_k127_4592781_3 Fumarylacetoacetate (FAA) hydrolase family K02554 - 4.2.1.80 0.000000000000000000000000000000003504 139.0
CMS3_k127_4592781_4 DDE superfamily endonuclease - - - 0.000000000000000000000002463 108.0
CMS3_k127_4592781_5 Major Facilitator - - - 0.0000000000000001721 81.0
CMS3_k127_4592781_6 Binding-protein-dependent transport system inner membrane component K15771 - - 0.0004488 47.0
CMS3_k127_4599259_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 461.0
CMS3_k127_4599259_1 Aminotransferase K10206,K14261 GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 348.0
CMS3_k127_4599259_2 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 308.0
CMS3_k127_4599259_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000006958 225.0
CMS3_k127_4599259_4 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000008877 148.0
CMS3_k127_4599259_5 Protein conserved in bacteria K09800 - - 0.00000000000000000000000000000000004799 156.0
CMS3_k127_4599259_6 cheY-homologous receiver domain K02657 - - 0.0000000000000000000000000000000001845 152.0
CMS3_k127_4599259_7 Two component signalling adaptor domain K03408 - - 0.000000000000000000000001074 113.0
CMS3_k127_4602606_0 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.0 1686.0
CMS3_k127_4602606_1 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 542.0
CMS3_k127_4602606_2 TfoX N-terminal domain - - - 0.000000000000000000000000000001002 124.0
CMS3_k127_4602606_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05524 - - 0.00002073 48.0
CMS3_k127_4618506_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 285.0
CMS3_k127_4618506_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000009649 212.0
CMS3_k127_4618506_3 Domain of Unknown Function with PDB structure (DUF3850) - - - 0.000000000000009408 81.0
CMS3_k127_4618506_4 Protein of unknown function (DUF1353) - - - 0.0000000002221 66.0
CMS3_k127_4618506_6 Von Willebrand factor type A domain K07114 - - 0.000008388 56.0
CMS3_k127_4618506_7 COG NOG08810 non supervised orthologous group - - - 0.00001543 51.0
CMS3_k127_464835_0 PFAM glucose-methanol-choline oxidoreductase K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 383.0
CMS3_k127_464835_1 Gluconate 2-dehydrogenase subunit 3 - - - 0.00004862 52.0
CMS3_k127_4659703_0 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 389.0
CMS3_k127_4659703_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000009675 218.0
CMS3_k127_4659703_2 Tetratricopeptide repeat - - - 0.00000000005532 74.0
CMS3_k127_4661607_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 567.0
CMS3_k127_4661607_1 Nitrite and sulphite reductase 4Fe-4S domain K00392 - 1.8.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 481.0
CMS3_k127_4661607_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 310.0
CMS3_k127_4661607_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000002477 218.0
CMS3_k127_4661607_4 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000002811 167.0
CMS3_k127_4661607_5 Rdx family K07401 - - 0.00000000000000000000000000000000005871 135.0
CMS3_k127_4661607_6 Cupin 2, conserved barrel domain protein K19547 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897 5.3.3.19 0.00000000000000003124 87.0
CMS3_k127_4691917_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 536.0
CMS3_k127_4691917_1 Catechol dioxygenase N terminus K04098 - 1.13.11.37 0.0000000003501 66.0
CMS3_k127_4692045_0 Putative modulator of DNA gyrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 323.0
CMS3_k127_4692045_1 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008907 261.0
CMS3_k127_4692045_2 TonB-dependent Receptor Plug K02014,K16089 - - 0.000000000000000000000000000000000000000000009128 184.0
CMS3_k127_4692045_3 proteolysis K19225 - 3.4.21.105 0.00000000000000000000003911 112.0
CMS3_k127_4692045_4 Periplasmic binding protein K02016 - - 0.000000000000000005796 89.0
CMS3_k127_4692045_5 Lactonase, 7-bladed beta-propeller K07004 - - 0.0000000000000000263 96.0
CMS3_k127_4722218_0 Heat shock 70 kDa protein K04043 - - 2.729e-289 899.0
CMS3_k127_4722218_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 421.0
CMS3_k127_4722218_2 TPM domain K06872 - - 0.00000000000000000000001268 103.0
CMS3_k127_4722218_3 D-ala D-ala ligase N-terminus K01921,K18856 - 6.3.2.35,6.3.2.4 0.0000000000000000000001419 102.0
CMS3_k127_4722218_4 Putative regulatory protein - - - 0.0000001395 55.0
CMS3_k127_4738673_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 623.0
CMS3_k127_4738673_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 589.0
CMS3_k127_4739803_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.493e-266 839.0
CMS3_k127_4739803_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 603.0
CMS3_k127_4739803_2 epimerase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005524 263.0
CMS3_k127_4739803_3 helix_turn_helix, mercury resistance K22491 - - 0.00000000000000000000000000000000000000000000000000000000000002259 226.0
CMS3_k127_4739803_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000006514 213.0
CMS3_k127_4739803_5 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000537 93.0
CMS3_k127_4788805_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 9.186e-244 769.0
CMS3_k127_4788805_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 366.0
CMS3_k127_4788805_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000001134 184.0
CMS3_k127_4788805_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000001315 150.0
CMS3_k127_4788805_4 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000001446 140.0
CMS3_k127_4788805_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000005553 64.0
CMS3_k127_4789604_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 453.0
CMS3_k127_4789604_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 292.0
CMS3_k127_4789604_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000000000000000000001988 139.0
CMS3_k127_4789604_3 - - - - 0.0000000000000000000000000000001859 123.0
CMS3_k127_4789604_4 light absorption - - - 0.000000000000000000000000000004136 123.0
CMS3_k127_4789604_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000000000001009 106.0
CMS3_k127_4792554_0 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 560.0
CMS3_k127_4792554_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000001485 259.0
CMS3_k127_4792554_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000008927 131.0
CMS3_k127_4792554_3 HNH nucleases - - - 0.000000000000000000000006439 103.0
CMS3_k127_4792554_4 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000002517 66.0
CMS3_k127_4798042_0 FAD linked oxidases, C-terminal domain - - - 0.0 1069.0
CMS3_k127_4798042_1 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 0.0 1015.0
CMS3_k127_4798042_10 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000705 138.0
CMS3_k127_4798042_11 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000000000000000001507 129.0
CMS3_k127_4798042_12 Malate synthase K01638 - 2.3.3.9 0.000000000000000000000004144 102.0
CMS3_k127_4798042_13 COG0784 FOG CheY-like receiver K02658 - - 0.000000000000002943 80.0
CMS3_k127_4798042_14 POTRA domain, FtsQ-type K03589 - - 0.0000000003446 69.0
CMS3_k127_4798042_15 - - - - 0.0001391 53.0
CMS3_k127_4798042_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 511.0
CMS3_k127_4798042_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 467.0
CMS3_k127_4798042_4 PFAM thiamine pyrophosphate protein domain protein TPP-binding K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 419.0
CMS3_k127_4798042_5 agmatine deiminase activity K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 402.0
CMS3_k127_4798042_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 390.0
CMS3_k127_4798042_7 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 366.0
CMS3_k127_4798042_8 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000006238 220.0
CMS3_k127_4798042_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000116 169.0
CMS3_k127_4834661_0 iron-sulfur cluster assembly K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.31e-257 799.0
CMS3_k127_4834661_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008204 484.0
CMS3_k127_4834661_2 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 395.0
CMS3_k127_4834661_3 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 355.0
CMS3_k127_4834661_4 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000000000000000000000298 158.0
CMS3_k127_4834661_5 protein conserved in bacteria containing thioredoxin-like domain - - - 0.000000000000000000000007088 108.0
CMS3_k127_4834661_6 AsnC-type helix-turn-helix domain K05710 - - 0.0000000000000000000001674 100.0
CMS3_k127_4834661_7 Transcriptional regulator - - - 0.000000000000000003213 89.0
CMS3_k127_4852808_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000002668 243.0
CMS3_k127_4852808_1 dihydropteroate synthase K00796 - 2.5.1.15 0.00000006238 55.0
CMS3_k127_4852808_2 YbbR-like protein - - - 0.0001453 51.0
CMS3_k127_4857382_0 General secretory system II, protein E domain protein K02652 - - 2.907e-209 665.0
CMS3_k127_4857382_1 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 569.0
CMS3_k127_4857382_10 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.0000001226 54.0
CMS3_k127_4857382_2 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 509.0
CMS3_k127_4857382_3 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 490.0
CMS3_k127_4857382_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 498.0
CMS3_k127_4857382_5 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 405.0
CMS3_k127_4857382_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009821 250.0
CMS3_k127_4857382_7 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000003955 246.0
CMS3_k127_4857382_8 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.000000000000000000000000000000000000000000001085 170.0
CMS3_k127_4857382_9 - - - - 0.000000000000000000000000000000000008643 151.0
CMS3_k127_4858288_0 PFAM Dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 298.0
CMS3_k127_4858288_2 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000014 193.0
CMS3_k127_4858288_3 ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000001116 165.0
CMS3_k127_4858961_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 2.162e-263 820.0
CMS3_k127_4858961_1 helicase - - - 0.0002601 52.0
CMS3_k127_4862618_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.495e-222 701.0
CMS3_k127_4862618_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 321.0
CMS3_k127_4862618_2 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000003288 239.0
CMS3_k127_4862618_3 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000005225 244.0
CMS3_k127_4862618_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000001202 241.0
CMS3_k127_4862618_5 lipoprotein biosynthetic process K13292 - - 0.0000000000000000000000000000000000000000000001573 177.0
CMS3_k127_4862618_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000037 129.0
CMS3_k127_4862618_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000004866 115.0
CMS3_k127_4862618_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.000000000000000000000001817 109.0
CMS3_k127_4862618_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0001679 54.0
CMS3_k127_4871962_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0050789,GO:0050793,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0065007,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1103.0
CMS3_k127_4871962_1 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 2.31e-264 825.0
CMS3_k127_4871962_2 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 606.0
CMS3_k127_4871962_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 434.0
CMS3_k127_4871962_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009798 327.0
CMS3_k127_4871962_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002056 272.0
CMS3_k127_4877122_0 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000001444 213.0
CMS3_k127_4877122_1 Polymer-forming cytoskeletal - - - 0.00000000000000000000001395 105.0
CMS3_k127_4877122_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000005593 100.0
CMS3_k127_4883474_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 367.0
CMS3_k127_4883474_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 312.0
CMS3_k127_4883474_10 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000004609 66.0
CMS3_k127_4883474_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005605 269.0
CMS3_k127_4883474_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000005676 218.0
CMS3_k127_4883474_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000001021 179.0
CMS3_k127_4883474_5 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000001467 184.0
CMS3_k127_4883474_6 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000003205 160.0
CMS3_k127_4883474_7 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000001034 164.0
CMS3_k127_4883474_8 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000006133 154.0
CMS3_k127_4883474_9 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000003269 117.0
CMS3_k127_4902178_0 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000005953 218.0
CMS3_k127_4902178_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000001148 199.0
CMS3_k127_4902178_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000003095 176.0
CMS3_k127_4902178_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000002844 81.0
CMS3_k127_4934784_0 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 319.0
CMS3_k127_4934784_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 306.0
CMS3_k127_4943852_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 480.0
CMS3_k127_4943852_1 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009409 260.0
CMS3_k127_4943852_2 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000001265 238.0
CMS3_k127_4943852_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000001983 186.0
CMS3_k127_4943852_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000001039 99.0
CMS3_k127_4943852_5 Alternative locus ID - - - 0.0000000000000000000003138 98.0
CMS3_k127_4944041_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 336.0
CMS3_k127_4944041_1 Hit family K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000123 213.0
CMS3_k127_4944041_2 Flagellar basal body rod K02396 - - 0.0000000000000003729 85.0
CMS3_k127_4944041_3 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000128 76.0
CMS3_k127_4944041_4 Lipopolysaccharide assembly protein A domain - - - 0.00014 49.0
CMS3_k127_4947465_0 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 299.0
CMS3_k127_4947465_1 PFAM regulatory protein TetR K16137 - - 0.0000000000000000000000000000000000000000003259 165.0
CMS3_k127_4947465_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000004811 79.0
CMS3_k127_4963078_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003451 256.0
CMS3_k127_4963078_1 - - - - 0.0000000000000000000000000000000000000000000000000000000003747 206.0
CMS3_k127_4963078_2 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000002914 155.0
CMS3_k127_4963078_3 ABC transporter transmembrane region K06147,K18890 - - 0.00000000000000000000000008047 109.0
CMS3_k127_4963078_4 Antioxidant, AhpC TSA family - - - 0.00005061 52.0
CMS3_k127_50079_0 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 563.0
CMS3_k127_50079_1 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0000166,GO:0003674,GO:0003824,GO:0004152,GO:0004158,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0016020,GO:0016491,GO:0016627,GO:0016634,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0032553,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 379.0
CMS3_k127_50079_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000093 98.0
CMS3_k127_50079_11 Belongs to the RelE toxin family K19092 - - 0.00000000002922 67.0
CMS3_k127_50079_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 379.0
CMS3_k127_50079_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 338.0
CMS3_k127_50079_4 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001148 288.0
CMS3_k127_50079_5 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000276 235.0
CMS3_k127_50079_6 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000002323 210.0
CMS3_k127_50079_7 Metallopeptidase family M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000003363 184.0
CMS3_k127_50079_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 0.000000000000000000000000000000000000000003512 161.0
CMS3_k127_50079_9 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.000000000000000000002412 96.0
CMS3_k127_5010306_0 tRNA_anti-like - - - 0.000000000000000001587 90.0
CMS3_k127_5010306_1 Type VI secretion system VasI, EvfG, VC_A0118 K11909 - - 0.00000000002165 66.0
CMS3_k127_5010306_2 - - - - 0.0000007664 57.0
CMS3_k127_5010306_3 zinc-ribbon domain - - - 0.0003502 49.0
CMS3_k127_5012225_0 tail specific protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 526.0
CMS3_k127_5012225_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 428.0
CMS3_k127_5012225_2 oligopeptide transport system permease protein OppB K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 319.0
CMS3_k127_5012225_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 298.0
CMS3_k127_5012225_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000003094 233.0
CMS3_k127_5012225_5 YMGG-like Gly-zipper - - - 0.00000000000000000000000000000000000001927 148.0
CMS3_k127_5012225_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000001374 148.0
CMS3_k127_5012225_7 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0000715,GO:0000716,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031326,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0043175,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000001086 127.0
CMS3_k127_5012225_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000002873 128.0
CMS3_k127_5013789_0 AcrB/AcrD/AcrF family - - - 0.0 1212.0
CMS3_k127_5013789_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 586.0
CMS3_k127_5013789_10 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000008712 164.0
CMS3_k127_5013789_11 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000008399 156.0
CMS3_k127_5013789_12 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000000000001133 143.0
CMS3_k127_5013789_13 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000000000003738 132.0
CMS3_k127_5013789_14 AsnC-type helix-turn-helix domain K05710 - - 0.0000000000000000000000000001316 117.0
CMS3_k127_5013789_15 helix_turn_helix, mercury resistance - - - 0.00000000000001077 80.0
CMS3_k127_5013789_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000005679 79.0
CMS3_k127_5013789_17 positive regulation of growth - - - 0.00000001333 61.0
CMS3_k127_5013789_18 Protease synthase and sporulation negative regulatory protein pai 1 K22441 - 2.3.1.57 0.0000000479 60.0
CMS3_k127_5013789_19 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00008125 51.0
CMS3_k127_5013789_2 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 413.0
CMS3_k127_5013789_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 415.0
CMS3_k127_5013789_4 membrane K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 327.0
CMS3_k127_5013789_5 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 304.0
CMS3_k127_5013789_6 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001573 257.0
CMS3_k127_5013789_7 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000438 246.0
CMS3_k127_5013789_8 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000003646 175.0
CMS3_k127_5013789_9 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000003169 166.0
CMS3_k127_5016347_0 IS66 C-terminal element - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004655 256.0
CMS3_k127_5024206_0 Belongs to the carbamoyltransferase HypF family K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
CMS3_k127_5024206_1 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000007342 220.0
CMS3_k127_5024206_2 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000000000004441 120.0
CMS3_k127_503835_0 TIGRFAM Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 463.0
CMS3_k127_503835_1 Phosphoglycerate mutase family K02226,K22305 - 3.1.3.3,3.1.3.73 0.0000000000000000000000000000000000001003 149.0
CMS3_k127_503835_2 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000002523 127.0
CMS3_k127_503835_3 energy transducer activity K03646,K03832 - - 0.0000009986 60.0
CMS3_k127_5052821_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.387e-196 633.0
CMS3_k127_5052821_1 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 595.0
CMS3_k127_5052821_2 ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 366.0
CMS3_k127_5052821_3 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008576 352.0
CMS3_k127_5052821_4 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.00009549 48.0
CMS3_k127_5058924_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 562.0
CMS3_k127_5058924_1 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 536.0
CMS3_k127_5058924_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 478.0
CMS3_k127_5058924_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 380.0
CMS3_k127_5058924_4 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 362.0
CMS3_k127_5058924_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000001246 198.0
CMS3_k127_5058924_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000005094 192.0
CMS3_k127_5058924_7 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0003674,GO:0003700,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 0.0000000000000000000000000000000000000000127 159.0
CMS3_k127_5058924_8 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000001484 164.0
CMS3_k127_5058924_9 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000002051 137.0
CMS3_k127_5062854_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 422.0
CMS3_k127_5062854_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 339.0
CMS3_k127_5062854_2 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000007132 147.0
CMS3_k127_5062854_3 - - - - 0.000000000000000000000004368 110.0
CMS3_k127_5062854_4 - - - - 0.00000004781 54.0
CMS3_k127_5062854_5 Oxidoreductase FAD-binding domain K05916 - 1.14.12.17 0.00000234 50.0
CMS3_k127_507243_0 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000002733 218.0
CMS3_k127_5075235_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 452.0
CMS3_k127_5075235_1 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006579 273.0
CMS3_k127_5075235_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000001629 211.0
CMS3_k127_5075235_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000001816 199.0
CMS3_k127_5075235_4 thioesterase - - - 0.0000000000000000000000000000000000000000000002634 170.0
CMS3_k127_5075235_5 - - - - 0.0000000000000000000000000000000003521 137.0
CMS3_k127_5075235_6 PFAM Archease protein family (DUF101 UPF0211) - - - 0.00000000000000000000002633 106.0
CMS3_k127_5075235_7 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000006062 78.0
CMS3_k127_5075235_8 Transcription factor Pur-alpha K21772 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0044424,GO:0044464,GO:0046686,GO:0050896,GO:0097159,GO:1901363 - 0.0000000003301 65.0
CMS3_k127_5085707_0 helicase superfamily c-terminal domain K05592 - 3.6.4.13 1.802e-209 663.0
CMS3_k127_5085707_1 FAD dependent oxidoreductase K00273 - 1.4.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 303.0
CMS3_k127_5085707_2 CYTH K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000006938 190.0
CMS3_k127_5085707_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000002763 160.0
CMS3_k127_5085707_4 Peptidase family M50 K11749 - - 0.00000000000000000000000000003117 122.0
CMS3_k127_5101615_0 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 312.0
CMS3_k127_5101615_1 Chromosomal replication initiator, DnaA K07491 - - 0.0000000000000000000000000000000000000000008273 158.0
CMS3_k127_5101615_2 general secretion pathway protein K02456,K02457,K02458,K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000005748 63.0
CMS3_k127_5101615_3 Type II secretion system (T2SS), protein K K02460 - - 0.00000002689 65.0
CMS3_k127_5101615_4 Type II secretion system (T2SS), protein J K02459 - - 0.0000001709 61.0
CMS3_k127_5102660_0 4Fe-4S binding domain - - - 3.583e-247 784.0
CMS3_k127_5102660_1 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002973 233.0
CMS3_k127_511978_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1695.0
CMS3_k127_511978_1 DNA-templated transcription, initiation K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0010565,GO:0016020,GO:0019216,GO:0019217,GO:0019222,GO:0030312,GO:0031323,GO:0044464,GO:0050789,GO:0050794,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090 - 0.0000000000000000000000000000000007355 139.0
CMS3_k127_511978_2 ChrR Cupin-like domain - - - 0.000000000000000003064 88.0
CMS3_k127_5129423_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 4.599e-249 787.0
CMS3_k127_5129423_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002934 282.0
CMS3_k127_5129423_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000005146 262.0
CMS3_k127_5129423_3 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000003457 121.0
CMS3_k127_5129423_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000001865 107.0
CMS3_k127_5129423_5 COG0457 FOG TPR repeat - - - 0.00001662 55.0
CMS3_k127_5134190_0 temperature-gated cation channel activity K04984 - - 0.0000001398 61.0
CMS3_k127_5212061_0 TrkA-N domain K11745 - - 3.132e-211 673.0
CMS3_k127_5212061_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 515.0
CMS3_k127_5212061_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000003758 151.0
CMS3_k127_5212061_11 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000005303 142.0
CMS3_k127_5212061_12 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000003281 119.0
CMS3_k127_5212061_13 glyoxalase K01759 - 4.4.1.5 0.0000004498 57.0
CMS3_k127_5212061_2 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 428.0
CMS3_k127_5212061_3 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 404.0
CMS3_k127_5212061_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000248 267.0
CMS3_k127_5212061_5 PFAM MltA domain protein K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001973 274.0
CMS3_k127_5212061_6 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002869 263.0
CMS3_k127_5212061_7 Flavodoxin-like fold K03923,K11748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008919 241.0
CMS3_k127_5212061_8 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000001442 227.0
CMS3_k127_5212061_9 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000003521 172.0
CMS3_k127_521486_0 Small-conductance mechano-sensitive channel - - - 0.000000000000000000000000001703 118.0
CMS3_k127_521486_1 PFAM response regulator receiver - - - 0.00000000000001464 77.0
CMS3_k127_5232802_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00184 - - 3.03e-222 723.0
CMS3_k127_5232802_1 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 531.0
CMS3_k127_5232802_10 cytochrome C - - - 0.0000000000002137 77.0
CMS3_k127_5232802_11 general secretion pathway protein K02456,K02650 - - 0.00000008962 62.0
CMS3_k127_5232802_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 462.0
CMS3_k127_5232802_3 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000003063 207.0
CMS3_k127_5232802_4 Pfam Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000002823 215.0
CMS3_k127_5232802_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000006354 183.0
CMS3_k127_5232802_6 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000009925 161.0
CMS3_k127_5232802_7 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000004177 153.0
CMS3_k127_5232802_8 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000003742 125.0
CMS3_k127_5232802_9 metal-sulfur cluster biosynthetic enzyme - - - 0.000000000000000000000000007205 116.0
CMS3_k127_5239622_0 Sporulation related domain - - - 0.000000001357 70.0
CMS3_k127_5271836_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.445e-216 682.0
CMS3_k127_5271836_1 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 474.0
CMS3_k127_5271836_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000001389 175.0
CMS3_k127_5271836_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000004542 139.0
CMS3_k127_5271836_4 - - - - 0.00000000000000000000000000000006966 128.0
CMS3_k127_5277920_0 - - - - 0.00000000000000000000001422 113.0
CMS3_k127_5277920_1 COG0471 Di- and tricarboxylate transporters K14445 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0034220,GO:0044425,GO:0051179,GO:0051234,GO:0055085,GO:0098656 - 0.00000000000000000000003005 102.0
CMS3_k127_5282328_0 Capsular exopolysaccharide family - - - 0.000000000000000000000000000000000000000000000000000004692 199.0
CMS3_k127_5282328_1 Tetratricopeptide repeat - - - 0.0000005072 62.0
CMS3_k127_5284613_0 ABC-type multidrug transport system ATPase component K13926 - - 0.0 1100.0
CMS3_k127_5284613_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.354e-196 629.0
CMS3_k127_5284613_2 transferase activity, transferring glycosyl groups K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 465.0
CMS3_k127_5284613_3 ABC-2 family transporter protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 402.0
CMS3_k127_5284613_4 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 381.0
CMS3_k127_5284613_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002853 258.0
CMS3_k127_5284613_6 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000002158 135.0
CMS3_k127_5293572_0 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 430.0
CMS3_k127_5293572_1 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 400.0
CMS3_k127_5293572_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K15582,K16201 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003199 264.0
CMS3_k127_5293572_3 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007094 259.0
CMS3_k127_5293572_4 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000001562 249.0
CMS3_k127_5293572_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000001257 241.0
CMS3_k127_5293572_6 PFAM Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000000000000000000001024 224.0
CMS3_k127_5293572_7 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000002826 157.0
CMS3_k127_5293572_8 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0002242 50.0
CMS3_k127_5308484_0 PFAM Cytochrome C assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 598.0
CMS3_k127_5308484_1 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 470.0
CMS3_k127_5308484_10 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000003302 98.0
CMS3_k127_5308484_11 Cytochrome c K17223 - - 0.000000000000001904 81.0
CMS3_k127_5308484_12 Cytochrome c - - - 0.000000000000004135 89.0
CMS3_k127_5308484_13 PFAM Antibiotic biosynthesis monooxygenase - GO:0003674,GO:0003824 - 0.00000003969 56.0
CMS3_k127_5308484_14 PFAM Protein kinase domain K08884 - 2.7.11.1 0.00000898 54.0
CMS3_k127_5308484_15 Elongator protein 3, MiaB family, Radical SAM - - - 0.00003723 46.0
CMS3_k127_5308484_16 - - - - 0.00005899 51.0
CMS3_k127_5308484_2 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 304.0
CMS3_k127_5308484_3 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000002247 215.0
CMS3_k127_5308484_4 AAA domain, putative AbiEii toxin, Type IV TA system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000009224 209.0
CMS3_k127_5308484_5 CcmB protein K02194 - - 0.0000000000000000000000000000000000000000000000000867 185.0
CMS3_k127_5308484_6 homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.000000000000000000000000000000000000000004278 157.0
CMS3_k127_5308484_7 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.00000000000000000000000000505 110.0
CMS3_k127_5308484_8 cheY-homologous receiver domain - - - 0.0000000000000000000004512 98.0
CMS3_k127_5332975_0 Na Pi-cotransporter family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 587.0
CMS3_k127_5332975_1 2 heme-binding sites K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 486.0
CMS3_k127_5332975_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 376.0
CMS3_k127_5332975_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000003523 246.0
CMS3_k127_5332975_4 Cys-tRNA(Pro) hydrolase activity K03976,K19055 - - 0.00000000000000000000000000000000000000000000000000000000001815 208.0
CMS3_k127_5332975_5 Rhodanese Homology Domain - - - 0.000000000000000000000000002641 116.0
CMS3_k127_5332975_6 PFAM CBS domain K04767 - - 0.00000000000000000005351 94.0
CMS3_k127_5332975_7 Sigma-54 interaction domain K21405 - - 0.000000000000000008304 86.0
CMS3_k127_5332975_8 AMP binding - - - 0.00000000000000004677 87.0
CMS3_k127_5346498_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 422.0
CMS3_k127_5346498_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 406.0
CMS3_k127_5346498_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001649 250.0
CMS3_k127_5347014_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.17e-257 811.0
CMS3_k127_5347014_1 Pfam:DUF162 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 428.0
CMS3_k127_5347014_2 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 291.0
CMS3_k127_5347014_3 Histidine kinase K00936 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009196 287.0
CMS3_k127_5347014_4 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000004848 209.0
CMS3_k127_5347014_5 LUD domain K00782 - - 0.00000000000000000009383 98.0
CMS3_k127_5349771_0 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007286 343.0
CMS3_k127_5349771_1 type II secretion system protein E K02454 - - 0.00000000000000000000000000000000006087 137.0
CMS3_k127_5349771_2 general secretion pathway protein G K02456 - - 0.0000000000000000000000000003284 118.0
CMS3_k127_5349771_3 general secretion pathway protein K02456,K02457,K02459,K10927,K12285 - - 0.0001322 50.0
CMS3_k127_5378636_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000001539 270.0
CMS3_k127_5378636_1 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000004504 241.0
CMS3_k127_5378636_2 regulatory protein, FmdB family - - - 0.000000000000000005593 88.0
CMS3_k127_5378636_3 Putative regulatory protein - - - 0.00000000000000004548 84.0
CMS3_k127_5378636_4 Competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000001214 63.0
CMS3_k127_5379776_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000001255 171.0
CMS3_k127_5379776_1 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000003344 72.0
CMS3_k127_5381056_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 596.0
CMS3_k127_5381056_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.0000000000000000000000000001105 115.0
CMS3_k127_5381056_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000001158 106.0
CMS3_k127_5381056_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000001625 56.0
CMS3_k127_5388287_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.298e-253 808.0
CMS3_k127_5388287_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 418.0
CMS3_k127_5388287_10 Transcription factor zinc-finger K09981 - - 0.00000000000000001948 85.0
CMS3_k127_5388287_11 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000003105 77.0
CMS3_k127_5388287_12 Ribosomal protein L34 K02914 - - 0.000000000001429 68.0
CMS3_k127_5388287_13 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000003136 63.0
CMS3_k127_5388287_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 319.0
CMS3_k127_5388287_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 302.0
CMS3_k127_5388287_4 - - - - 0.000000000000000000000000000000000000000000000000000000000003374 226.0
CMS3_k127_5388287_5 Transcriptional modulator of MazE toxin, MazF K07171,K18841 GO:0001558,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019222,GO:0019439,GO:0022607,GO:0030308,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0042802,GO:0042803,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044877,GO:0045926,GO:0046483,GO:0046700,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051259,GO:0051291,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000001617 163.0
CMS3_k127_5388287_6 Putative single-stranded nucleic acids-binding domain K06346 - - 0.00000000000000000000000001733 117.0
CMS3_k127_5388287_7 PFAM SpoVT AbrB K07172 - - 0.0000000000000000000000004623 108.0
CMS3_k127_5388287_8 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000002013 107.0
CMS3_k127_5388287_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000001297 84.0
CMS3_k127_5410656_0 SnoaL-like polyketide cyclase K01061,K15945 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000001269 214.0
CMS3_k127_5410656_1 translation initiation factor activity K03699 - - 0.000000000000000000000000000000000001321 146.0
CMS3_k127_5410656_2 repeat protein - - - 0.0000000000000000000000000000000000495 143.0
CMS3_k127_5410656_3 Cold shock K03704 - - 0.0000000000000000000000001263 108.0
CMS3_k127_5410656_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000009777 87.0
CMS3_k127_5422414_0 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
CMS3_k127_5422414_1 - - - - 0.00000000000000000000000000000002419 133.0
CMS3_k127_5422414_2 DNA N-6-adenine-methyltransferase (Dam) - - - 0.0000000000000000001321 94.0
CMS3_k127_5422414_3 - - - - 0.0000000000008754 74.0
CMS3_k127_5422414_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0005502 47.0
CMS3_k127_5427550_0 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 382.0
CMS3_k127_5427550_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000002726 154.0
CMS3_k127_5427550_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000001436 124.0
CMS3_k127_5430108_0 Thymidylate synthase complementing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 373.0
CMS3_k127_5430108_1 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000003811 220.0
CMS3_k127_5430108_2 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000002425 188.0
CMS3_k127_5430108_3 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.000000000000000000000000000000000000002289 156.0
CMS3_k127_5430108_4 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000001184 112.0
CMS3_k127_5436434_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 382.0
CMS3_k127_5436434_1 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000198 175.0
CMS3_k127_5436434_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000007955 121.0
CMS3_k127_5444225_0 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007839 266.0
CMS3_k127_5444225_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001933 263.0
CMS3_k127_5444225_2 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.000000000000000000000000000002201 124.0
CMS3_k127_5444225_3 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768,K02769,K02770,K02806 - 2.7.1.202 0.000000000000000008231 84.0
CMS3_k127_5455373_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 6.545e-238 749.0
CMS3_k127_5455373_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595,K06883 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 293.0
CMS3_k127_5455373_2 - - - - 0.00000000000000000000000000000002319 139.0
CMS3_k127_5456929_0 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000223 280.0
CMS3_k127_5456929_1 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000821 216.0
CMS3_k127_5456929_2 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000001883 195.0
CMS3_k127_5456929_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000001649 190.0
CMS3_k127_545720_0 protein methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 516.0
CMS3_k127_545720_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 448.0
CMS3_k127_545720_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000001856 61.0
CMS3_k127_5498296_0 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 336.0
CMS3_k127_5498296_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.000000000000000000000000000000000000000006368 162.0
CMS3_k127_5498296_2 Peptidoglycan hydrolase involved in the splitting of the septum during cell division K22409 - 3.5.1.28 0.00000000001857 79.0
CMS3_k127_5498296_3 NlpC/P60 family K19223,K19224,K21471 - - 0.0000000003815 75.0
CMS3_k127_5498296_4 General secretion pathway protein C K02452 - - 0.000001378 59.0
CMS3_k127_552979_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 538.0
CMS3_k127_552979_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 406.0
CMS3_k127_552979_2 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000001263 122.0
CMS3_k127_5563890_0 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000414 144.0
CMS3_k127_5566833_0 penicillin binding K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 343.0
CMS3_k127_5566833_1 Cell cycle protein K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 326.0
CMS3_k127_5566833_2 PFAM Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007726 282.0
CMS3_k127_5566833_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000304 61.0
CMS3_k127_5601016_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000001498 242.0
CMS3_k127_5601016_1 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000001081 147.0
CMS3_k127_5601016_2 Pilus assembly protein K02461,K02662 - - 0.0000000000003146 82.0
CMS3_k127_5610906_0 RNA ligase activity K14415 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 557.0
CMS3_k127_5610906_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 523.0
CMS3_k127_5610906_2 - - - - 0.0000000000000000000000000000006377 127.0
CMS3_k127_5625514_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 426.0
CMS3_k127_5625514_1 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000001882 273.0
CMS3_k127_5625514_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 0.00000000000000000000000000000000000001303 151.0
CMS3_k127_5625514_3 Histidine kinase - - - 0.00000000000000000000000000001122 137.0
CMS3_k127_5681413_0 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 379.0
CMS3_k127_5681413_1 YceI-like domain - - - 0.0000000000000000000000000000000000000001739 157.0
CMS3_k127_5712394_0 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 465.0
CMS3_k127_5712394_1 Tetratricopeptide repeat - - - 0.000000002268 61.0
CMS3_k127_5721959_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 590.0
CMS3_k127_5721959_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 311.0
CMS3_k127_5721959_2 Histidine biosynthesis bifunctional protein hisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000004717 223.0
CMS3_k127_5721959_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000001176 73.0
CMS3_k127_5722697_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 586.0
CMS3_k127_5722697_1 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000001173 231.0
CMS3_k127_5722697_2 MlaD protein K02067 - - 0.000000000000000000001131 105.0
CMS3_k127_5747386_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 361.0
CMS3_k127_5747386_1 PFAM Phosphomethylpyrimidine kinase type-1 K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 302.0
CMS3_k127_5747386_2 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000001731 151.0
CMS3_k127_5747386_3 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 0.00000000000000002085 83.0
CMS3_k127_5765399_0 glutamyl-tRNA reductase activity K02407,K02492 GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 389.0
CMS3_k127_5765399_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 312.0
CMS3_k127_5765399_2 gtp cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000004826 247.0
CMS3_k127_5765399_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000001337 202.0
CMS3_k127_5765399_4 Methyl-accepting chemotaxis protein (MCP) signaling domain K02660 - - 0.00000000000000000000000000000000000000000000000001738 196.0
CMS3_k127_5765399_5 regulation of single-species biofilm formation K02342,K03763,K13573 - 2.7.7.7 0.0000000000000000000000000000000000000002946 160.0
CMS3_k127_5765399_6 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000008165 140.0
CMS3_k127_5765399_7 - - - - 0.00000000009308 61.0
CMS3_k127_5766724_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 524.0
CMS3_k127_5766724_1 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 395.0
CMS3_k127_5766724_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000006393 87.0
CMS3_k127_5773482_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 332.0
CMS3_k127_5788079_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000006146 190.0
CMS3_k127_5788079_1 nuclease activity K06218 - - 0.00000000000000000000000000004411 118.0
CMS3_k127_5788079_2 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000004299 102.0
CMS3_k127_5797472_0 Carbon starvation protein K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 617.0
CMS3_k127_5797472_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 320.0
CMS3_k127_5797472_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 285.0
CMS3_k127_5797472_3 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001354 252.0
CMS3_k127_5797472_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0001505,GO:0003674,GO:0003824,GO:0004372,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006546,GO:0006563,GO:0006565,GO:0006730,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0017144,GO:0019264,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042133,GO:0042135,GO:0042136,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000005094 226.0
CMS3_k127_5797472_5 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000158 198.0
CMS3_k127_5797472_6 Berberine and berberine like - - - 0.000392 44.0
CMS3_k127_5802740_0 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000223 147.0
CMS3_k127_5802740_1 - - - - 0.0001036 50.0
CMS3_k127_5804149_0 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000001359 232.0
CMS3_k127_5804149_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000007817 219.0
CMS3_k127_5822451_0 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 590.0
CMS3_k127_5822451_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 357.0
CMS3_k127_5822451_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 289.0
CMS3_k127_5822451_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000004399 156.0
CMS3_k127_5822451_4 - - - - 0.000000000000000000000000002791 115.0
CMS3_k127_5824926_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 339.0
CMS3_k127_5824926_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000001368 208.0
CMS3_k127_5831788_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000277 203.0
CMS3_k127_5831788_1 Belongs to the ClpS family K06891 - - 0.0000000000000000000002159 101.0
CMS3_k127_5831788_2 Bacterial regulatory proteins, tetR family - - - 0.00000002535 55.0
CMS3_k127_5855898_0 FG-GAP repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001102 276.0
CMS3_k127_5855898_1 oxidoreductase activity K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000005233 241.0
CMS3_k127_5855898_2 oxidoreductase activity K17745 - 1.1.1.325 0.0000000000000000000000000000000000000000000000000000000003759 205.0
CMS3_k127_5865769_0 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000004069 243.0
CMS3_k127_5865769_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000003839 218.0
CMS3_k127_5865769_2 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000002965 173.0
CMS3_k127_5865769_3 ABC transporter K02065 - - 0.0000000000000000000000000000000000000007167 153.0
CMS3_k127_5868440_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000001998 209.0
CMS3_k127_5868440_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000003552 87.0
CMS3_k127_5902866_0 Lysine 2,3-aminomutase K01843 - 5.4.3.2 1.278e-199 630.0
CMS3_k127_5902866_1 Belongs to the Glu Leu Phe Val dehydrogenases family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 469.0
CMS3_k127_5902866_2 Domain of unknown function DUF21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
CMS3_k127_5902866_3 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000242 265.0
CMS3_k127_5902866_4 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002344 255.0
CMS3_k127_5902866_5 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K18105 GO:0003674,GO:0003824,GO:0003963,GO:0009975,GO:0016874,GO:0016886,GO:0140098 6.5.1.5 0.00000000000000000000000000000000000000000000000000000000000000000001443 245.0
CMS3_k127_5902866_6 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.00000000000000000000000001633 119.0
CMS3_k127_59306_0 PFAM RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 379.0
CMS3_k127_59306_1 Band 7 protein K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 368.0
CMS3_k127_59306_10 Gametolysin peptidase M11 - - - 0.000002012 61.0
CMS3_k127_59306_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 334.0
CMS3_k127_59306_3 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000001108 165.0
CMS3_k127_59306_4 - - - - 0.000000000000000000000000000000007544 129.0
CMS3_k127_59306_5 Cold shock protein domain K03704 - - 0.00000000000000000000000004682 108.0
CMS3_k127_59306_6 domain protein K20276 - - 0.00000000000000000000007059 115.0
CMS3_k127_59306_7 Phage shock protein A K03969 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000009109 98.0
CMS3_k127_59306_8 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000007071 87.0
CMS3_k127_59306_9 - - - - 0.000000000000002252 83.0
CMS3_k127_5940488_0 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000347 177.0
CMS3_k127_5940488_1 Cytochrome c - - - 0.000000000000000000000000000000000005092 139.0
CMS3_k127_5940488_2 PFAM thioesterase superfamily protein - - - 0.000000000000000000000000000001562 126.0
CMS3_k127_5949346_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 569.0
CMS3_k127_5949346_1 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000001102 231.0
CMS3_k127_5949346_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000001545 184.0
CMS3_k127_5949346_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000002362 177.0
CMS3_k127_5960169_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 321.0
CMS3_k127_5960169_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 292.0
CMS3_k127_5960169_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000005196 179.0
CMS3_k127_5960169_6 - - - - 0.00007244 48.0
CMS3_k127_6003488_0 Putative regulatory protein - - - 0.00000000000000000000000000000000000000000001932 166.0
CMS3_k127_6003488_1 PAN domain - - - 0.0000000000000000000000004436 111.0
CMS3_k127_6003488_2 Transcription factor zinc-finger K09981 - - 0.0000000000000000000000015 106.0
CMS3_k127_6013099_0 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001089 243.0
CMS3_k127_6013099_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000006891 218.0
CMS3_k127_6013099_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000009953 195.0
CMS3_k127_6013099_3 amino acid carrier protein K03310 - - 0.000000000000000000000000000000000000000000000005394 174.0
CMS3_k127_6013099_4 M6 family metalloprotease domain protein - - - 0.000002345 56.0
CMS3_k127_6017967_0 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 427.0
CMS3_k127_6017967_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 383.0
CMS3_k127_6017967_2 tRNA methylthiotransferase YqeV K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 369.0
CMS3_k127_6017967_3 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 361.0
CMS3_k127_6017967_4 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.000000000000000000000000000000000000000000000000000001071 194.0
CMS3_k127_6056255_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 4.955e-258 823.0
CMS3_k127_6056255_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 4.137e-208 655.0
CMS3_k127_6056255_10 negative regulation of glucose mediated signaling pathway K01120 GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0006139,GO:0006163,GO:0006195,GO:0006198,GO:0006469,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009187,GO:0009214,GO:0009259,GO:0009261,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0016787,GO:0016788,GO:0018130,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0023051,GO:0023057,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042325,GO:0042326,GO:0042578,GO:0043086,GO:0043549,GO:0043949,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0045859,GO:0045936,GO:0046058,GO:0046068,GO:0046069,GO:0046434,GO:0046483,GO:0046700,GO:0047555,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0055086,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071900,GO:0071901,GO:0072521,GO:0072523,GO:0080090,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902531,GO:1902659,GO:1902660,GO:2000479,GO:2000480 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000002926 228.0
CMS3_k127_6056255_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000006568 205.0
CMS3_k127_6056255_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000001446 181.0
CMS3_k127_6056255_13 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000004589 166.0
CMS3_k127_6056255_14 Domain of unknown function (DU1801) - - - 0.0000000000000000000000003371 108.0
CMS3_k127_6056255_15 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000008517 95.0
CMS3_k127_6056255_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0004167 46.0
CMS3_k127_6056255_18 WD domain, G-beta repeat - - - 0.0004212 52.0
CMS3_k127_6056255_2 Anthranilate synthase component I, N terminal region K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 544.0
CMS3_k127_6056255_3 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 524.0
CMS3_k127_6056255_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 412.0
CMS3_k127_6056255_5 N,N-dimethylaniline monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 373.0
CMS3_k127_6056255_6 Peptidase C26 K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 285.0
CMS3_k127_6056255_7 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000001318 260.0
CMS3_k127_6056255_8 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000154 256.0
CMS3_k127_6056255_9 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000001653 239.0
CMS3_k127_6066065_0 VWA domain containing CoxE-like protein K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 524.0
CMS3_k127_6066065_1 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 422.0
CMS3_k127_6095625_0 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 610.0
CMS3_k127_6095625_1 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000004351 181.0
CMS3_k127_6095625_2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.000000000000000000000000001697 126.0
CMS3_k127_616180_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 398.0
CMS3_k127_616180_1 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000002061 155.0
CMS3_k127_6181797_0 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004085 267.0
CMS3_k127_6181797_1 HTH-like domain K07497 - - 0.00000000000000000000000003667 108.0
CMS3_k127_6181797_2 Putative phage abortive infection protein - - - 0.0000000000000003939 82.0
CMS3_k127_6181797_3 Putative phage abortive infection protein - - - 0.00000000000003303 75.0
CMS3_k127_6181797_4 Belongs to the 'phage' integrase family - - - 0.0000005539 52.0
CMS3_k127_6199932_0 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 300.0
CMS3_k127_6199932_1 DNA-dependent DNA replication K02315,K04076 - 3.4.21.53 0.0000000000000000000000000000000000000000000000004971 185.0
CMS3_k127_6199932_2 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000003001 174.0
CMS3_k127_6199932_3 cell adhesion - - - 0.000001662 57.0
CMS3_k127_6213866_0 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 337.0
CMS3_k127_6213866_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000135 179.0
CMS3_k127_62221_0 Belongs to the bacterial solute-binding protein 9 family K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002667 273.0
CMS3_k127_62221_1 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004479 256.0
CMS3_k127_62221_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000002735 222.0
CMS3_k127_62221_3 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000005532 192.0
CMS3_k127_62221_4 PFAM Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000001048 161.0
CMS3_k127_62221_5 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.00000000000000000000000000000000000006563 151.0
CMS3_k127_62221_6 Belongs to the Fur family K03711 - - 0.0000000000000000000000001702 111.0
CMS3_k127_62221_7 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000004051 81.0
CMS3_k127_62221_8 - - - - 0.000000009663 65.0
CMS3_k127_6234384_0 Biotin carboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 443.0
CMS3_k127_6234384_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 413.0
CMS3_k127_6234384_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 335.0
CMS3_k127_6234384_3 peptide-methionine (S)-S-oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002517 266.0
CMS3_k127_6234384_4 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000000002614 130.0
CMS3_k127_6234384_5 Bacterial PH domain - - - 0.000004044 55.0
CMS3_k127_6234384_6 peptide-methionine (S)-S-oxide reductase activity - - - 0.0000747 47.0
CMS3_k127_6239654_0 Biological Process cation transport (GO 0006812), Molecular Function solute hydrogen antiporter activity (GO 0015299), Cellular Component integral to membrane (GO 0016021), Biological Process transmembrane transport (GO 0055085) K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 476.0
CMS3_k127_6239654_1 - - - - 0.00000000000000000000000000000000000000000000000000000002239 201.0
CMS3_k127_6239654_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000008992 209.0
CMS3_k127_6239654_3 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000005349 203.0
CMS3_k127_6244071_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002748 283.0
CMS3_k127_6244071_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001424 275.0
CMS3_k127_6244399_0 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 351.0
CMS3_k127_6244399_1 4 iron, 4 sulfur cluster binding K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 332.0
CMS3_k127_6244399_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000442 236.0
CMS3_k127_6244399_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000103 234.0
CMS3_k127_6244399_4 ferredoxin K05524 - - 0.0000000000000000000000000000000392 126.0
CMS3_k127_6244399_5 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000113 80.0
CMS3_k127_624995_0 Cell division protein 48 (CDC48) domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 578.0
CMS3_k127_624995_1 Oligoendopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 412.0
CMS3_k127_624995_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000005922 221.0
CMS3_k127_624995_3 Aspartyl-tRNA amidotransferase K09117 - - 0.0000000000000000000000000000000000003098 145.0
CMS3_k127_6267593_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 6.513e-239 753.0
CMS3_k127_6267593_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 381.0
CMS3_k127_6267593_2 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000006131 162.0
CMS3_k127_6267593_3 Thioesterase superfamily - - - 0.000000000000000000000000009307 115.0
CMS3_k127_6267593_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000007321 74.0
CMS3_k127_6267593_6 aspartic-type endopeptidase activity K06985 - - 0.0004248 49.0
CMS3_k127_6283284_0 malic protein domain protein K00029 - 1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 573.0
CMS3_k127_6283284_1 diguanylate cyclase - - - 0.000003686 51.0
CMS3_k127_6324058_0 Molecular chaperone. Has ATPase activity K04079 - - 5.269e-237 746.0
CMS3_k127_6324058_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 570.0
CMS3_k127_6324058_2 5-(carboxyamino)imidazole ribonucleotide synthase activity K01589 GO:0000166,GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034028,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 424.0
CMS3_k127_6324058_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000002368 227.0
CMS3_k127_6324058_4 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000003917 215.0
CMS3_k127_6324058_5 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000004124 216.0
CMS3_k127_6324058_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000003005 114.0
CMS3_k127_6324058_7 Domain of unknown function (DUF4124) - - - 0.0000000000000000000003013 108.0
CMS3_k127_6348631_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.59e-243 764.0
CMS3_k127_6348631_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 319.0
CMS3_k127_6348631_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000003996 194.0
CMS3_k127_6406969_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 429.0
CMS3_k127_6444512_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 385.0
CMS3_k127_6444512_3 - - - - 0.00006038 51.0
CMS3_k127_6496212_0 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000007143 244.0
CMS3_k127_6496212_1 ApbE family K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000007686 173.0
CMS3_k127_6496212_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000001279 164.0
CMS3_k127_6505252_0 A circularly permuted ATPgrasp - - - 4.939e-231 722.0
CMS3_k127_6505252_1 PFAM Bacterial domain of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 411.0
CMS3_k127_6505252_2 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 349.0
CMS3_k127_6505252_3 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000456 246.0
CMS3_k127_6568823_0 COG2513 PEP phosphonomutase and related enzymes K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 354.0
CMS3_k127_6568823_1 Protein of unknown function (DUF1538) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 338.0
CMS3_k127_6568823_2 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 318.0
CMS3_k127_6568823_3 COG1226 Kef-type K transport systems K10716 - - 0.0000000000000000000000000000000000003842 149.0
CMS3_k127_6568823_4 Belongs to the P(II) protein family - - - 0.00000000000000000000000000000001721 129.0
CMS3_k127_6568823_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000521 129.0
CMS3_k127_6568823_6 Bacterial protein of unknown function (DUF945) - - - 0.0000000000000000006486 100.0
CMS3_k127_6568823_7 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000001131 83.0
CMS3_k127_6585229_0 His Kinase A (phosphoacceptor) domain K07679 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009431 558.0
CMS3_k127_6585229_1 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 476.0
CMS3_k127_6585229_2 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 456.0
CMS3_k127_6585229_3 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 357.0
CMS3_k127_6585229_4 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005003 286.0
CMS3_k127_6585229_5 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000006271 189.0
CMS3_k127_6585229_6 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.000000000000000000000000000186 119.0
CMS3_k127_6606803_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 9.798e-200 638.0
CMS3_k127_6606803_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000008987 228.0
CMS3_k127_6606803_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000006464 223.0
CMS3_k127_6606803_3 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000001515 131.0
CMS3_k127_6606803_4 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000001859 103.0
CMS3_k127_6606803_5 - - - - 0.00000000000000000006485 93.0
CMS3_k127_6609974_0 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000008929 213.0
CMS3_k127_6609974_1 Belongs to the ompA family - - - 0.000000000001212 79.0
CMS3_k127_6609974_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.0000004232 51.0
CMS3_k127_661299_0 FIST C domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 472.0
CMS3_k127_661299_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 325.0
CMS3_k127_661299_2 - - - - 0.000000000000000000000000000000000000000000000000004513 186.0
CMS3_k127_661299_3 Histidine kinase - - - 0.00000000000000000000000000000000002834 139.0
CMS3_k127_6634751_0 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000002918 200.0
CMS3_k127_6693917_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 366.0
CMS3_k127_6693917_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000001247 189.0
CMS3_k127_6693917_2 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000002592 179.0
CMS3_k127_6693917_3 involved in biosynthesis of extracellular polysaccharides - - - 0.000000000000000000000000000000000000002548 148.0
CMS3_k127_6693917_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000031 143.0
CMS3_k127_6693917_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000006566 92.0
CMS3_k127_6693917_6 - - - - 0.0000000000000000883 85.0
CMS3_k127_6693917_7 - - - - 0.00000000009182 70.0
CMS3_k127_6734279_0 SMART von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000008382 207.0
CMS3_k127_6734279_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000001738 137.0
CMS3_k127_6734279_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.0000000001157 63.0
CMS3_k127_6734279_3 Phage shock protein A (IM30) suppresses sigma54-dependent transcription K03969 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000008738 68.0
CMS3_k127_6734279_4 X-Pro dipeptidyl-peptidase (S15 family) K06889,K07397 - - 0.000001698 59.0
CMS3_k127_6734279_5 Carboxylesterase K03928 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704 3.1.1.1 0.0002199 52.0
CMS3_k127_6734279_6 Putative zinc-finger - - - 0.0002827 53.0
CMS3_k127_6748311_0 CTP synthase N-terminus K01937 - 6.3.4.2 6.607e-238 746.0
CMS3_k127_6748311_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 302.0
CMS3_k127_6748311_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000001862 200.0
CMS3_k127_6748311_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000008542 175.0
CMS3_k127_677972_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 609.0
CMS3_k127_677972_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000001141 126.0
CMS3_k127_679340_0 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 512.0
CMS3_k127_679340_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000003685 204.0
CMS3_k127_679340_2 Cytidylate kinase-like family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000005922 177.0
CMS3_k127_679340_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000001971 132.0
CMS3_k127_679340_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000006795 128.0
CMS3_k127_679340_5 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000002357 121.0
CMS3_k127_6802006_0 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 471.0
CMS3_k127_6802006_1 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 291.0
CMS3_k127_6802006_2 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.00000000000000000000000000000000000003397 146.0
CMS3_k127_6802006_3 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000002943 53.0
CMS3_k127_6830886_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 430.0
CMS3_k127_6830886_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004222 259.0
CMS3_k127_6830886_2 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000000000000000000000008059 202.0
CMS3_k127_6830886_3 - - - - 0.00000000000000000000000000000000000000000000001316 175.0
CMS3_k127_6850155_0 PFAM WD domain, G-beta repeat - - - 0.0000000000004755 83.0
CMS3_k127_6850155_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000001184 66.0
CMS3_k127_6850155_2 - - - - 0.0000000113 59.0
CMS3_k127_6860756_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 497.0
CMS3_k127_6860756_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 370.0
CMS3_k127_6860756_2 GTPase activity K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 294.0
CMS3_k127_6860756_3 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000001062 173.0
CMS3_k127_6860756_4 Lysin motif - - - 0.000000000000000000000000000000000000001328 160.0
CMS3_k127_6860756_5 Transporter associated domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000007511 76.0
CMS3_k127_6921557_0 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 381.0
CMS3_k127_6921557_1 Sigma-70 region 2 K03088 - - 0.00000000000000000000000126 106.0
CMS3_k127_6937737_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 441.0
CMS3_k127_6960863_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 299.0
CMS3_k127_6960863_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 298.0
CMS3_k127_6960863_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000005133 157.0
CMS3_k127_6960863_3 MobA-like NTP transferase domain K01841,K07281,K07291 - 2.7.7.74,2.7.8.34,5.4.2.9 0.00000000000007886 72.0
CMS3_k127_696847_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 468.0
CMS3_k127_696847_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 333.0
CMS3_k127_696847_2 phosphatase activity K07025 - - 0.000000000000000000000000000000000000000000006098 171.0
CMS3_k127_696847_3 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.00000000000000000000000000000000000002554 144.0
CMS3_k127_696847_4 Nitroreductase family - - - 0.0000000000000000000000000000000000113 149.0
CMS3_k127_696847_5 DUF35 OB-fold domain, acyl-CoA-associated K07549 - - 0.00000000000000002315 86.0
CMS3_k127_696847_6 - - - - 0.00000000000000002335 83.0
CMS3_k127_696847_7 Conserved carboxylase domain K01958 - 6.4.1.1 0.000000000000004975 76.0
CMS3_k127_696847_8 Solute carrier family 35 K08978 - - 0.00000003972 60.0
CMS3_k127_6976606_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 481.0
CMS3_k127_6976606_1 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 417.0
CMS3_k127_6976606_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000001044 242.0
CMS3_k127_6976606_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000001682 232.0
CMS3_k127_6976606_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000001396 225.0
CMS3_k127_6976606_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000002741 213.0
CMS3_k127_6976606_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000009794 196.0
CMS3_k127_6976606_7 PFAM Maf family protein K06287 - - 0.00000000000000000000000000000000000000000000003058 176.0
CMS3_k127_6976606_8 YGGT family K02221 - - 0.0000000000000000001167 92.0
CMS3_k127_6976606_9 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.0000006355 52.0
CMS3_k127_6988098_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 439.0
CMS3_k127_6988098_1 Belongs to the phosphoglycerate kinase family K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.00000000000000000000000000000000000000008286 159.0
CMS3_k127_7009918_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 433.0
CMS3_k127_7009918_1 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000003224 182.0
CMS3_k127_7009918_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000006129 148.0
CMS3_k127_7011165_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 312.0
CMS3_k127_7011165_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 284.0
CMS3_k127_7018076_0 Sigma-54 interaction domain K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 463.0
CMS3_k127_7018076_1 WG containing repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 329.0
CMS3_k127_7018076_2 ferric iron binding K02217,K02255 GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008199,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033554,GO:0042221,GO:0042592,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0097577,GO:0098771 1.16.3.2 0.000000000000000000000000000000000000000000000007861 177.0
CMS3_k127_7019426_0 Belongs to the ClpX chaperone family K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 323.0
CMS3_k127_7019426_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000004942 117.0
CMS3_k127_7025701_0 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 321.0
CMS3_k127_7032644_0 ADP-glyceromanno-heptose 6-epimerase activity K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 541.0
CMS3_k127_7032644_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 534.0
CMS3_k127_7032644_2 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000001085 196.0
CMS3_k127_7032644_3 Male sterility protein K01710 - 4.2.1.46 0.0000000000000000000000003577 107.0
CMS3_k127_7043359_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 491.0
CMS3_k127_7043359_1 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000001566 138.0
CMS3_k127_7056048_0 PFAM Alcohol dehydrogenase, zinc-binding K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000007853 254.0
CMS3_k127_7056048_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.00000000008467 65.0
CMS3_k127_7056048_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000008931 61.0
CMS3_k127_7063796_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 3.409e-217 697.0
CMS3_k127_7063796_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.864e-195 617.0
CMS3_k127_7063796_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 512.0
CMS3_k127_7063796_3 EamA-like transporter family - - - 0.00000000000476 72.0
CMS3_k127_709275_0 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 473.0
CMS3_k127_709275_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 422.0
CMS3_k127_709275_2 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000781 273.0
CMS3_k127_709275_3 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000003729 212.0
CMS3_k127_709275_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000006755 121.0
CMS3_k127_7095866_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 458.0
CMS3_k127_7095866_1 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 384.0
CMS3_k127_7095866_2 geranylgeranyl reductase activity K06444,K17830 - 1.3.1.101,1.3.7.11,5.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 293.0
CMS3_k127_7097300_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 547.0
CMS3_k127_7097300_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 413.0
CMS3_k127_7097300_10 PFAM Transglycosylase SLT domain - - - 0.0000000000000000000000000000000001189 145.0
CMS3_k127_7097300_11 Flavin reductase like domain - - - 0.000000000000000000003507 100.0
CMS3_k127_7097300_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002472 261.0
CMS3_k127_7097300_3 PFAM Chorismate binding-like K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000006755 267.0
CMS3_k127_7097300_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002767 246.0
CMS3_k127_7097300_5 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000001716 248.0
CMS3_k127_7097300_6 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000007592 211.0
CMS3_k127_7097300_7 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000003649 203.0
CMS3_k127_7097300_8 Amino-transferase class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000008996 187.0
CMS3_k127_7097300_9 PFAM DSBA oxidoreductase - - - 0.000000000000000000000000000000000000000000001305 174.0
CMS3_k127_7103450_0 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000002457 197.0
CMS3_k127_7103450_1 translation release factor activity - - - 0.000000000000000000000000003218 114.0
CMS3_k127_7108028_0 Malate synthase K01638 - 2.3.3.9 8.476e-287 888.0
CMS3_k127_7108028_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000004955 188.0
CMS3_k127_7108028_2 Transglycosylase SLT domain K08309 - - 0.000000000000000000000009603 110.0
CMS3_k127_7130005_0 PFAM Aminotransferase class I and II K00639,K00652,K01906 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47,6.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 415.0
CMS3_k127_7130005_1 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000009299 84.0
CMS3_k127_7156527_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002807 286.0
CMS3_k127_7156527_1 Luciferase-like monooxygenase - - - 0.000001239 52.0
CMS3_k127_7162828_1 Putative DNA-binding domain - - - 0.0000000000000000002901 95.0
CMS3_k127_7185651_0 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes K21784 GO:0003674,GO:0005488,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0048037,GO:0070279,GO:0070280,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 349.0
CMS3_k127_7185651_1 3-beta hydroxysteroid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000005345 202.0
CMS3_k127_7185651_2 - - - - 0.00000000000003316 75.0
CMS3_k127_7190048_0 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 364.0
CMS3_k127_7190048_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000001948 264.0
CMS3_k127_7190048_2 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000008498 172.0
CMS3_k127_7190048_3 - - - - 0.00000000000000000000000000000000000000000004631 169.0
CMS3_k127_7190048_4 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002633 141.0
CMS3_k127_7190048_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000002278 92.0
CMS3_k127_7199053_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 422.0
CMS3_k127_7199053_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 349.0
CMS3_k127_7199053_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000002165 154.0
CMS3_k127_7221951_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.171e-241 757.0
CMS3_k127_7221951_1 potassium ion transport K03281,K03455,K07085,K10716 - - 3.286e-208 668.0
CMS3_k127_7221951_10 - - - - 0.00000000000004836 73.0
CMS3_k127_7221951_2 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 465.0
CMS3_k127_7221951_3 FRG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 386.0
CMS3_k127_7221951_4 Luciferase-like monooxygenase K21731 - 1.14.13.162 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 336.0
CMS3_k127_7221951_5 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 330.0
CMS3_k127_7221951_6 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000004219 212.0
CMS3_k127_7221951_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000005073 146.0
CMS3_k127_7221951_8 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000000000009481 126.0
CMS3_k127_7221951_9 - - - - 0.000000000000000000000004647 103.0
CMS3_k127_7222525_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 548.0
CMS3_k127_7222525_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000001574 195.0
CMS3_k127_7222525_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000009836 190.0
CMS3_k127_7222525_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000002257 122.0
CMS3_k127_7222525_4 LppC putative lipoprotein K07121 - - 0.0000000000000000001412 101.0
CMS3_k127_7222525_5 - - - - 0.0000000000000001333 83.0
CMS3_k127_7222525_6 Dodecin K09165 - - 0.0000000000000001959 81.0
CMS3_k127_7222525_8 - - - - 0.0001665 45.0
CMS3_k127_7228749_0 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007101 244.0
CMS3_k127_7228749_1 Peptidase family M28 K13049 - - 0.000000000000000000000000000000000000000000000000000000000001295 216.0
CMS3_k127_7228749_2 - - - - 0.000000000000000000000000000000000000000000009555 170.0
CMS3_k127_7228749_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000004387 145.0
CMS3_k127_7228749_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000005326 150.0
CMS3_k127_7228749_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000005027 139.0
CMS3_k127_7228749_6 Belongs to the BolA IbaG family - - - 0.0000000000000000000000005744 106.0
CMS3_k127_7241672_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 526.0
CMS3_k127_7241672_1 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 333.0
CMS3_k127_7241672_2 Hemimethylated DNA-binding protein YccV like K11940 - - 0.000000000000000000000000000000000006912 138.0
CMS3_k127_7241672_3 - - - - 0.00000000000000004328 85.0
CMS3_k127_7241672_4 - - - - 0.000000000000284 78.0
CMS3_k127_7253341_0 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 562.0
CMS3_k127_7253341_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000004474 233.0
CMS3_k127_7253341_2 energy transducer activity K03832 - - 0.000000000000001358 85.0
CMS3_k127_7253450_0 Sodium:neurotransmitter symporter family - - - 3.146e-210 664.0
CMS3_k127_7253450_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 391.0
CMS3_k127_7253450_10 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000057 108.0
CMS3_k127_7253450_11 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000005878 97.0
CMS3_k127_7253450_12 - - - - 0.000144 50.0
CMS3_k127_7253450_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 387.0
CMS3_k127_7253450_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 368.0
CMS3_k127_7253450_4 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 361.0
CMS3_k127_7253450_5 Aspartyl Asparaginyl beta-hydroxylase K00476,K12979 - 1.14.11.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 294.0
CMS3_k127_7253450_6 HAMP domain - - - 0.0000000000000000000000000000000002 143.0
CMS3_k127_7253450_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000001046 130.0
CMS3_k127_7253450_8 Nucleotidyltransferase - - - 0.00000000000000000000000001483 116.0
CMS3_k127_7253450_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000002735 112.0
CMS3_k127_7269724_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001102 255.0
CMS3_k127_7269724_1 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000269 216.0
CMS3_k127_7269724_2 - - - - 0.00000003059 62.0
CMS3_k127_7276473_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 602.0
CMS3_k127_7276473_1 Fungalysin metallopeptidase (M36) - - - 0.00002937 50.0
CMS3_k127_7301999_0 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 467.0
CMS3_k127_7301999_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 394.0
CMS3_k127_7301999_2 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000004111 177.0
CMS3_k127_7303751_0 transposase activity K07483,K07497 - - 0.00002507 46.0
CMS3_k127_7308424_0 Signal transducing histidine kinase, homodimeric K02487,K03407,K06596 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 648.0
CMS3_k127_7308424_1 response regulator K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 422.0
CMS3_k127_7308424_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000001205 276.0
CMS3_k127_7308424_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000007316 197.0
CMS3_k127_7308424_4 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000004087 131.0
CMS3_k127_7308424_5 Two component signalling adaptor domain K03408 - - 0.00000000002057 75.0
CMS3_k127_7313145_0 Belongs to the ParB family K03497 - - 0.0000000000002946 82.0
CMS3_k127_7322737_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1010.0
CMS3_k127_7322737_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 340.0
CMS3_k127_7322737_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000004969 136.0
CMS3_k127_7328515_0 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000000000000001074 150.0
CMS3_k127_7333955_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 547.0
CMS3_k127_7333955_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 393.0
CMS3_k127_7333955_2 PFAM Vitamin K epoxide reductase family - - - 0.00000000000000000000000000000000009136 140.0
CMS3_k127_7333955_3 Membrane transport protein K07088 - - 0.00000000000000000000000000000009528 134.0
CMS3_k127_7333955_4 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000119 99.0
CMS3_k127_7333955_5 Membrane transport protein K07088 - - 0.00008456 46.0
CMS3_k127_7366181_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000366 280.0
CMS3_k127_7366181_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000008866 250.0
CMS3_k127_7366181_2 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000001505 65.0
CMS3_k127_7404592_0 Proton-conducting membrane transporter K03879 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 420.0
CMS3_k127_7404592_1 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) - - - 0.000000000000000000000000000000000000000000000000000000006122 201.0
CMS3_k127_740516_0 transport system involved in gliding motility, auxiliary K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 310.0
CMS3_k127_740516_1 Domain of unknown function (DUF4340) - - - 0.000000000000000000007965 106.0
CMS3_k127_740516_2 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000003433 69.0
CMS3_k127_7435760_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 9.48e-215 686.0
CMS3_k127_7435760_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 493.0
CMS3_k127_7435760_10 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000001117 81.0
CMS3_k127_7435760_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 414.0
CMS3_k127_7435760_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 407.0
CMS3_k127_7435760_4 Gamma-glutamyltranspeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000154 216.0
CMS3_k127_7435760_5 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000009454 205.0
CMS3_k127_7435760_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000002302 208.0
CMS3_k127_7435760_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000007091 147.0
CMS3_k127_7435760_8 FIST N domain - - - 0.000000000000000000000000000000000007857 151.0
CMS3_k127_7435760_9 quinolinate catabolic process K00278,K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 0.0000000000000000000000006944 106.0
CMS3_k127_7500111_0 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 374.0
CMS3_k127_7500111_1 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003651 244.0
CMS3_k127_7500111_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000001773 222.0
CMS3_k127_7500111_3 - - - - 0.000000000000000000466 96.0
CMS3_k127_7500111_4 Cupin 2, conserved barrel domain protein K21700 - - 0.0000000000009199 77.0
CMS3_k127_7500111_5 Cupin 2, conserved barrel domain protein - - - 0.000000000001683 76.0
CMS3_k127_7500111_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000002402 68.0
CMS3_k127_7532583_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.469e-224 701.0
CMS3_k127_7532583_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 544.0
CMS3_k127_7532583_2 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 307.0
CMS3_k127_7532583_3 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 282.0
CMS3_k127_7532583_4 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006084 273.0
CMS3_k127_7532583_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001609 266.0
CMS3_k127_7532583_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000001164 79.0
CMS3_k127_7532583_7 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000005319 68.0
CMS3_k127_7532583_8 Integrin alpha (beta-propellor repeats). - - - 0.000005307 59.0
CMS3_k127_7533857_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 559.0
CMS3_k127_7533857_1 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000005845 199.0
CMS3_k127_7533857_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000004148 136.0
CMS3_k127_7581582_0 PFAM response regulator receiver - - - 0.0000000000000000000000016 113.0
CMS3_k127_7581582_1 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000017 76.0
CMS3_k127_7581582_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03591 - - 0.00003416 54.0
CMS3_k127_7610868_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1873.0
CMS3_k127_7610868_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.523e-204 645.0
CMS3_k127_7610868_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 452.0
CMS3_k127_762843_0 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000002264 91.0
CMS3_k127_762843_1 Response regulator receiver K02658 - - 0.00000000000000003866 83.0
CMS3_k127_79853_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000006421 188.0
CMS3_k127_79853_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000247 189.0
CMS3_k127_79853_2 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000000000000000000233 193.0
CMS3_k127_79853_3 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000005349 173.0
CMS3_k127_79853_4 Appr-1'-p processing enzyme - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000002034 155.0
CMS3_k127_805388_0 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000001446 140.0
CMS3_k127_805388_1 Surface antigen K07277 - - 0.00000000000000000000000007575 110.0
CMS3_k127_805388_2 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000005899 110.0
CMS3_k127_86261_0 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 356.0
CMS3_k127_864192_0 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 529.0
CMS3_k127_864192_1 atpase related to the helicase subunit of the holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 466.0
CMS3_k127_864192_2 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000000000000000000003021 208.0
CMS3_k127_864192_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000265 201.0
CMS3_k127_864192_4 - - - - 0.00000000000000000000000000000000000000000000000191 182.0
CMS3_k127_864192_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000001097 121.0
CMS3_k127_864192_6 Protein involved in outer membrane biogenesis K07289,K09800 - - 0.0000000000000000000000000574 126.0
CMS3_k127_864192_7 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000001139 77.0
CMS3_k127_864192_8 ubiE/COQ5 methyltransferase family - - - 0.0000005909 54.0
CMS3_k127_874615_0 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 398.0
CMS3_k127_874615_1 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000003557 242.0
CMS3_k127_874615_10 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0006314 45.0
CMS3_k127_874615_2 GTP binding K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000001411 233.0
CMS3_k127_874615_3 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000005225 219.0
CMS3_k127_874615_4 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000188 211.0
CMS3_k127_874615_5 Histidine biosynthesis protein K01814 - 5.3.1.16 0.000000000000000000000000000004979 121.0
CMS3_k127_874615_6 Protein of unknown function (DUF971) - - - 0.000000000000000000000002026 106.0
CMS3_k127_874615_7 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000002166 89.0
CMS3_k127_874615_8 - - - - 0.0000000000001846 78.0
CMS3_k127_874615_9 COG2801 Transposase and inactivated derivatives - - - 0.0000005826 51.0
CMS3_k127_882140_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 613.0
CMS3_k127_882140_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 361.0
CMS3_k127_882140_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001523 294.0
CMS3_k127_882140_3 TIGRFAM ROK family protein K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000003476 219.0
CMS3_k127_882140_4 COGs COG2928 conserved - - - 0.000000000000000000000000000000000000000000003728 171.0
CMS3_k127_882140_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000005721 143.0
CMS3_k127_882140_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000001229 127.0
CMS3_k127_882140_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000003331 93.0
CMS3_k127_924920_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 6.89e-198 635.0
CMS3_k127_924920_1 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 403.0
CMS3_k127_924920_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 349.0
CMS3_k127_924920_3 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000003198 207.0
CMS3_k127_924920_4 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain - - - 0.0000000000000000000000000000000000000000007131 166.0
CMS3_k127_924920_5 Cytochrome c - - - 0.00000000000000000000000000000000000000002696 158.0
CMS3_k127_924920_6 Helix-turn-helix domain - - - 0.00009109 52.0
CMS3_k127_93029_0 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000000000000004496 141.0
CMS3_k127_975777_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 417.0
CMS3_k127_975777_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 356.0
CMS3_k127_975777_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000000271 143.0
CMS3_k127_975777_3 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000000004195 129.0
CMS3_k127_975777_4 Catalyzes the transfer of the 2-phospholactate moiety from lactyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) with the formation of the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5- deazariboflavin (F420-0) and GMP K11212 - 2.7.8.28 0.0000000000000000000004531 98.0
CMS3_k127_975777_5 - - - - 0.000000000000000000002628 103.0
CMS3_k127_975777_6 - - - - 0.0000001141 58.0