Overview

ID MAG00585
Name CMS3_bin.99
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order SZUA-152
Family SZUA-152
Genus JAKEGK01
Species
Assembly information
Completeness (%) 63.54
Contamination (%) 2.24
GC content (%) 46.0
N50 (bp) 5,966
Genome size (bp) 2,818,814

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2553

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1000354_0 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 295.0
CMS3_k127_1000354_1 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000003799 207.0
CMS3_k127_1000354_2 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000005654 192.0
CMS3_k127_1000354_3 Protein of unknown function (DUF523) - - - 0.000000000000000000000000000003588 126.0
CMS3_k127_1039637_0 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 473.0
CMS3_k127_1039637_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 376.0
CMS3_k127_1039637_2 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 334.0
CMS3_k127_1039637_3 lipoprotein transporter activity K02003 GO:0008150,GO:0009405,GO:0009605,GO:0009607,GO:0043207,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0075136 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007868 278.0
CMS3_k127_1039637_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002253 255.0
CMS3_k127_1039637_5 PFAM Aminotransferase class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000004925 250.0
CMS3_k127_1039637_6 Maf-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006857 244.0
CMS3_k127_1039637_7 COG0470 ATPase involved in DNA replication K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000003674 222.0
CMS3_k127_1039637_8 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000000000000002382 186.0
CMS3_k127_1039637_9 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.00000000004359 64.0
CMS3_k127_1049049_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 486.0
CMS3_k127_1049049_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003623 247.0
CMS3_k127_1049049_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000006293 230.0
CMS3_k127_1049049_3 Protein of unknown function (DUF3185) - - - 0.0000000000000000000000000000001496 124.0
CMS3_k127_1049049_4 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000007306 80.0
CMS3_k127_1049049_5 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.000000000821 62.0
CMS3_k127_1049800_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 284.0
CMS3_k127_1049800_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
CMS3_k127_1049800_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000005814 142.0
CMS3_k127_1049800_3 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000002178 117.0
CMS3_k127_1049800_4 protein conserved in bacteria K09920 - - 0.000000000000000000005233 98.0
CMS3_k127_1049800_5 ferredoxin-NADP+ reductase activity - - - 0.000000000000000003932 92.0
CMS3_k127_1049800_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000008529 76.0
CMS3_k127_1056524_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 435.0
CMS3_k127_1056524_1 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 335.0
CMS3_k127_1056524_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 318.0
CMS3_k127_1056524_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000001318 198.0
CMS3_k127_1056524_4 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.00000000000000000000000000000000000000003405 154.0
CMS3_k127_1056524_5 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000006718 154.0
CMS3_k127_1056524_6 Bacterial Fe(2+) trafficking - - - 0.0000000000000000000000000000000008708 132.0
CMS3_k127_1056524_7 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000006359 125.0
CMS3_k127_1056524_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000006671 90.0
CMS3_k127_1056524_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.000000000000000009299 84.0
CMS3_k127_1060101_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.088e-198 626.0
CMS3_k127_1060101_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 605.0
CMS3_k127_1060101_2 PFAM regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000000000000002609 189.0
CMS3_k127_1060101_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000003579 159.0
CMS3_k127_1060101_4 GGDEF domain - - - 0.000000000000000000000000000000000005796 149.0
CMS3_k127_1060101_5 Pfam cytochrome c - - - 0.00000000000002592 76.0
CMS3_k127_1060101_7 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0004317 43.0
CMS3_k127_1061834_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 434.0
CMS3_k127_1061834_1 Na Pi-Cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 326.0
CMS3_k127_1068065_0 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 463.0
CMS3_k127_1072636_0 Rhs Family - - - 6.762e-228 767.0
CMS3_k127_1072636_1 Pfam:HipA_N K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 571.0
CMS3_k127_1072636_3 Helix-turn-helix XRE-family like proteins - - - 0.000000000002865 67.0
CMS3_k127_1077728_0 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000003111 207.0
CMS3_k127_1077728_1 Transglycosylase K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000609 166.0
CMS3_k127_1077728_2 AIG2-like family - - - 0.0000000000000000000000000000000000009777 145.0
CMS3_k127_1077728_3 protein conserved in bacteria K09908 - - 0.0000000002 70.0
CMS3_k127_1086015_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 476.0
CMS3_k127_1086015_1 - - - - 0.000000000000000000000000000000000000000000000000000000001482 220.0
CMS3_k127_1086015_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000004991 177.0
CMS3_k127_1086015_3 - - - - 0.0003328 44.0
CMS3_k127_1093275_0 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 445.0
CMS3_k127_1093275_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 335.0
CMS3_k127_1093275_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001089 232.0
CMS3_k127_1093275_3 Na H antiporter - - - 0.000000000000000000000000000000000000000000000000000001038 193.0
CMS3_k127_1093275_4 PFAM methyltransferase - - - 0.000000000000000000000000000000000000000000000000000004791 198.0
CMS3_k127_1093275_5 Rhodanese Homology Domain - - - 0.000000000000000000000001429 109.0
CMS3_k127_1102922_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 377.0
CMS3_k127_1102922_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000192 275.0
CMS3_k127_1102922_2 Beta-lactamase enzyme family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002763 248.0
CMS3_k127_1102922_3 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000001951 107.0
CMS3_k127_1128032_0 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 398.0
CMS3_k127_1128032_1 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 367.0
CMS3_k127_1128032_2 HPP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 305.0
CMS3_k127_1128032_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001217 261.0
CMS3_k127_1128032_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000102 233.0
CMS3_k127_1128032_5 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000001306 158.0
CMS3_k127_1128032_6 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000009613 151.0
CMS3_k127_1128032_7 Domain of unknown function (DUF1971) - - - 0.00000000000000000000008126 100.0
CMS3_k127_1128032_8 - - - - 0.000000000000000000001855 95.0
CMS3_k127_1128032_9 HPP family K07168 - - 0.0000000000000000217 89.0
CMS3_k127_1128914_0 Histidine kinase K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 403.0
CMS3_k127_1128914_1 Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000705 138.0
CMS3_k127_1128914_2 PFAM blue (type 1) copper domain protein - - - 0.00000009107 60.0
CMS3_k127_1134506_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2143.0
CMS3_k127_1134506_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1173.0
CMS3_k127_1134506_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 344.0
CMS3_k127_1134506_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000001073 240.0
CMS3_k127_1134506_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000005978 178.0
CMS3_k127_1134506_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000005055 104.0
CMS3_k127_1135166_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 416.0
CMS3_k127_1135166_1 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 357.0
CMS3_k127_1135166_2 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 329.0
CMS3_k127_1135166_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 283.0
CMS3_k127_1135166_4 Transaldolase K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000007559 200.0
CMS3_k127_1135166_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000001386 195.0
CMS3_k127_114448_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.016e-308 969.0
CMS3_k127_114448_1 phosphoesterase, PA-phosphatase related - - - 7.526e-201 641.0
CMS3_k127_114448_10 Forkhead associated domain - - - 0.000000000000000000000004954 114.0
CMS3_k127_114448_11 membrane - - - 0.00000000000000000000783 93.0
CMS3_k127_114448_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 451.0
CMS3_k127_114448_3 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 386.0
CMS3_k127_114448_4 Redoxin - GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 371.0
CMS3_k127_114448_5 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 361.0
CMS3_k127_114448_6 Transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 342.0
CMS3_k127_114448_7 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 300.0
CMS3_k127_114448_8 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000006535 129.0
CMS3_k127_114448_9 Cytochrome c - - - 0.00000000000000000000000000004803 122.0
CMS3_k127_1157599_0 Belongs to the peptidase S16 family - - - 4.66e-287 904.0
CMS3_k127_1157599_1 Protein of unknown function (DUF2846) - - - 0.00000000000000000000000000000007367 130.0
CMS3_k127_1157599_2 Belongs to the universal stress protein A family - - - 0.000000000002813 76.0
CMS3_k127_1157599_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.0000006942 58.0
CMS3_k127_1159839_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.913e-302 940.0
CMS3_k127_1159839_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 325.0
CMS3_k127_1159839_2 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002566 248.0
CMS3_k127_1159839_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000001307 192.0
CMS3_k127_1159839_4 Tetratricopeptide repeat K02200 - - 0.00000000000000000000000000000000000000000003108 173.0
CMS3_k127_1159839_5 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000001259 153.0
CMS3_k127_1159839_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000003229 85.0
CMS3_k127_1159839_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000004537 50.0
CMS3_k127_1177834_0 PFAM malic K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 600.0
CMS3_k127_1177834_1 nuclease - - - 0.000000000000000000000000000000000000000002538 166.0
CMS3_k127_1177834_2 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000000002225 139.0
CMS3_k127_1177834_3 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000001859 123.0
CMS3_k127_1177834_4 OmpA-like transmembrane domain - - - 0.00000001214 63.0
CMS3_k127_1185624_0 Multi-copper - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 540.0
CMS3_k127_1185624_1 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 456.0
CMS3_k127_1185624_10 transcriptional regulator, Rrf2 family K13771 - - 0.000000000000000000000000000000000000000004216 159.0
CMS3_k127_1185624_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000005089 137.0
CMS3_k127_1185624_12 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0000000000000000000002716 100.0
CMS3_k127_1185624_13 BON domain - - - 0.000000000000000006473 91.0
CMS3_k127_1185624_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 402.0
CMS3_k127_1185624_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02022,K16922,K20345 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 381.0
CMS3_k127_1185624_4 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 301.0
CMS3_k127_1185624_5 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005799 274.0
CMS3_k127_1185624_6 cytochrome C, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001025 255.0
CMS3_k127_1185624_7 FemAB family - - - 0.0000000000000000000000000000000000000000000000000002534 198.0
CMS3_k127_1185624_8 lipopolysaccharide N-acetylmannosaminouronosyltransferase activity - - - 0.00000000000000000000000000000000000000000000000004617 186.0
CMS3_k127_1185624_9 - - - - 0.0000000000000000000000000000000000000000000000224 183.0
CMS3_k127_1187153_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 352.0
CMS3_k127_1187153_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 297.0
CMS3_k127_1187153_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001521 256.0
CMS3_k127_1187153_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000005958 192.0
CMS3_k127_1187153_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000002732 193.0
CMS3_k127_1187153_5 Methyltransferase domain - - - 0.000000000000001059 87.0
CMS3_k127_119333_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 5.733e-309 970.0
CMS3_k127_119333_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 5.17e-278 866.0
CMS3_k127_119333_2 Participates in both transcription termination and antitermination K02600 - - 1.52e-220 694.0
CMS3_k127_119333_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 360.0
CMS3_k127_119333_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000007585 170.0
CMS3_k127_119333_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000001078 141.0
CMS3_k127_119333_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000002448 132.0
CMS3_k127_119333_7 - - - - 0.000000001578 58.0
CMS3_k127_1199273_0 - - - - 0.000000000001587 71.0
CMS3_k127_1201756_0 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 412.0
CMS3_k127_1201756_1 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006793 274.0
CMS3_k127_1201756_2 Chemotaxis phosphatase CheX K03409 - - 0.000000003826 63.0
CMS3_k127_1208903_0 in Yersinia the HmsR protein is an inner membrane protein K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 471.0
CMS3_k127_1208903_1 Hypothetical glycosyl hydrolase family 13 K11931 - - 0.00000000000000001509 93.0
CMS3_k127_1208903_2 Predicted periplasmic lipoprotein (DUF2279) K05811 - - 0.000000000002172 72.0
CMS3_k127_1221041_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 432.0
CMS3_k127_1221041_1 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000000000000003453 160.0
CMS3_k127_1221041_2 Predicted membrane protein (DUF2157) - - - 0.00000000000000000009918 89.0
CMS3_k127_1228803_0 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 402.0
CMS3_k127_1228803_1 Kelch motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 361.0
CMS3_k127_1228803_2 alpha beta - - - 0.00000000000000000000000000000000000000000000000000002275 199.0
CMS3_k127_1228803_3 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000000000000000000000000000000005452 183.0
CMS3_k127_1228803_4 Domain of unknown function (DUF4397) - - - 0.0000000000000000000001217 115.0
CMS3_k127_1228803_5 PFAM Kelch - - - 0.000000000000000000002864 109.0
CMS3_k127_1228803_6 metallopeptidase activity K01205 - 3.2.1.50 0.000000000001996 81.0
CMS3_k127_1240859_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 490.0
CMS3_k127_1240859_1 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 439.0
CMS3_k127_1240859_2 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 333.0
CMS3_k127_1252704_0 aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 475.0
CMS3_k127_1252704_1 RNA polymerase sigma K03087 GO:0000988,GO:0000990,GO:0001000,GO:0001121,GO:0001123,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 417.0
CMS3_k127_1252704_2 Bacterial-like globin - - - 0.000000000000000000000000000000000000000000000000000000138 198.0
CMS3_k127_1252704_3 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000007509 108.0
CMS3_k127_1255318_0 Belongs to the ClpA ClpB family K11907 - - 0.0 1169.0
CMS3_k127_1255318_1 Type VI secretion K11896 - - 2.999e-231 731.0
CMS3_k127_1255318_2 Type VI secretion, TssG K11895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 302.0
CMS3_k127_1255318_3 Gene 25-like lysozyme K11897 - - 0.00000000000000000000000000000000000000000026 162.0
CMS3_k127_1262596_0 GTP-binding protein TypA K06207 - - 0.0 1004.0
CMS3_k127_1262596_1 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 426.0
CMS3_k127_1298969_0 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 426.0
CMS3_k127_1298969_1 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001647 257.0
CMS3_k127_1298969_2 Domain of unknown function (DUF1853) K09977 - - 0.0000000000000000000000000000000000000000007318 169.0
CMS3_k127_1301052_0 ABC transporter transmembrane region K06147 - - 6.407e-296 917.0
CMS3_k127_1301052_1 COG2801 Transposase and inactivated derivatives K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003914 279.0
CMS3_k127_1306945_0 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004409 267.0
CMS3_k127_1306945_1 Putative transposase, YhgA-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002149 260.0
CMS3_k127_1306945_2 PKD domain - - - 0.000000000000000000000000000000000011 146.0
CMS3_k127_13182_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 461.0
CMS3_k127_13182_1 Chemotaxis protein histidine kinase K03407 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009892,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010605,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032879,GO:0032991,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0036211,GO:0040011,GO:0040012,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045937,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051270,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0098561,GO:0140096,GO:1901564,GO:1901873,GO:1901875,GO:1902021,GO:2000145 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 431.0
CMS3_k127_13182_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 292.0
CMS3_k127_13182_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000001118 260.0
CMS3_k127_1363495_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 476.0
CMS3_k127_1363495_1 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000000000000000000000000000000000000001553 201.0
CMS3_k127_137151_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 453.0
CMS3_k127_137151_1 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 322.0
CMS3_k127_137151_2 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 302.0
CMS3_k127_137151_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000004871 241.0
CMS3_k127_137151_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000001556 186.0
CMS3_k127_137151_5 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000001166 100.0
CMS3_k127_1379243_0 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 550.0
CMS3_k127_1379243_1 UreD urease accessory protein K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 249.0
CMS3_k127_1379243_2 Opacity family porin protein K03286 - - 0.00000000000000000000000000000000000000000000000000007731 198.0
CMS3_k127_1379243_3 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000001759 177.0
CMS3_k127_1379243_4 Belongs to the urease beta subunit family K01427,K01428,K01429,K14048 - 3.5.1.5 0.000000000000000000000000000000000000000000000001501 174.0
CMS3_k127_1379243_5 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000000662 134.0
CMS3_k127_1386176_0 von willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 596.0
CMS3_k127_1386176_1 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 327.0
CMS3_k127_1386176_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006076 284.0
CMS3_k127_1386176_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000001193 144.0
CMS3_k127_1386176_4 COG1734 DnaK suppressor protein K06204 - - 0.000000008747 64.0
CMS3_k127_1386176_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.0000229 48.0
CMS3_k127_1390702_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 418.0
CMS3_k127_1390702_1 3-carboxyethylcatechol 2,3-dioxygenase activity K04100 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 381.0
CMS3_k127_1390702_2 - - - - 0.00000000309 66.0
CMS3_k127_1403122_0 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 339.0
CMS3_k127_1403122_1 PASTA K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000000005941 83.0
CMS3_k127_1403122_2 Involved in the tonB-independent uptake of proteins K13669 - - 0.0000000626 67.0
CMS3_k127_1404949_0 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 317.0
CMS3_k127_1404949_2 DsrE/DsrF-like family - - - 0.0000000000000000016 86.0
CMS3_k127_1404949_3 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000001225 62.0
CMS3_k127_1407210_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.031e-199 632.0
CMS3_k127_1407210_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001229 276.0
CMS3_k127_1407210_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000003011 215.0
CMS3_k127_1407210_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000002691 206.0
CMS3_k127_1407210_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000001085 188.0
CMS3_k127_1407210_5 Sel1-like repeats. K07126 - - 0.0000000000000000000000000006696 130.0
CMS3_k127_1407210_6 Protein of unknown function (DUF3106) - - - 0.000000000000000000001828 100.0
CMS3_k127_1407210_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000007678 68.0
CMS3_k127_1407210_8 - - - - 0.000005992 53.0
CMS3_k127_1414799_0 PFAM Sulfate transporter antisigma-factor antagonist STAS K03321 - - 3.835e-247 773.0
CMS3_k127_1414799_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000002564 199.0
CMS3_k127_1414799_2 Protein required for attachment to host cells - - - 0.0000000000000000000000000000000000001336 147.0
CMS3_k127_1414799_3 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000001896 93.0
CMS3_k127_1414799_5 LPP20 lipoprotein - - - 0.000008319 57.0
CMS3_k127_142231_0 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 515.0
CMS3_k127_142231_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 410.0
CMS3_k127_142231_2 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 319.0
CMS3_k127_142231_3 Belongs to the DsrF TusC family K07236 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000000003473 225.0
CMS3_k127_142231_4 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000005272 220.0
CMS3_k127_142231_5 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000000007312 196.0
CMS3_k127_142231_6 sulfur relay protein TusB DsrH K07237 - - 0.0000000000000000000000000000000001312 135.0
CMS3_k127_145354_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 578.0
CMS3_k127_145354_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 540.0
CMS3_k127_145354_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 382.0
CMS3_k127_145354_3 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002706 240.0
CMS3_k127_145354_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000003773 211.0
CMS3_k127_1463112_0 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000001233 225.0
CMS3_k127_1463112_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000004246 131.0
CMS3_k127_1463112_2 TIGRFAM type I secretion outer membrane protein, TolC family K12340 GO:0002790,GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008104,GO:0008150,GO:0009279,GO:0009306,GO:0009987,GO:0010033,GO:0014070,GO:0015031,GO:0015075,GO:0015267,GO:0015288,GO:0015318,GO:0015562,GO:0015688,GO:0015711,GO:0015833,GO:0015850,GO:0015891,GO:0015893,GO:0016020,GO:0016021,GO:0019867,GO:0022803,GO:0022829,GO:0022838,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032940,GO:0032991,GO:0033036,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0042886,GO:0042930,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0046618,GO:0046903,GO:0047485,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098796,GO:1901678,GO:1902495,GO:1990195,GO:1990196,GO:1990281,GO:1990351 - 0.00000000000006631 80.0
CMS3_k127_1463112_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.00001681 48.0
CMS3_k127_1472350_0 OmpA family - - - 0.0 2004.0
CMS3_k127_1472350_1 Domain of unknown function DUF11 - - - 0.0 1673.0
CMS3_k127_1472350_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 587.0
CMS3_k127_1472350_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000007832 241.0
CMS3_k127_1472350_4 Peptidoglycan-binding protein, CsiV - - - 0.00000000000004273 83.0
CMS3_k127_1472444_0 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 334.0
CMS3_k127_1472444_1 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000001044 234.0
CMS3_k127_1472444_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000001393 110.0
CMS3_k127_1472444_3 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000002427 104.0
CMS3_k127_1472444_4 - - - - 0.0000000000000000000002321 108.0
CMS3_k127_1482230_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1133.0
CMS3_k127_1482230_1 Glutamate-1-semialdehyde aminotransferase K01845 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 8.236e-218 681.0
CMS3_k127_1482230_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 364.0
CMS3_k127_1482230_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001056 264.0
CMS3_k127_1482230_4 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000000000002665 216.0
CMS3_k127_1482230_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000001417 200.0
CMS3_k127_1482230_6 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000003125 197.0
CMS3_k127_1482230_7 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000002063 117.0
CMS3_k127_1482230_8 Domain of unknown function (DUF5063) - - - 0.000000000000000149 87.0
CMS3_k127_1482230_9 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000128 54.0
CMS3_k127_1485894_0 OmpA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.0000000000000000000000002949 107.0
CMS3_k127_1486867_0 Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 546.0
CMS3_k127_1486867_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 462.0
CMS3_k127_1486867_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006442 238.0
CMS3_k127_1486867_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000000000000000000000007447 174.0
CMS3_k127_1486867_4 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000293 157.0
CMS3_k127_1486867_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000001583 153.0
CMS3_k127_1486867_6 Peptidase C13 family - - - 0.0000000000000000000001591 102.0
CMS3_k127_1486867_7 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.000000000004641 72.0
CMS3_k127_1487195_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1024.0
CMS3_k127_1487195_1 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000000000000000000000000000000000000002017 171.0
CMS3_k127_1487195_2 transcriptional regulator K18831 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000008473 143.0
CMS3_k127_1491187_0 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000004522 230.0
CMS3_k127_1491187_1 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000002596 204.0
CMS3_k127_1491187_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000001208 153.0
CMS3_k127_1491187_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.000000000004958 71.0
CMS3_k127_1493045_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 508.0
CMS3_k127_1493045_1 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 372.0
CMS3_k127_1493045_2 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 315.0
CMS3_k127_1493045_3 Histidine triad (Hit) protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001141 258.0
CMS3_k127_1493045_4 - - - - 0.00000000000000000000000000000000000000000000000000000000005134 207.0
CMS3_k127_1494122_0 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 1.044e-244 764.0
CMS3_k127_1494122_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 515.0
CMS3_k127_1494122_2 Belongs to the GARS family K01945,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 293.0
CMS3_k127_1494122_3 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000006242 182.0
CMS3_k127_1494122_4 Mj0042 family finger-like - - - 0.00000000000000000000000000004437 133.0
CMS3_k127_1494122_5 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.0000000000000000000003614 98.0
CMS3_k127_1494122_6 TIGRFAM MJ0042 family finger-like protein - - - 0.000000706 62.0
CMS3_k127_149797_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 9.851e-253 796.0
CMS3_k127_149797_1 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 451.0
CMS3_k127_149797_2 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000162 272.0
CMS3_k127_149797_3 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000125 192.0
CMS3_k127_149797_4 cold-shock protein K03704 - - 0.00000000000000000000000000002254 119.0
CMS3_k127_149797_5 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000003928 104.0
CMS3_k127_149918_0 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 302.0
CMS3_k127_149918_1 Hsp20/alpha crystallin family K04080 - - 0.0000000000000000000000000000000000000000000000000000000004509 205.0
CMS3_k127_149918_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000001811 143.0
CMS3_k127_149918_3 BRO family, N-terminal domain - - - 0.0000000000000002588 81.0
CMS3_k127_1502210_0 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon - GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000003971 240.0
CMS3_k127_1502210_1 protein conserved in archaea - - - 0.00000000000000000000000000000000000000000000000000008921 188.0
CMS3_k127_1502210_2 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000004333 135.0
CMS3_k127_1512792_0 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 356.0
CMS3_k127_1512792_1 PFAM pfkB family carbohydrate kinase K00846 - 2.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000004194 261.0
CMS3_k127_1524509_0 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 9.581e-217 693.0
CMS3_k127_1524509_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 GO:0003674,GO:0003824,GO:0006935,GO:0008150,GO:0008984,GO:0009605,GO:0016787,GO:0016788,GO:0040011,GO:0042221,GO:0042330,GO:0050896,GO:0051723,GO:0052689,GO:0140096 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 374.0
CMS3_k127_1524509_2 this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.0000000000000000000000000000000000000000000000000000009449 199.0
CMS3_k127_1535489_0 alanine symporter K03310 - - 1.237e-204 644.0
CMS3_k127_1535489_1 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005778 246.0
CMS3_k127_1535489_2 Phosphorylase superfamily K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000007776 243.0
CMS3_k127_1535489_3 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000002625 140.0
CMS3_k127_1535489_4 - - - - 0.00000000000000000000000002608 119.0
CMS3_k127_1535489_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000004256 80.0
CMS3_k127_1535489_6 - - - - 0.000000000001043 72.0
CMS3_k127_1556207_0 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003573 254.0
CMS3_k127_1556207_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000008425 165.0
CMS3_k127_1556207_2 - - - - 0.0000000000000000000000000000000000000007319 153.0
CMS3_k127_1556207_3 guanyl-nucleotide exchange factor activity K00799,K04097 GO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643 2.5.1.18,5.3.99.2 0.00000000000000000000000000000000002009 141.0
CMS3_k127_1627305_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 556.0
CMS3_k127_1627305_1 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 368.0
CMS3_k127_1627305_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 357.0
CMS3_k127_1627305_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000002721 212.0
CMS3_k127_1627305_4 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000003116 160.0
CMS3_k127_1645321_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 501.0
CMS3_k127_1645321_1 Uncharacterised protein family (UPF0014) K02069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000256 271.0
CMS3_k127_1645321_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006187 235.0
CMS3_k127_1645321_3 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000000000000000008597 220.0
CMS3_k127_1645321_4 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000001071 218.0
CMS3_k127_1645321_5 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000003971 165.0
CMS3_k127_1645321_6 - - - - 0.000000000000000000000000000000000000659 146.0
CMS3_k127_1645321_7 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.0000000000000000000000000000001497 127.0
CMS3_k127_165520_0 histidine kinase HAMP region domain protein K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 433.0
CMS3_k127_165520_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000001357 211.0
CMS3_k127_165520_2 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000007759 196.0
CMS3_k127_165520_3 - - - - 0.0000000000000000000005813 99.0
CMS3_k127_165520_4 Belongs to the ompA family K03640 - - 0.00000000000004861 81.0
CMS3_k127_165520_5 - - - - 0.00009516 52.0
CMS3_k127_1656715_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 527.0
CMS3_k127_1656715_1 heptosyltransferase K12982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007149 268.0
CMS3_k127_1656715_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000001151 218.0
CMS3_k127_1656715_3 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.00000000000000000000000000000009151 127.0
CMS3_k127_1661098_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 502.0
CMS3_k127_1661098_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000598 254.0
CMS3_k127_1661098_2 Ankyrin repeat - - - 0.000000000000000000000000000000002358 140.0
CMS3_k127_1664461_0 Outer membrane protein beta-barrel family K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 487.0
CMS3_k127_1664461_2 His Kinase A (phosphoacceptor) domain - - - 0.000000001597 67.0
CMS3_k127_1669397_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 574.0
CMS3_k127_1669397_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000001695 237.0
CMS3_k127_1669397_2 Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000002882 170.0
CMS3_k127_1669397_3 Belongs to the Fur family K03711 - - 0.00000000000000000000000000001014 119.0
CMS3_k127_1669397_4 RnfH family Ubiquitin K09801 - - 0.0000000000000000000000000009582 115.0
CMS3_k127_1669397_5 SmpA / OmlA family K06186 - - 0.00000000000000000001169 94.0
CMS3_k127_168366_0 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 289.0
CMS3_k127_168366_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001335 265.0
CMS3_k127_168366_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000002419 180.0
CMS3_k127_168366_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000008632 148.0
CMS3_k127_168366_4 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000984 111.0
CMS3_k127_1714769_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 609.0
CMS3_k127_1714769_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 444.0
CMS3_k127_1714769_2 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000001009 267.0
CMS3_k127_1714769_3 protein involved in exopolysaccharide biosynthesis K16692 GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0031224,GO:0036211,GO:0038083,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.000000000000000000000000000003096 122.0
CMS3_k127_1722576_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 507.0
CMS3_k127_1722576_1 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 291.0
CMS3_k127_1722576_2 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 286.0
CMS3_k127_1722576_3 Part of a membrane complex involved in electron transport K03615 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 - 0.0000000003495 62.0
CMS3_k127_173324_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586 - 4.1.1.17,4.1.1.20 2.475e-202 640.0
CMS3_k127_173324_1 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 578.0
CMS3_k127_173324_2 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 418.0
CMS3_k127_173324_3 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000002303 86.0
CMS3_k127_1734817_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000645 162.0
CMS3_k127_1734817_1 Vitamin K-dependent gamma-carboxylase - - - 0.00000000000000000000000000000000002211 151.0
CMS3_k127_1734817_2 Transposase DDE domain K07487 - - 0.0009687 42.0
CMS3_k127_1742767_0 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 576.0
CMS3_k127_1742767_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002604 264.0
CMS3_k127_1742767_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000174 56.0
CMS3_k127_1766684_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000005036 233.0
CMS3_k127_1766684_1 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000002415 213.0
CMS3_k127_1766684_2 Nucleotidyltransferase - - - 0.0000000000000000000000000000000000000000000000000001509 198.0
CMS3_k127_1776180_0 Protein of unknown function, DUF255 K06888 - - 6.223e-255 803.0
CMS3_k127_1776180_1 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 484.0
CMS3_k127_1776180_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 480.0
CMS3_k127_1776180_3 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 412.0
CMS3_k127_1776180_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 387.0
CMS3_k127_1776180_5 Glycine cleavage system P-protein K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000001075 235.0
CMS3_k127_1776180_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000247 147.0
CMS3_k127_1776180_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000005288 108.0
CMS3_k127_1782178_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 387.0
CMS3_k127_1782178_1 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000002771 252.0
CMS3_k127_1782178_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000007171 233.0
CMS3_k127_1782178_4 Cupin domain - - - 0.000000000006684 73.0
CMS3_k127_1813584_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 576.0
CMS3_k127_1813584_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 468.0
CMS3_k127_1813584_10 - - - - 0.0000000000002137 77.0
CMS3_k127_1813584_2 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 374.0
CMS3_k127_1813584_3 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 370.0
CMS3_k127_1813584_4 ketosteroid isomerase - - - 0.000000000000000000000000000000000000000000000000000000000005536 214.0
CMS3_k127_1813584_5 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000001055 185.0
CMS3_k127_1813584_6 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000004465 145.0
CMS3_k127_1813584_7 Hydrogenase maturation protease - - - 0.00000000000000000003315 96.0
CMS3_k127_1813584_8 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.000000000000000002261 89.0
CMS3_k127_1813584_9 cAMP-dependent protein kinase regulatory subunit Cgs1 K04739 GO:0000003,GO:0000166,GO:0000228,GO:0000785,GO:0000790,GO:0001932,GO:0001933,GO:0002831,GO:0002832,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005886,GO:0005952,GO:0006469,GO:0006950,GO:0006979,GO:0007154,GO:0008104,GO:0008150,GO:0008277,GO:0008603,GO:0009266,GO:0009267,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010563,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0016020,GO:0017076,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0019954,GO:0022603,GO:0023051,GO:0023057,GO:0030154,GO:0030234,GO:0030291,GO:0030435,GO:0030436,GO:0030447,GO:0030448,GO:0030551,GO:0030552,GO:0030554,GO:0031279,GO:0031281,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032268,GO:0032269,GO:0032386,GO:0032388,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033554,GO:0033673,GO:0034305,GO:0034599,GO:0034605,GO:0034613,GO:0036094,GO:0036170,GO:0036180,GO:0040007,GO:0040008,GO:0042173,GO:0042221,GO:0042325,GO:0042326,GO:0042594,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043934,GO:0043936,GO:0043937,GO:0043938,GO:0043943,GO:0043945,GO:0043949,GO:0043951,GO:0044092,GO:0044093,GO:0044182,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045595,GO:0045597,GO:0045744,GO:0045761,GO:0045762,GO:0045786,GO:0045859,GO:0045881,GO:0045926,GO:0045936,GO:0046578,GO:0046580,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051056,GO:0051058,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051246,GO:0051248,GO:0051338,GO:0051339,GO:0051348,GO:0051349,GO:0051445,GO:0051447,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060255,GO:0060258,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070727,GO:0070887,GO:0071496,GO:0071900,GO:0071901,GO:0071944,GO:0080090,GO:0080134,GO:0090087,GO:0090316,GO:0097159,GO:0097271,GO:0097367,GO:0098772,GO:0106070,GO:0106072,GO:0110033,GO:0110034,GO:1900428,GO:1900429,GO:1900434,GO:1900435,GO:1900443,GO:1900444,GO:1901265,GO:1901363,GO:1902531,GO:1902532,GO:1902659,GO:1902660,GO:1903664,GO:1903666,GO:1903827,GO:1903829,GO:1904951,GO:2000241,GO:2000242,GO:2000479,GO:2000480 - 0.00000000000002652 83.0
CMS3_k127_1828158_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1424.0
CMS3_k127_1828158_1 E1-E2 ATPase K17686 - 3.6.3.54 2.354e-233 744.0
CMS3_k127_1828158_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 579.0
CMS3_k127_1828158_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 323.0
CMS3_k127_1828158_4 Predicted membrane protein (DUF2231) - - - 0.0000000000000000000000000000000000000000000000000001017 194.0
CMS3_k127_1828158_5 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000004198 187.0
CMS3_k127_1828158_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000003242 136.0
CMS3_k127_1828158_7 Heavy-metal-associated domain K17686 GO:0000041,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010272,GO:0010273,GO:0015075,GO:0015080,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035434,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046688,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060003,GO:0061687,GO:0070887,GO:0071241,GO:0071248,GO:0071280,GO:0071292,GO:0071944,GO:0090662,GO:0097501,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0099131,GO:1902601,GO:1990169 3.6.3.54 0.00000001646 58.0
CMS3_k127_1917384_0 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000179 278.0
CMS3_k127_1917384_1 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001162 272.0
CMS3_k127_1917384_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000001299 248.0
CMS3_k127_1924924_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 429.0
CMS3_k127_1924924_1 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 342.0
CMS3_k127_1924924_2 phosphate starvation-inducible protein PhoH K06217 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000366 257.0
CMS3_k127_1924924_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000001208 172.0
CMS3_k127_1929958_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 347.0
CMS3_k127_1929958_1 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 342.0
CMS3_k127_1929958_2 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000006663 223.0
CMS3_k127_1929958_3 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000004263 181.0
CMS3_k127_1929958_4 DoxX K15977 - - 0.0000000000000000000000000000000000000000000004334 171.0
CMS3_k127_1929958_5 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000001668 165.0
CMS3_k127_1929958_6 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000008665 100.0
CMS3_k127_1929958_7 Putative zinc-finger - - - 0.000003869 56.0
CMS3_k127_1933317_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 489.0
CMS3_k127_1933317_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004495 253.0
CMS3_k127_1933317_2 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003725 245.0
CMS3_k127_1933317_3 phosphohistidine phosphatase, SixA - - - 0.000000000000000000000000000000000000002597 154.0
CMS3_k127_1942005_0 pdz dhr glgf - - - 3.295e-208 662.0
CMS3_k127_1942005_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000007827 99.0
CMS3_k127_1950202_0 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 441.0
CMS3_k127_1950202_1 HEAT repeat - - - 0.000000000000000000007085 109.0
CMS3_k127_1950202_2 Protein of unknown function (DUF3135) - - - 0.00000000000000001051 87.0
CMS3_k127_1950202_3 heat shock protein binding K05516,K05801,K18481 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.00007938 55.0
CMS3_k127_1950202_4 Abc transporter K11004 - - 0.000172 49.0
CMS3_k127_1981485_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 8.799e-206 647.0
CMS3_k127_1981485_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.068e-200 631.0
CMS3_k127_1981485_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009888 337.0
CMS3_k127_1981485_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 306.0
CMS3_k127_1981485_4 toluene tolerance family protein K07323 - - 0.0000000000000000000000000000000000000006389 156.0
CMS3_k127_1981485_5 Aminotransferase class I and II K00817 GO:0000105,GO:0003674,GO:0003824,GO:0004400,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9 0.00000000000000000000000000000000000465 139.0
CMS3_k127_1981485_6 Belongs to the BolA IbaG family - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000009495 96.0
CMS3_k127_1981485_7 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000000001856 83.0
CMS3_k127_2053306_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 1.105e-221 698.0
CMS3_k127_2053306_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.555e-200 631.0
CMS3_k127_2053306_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000001724 209.0
CMS3_k127_2060725_0 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 550.0
CMS3_k127_2060725_1 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 450.0
CMS3_k127_2060725_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 312.0
CMS3_k127_2060725_3 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001786 259.0
CMS3_k127_2060725_4 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 251.0
CMS3_k127_2060725_5 PFAM transport-associated - - - 0.000000000000000000000000000000000000000002894 163.0
CMS3_k127_2060725_6 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000004696 117.0
CMS3_k127_2060725_7 Molecular chaperone. Has ATPase activity K04079 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006974,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 - 0.00000000000000000000000003094 109.0
CMS3_k127_2060725_8 LppC putative lipoprotein - - - 0.00001043 51.0
CMS3_k127_2062837_0 Diguanylate cyclase - - - 5.286e-200 654.0
CMS3_k127_2062837_1 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002689 282.0
CMS3_k127_2062837_2 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000001601 227.0
CMS3_k127_2062837_3 Transcriptional regulator crp fnr family K10914 - - 0.000000000000000000000000000000000000000005307 164.0
CMS3_k127_2062837_4 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000004581 104.0
CMS3_k127_2063712_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.003e-219 687.0
CMS3_k127_2063712_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 428.0
CMS3_k127_2063712_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 337.0
CMS3_k127_2063712_3 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000007039 207.0
CMS3_k127_2063851_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 417.0
CMS3_k127_2063851_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000007529 235.0
CMS3_k127_2063851_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000034 230.0
CMS3_k127_2064421_0 ABC transporter K15738 - - 2.223e-202 648.0
CMS3_k127_2064421_1 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 435.0
CMS3_k127_2064421_2 response regulator, receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000001019 208.0
CMS3_k127_2079551_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 1.153e-242 761.0
CMS3_k127_2079551_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 8.152e-213 668.0
CMS3_k127_2079551_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007067 274.0
CMS3_k127_2079551_3 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001531 266.0
CMS3_k127_2079551_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000006099 226.0
CMS3_k127_2079551_5 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000009507 218.0
CMS3_k127_2079551_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 GO:0000166,GO:0003674,GO:0003824,GO:0004733,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009443,GO:0009987,GO:0010181,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0032553,GO:0032991,GO:0034641,GO:0036094,GO:0042301,GO:0042364,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043094,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902444 1.4.3.5 0.0002677 46.0
CMS3_k127_2097831_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.918e-298 930.0
CMS3_k127_2097831_1 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 575.0
CMS3_k127_2097831_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 511.0
CMS3_k127_2097831_3 F plasmid transfer operon, TraF, protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 307.0
CMS3_k127_2097831_4 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000002143 201.0
CMS3_k127_2097831_5 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000004032 186.0
CMS3_k127_2097831_6 Phosphate-starvation-inducible E K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000001799 123.0
CMS3_k127_20979_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 617.0
CMS3_k127_20979_1 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000006687 258.0
CMS3_k127_2102476_0 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000005542 163.0
CMS3_k127_2104878_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1112.0
CMS3_k127_2104878_1 TIGRFAM nitrite reductase NAD(P)H , large subunit K00362 - 1.7.1.15 0.0 1017.0
CMS3_k127_2104878_2 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000001503 214.0
CMS3_k127_2104878_3 Nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.00000000000000000000000000000000000000000001542 163.0
CMS3_k127_2111902_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.702e-218 685.0
CMS3_k127_2111902_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 484.0
CMS3_k127_2111902_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000006754 163.0
CMS3_k127_2111902_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000003847 139.0
CMS3_k127_2111902_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000001714 97.0
CMS3_k127_2111902_13 Ribosomal protein L30 K02907 - - 0.000000000000000000002363 94.0
CMS3_k127_2111902_14 Ribosomal protein L36 K02919 - - 0.00000000000002838 72.0
CMS3_k127_2111902_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 299.0
CMS3_k127_2111902_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
CMS3_k127_2111902_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001134 250.0
CMS3_k127_2111902_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000009043 227.0
CMS3_k127_2111902_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000003666 221.0
CMS3_k127_2111902_7 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002979 199.0
CMS3_k127_2111902_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 - 0.00000000000000000000000000000000000000000000000000004789 189.0
CMS3_k127_2111902_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000008012 188.0
CMS3_k127_2120698_0 Domain of unknown function (DUF4188) - - - 0.00000000000000000000000000000000000000000000000000000000001282 210.0
CMS3_k127_2120698_1 copper resistance K07233 - - 0.000000000000000000000000000000000000000000000000004336 183.0
CMS3_k127_2120698_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000001754 155.0
CMS3_k127_2120698_3 Methyltransferase type 11 - - - 0.000000000001482 70.0
CMS3_k127_2120698_6 Methyltransferase domain - - - 0.0007178 45.0
CMS3_k127_2120698_7 ubiE/COQ5 methyltransferase family - - - 0.000945 43.0
CMS3_k127_2151893_0 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 302.0
CMS3_k127_2151893_1 COG1309 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000005607 205.0
CMS3_k127_2151893_2 Domain of unknown function (DUF4396) - - - 0.0000000000000000000000000000000000000000000000000003497 188.0
CMS3_k127_2151893_3 helix_turn_helix, mercury resistance K19591,K19592 - - 0.0000000000000000000000000000000000000000000000001616 180.0
CMS3_k127_2152475_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 9.535e-296 919.0
CMS3_k127_2152475_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000007416 256.0
CMS3_k127_2152475_2 - - - - 0.00000000000000000000000000005161 120.0
CMS3_k127_2152475_3 GAF PAS GGDEF domain-containing protein - - - 0.00000000000000000000006955 104.0
CMS3_k127_2152475_4 Cysteine-rich CPXCG - - - 0.00000000000000002147 84.0
CMS3_k127_2153630_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000001163 210.0
CMS3_k127_2153630_1 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000002759 196.0
CMS3_k127_2153630_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000005249 168.0
CMS3_k127_2168153_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 581.0
CMS3_k127_2168153_1 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 496.0
CMS3_k127_2168153_2 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000004847 125.0
CMS3_k127_2168153_3 RNA recognition motif - - - 0.000000000000000000000002974 104.0
CMS3_k127_2168153_4 - - - - 0.000005658 49.0
CMS3_k127_219680_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 479.0
CMS3_k127_219680_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000995 282.0
CMS3_k127_219680_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000001288 213.0
CMS3_k127_219680_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001319 196.0
CMS3_k127_2198881_0 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000156 273.0
CMS3_k127_2198881_1 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000005066 227.0
CMS3_k127_2198881_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000002867 182.0
CMS3_k127_2198881_3 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000001696 152.0
CMS3_k127_2198881_4 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000009017 145.0
CMS3_k127_2198881_5 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000002514 135.0
CMS3_k127_2198881_6 - - - - 0.000000000001521 71.0
CMS3_k127_2198881_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000001261 59.0
CMS3_k127_2227622_0 PrkA family serine protein kinase K07180 - - 0.0 1095.0
CMS3_k127_2227622_1 SpoVR family K06415 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 3.625e-255 794.0
CMS3_k127_2227622_2 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 540.0
CMS3_k127_2227622_3 Vitamin K-dependent gamma-carboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 470.0
CMS3_k127_2227622_4 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 - 1.8.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 375.0
CMS3_k127_2227622_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000745 230.0
CMS3_k127_2227622_6 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000001808 150.0
CMS3_k127_2252202_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 538.0
CMS3_k127_2252202_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 537.0
CMS3_k127_2252202_2 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 421.0
CMS3_k127_231813_0 PFAM short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 313.0
CMS3_k127_231813_1 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003352 248.0
CMS3_k127_231813_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000006542 230.0
CMS3_k127_231813_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000002508 206.0
CMS3_k127_231813_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 GO:0003674,GO:0003824,GO:0004150,GO:0005488,GO:0005515,GO:0016829,GO:0016830,GO:0016832,GO:0042802 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000001249 175.0
CMS3_k127_231813_5 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000000000003603 160.0
CMS3_k127_231813_6 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000004887 110.0
CMS3_k127_231813_7 - - - - 0.00000000000002618 74.0
CMS3_k127_2417325_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 549.0
CMS3_k127_2417325_1 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 505.0
CMS3_k127_2417325_2 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 415.0
CMS3_k127_2495996_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1384.0
CMS3_k127_2495996_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000008223 201.0
CMS3_k127_2495996_2 Diguanylate cyclase - - - 0.00000000000000000000000000005319 126.0
CMS3_k127_2500886_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 508.0
CMS3_k127_2500886_1 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 302.0
CMS3_k127_2500886_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 308.0
CMS3_k127_2500886_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 293.0
CMS3_k127_2500886_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000001322 226.0
CMS3_k127_2500886_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000001102 135.0
CMS3_k127_2500886_6 cheY-homologous receiver domain - - - 0.000000000000000000000000006062 120.0
CMS3_k127_2500886_7 alanine dehydrogenase K00259 - 1.4.1.1 0.0000000000000000001776 91.0
CMS3_k127_2501471_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 5.495e-224 702.0
CMS3_k127_2501471_1 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 298.0
CMS3_k127_2501471_2 Protein of unknown function (DUF3187) - - - 0.00000000000000000000000000000000000000000000000000001036 200.0
CMS3_k127_2501471_3 COG3279 Response regulator of the LytR AlgR family K08083 - - 0.000000232 53.0
CMS3_k127_2511910_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 445.0
CMS3_k127_2511910_1 PFAM Ion transport K08714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 345.0
CMS3_k127_2511910_2 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 314.0
CMS3_k127_2511910_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003613 286.0
CMS3_k127_2511910_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000106 263.0
CMS3_k127_2511910_5 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000004647 148.0
CMS3_k127_2511910_6 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000141 93.0
CMS3_k127_2511910_7 PilZ domain - - - 0.00003042 50.0
CMS3_k127_2526403_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1044.0
CMS3_k127_2526403_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 481.0
CMS3_k127_2526403_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 421.0
CMS3_k127_2526403_3 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 396.0
CMS3_k127_2526403_4 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 297.0
CMS3_k127_2526403_5 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000000000000007291 226.0
CMS3_k127_2526403_6 lipoprotein K07287 - - 0.00008589 53.0
CMS3_k127_2563250_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 408.0
CMS3_k127_2563250_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000006546 150.0
CMS3_k127_2563250_2 MgtE intracellular N domain K06213 - - 0.00000000000002165 83.0
CMS3_k127_2563250_3 Conserved TM helix - - - 0.0000743 53.0
CMS3_k127_2572611_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1395.0
CMS3_k127_2572611_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 477.0
CMS3_k127_2572611_2 LysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 352.0
CMS3_k127_2572611_3 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000003145 192.0
CMS3_k127_2572611_4 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.0000000000000000000001143 99.0
CMS3_k127_2603998_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 457.0
CMS3_k127_2603998_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000502 248.0
CMS3_k127_2603998_2 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000003595 182.0
CMS3_k127_2603998_3 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000003351 145.0
CMS3_k127_2603998_4 PilZ domain - - - 0.00000000000004106 78.0
CMS3_k127_2608834_0 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 520.0
CMS3_k127_2608834_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 345.0
CMS3_k127_2608834_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003355 249.0
CMS3_k127_2608834_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000007967 136.0
CMS3_k127_2608834_4 Cytochrome c - - - 0.00000006252 58.0
CMS3_k127_2636523_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 2.468e-248 774.0
CMS3_k127_2636523_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 515.0
CMS3_k127_2636523_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 291.0
CMS3_k127_2636523_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000003604 246.0
CMS3_k127_2636523_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000003072 166.0
CMS3_k127_2669452_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 443.0
CMS3_k127_2669452_1 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 401.0
CMS3_k127_2669452_2 Kef-type K transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 396.0
CMS3_k127_2669452_3 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000006109 193.0
CMS3_k127_2669452_4 - - - - 0.000000000000000000007122 94.0
CMS3_k127_26791_0 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000001409 207.0
CMS3_k127_26791_1 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000005075 81.0
CMS3_k127_26791_2 glycolate biosynthetic process - - - 0.00000000005688 68.0
CMS3_k127_26791_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K04496 - 1.1.1.399,1.1.1.95 0.000004933 49.0
CMS3_k127_2683074_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 485.0
CMS3_k127_2683074_1 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 339.0
CMS3_k127_2690773_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 593.0
CMS3_k127_2690773_1 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 508.0
CMS3_k127_2690773_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 GO:0003674,GO:0003824,GO:0003991,GO:0004042,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0033554,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 456.0
CMS3_k127_2690773_3 membrane transporter protein K07090,K11312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 356.0
CMS3_k127_2690773_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 GO:0003674,GO:0003824,GO:0004588,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 286.0
CMS3_k127_2690773_5 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004099 276.0
CMS3_k127_2690773_6 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000002145 250.0
CMS3_k127_2690773_7 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000007039 157.0
CMS3_k127_2739796_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 2.205e-208 658.0
CMS3_k127_2739796_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 584.0
CMS3_k127_2739796_2 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000003887 234.0
CMS3_k127_2739796_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000003872 233.0
CMS3_k127_280906_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 347.0
CMS3_k127_280906_1 YfaZ precursor - - - 0.0000000000007326 72.0
CMS3_k127_280906_2 Domain of unknown function (DUF4136) - - - 0.0000000001068 69.0
CMS3_k127_280906_3 membrane - - - 0.0000001453 59.0
CMS3_k127_280906_4 EF hand - - - 0.00003223 51.0
CMS3_k127_2843549_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.517e-239 747.0
CMS3_k127_2843549_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 402.0
CMS3_k127_2843549_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 291.0
CMS3_k127_2843549_3 diguanylate cyclase - - - 0.0000000000000000000000000000003237 128.0
CMS3_k127_2867420_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 496.0
CMS3_k127_2867420_1 - - - - 0.00000000000000008578 94.0
CMS3_k127_2878209_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 9.305e-272 866.0
CMS3_k127_2878209_1 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000001802 194.0
CMS3_k127_2878209_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000001135 137.0
CMS3_k127_2878209_3 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000000000001224 137.0
CMS3_k127_2878209_4 Pas domain K03406 - - 0.0000000000000000000000000009978 124.0
CMS3_k127_2890209_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1251.0
CMS3_k127_2890209_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.987e-247 796.0
CMS3_k127_2890209_10 - - - - 0.0002089 49.0
CMS3_k127_2890209_2 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 GO:0003674,GO:0003824,GO:0004357,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0009058,GO:0009628,GO:0009987,GO:0010035,GO:0010038,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042221,GO:0042398,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046685,GO:0046689,GO:0046872,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0070887,GO:0071241,GO:0071243,GO:0071248,GO:0071288,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 567.0
CMS3_k127_2890209_3 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 510.0
CMS3_k127_2890209_4 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 350.0
CMS3_k127_2890209_5 MltA-interacting protein MipA - - - 0.0000000000000000000000000000000000000000000000000000000000000007472 232.0
CMS3_k127_2890209_6 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000007395 186.0
CMS3_k127_2890209_7 Belongs to the UPF0225 family K09858 - - 0.0000000000000000000000000000000000000000001477 164.0
CMS3_k127_2890209_8 - - - - 0.000000000000000000000000007939 115.0
CMS3_k127_2890209_9 cell redox homeostasis K03671 - - 0.0000000000000000000000001057 112.0
CMS3_k127_289420_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.671e-207 659.0
CMS3_k127_289420_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 548.0
CMS3_k127_289420_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 446.0
CMS3_k127_289420_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 430.0
CMS3_k127_289420_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 413.0
CMS3_k127_289420_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 404.0
CMS3_k127_289420_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006703 377.0
CMS3_k127_289420_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000001387 257.0
CMS3_k127_289420_8 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000003583 168.0
CMS3_k127_289420_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000001506 81.0
CMS3_k127_2933815_0 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 7.31e-275 848.0
CMS3_k127_2933815_1 Cytochrome C oxidase, mono-heme subunit/FixO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 411.0
CMS3_k127_2933815_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001632 233.0
CMS3_k127_2933815_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000004325 183.0
CMS3_k127_2933815_4 - - - - 0.0000000000000000000000000000000000007024 144.0
CMS3_k127_2933815_6 - - - - 0.000000000000000000000001514 106.0
CMS3_k127_2933815_7 - - - - 0.000000000000000000002015 96.0
CMS3_k127_2933815_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000005553 64.0
CMS3_k127_2933815_9 - - - - 0.0000000194 59.0
CMS3_k127_2941418_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 3.187e-288 896.0
CMS3_k127_2941418_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 544.0
CMS3_k127_2941418_2 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 359.0
CMS3_k127_2941418_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000009951 246.0
CMS3_k127_2941418_4 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000002445 146.0
CMS3_k127_2941418_5 Rhodanese Homology Domain - - - 0.00000000000000000000000002375 111.0
CMS3_k127_2941418_6 Rhodanese Homology Domain - - - 0.00000000000001364 78.0
CMS3_k127_2941418_7 Phosphoribosylformylglycinamidine cyclo-ligase K01933 GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1 0.000000001274 60.0
CMS3_k127_2946026_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 570.0
CMS3_k127_2946026_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 357.0
CMS3_k127_2946026_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000002729 227.0
CMS3_k127_2946026_3 Type II secretory pathway, component ExeA - - - 0.000000000000000000000000000000000000000000000008578 187.0
CMS3_k127_2946026_4 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.00000000000000000000000000000000000004504 153.0
CMS3_k127_2946026_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000004644 96.0
CMS3_k127_3000145_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007945 247.0
CMS3_k127_3000145_1 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000003558 138.0
CMS3_k127_3000145_2 transcriptional regulator - - - 0.0001032 45.0
CMS3_k127_300259_0 PFAM TrkA-N domain K03499 - - 3.033e-222 696.0
CMS3_k127_300259_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 5.569e-218 685.0
CMS3_k127_300259_10 - - - - 0.000000000000003747 77.0
CMS3_k127_300259_2 signal transduction histidine kinase - - - 1.601e-212 682.0
CMS3_k127_300259_3 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 459.0
CMS3_k127_300259_4 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 351.0
CMS3_k127_300259_5 Transcriptional regulator K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 331.0
CMS3_k127_300259_6 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002835 279.0
CMS3_k127_300259_7 PFAM Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000004068 196.0
CMS3_k127_300259_8 Sel1 repeat protein K07126 - - 0.00000000000000000000000000000001542 139.0
CMS3_k127_300259_9 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000003904 123.0
CMS3_k127_3003802_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.455e-263 819.0
CMS3_k127_3003802_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 498.0
CMS3_k127_3003802_2 HflC and HflK could encode or regulate a protease K04088 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 391.0
CMS3_k127_3003802_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 380.0
CMS3_k127_3003802_4 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 338.0
CMS3_k127_3003802_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000001086 273.0
CMS3_k127_3003802_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000002206 198.0
CMS3_k127_3003802_7 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000009504 161.0
CMS3_k127_3003802_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000002646 141.0
CMS3_k127_3003802_9 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000002165 66.0
CMS3_k127_30147_0 NnrU protein - - - 0.00000000000000000000000000000000000000000000000000000000000000038 225.0
CMS3_k127_30147_1 PAS PAC sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000304 142.0
CMS3_k127_3029721_0 UPF0126 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 351.0
CMS3_k127_3029721_1 HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
CMS3_k127_3029721_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 319.0
CMS3_k127_3029721_3 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000408 215.0
CMS3_k127_3051086_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 495.0
CMS3_k127_3051086_1 Diguanylate cyclase K13069,K21021 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.00000000000000003149 94.0
CMS3_k127_3051086_2 His Kinase A (phosphoacceptor) domain - - - 0.0000005304 61.0
CMS3_k127_3051086_3 Domain of Unknown Function (DUF349) - - - 0.00001089 53.0
CMS3_k127_3051748_0 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 352.0
CMS3_k127_3051748_1 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000687 207.0
CMS3_k127_3051748_2 Protoglobin K13590,K21019 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000007714 206.0
CMS3_k127_3051748_3 PFAM ABC-type uncharacterised transport system - - - 0.00000000000000000000000001547 114.0
CMS3_k127_3062193_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 9.013e-223 696.0
CMS3_k127_3062193_1 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 574.0
CMS3_k127_3062193_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 451.0
CMS3_k127_3062193_3 Trypsin-like peptidase domain - - - 0.0000000006331 68.0
CMS3_k127_3112655_0 Domain of unknown function (DUF1963) - - - 0.000000000000000000000000006587 121.0
CMS3_k127_3112655_1 RHS Repeat - - - 0.00003002 48.0
CMS3_k127_3115946_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.036e-202 646.0
CMS3_k127_3115946_1 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 492.0
CMS3_k127_3115946_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001886 279.0
CMS3_k127_3115946_3 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002134 276.0
CMS3_k127_3115946_4 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000001965 134.0
CMS3_k127_3115946_5 - - - - 0.00000000000000000000005749 102.0
CMS3_k127_3122713_0 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 238.0
CMS3_k127_3122713_1 - - - - 0.0000000000000000000000000000000000002136 145.0
CMS3_k127_3122713_2 DsrC like protein K11179 - - 0.000000000000003806 80.0
CMS3_k127_3122713_4 Nuclease-related domain - - - 0.00000002945 57.0
CMS3_k127_3122713_5 AAA domain - - - 0.00000005197 55.0
CMS3_k127_3122713_7 tRNA 3'-terminal CCA addition - - - 0.00005941 48.0
CMS3_k127_3130516_0 Belongs to the RtcB family K14415 - 6.5.1.3 2.944e-199 626.0
CMS3_k127_3130516_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 344.0
CMS3_k127_3130516_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002181 246.0
CMS3_k127_3130516_3 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000002173 118.0
CMS3_k127_3130516_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000003974 106.0
CMS3_k127_3130516_5 HIT domain - - - 0.00000000000000000007033 95.0
CMS3_k127_313356_0 FAD linked oxidase K00104 - 1.1.3.15 6.742e-232 726.0
CMS3_k127_313356_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 445.0
CMS3_k127_313356_2 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 369.0
CMS3_k127_313356_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000312 142.0
CMS3_k127_313356_4 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000005158 137.0
CMS3_k127_3149237_0 sigma54 specific, transcriptional regulator, Fis family K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 540.0
CMS3_k127_3149237_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 531.0
CMS3_k127_3149237_2 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K10942 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 295.0
CMS3_k127_3151478_0 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 320.0
CMS3_k127_3151478_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 301.0
CMS3_k127_3151478_2 RimK-like ATP-grasp domain K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000009198 232.0
CMS3_k127_3169148_0 Part of a membrane complex involved in electron transport K03615 - - 1.605e-212 667.0
CMS3_k127_3169148_1 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 427.0
CMS3_k127_3169148_2 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000003815 221.0
CMS3_k127_3169148_3 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000004706 189.0
CMS3_k127_3179887_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 612.0
CMS3_k127_3179887_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 589.0
CMS3_k127_3179887_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 516.0
CMS3_k127_3179887_3 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 315.0
CMS3_k127_3179887_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000002126 175.0
CMS3_k127_3179887_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000003411 155.0
CMS3_k127_3179887_6 cell division protein K03466 - - 0.00000000000000000114 85.0
CMS3_k127_3179887_7 HD domain - - - 0.00002533 48.0
CMS3_k127_3183022_0 ERAD pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001979 264.0
CMS3_k127_3183022_1 PFAM cytochrome c class I K08738 - - 0.0000000000000000000001053 105.0
CMS3_k127_3183022_2 outer membrane lipoprotein - - - 0.0000000000000000004922 94.0
CMS3_k127_3183022_3 long-chain fatty acid transporting porin activity K07267 - - 0.000000000004354 78.0
CMS3_k127_3183272_0 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000004125 248.0
CMS3_k127_3183272_1 COG0241 Histidinol phosphatase and related phosphatases K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000459 198.0
CMS3_k127_3183272_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000005488 153.0
CMS3_k127_3183272_4 PAS fold - - - 0.00009794 52.0
CMS3_k127_3183479_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 3.53e-224 705.0
CMS3_k127_3183479_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 401.0
CMS3_k127_3183479_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000008667 133.0
CMS3_k127_3191846_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 458.0
CMS3_k127_3191846_1 Permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000008015 238.0
CMS3_k127_3198908_0 MazG-like family - - - 0.0000000000000000000000000000000000000004264 151.0
CMS3_k127_3198908_1 - - - - 0.000000000001839 81.0
CMS3_k127_3210504_0 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 2.014e-319 978.0
CMS3_k127_3210504_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 424.0
CMS3_k127_3210504_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 328.0
CMS3_k127_3210504_3 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 316.0
CMS3_k127_3210504_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003005 252.0
CMS3_k127_3210504_5 Protein of unknown function (DUF2905) - - - 0.000000000000000000001683 95.0
CMS3_k127_3212498_0 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000001063 130.0
CMS3_k127_3212498_1 Heme NO binding - - - 0.0000000000000000000000000001944 121.0
CMS3_k127_3212498_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000009607 47.0
CMS3_k127_3226525_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000004123 220.0
CMS3_k127_32489_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 379.0
CMS3_k127_32489_1 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 378.0
CMS3_k127_32489_2 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 360.0
CMS3_k127_32489_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000000000000000000000005191 268.0
CMS3_k127_32489_4 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000006622 222.0
CMS3_k127_32489_5 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000004012 177.0
CMS3_k127_3250801_0 sulphate transporter K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 580.0
CMS3_k127_3250801_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000364 175.0
CMS3_k127_3250801_2 Regulator of ribonuclease activity B - - - 0.0000003744 57.0
CMS3_k127_3256007_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 359.0
CMS3_k127_3256007_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000032 238.0
CMS3_k127_3256007_2 pathogenesis - - - 0.00000000000000000000000000000000000006127 150.0
CMS3_k127_3256007_3 PFAM Aldehyde dehydrogenase K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.000000000006914 69.0
CMS3_k127_3291216_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 3.538e-282 871.0
CMS3_k127_3291216_1 VirC1 protein K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000002741 229.0
CMS3_k127_3291216_2 Annotation was generated automatically without manual curation K03286 - - 0.000008845 55.0
CMS3_k127_3291247_0 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 444.0
CMS3_k127_3291247_1 Dihaem cytochrome c - - - 0.000000000000000000000000000000000000000000000006232 179.0
CMS3_k127_3291247_2 PEP-CTERM motif - - - 0.000006619 55.0
CMS3_k127_3305972_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.027e-221 703.0
CMS3_k127_3305972_1 ABC transporter transmembrane region K06148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 430.0
CMS3_k127_3305972_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 407.0
CMS3_k127_3306275_0 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 378.0
CMS3_k127_3306275_1 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001705 293.0
CMS3_k127_3306275_2 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000000001728 190.0
CMS3_k127_3306275_3 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000003505 139.0
CMS3_k127_3306275_4 Sulfur oxidation K17223 - - 0.00000000000000000000000000000000004125 138.0
CMS3_k127_3310550_0 Belongs to the dihydroorotate dehydrogenase family K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 516.0
CMS3_k127_3310550_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 374.0
CMS3_k127_3310550_2 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000003156 209.0
CMS3_k127_3310550_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000003312 198.0
CMS3_k127_3310550_4 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000001075 177.0
CMS3_k127_3310550_5 TIGRFAM conserved repeat domain - - - 0.000000000000000000000000000000000000000000004311 170.0
CMS3_k127_3310550_6 regulatory protein, arsR - - - 0.00000000000000000000000000000003813 125.0
CMS3_k127_3310550_7 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000002216 116.0
CMS3_k127_3310550_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000001818 103.0
CMS3_k127_3310550_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000003716 89.0
CMS3_k127_3311612_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 381.0
CMS3_k127_3311612_1 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 360.0
CMS3_k127_3311612_2 NHL repeat - - - 0.000000000000857 79.0
CMS3_k127_3320411_0 Cytochrome c biogenesis protein - - - 0.000000000000000000000000000000000000000000000002136 178.0
CMS3_k127_3320411_1 Spondin_N - - - 0.00000000000000000000000000000000000000000002449 169.0
CMS3_k127_3320411_2 Diguanylate cyclase K03320 - - 0.00000004085 55.0
CMS3_k127_3322870_0 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 373.0
CMS3_k127_3331054_0 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004223 279.0
CMS3_k127_3331054_1 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000009746 170.0
CMS3_k127_333210_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 544.0
CMS3_k127_333210_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 518.0
CMS3_k127_333210_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002782 285.0
CMS3_k127_336840_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 350.0
CMS3_k127_336840_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 325.0
CMS3_k127_336840_10 amidohydrolase - - - 0.00002673 55.0
CMS3_k127_336840_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000002193 221.0
CMS3_k127_336840_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000003495 222.0
CMS3_k127_336840_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000002857 205.0
CMS3_k127_336840_5 Cytochrome c mono- and diheme variants - - - 0.0000000000000000000000000000000000000000000001313 173.0
CMS3_k127_336840_6 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000001767 172.0
CMS3_k127_336840_7 Spondin_N - - - 0.000000000000000000000000000000000000006448 154.0
CMS3_k127_336840_8 Peptidase family M23 - - - 0.0000000000000000000000000000003075 131.0
CMS3_k127_336840_9 Superoxide dismutase K04565 - 1.15.1.1 0.000000002025 65.0
CMS3_k127_3380092_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1048.0
CMS3_k127_3380092_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000319 182.0
CMS3_k127_3380092_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000188 170.0
CMS3_k127_3380092_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000006059 105.0
CMS3_k127_3384261_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 329.0
CMS3_k127_3384261_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 308.0
CMS3_k127_3384261_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000006322 188.0
CMS3_k127_3384261_3 Omptin family - - - 0.000000000000000000000000004053 122.0
CMS3_k127_3394608_1 - - - - 0.0000000003041 67.0
CMS3_k127_339530_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 410.0
CMS3_k127_339530_1 diguanylate cyclase K11444 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000007093 246.0
CMS3_k127_339530_2 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001775 244.0
CMS3_k127_3401175_0 Major Facilitator Superfamily K02575 - - 2.275e-245 766.0
CMS3_k127_3401175_1 kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001701 246.0
CMS3_k127_3401175_2 TIGRFAM nitrite reductase NAD(P)H , large subunit K00362 - 1.7.1.15 0.00000000001647 65.0
CMS3_k127_34119_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.338e-278 861.0
CMS3_k127_34119_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.38e-275 857.0
CMS3_k127_34119_11 ATP synthase I chain K02116 - - 0.000000000006079 70.0
CMS3_k127_34119_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.351e-268 829.0
CMS3_k127_34119_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 536.0
CMS3_k127_34119_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 434.0
CMS3_k127_34119_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 353.0
CMS3_k127_34119_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000004591 184.0
CMS3_k127_34119_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000000000000000005371 180.0
CMS3_k127_34119_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000002111 175.0
CMS3_k127_34119_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000002257 166.0
CMS3_k127_3429947_0 Belongs to the RtcB family K14415 - 6.5.1.3 8.604e-228 713.0
CMS3_k127_3429947_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 5.706e-204 642.0
CMS3_k127_3429947_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 435.0
CMS3_k127_3429947_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000304 258.0
CMS3_k127_3429947_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007006 250.0
CMS3_k127_3429947_5 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000001544 179.0
CMS3_k127_3429947_6 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000002355 169.0
CMS3_k127_3429947_7 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000003624 77.0
CMS3_k127_3429947_8 Cytochrome c - - - 0.00000000008684 67.0
CMS3_k127_3439074_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0019904,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0090304,GO:0097718,GO:0140098,GO:1901360,GO:1901361,GO:1901575 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 544.0
CMS3_k127_3482948_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 419.0
CMS3_k127_3482948_1 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000551 140.0
CMS3_k127_3487311_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 519.0
CMS3_k127_3487311_1 PFAM Carbamoyl-phosphate synthase L chain K01959 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 496.0
CMS3_k127_3487311_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 451.0
CMS3_k127_3487311_3 Acyl transferase domain K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 395.0
CMS3_k127_3487311_4 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000002376 205.0
CMS3_k127_3487311_5 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000003938 124.0
CMS3_k127_3487311_6 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000000007918 104.0
CMS3_k127_3499285_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1009.0
CMS3_k127_3499285_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 1.991e-230 718.0
CMS3_k127_3499285_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000003851 162.0
CMS3_k127_3499285_3 type II secretion system protein N K02463 - - 0.0000000000000167 80.0
CMS3_k127_3528423_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 591.0
CMS3_k127_3528423_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 548.0
CMS3_k127_3528423_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006588 272.0
CMS3_k127_3528423_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000003526 148.0
CMS3_k127_3528423_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000248 53.0
CMS3_k127_3532826_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 606.0
CMS3_k127_3532826_1 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 315.0
CMS3_k127_3554903_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 1.89e-256 816.0
CMS3_k127_3554903_1 PFAM Type II secretion system protein E K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 541.0
CMS3_k127_3554903_2 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000133 219.0
CMS3_k127_355934_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1088.0
CMS3_k127_355934_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 497.0
CMS3_k127_355934_2 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 341.0
CMS3_k127_355934_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000001898 250.0
CMS3_k127_355934_4 PFAM glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000004554 190.0
CMS3_k127_355934_5 Mitomycin resistance protein - - - 0.000000000000000000000000000000000005791 139.0
CMS3_k127_355934_6 - - - - 0.00000000000004392 76.0
CMS3_k127_355934_8 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000008923 68.0
CMS3_k127_3574456_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 8.445e-260 812.0
CMS3_k127_3574456_1 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 545.0
CMS3_k127_3574456_2 AIR synthase related protein, N-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009953 451.0
CMS3_k127_3574456_3 HypF finger - - - 0.000000000000000000000000000000000000000000000000000001193 199.0
CMS3_k127_3574456_4 - - - - 0.000000000000000000000000000000000000000000000000228 185.0
CMS3_k127_3574456_5 ATP synthase subunit C K02124 - - 0.0000000000000000000000000007976 116.0
CMS3_k127_3574456_6 ATP synthase (F/14-kDa) subunit - - - 0.000000000000000000001534 97.0
CMS3_k127_3574456_7 - - - - 0.00000000000008166 80.0
CMS3_k127_3574456_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit - - - 0.00000006579 54.0
CMS3_k127_3593376_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1206.0
CMS3_k127_3593376_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003819 272.0
CMS3_k127_3634050_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 2.237e-215 677.0
CMS3_k127_3634050_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 340.0
CMS3_k127_3634050_2 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000005564 168.0
CMS3_k127_3634050_3 - - - - 0.0000000000126 67.0
CMS3_k127_3634050_4 Tetratricopeptide repeat - - - 0.0000005155 55.0
CMS3_k127_3636543_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 348.0
CMS3_k127_3636543_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000012 76.0
CMS3_k127_3650216_0 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000001019 173.0
CMS3_k127_3650216_1 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000000002626 137.0
CMS3_k127_3650216_2 - - - - 0.0000000000000000005084 91.0
CMS3_k127_3650216_3 Conserved repeat domain - - - 0.0000001319 64.0
CMS3_k127_3652302_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 308.0
CMS3_k127_3652302_1 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000001854 219.0
CMS3_k127_3652302_2 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.00000000000000000000000000000000000001294 152.0
CMS3_k127_3652302_3 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000365 122.0
CMS3_k127_366493_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 608.0
CMS3_k127_366493_1 Peptidase M50 - - - 0.00000000000000000000000000000005328 132.0
CMS3_k127_3667673_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.649e-235 751.0
CMS3_k127_3667673_1 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 439.0
CMS3_k127_3667673_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000002674 185.0
CMS3_k127_3667673_3 Belongs to the skp family K06142 - - 0.000611 46.0
CMS3_k127_3714173_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1239.0
CMS3_k127_3714173_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 569.0
CMS3_k127_3714173_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 549.0
CMS3_k127_3714173_3 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 471.0
CMS3_k127_3714173_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 427.0
CMS3_k127_3714173_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000006808 210.0
CMS3_k127_3714173_6 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000001302 111.0
CMS3_k127_3728784_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 2.854e-236 750.0
CMS3_k127_3728784_1 Putative tRNA binding domain K06878 - - 0.000000000000000000000000000000000000000000000000000001567 192.0
CMS3_k127_3728784_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.000000000000000000000000000000000000000000000378 175.0
CMS3_k127_3728784_3 Heavy-metal-associated domain K07213 - - 0.00000000000007097 73.0
CMS3_k127_373085_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 327.0
CMS3_k127_373085_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000001045 226.0
CMS3_k127_373085_2 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000003203 149.0
CMS3_k127_373085_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000008289 111.0
CMS3_k127_3771601_0 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 329.0
CMS3_k127_3771601_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000001436 177.0
CMS3_k127_3775432_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 5.581e-210 662.0
CMS3_k127_3775432_1 acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 417.0
CMS3_k127_3775432_2 Glutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 383.0
CMS3_k127_3775432_3 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 371.0
CMS3_k127_3775432_4 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000968 287.0
CMS3_k127_3775432_5 Cytochrome c - - - 0.00000000000000000000000002574 113.0
CMS3_k127_3775432_6 diguanylate cyclase - - - 0.00000000000001405 77.0
CMS3_k127_3789107_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.219e-294 918.0
CMS3_k127_3789107_1 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 1.62e-219 684.0
CMS3_k127_3789107_10 HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.00000000000000007723 85.0
CMS3_k127_3789107_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 554.0
CMS3_k127_3789107_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 358.0
CMS3_k127_3789107_4 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000006248 177.0
CMS3_k127_3789107_5 - - - - 0.00000000000000000000000000000000000000000000002153 186.0
CMS3_k127_3789107_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000005353 171.0
CMS3_k127_3789107_7 Universal stress protein family K06149 - - 0.00000000000000000000000000000000882 134.0
CMS3_k127_3789107_8 Planctomycete cytochrome C - - - 0.00000000000000000000000000005714 120.0
CMS3_k127_3789107_9 cytochrome - - - 0.00000000000000000002765 93.0
CMS3_k127_3828775_0 carbohydrate transport K11688,K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 323.0
CMS3_k127_3828775_1 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
CMS3_k127_3828775_2 salt-induced outer membrane protein K07283 - - 0.0000000000000000000000000000000000000000000000000001146 194.0
CMS3_k127_3828775_3 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000000001665 123.0
CMS3_k127_3828775_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000267 62.0
CMS3_k127_3832544_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000001384 214.0
CMS3_k127_3832544_1 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000002649 177.0
CMS3_k127_3832544_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0002902 47.0
CMS3_k127_3847018_0 ABC transporter - - - 7.182e-293 906.0
CMS3_k127_3847018_1 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000136 186.0
CMS3_k127_3847018_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000001003 127.0
CMS3_k127_3847018_3 - - - - 0.0000000000000000000002755 99.0
CMS3_k127_3847479_0 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000001828 155.0
CMS3_k127_3847479_1 Esterase PHB depolymerase K03932 - - 0.00000000000000000000001057 113.0
CMS3_k127_3847479_2 - - - - 0.0000000000000000005861 93.0
CMS3_k127_3851166_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 625.0
CMS3_k127_3851166_1 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000112 215.0
CMS3_k127_3851166_2 Sel1-like repeats. - - - 0.0000000000001761 74.0
CMS3_k127_3851166_4 alginic acid biosynthetic process - - - 0.00000000312 71.0
CMS3_k127_3851166_5 heat shock protein binding K05516,K05801,K18481 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.00004687 56.0
CMS3_k127_3865976_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 591.0
CMS3_k127_3865976_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 389.0
CMS3_k127_3865976_2 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 286.0
CMS3_k127_3865976_3 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000000000000002515 219.0
CMS3_k127_3865976_4 Belongs to the DnaA family. HdA subfamily K10763 - - 0.00000000000000000000000000000000000000000000000000000000004109 212.0
CMS3_k127_3865976_5 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000004714 196.0
CMS3_k127_3865976_6 COG1393 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.000000000000000000000000000000000000003097 149.0
CMS3_k127_3865976_7 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.00000000000000000000000008765 107.0
CMS3_k127_3865976_8 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000001725 80.0
CMS3_k127_3887595_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 8.267e-274 865.0
CMS3_k127_3887595_1 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 294.0
CMS3_k127_3887595_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000835 273.0
CMS3_k127_3887595_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000007961 68.0
CMS3_k127_3887595_4 TIGRFAM RHS repeat-associated core domain - - - 0.0001223 53.0
CMS3_k127_39435_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 7.288e-281 869.0
CMS3_k127_39435_1 ABC transporter K06158 - - 2.885e-234 740.0
CMS3_k127_39435_10 AntiSigma factor - - - 0.0000000000000000000000000008108 121.0
CMS3_k127_39435_11 Membrane fusogenic activity K09806 - - 0.0000000000000000000005397 98.0
CMS3_k127_39435_12 Mg chelatase-related protein K07391 - - 0.0000000000001209 74.0
CMS3_k127_39435_13 Ammonium transporter K03320 - - 0.000000000009785 66.0
CMS3_k127_39435_14 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000003225 70.0
CMS3_k127_39435_15 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000005834 52.0
CMS3_k127_39435_2 ABC transporter, ATP-binding protein K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 412.0
CMS3_k127_39435_3 ATPases associated with a variety of cellular activities K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 345.0
CMS3_k127_39435_4 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007684 270.0
CMS3_k127_39435_5 Belongs to the binding-protein-dependent transport system permease family K01998,K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000138 254.0
CMS3_k127_39435_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001912 243.0
CMS3_k127_39435_7 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.000000000000000000000000000000000000000000000000000000000006636 208.0
CMS3_k127_39435_8 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000006336 171.0
CMS3_k127_39435_9 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000005507 153.0
CMS3_k127_3943817_0 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 560.0
CMS3_k127_3943817_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 484.0
CMS3_k127_3943817_2 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 458.0
CMS3_k127_3943817_3 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 416.0
CMS3_k127_3943817_4 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 297.0
CMS3_k127_3943817_5 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.000000000000000000000000000000000000000000000000000000000000000004715 244.0
CMS3_k127_3943817_6 Regulator of ribonuclease activity B - - - 0.000000000000000000000009214 105.0
CMS3_k127_3943817_7 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000002327 77.0
CMS3_k127_3947291_0 HAMP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003749 267.0
CMS3_k127_3947291_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000002296 156.0
CMS3_k127_3947291_2 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.00000000000000000001024 106.0
CMS3_k127_3947291_3 LysM domain - - - 0.00000000003237 64.0
CMS3_k127_3947291_4 PFAM Sulfate transporter family - - - 0.0000893 47.0
CMS3_k127_3982058_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 614.0
CMS3_k127_3982058_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 343.0
CMS3_k127_3982058_2 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 283.0
CMS3_k127_3982058_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001508 254.0
CMS3_k127_3982058_4 Belongs to the peptidase S11 family K07262 - - 0.000000000000001211 82.0
CMS3_k127_4001085_0 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 1.434e-242 783.0
CMS3_k127_4001085_1 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000000000000004961 173.0
CMS3_k127_4001085_2 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000000003531 138.0
CMS3_k127_4001085_3 Prokaryotic N-terminal methylation motif K02671 - - 0.000000000000000000000000000002426 126.0
CMS3_k127_4001085_4 Type IV pilus assembly protein PilX C-term K02673 - - 0.00000000000000001026 91.0
CMS3_k127_4005000_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 1.823e-309 955.0
CMS3_k127_4005000_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 506.0
CMS3_k127_4005000_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 453.0
CMS3_k127_4005000_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000002361 194.0
CMS3_k127_4005000_4 PFAM cytoplasmic chaperone TorD family protein - - - 0.000000000000000000000000000000000000000000000000002329 191.0
CMS3_k127_4005000_5 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000001147 136.0
CMS3_k127_4005000_6 4Fe-4S binding domain - - - 0.00000000000000000000000003651 115.0
CMS3_k127_4007168_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 4.157e-197 623.0
CMS3_k127_4007168_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000001257 227.0
CMS3_k127_4007168_2 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000008463 207.0
CMS3_k127_4007168_3 Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000003785 173.0
CMS3_k127_4007168_4 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000000125 130.0
CMS3_k127_4007168_5 phosphorelay sensor kinase activity - - - 0.000000000000000000000313 99.0
CMS3_k127_4007168_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000002873 95.0
CMS3_k127_4007791_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 358.0
CMS3_k127_4007791_1 signal transduction histidine kinase K07637 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 352.0
CMS3_k127_4007791_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 335.0
CMS3_k127_4007791_3 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 321.0
CMS3_k127_4007791_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000007049 138.0
CMS3_k127_4007791_5 Protein of unknown function (DUF3565) - - - 0.000000000000000000000000212 106.0
CMS3_k127_4007791_6 protein modification by small protein conjugation K10455 GO:0000151,GO:0002009,GO:0002165,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0007275,GO:0007444,GO:0007552,GO:0007560,GO:0008092,GO:0008150,GO:0008152,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0016567,GO:0019538,GO:0031461,GO:0031463,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0035239,GO:0035295,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046528,GO:0046529,GO:0046983,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048856,GO:0051865,GO:0060429,GO:0060562,GO:0070647,GO:0071704,GO:1901564,GO:1902494,GO:1990234 - 0.00000000000000007725 91.0
CMS3_k127_4018823_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 469.0
CMS3_k127_4018823_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 337.0
CMS3_k127_4018823_2 belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000008045 260.0
CMS3_k127_4018823_3 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000004003 216.0
CMS3_k127_4022303_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 8.987e-259 809.0
CMS3_k127_4022303_1 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001371 241.0
CMS3_k127_4022303_2 Bacterial regulatory proteins, luxR family K07689 - - 0.0000000000000000000000000000000000000000000000000000000003441 205.0
CMS3_k127_4022303_3 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000009066 194.0
CMS3_k127_4022303_4 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000001329 162.0
CMS3_k127_4022303_5 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000001688 160.0
CMS3_k127_4022303_6 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000002451 123.0
CMS3_k127_4022303_7 acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000008436 106.0
CMS3_k127_4022303_8 response regulator K03413 - - 0.000000000000000000005283 98.0
CMS3_k127_4022303_9 - - - - 0.0000000000000003219 81.0
CMS3_k127_4043294_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.742e-206 647.0
CMS3_k127_4043294_1 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 595.0
CMS3_k127_4043294_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 291.0
CMS3_k127_4043294_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
CMS3_k127_4043294_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000005778 156.0
CMS3_k127_4043294_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000267 148.0
CMS3_k127_4043294_6 competence protein ComEA K02237 - - 0.00000000000008382 76.0
CMS3_k127_4044811_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.715e-214 682.0
CMS3_k127_4044811_1 Response regulator of the LytR AlgR family K02477,K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004294 255.0
CMS3_k127_4044811_2 Thioredoxin-like - - - 0.00000000000000000000000000001156 124.0
CMS3_k127_4046166_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 332.0
CMS3_k127_4046166_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 316.0
CMS3_k127_4046166_2 MobA-like NTP transferase domain K07281 - 2.7.7.74 0.00000000000000000000000000000000000000009883 156.0
CMS3_k127_4046166_3 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000004493 154.0
CMS3_k127_4064672_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 2.818e-225 702.0
CMS3_k127_4064672_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 428.0
CMS3_k127_4064672_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 407.0
CMS3_k127_4064672_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 354.0
CMS3_k127_4064672_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 328.0
CMS3_k127_4064672_5 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004129 269.0
CMS3_k127_4064672_6 - - - - 0.0000000000000000000000000000009519 126.0
CMS3_k127_4064672_7 Sporulation related domain K03749 - - 0.0000007485 55.0
CMS3_k127_4067574_0 COG1032 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 364.0
CMS3_k127_4067574_1 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 286.0
CMS3_k127_4067574_2 Pyruvate formate lyase-activating protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000002096 224.0
CMS3_k127_4067574_3 pfam ammecr1 K09141 - - 0.000000000000000000000000000000000000000000000000000000003299 205.0
CMS3_k127_4070424_0 LUD domain K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 595.0
CMS3_k127_4070424_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 417.0
CMS3_k127_4070424_2 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0000287,GO:0003674,GO:0003824,GO:0004474,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009436,GO:0009987,GO:0015980,GO:0016054,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046185,GO:0046395,GO:0046487,GO:0046872,GO:0046912,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:1901575 2.3.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 328.0
CMS3_k127_4070424_3 (Fe-S) oxidoreductase K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 330.0
CMS3_k127_4070424_4 LUD domain K00782 - - 0.000000000000000000000000000000000000000000008169 170.0
CMS3_k127_4070424_5 alpha-ribazole phosphatase activity K01834 - 5.4.2.11 0.00000000000000008009 87.0
CMS3_k127_411702_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0016874,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000006084 265.0
CMS3_k127_411702_1 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000009809 60.0
CMS3_k127_411702_2 OmpA family K03640 - - 0.0003955 50.0
CMS3_k127_4124720_0 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 459.0
CMS3_k127_4124720_1 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 436.0
CMS3_k127_4124720_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 420.0
CMS3_k127_4133329_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 353.0
CMS3_k127_4133329_1 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001273 258.0
CMS3_k127_4133329_2 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000000000000000000000004162 159.0
CMS3_k127_4133329_3 FtsX-like permease family K02004 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009405,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0051704,GO:0071944 - 0.000000000000002098 86.0
CMS3_k127_4145423_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006016 287.0
CMS3_k127_4145423_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000709 264.0
CMS3_k127_4145423_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000005464 199.0
CMS3_k127_4145423_3 PFAM Formylglycine-generating sulfatase enzyme K06196,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000002266 81.0
CMS3_k127_4160892_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 531.0
CMS3_k127_4160892_1 Molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.7.7.77 0.0000000000000000000000000000000000608 136.0
CMS3_k127_4174016_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 594.0
CMS3_k127_4174016_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 321.0
CMS3_k127_4174016_2 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 307.0
CMS3_k127_4174016_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000006864 258.0
CMS3_k127_4174016_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001569 253.0
CMS3_k127_4174016_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000305 236.0
CMS3_k127_4174016_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000006623 65.0
CMS3_k127_4174016_7 - - - - 0.00000000002107 73.0
CMS3_k127_4174716_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.566e-240 755.0
CMS3_k127_4174716_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 338.0
CMS3_k127_4174716_2 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 295.0
CMS3_k127_4174716_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 287.0
CMS3_k127_4188334_0 COG2863 Cytochrome c553 - - - 0.0000000000000000000000000000000000000000005191 165.0
CMS3_k127_4188334_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000002161 117.0
CMS3_k127_4188334_2 PFAM Cold-shock K03704 - - 0.00000000000000000000000003407 111.0
CMS3_k127_4188334_3 - - - - 0.0000000000000004295 78.0
CMS3_k127_4204409_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 455.0
CMS3_k127_4204409_1 Bacterial sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 382.0
CMS3_k127_4209211_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 550.0
CMS3_k127_4209211_1 Displays ATPase and GTPase activities K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 334.0
CMS3_k127_4209211_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 316.0
CMS3_k127_4209211_3 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000000000007397 173.0
CMS3_k127_4209211_4 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000000000005826 148.0
CMS3_k127_4212262_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 491.0
CMS3_k127_4212262_1 alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 415.0
CMS3_k127_4212262_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000202 119.0
CMS3_k127_4212262_4 FHA Domain - - - 0.00000000000000007812 84.0
CMS3_k127_4212262_5 Protein of unknown function (DUF503) K09764 - - 0.00000000000009192 74.0
CMS3_k127_4215090_0 COG0835 Chemotaxis signal transduction protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000004051 226.0
CMS3_k127_4215090_1 Pentapeptide repeats (8 copies) - - - 0.00000000000000000004817 96.0
CMS3_k127_4215090_2 ferredoxin-NADP+ reductase activity - - - 0.000000000000000001512 98.0
CMS3_k127_4215090_3 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000007023 66.0
CMS3_k127_4220912_0 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0015711,GO:0015740,GO:0015849,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0071702 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 558.0
CMS3_k127_4220912_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
CMS3_k127_4220912_2 PFAM Histidine triad (HIT) protein - - - 0.000000000000000000000000000000009319 131.0
CMS3_k127_4220912_3 - K19168 - - 0.00003364 50.0
CMS3_k127_4226704_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 374.0
CMS3_k127_4226704_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001058 254.0
CMS3_k127_4226704_2 RNA recognition motif - - - 0.00000000000000000000009209 103.0
CMS3_k127_423427_0 Domain of unknown function (DUF4157) - - - 1.516e-244 819.0
CMS3_k127_423427_1 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 548.0
CMS3_k127_423427_10 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000005064 149.0
CMS3_k127_423427_11 - K06905 - - 0.0000000000000000000000000000001028 138.0
CMS3_k127_423427_12 Rhs element vgr protein - - - 0.0000000000000000000000000000007301 130.0
CMS3_k127_423427_13 - - - - 0.000000000000000000000000006367 114.0
CMS3_k127_423427_14 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000005554 118.0
CMS3_k127_423427_15 - - - - 0.0000000000000000000000001253 116.0
CMS3_k127_423427_16 - K06903 - - 0.0000000000000000001561 93.0
CMS3_k127_423427_17 - - - - 0.00000000000000003256 93.0
CMS3_k127_423427_18 - - - - 0.00000000000001396 81.0
CMS3_k127_423427_2 Phage tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 430.0
CMS3_k127_423427_3 Baseplate J-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 330.0
CMS3_k127_423427_5 Phage tail protein (Tail_P2_I) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002494 284.0
CMS3_k127_423427_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000002165 223.0
CMS3_k127_423427_7 - - - - 0.00000000000000000000000000000000000000000000005429 174.0
CMS3_k127_423427_9 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000001796 139.0
CMS3_k127_4235761_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 571.0
CMS3_k127_4235761_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 558.0
CMS3_k127_4235761_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 360.0
CMS3_k127_4235761_3 FimV C-terminal K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001141 276.0
CMS3_k127_4235761_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 0.000000000000000952 76.0
CMS3_k127_4270510_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 1.88e-219 695.0
CMS3_k127_4270510_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007935 481.0
CMS3_k127_4270510_2 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000003832 238.0
CMS3_k127_4270510_3 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000008925 158.0
CMS3_k127_4270510_4 pilus assembly protein PilP K02665 - - 0.000000000000000000001597 98.0
CMS3_k127_4280768_0 electron transfer activity K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 387.0
CMS3_k127_4280768_1 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000001822 269.0
CMS3_k127_4280768_2 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000436 209.0
CMS3_k127_4280768_3 YtkA-like - - - 0.000000000000000000000000493 111.0
CMS3_k127_4280768_4 Host attachment protein - - - 0.000000007859 57.0
CMS3_k127_4309880_0 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 2.988e-235 768.0
CMS3_k127_4309880_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000001057 233.0
CMS3_k127_4309880_2 CheB methylesterase K06597 - - 0.00000000000000000000000000000000000000000000000000000000001284 220.0
CMS3_k127_4309880_3 Two component signalling adaptor domain K06598 - - 0.0000000000000000000116 98.0
CMS3_k127_4334628_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.02e-221 701.0
CMS3_k127_4334628_1 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000000000003165 212.0
CMS3_k127_4337093_0 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 503.0
CMS3_k127_4337093_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 371.0
CMS3_k127_4337093_2 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 299.0
CMS3_k127_4337093_3 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000014 82.0
CMS3_k127_4337093_4 Amidase - - - 0.0005679 45.0
CMS3_k127_4343707_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 580.0
CMS3_k127_4343707_1 Cytochrome B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 341.0
CMS3_k127_4343707_2 Belongs to the glutathione peroxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005162 235.0
CMS3_k127_4343707_3 PFAM Dihaem cytochrome c - - - 0.0000000000000000000000000000000000000000000000007947 181.0
CMS3_k127_4343707_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000003275 183.0
CMS3_k127_4343707_5 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000415 135.0
CMS3_k127_4343707_6 protein conserved in bacteria K05527,K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000002222 112.0
CMS3_k127_4343707_7 - - - - 0.0000000000000002196 87.0
CMS3_k127_4359758_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000004983 227.0
CMS3_k127_4359758_1 COG3168 Tfp pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000009402 128.0
CMS3_k127_4359758_2 agmatine deiminase activity K08589,K10536 GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.22.37,3.5.3.12 0.0000000000000003374 91.0
CMS3_k127_4359758_3 Domain of unknown function (DUF4034) - - - 0.0000000000002152 83.0
CMS3_k127_4382755_0 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 336.0
CMS3_k127_4382755_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000353 250.0
CMS3_k127_4382755_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000002131 134.0
CMS3_k127_4385386_0 Beta-Casp domain K07576 - - 2.582e-203 642.0
CMS3_k127_4385386_1 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 365.0
CMS3_k127_4385386_2 Protein of unknown function (DUF4197) - - - 0.000000000421 66.0
CMS3_k127_4388703_0 ABC transporter, urea K11959 - - 1.918e-231 721.0
CMS3_k127_4388703_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 345.0
CMS3_k127_4388703_2 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001204 251.0
CMS3_k127_4388703_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000006752 156.0
CMS3_k127_4388703_4 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.00000000000000000000000000006571 117.0
CMS3_k127_4388703_5 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.0000000000000004023 87.0
CMS3_k127_4420722_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 511.0
CMS3_k127_4420722_1 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 389.0
CMS3_k127_4420722_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 347.0
CMS3_k127_4420722_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000004025 198.0
CMS3_k127_4420722_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000009065 189.0
CMS3_k127_4420722_5 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000006639 123.0
CMS3_k127_44681_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 4.728e-218 685.0
CMS3_k127_44681_1 Cupin superfamily protein K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 358.0
CMS3_k127_44681_2 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000002449 196.0
CMS3_k127_44681_3 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000001341 143.0
CMS3_k127_44681_4 protein acetylation - - - 0.00000000000000000000000000915 116.0
CMS3_k127_4495394_0 - - - - 0.0 1172.0
CMS3_k127_4495394_1 - - - - 0.00000002735 61.0
CMS3_k127_4495394_2 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.00000003725 57.0
CMS3_k127_4511087_0 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000003974 176.0
CMS3_k127_4511087_1 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000001291 89.0
CMS3_k127_4511087_2 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.000000000000003552 87.0
CMS3_k127_4511087_3 Sel1 repeat K12132 - 2.7.11.1 0.000000000002293 77.0
CMS3_k127_4528523_0 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 589.0
CMS3_k127_4528523_1 XRE family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 296.0
CMS3_k127_4528523_2 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001087 258.0
CMS3_k127_4528523_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002636 251.0
CMS3_k127_4528523_4 Thermostable hemolysin - - - 0.00000000000000000000000000000000000000007696 159.0
CMS3_k127_4528523_5 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.00000000344 65.0
CMS3_k127_4549781_0 Phosphate transport system permease protein K02038 - - 4.044e-232 730.0
CMS3_k127_4549781_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 434.0
CMS3_k127_4549781_2 ABC transporter permease K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 341.0
CMS3_k127_4549781_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 306.0
CMS3_k127_4549781_4 Protein of unknown function (DUF2934) - - - 0.000004442 53.0
CMS3_k127_4551963_0 PFAM RNA recognition motif - - - 0.0000000000000000000000003901 107.0
CMS3_k127_4551963_1 hemolysin activation secretion protein - - - 0.0000000000000003783 82.0
CMS3_k127_4569734_0 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 494.0
CMS3_k127_4569734_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001065 236.0
CMS3_k127_4569734_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000005117 192.0
CMS3_k127_4569734_3 - - - - 0.0000006789 51.0
CMS3_k127_4575844_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 486.0
CMS3_k127_4575844_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 372.0
CMS3_k127_4575844_2 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000002578 252.0
CMS3_k127_4580194_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 7.938e-271 840.0
CMS3_k127_4580194_1 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 301.0
CMS3_k127_4580194_2 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000005154 205.0
CMS3_k127_4580194_3 General secretion pathway protein C K02452 - - 0.0000000000000000000000000000000000000000000002175 179.0
CMS3_k127_4580194_4 domain, Protein - - - 0.00000000000000000000000000007997 125.0
CMS3_k127_4580194_5 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000002468 121.0
CMS3_k127_4583370_0 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 437.0
CMS3_k127_4583370_1 PFAM Peptidoglycan-binding lysin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 368.0
CMS3_k127_4583370_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 358.0
CMS3_k127_4583370_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000002032 247.0
CMS3_k127_4583370_4 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000000000009578 162.0
CMS3_k127_4583370_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000001423 155.0
CMS3_k127_4592061_0 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 402.0
CMS3_k127_4592061_1 PFAM periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001734 284.0
CMS3_k127_4592061_2 PFAM N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000005428 262.0
CMS3_k127_4592061_3 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000001446 198.0
CMS3_k127_4592061_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 0.0000000000000000000000118 109.0
CMS3_k127_4603024_0 response regulator K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 559.0
CMS3_k127_4603024_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 415.0
CMS3_k127_4603024_2 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001784 289.0
CMS3_k127_4603024_3 rubredoxin - - - 0.00000000000000000000000002767 108.0
CMS3_k127_4689037_0 Protein conserved in bacteria - - - 1.98e-239 765.0
CMS3_k127_4689037_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 497.0
CMS3_k127_4689037_2 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 453.0
CMS3_k127_4689037_3 PFAM helix-turn-helix, AraC type ThiJ PfpI - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 375.0
CMS3_k127_4689037_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008032 244.0
CMS3_k127_4689037_5 Histidine kinase-like ATPase domain - - - 0.0000000002044 66.0
CMS3_k127_4698344_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 451.0
CMS3_k127_4698344_1 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 346.0
CMS3_k127_4698344_2 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664 GO:0000162,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 315.0
CMS3_k127_4698344_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000003428 209.0
CMS3_k127_4698344_4 Alpha/beta hydrolase family - - - 0.00001659 55.0
CMS3_k127_4754687_0 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 333.0
CMS3_k127_4754687_1 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 295.0
CMS3_k127_4754687_2 Formyl transferase K00604 - 2.1.2.9 0.000000000000000000000000000000000001337 149.0
CMS3_k127_4754687_3 YCII-related domain - - - 0.000000000000000000000000000000004399 130.0
CMS3_k127_4754687_4 Glutaminase K01425 - 3.5.1.2 0.000000000000000000001979 93.0
CMS3_k127_4779919_0 - - - - 0.000000000000000000000000000000000000000000000000001122 187.0
CMS3_k127_4779919_1 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000988 171.0
CMS3_k127_4779919_2 - - - - 0.0000000000000000000000000000000000000003533 164.0
CMS3_k127_4781013_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.438e-299 924.0
CMS3_k127_4781013_1 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000003165 173.0
CMS3_k127_4781013_2 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.0000000000000000000000000005109 117.0
CMS3_k127_4781013_3 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.0000000000000000001971 93.0
CMS3_k127_4788067_0 ABC transporter transmembrane region K06147 - - 2.216e-239 754.0
CMS3_k127_4788067_1 cellulase activity - - - 0.00000000000000000000000000002093 132.0
CMS3_k127_4788067_2 cellulase activity - - - 0.00000000000000000000000000006866 128.0
CMS3_k127_4795625_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0 1077.0
CMS3_k127_4795625_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000006833 174.0
CMS3_k127_4795625_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000001262 56.0
CMS3_k127_4821485_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 591.0
CMS3_k127_4821485_1 DNA polymerase III, delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 327.0
CMS3_k127_4821485_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000009331 214.0
CMS3_k127_4821485_3 maF-like protein K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.0000000000000000000000000000000000000000000000000000921 193.0
CMS3_k127_4821485_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000004342 188.0
CMS3_k127_4821485_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000006647 156.0
CMS3_k127_4821485_6 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.000000000001975 67.0
CMS3_k127_4833072_0 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 338.0
CMS3_k127_4833072_1 COG1994 Zn-dependent proteases - - - 0.0000000000000000000000000000000000000000000000000002382 212.0
CMS3_k127_4833072_2 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000003791 90.0
CMS3_k127_4839674_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1067.0
CMS3_k127_4839674_1 double-strand break repair protein AddB K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001579 254.0
CMS3_k127_4839674_2 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000001215 189.0
CMS3_k127_4844722_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.185e-201 633.0
CMS3_k127_4844722_1 Required for chromosome condensation and partitioning K03529 - - 2.425e-200 645.0
CMS3_k127_4844722_2 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 436.0
CMS3_k127_4844722_3 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 337.0
CMS3_k127_4844722_4 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000007084 254.0
CMS3_k127_4844722_5 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000004689 241.0
CMS3_k127_4844722_6 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022402,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032506,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 - 0.00000000625 66.0
CMS3_k127_4845504_0 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 486.0
CMS3_k127_4845504_1 ABC transporter K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000001028 237.0
CMS3_k127_4845504_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000004784 235.0
CMS3_k127_4845504_3 ABC-type tungstate transport system K05773 - - 0.000000000000000000000000000000000000000009129 154.0
CMS3_k127_4847598_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 523.0
CMS3_k127_4847598_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001053 283.0
CMS3_k127_4847598_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000001009 238.0
CMS3_k127_4847598_3 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000000000000001171 174.0
CMS3_k127_4847598_4 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000000000000008077 173.0
CMS3_k127_4847598_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000002547 94.0
CMS3_k127_484943_0 Arylsulfotransferase Ig-like domain K01023 - 2.8.2.22 0.0000000000000000000000000000000000000000000000007768 196.0
CMS3_k127_484943_1 COG1994 Zn-dependent proteases - - - 0.000000000000000000000000000000000000000000002192 188.0
CMS3_k127_484943_2 Outer membrane efflux protein - - - 0.000000000000004571 80.0
CMS3_k127_484943_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000003407 79.0
CMS3_k127_4849652_0 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 324.0
CMS3_k127_4849652_1 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 292.0
CMS3_k127_4849652_2 PFAM cytochrome c, class I K08738 - - 0.00000000000000000000000003535 111.0
CMS3_k127_4850799_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 7.168e-228 720.0
CMS3_k127_4850799_1 Belongs to the 5'-nucleotidase family K17224 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 467.0
CMS3_k127_4850799_2 COG1131 ABC-type multidrug transport system, ATPase component K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 421.0
CMS3_k127_4850799_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 371.0
CMS3_k127_4850799_4 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 341.0
CMS3_k127_4850799_5 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001985 265.0
CMS3_k127_4850799_6 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.00000004975 63.0
CMS3_k127_4850799_7 - - - - 0.00001066 57.0
CMS3_k127_4868758_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 466.0
CMS3_k127_4868758_1 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 298.0
CMS3_k127_4868758_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002796 255.0
CMS3_k127_4868758_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001173 233.0
CMS3_k127_4881751_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.927e-237 742.0
CMS3_k127_4881751_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 4.071e-216 711.0
CMS3_k127_4881751_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 575.0
CMS3_k127_4881751_3 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000001258 220.0
CMS3_k127_4881751_4 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000000002032 186.0
CMS3_k127_4881751_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000002906 165.0
CMS3_k127_4881751_6 Hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000001972 154.0
CMS3_k127_4881751_7 Sporulation related domain K03749 - - 0.0000000009625 63.0
CMS3_k127_4892000_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 4.287e-211 672.0
CMS3_k127_4892000_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 362.0
CMS3_k127_4892000_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 346.0
CMS3_k127_4892000_3 4Fe-4S dicluster domain K00184 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000005113 248.0
CMS3_k127_4892000_4 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000000000002108 177.0
CMS3_k127_4892000_5 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000856 73.0
CMS3_k127_4892000_6 Protein of unknown function (DUF3617) - - - 0.0000000004339 66.0
CMS3_k127_4892000_7 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K04013,K15876 - - 0.00000009954 62.0
CMS3_k127_4892000_8 cytochrome K17230 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000001336 62.0
CMS3_k127_4912961_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 492.0
CMS3_k127_4912961_1 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000004744 215.0
CMS3_k127_4912961_2 Hsp20/alpha crystallin family K04080 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.000000000000000000000000000000000000000000000000003505 185.0
CMS3_k127_4912961_3 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000004009 170.0
CMS3_k127_4912961_4 - - - - 0.0000000003705 66.0
CMS3_k127_4928789_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 9.774e-213 668.0
CMS3_k127_4928789_1 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 450.0
CMS3_k127_4928789_2 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000004981 175.0
CMS3_k127_4928789_3 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000005692 135.0
CMS3_k127_4928789_4 Gaf domain K01768,K17763 - 4.6.1.1 0.0000000000000000000000000000000963 128.0
CMS3_k127_4936495_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 325.0
CMS3_k127_4936495_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 323.0
CMS3_k127_4936495_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000009142 160.0
CMS3_k127_4936495_3 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000000000000000008165 119.0
CMS3_k127_4936495_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000278 89.0
CMS3_k127_4946046_0 Predicted methyltransferase regulatory domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 349.0
CMS3_k127_4946046_2 Lysine methyltransferase - - - 0.000000000000000000003088 94.0
CMS3_k127_4947879_0 PFAM Transglutaminase-like superfamily K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 419.0
CMS3_k127_4947879_1 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 401.0
CMS3_k127_4947879_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006824 257.0
CMS3_k127_4950267_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 400.0
CMS3_k127_4950267_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 317.0
CMS3_k127_4950267_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001076 267.0
CMS3_k127_4950267_3 Signal Transduction Histidine Kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001136 251.0
CMS3_k127_4955064_0 Diguanylate cyclase K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 323.0
CMS3_k127_4955064_1 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000001359 236.0
CMS3_k127_4955064_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000001525 201.0
CMS3_k127_4955064_3 LVIVD repeat - - - 0.000002242 59.0
CMS3_k127_4963937_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 293.0
CMS3_k127_4963937_3 response regulator K07720 - - 0.0000000495 62.0
CMS3_k127_4963937_4 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.00000006543 57.0
CMS3_k127_4970495_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 9.297e-278 861.0
CMS3_k127_4970495_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 1.09e-223 700.0
CMS3_k127_4970495_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 320.0
CMS3_k127_4970495_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000002406 209.0
CMS3_k127_4970495_4 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility K21087 GO:0000166,GO:0001539,GO:0003674,GO:0005488,GO:0006928,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0035438,GO:0036094,GO:0040011,GO:0040012,GO:0043167,GO:0043168,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051674,GO:0065007,GO:0071945,GO:0071973,GO:0097159,GO:0097367,GO:0097588,GO:1901265,GO:1901363,GO:1902021,GO:2000145 - 0.00000000000004585 81.0
CMS3_k127_4995926_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 553.0
CMS3_k127_4995926_1 Phosphate-binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 477.0
CMS3_k127_4995926_2 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 294.0
CMS3_k127_5009287_0 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 383.0
CMS3_k127_5009287_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007684 253.0
CMS3_k127_5009287_2 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000005297 237.0
CMS3_k127_5009287_3 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000001415 232.0
CMS3_k127_5009287_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000001901 106.0
CMS3_k127_5011106_0 Spermidine synthase K00797 - 2.5.1.16 1.671e-220 713.0
CMS3_k127_5011106_1 4 iron, 4 sulfur cluster binding K02574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 451.0
CMS3_k127_5011106_2 - - - - 0.0000000000000000002476 93.0
CMS3_k127_5011106_3 - - - - 0.00000001249 59.0
CMS3_k127_5017483_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 539.0
CMS3_k127_5017483_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 387.0
CMS3_k127_5017483_2 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000004334 130.0
CMS3_k127_5017483_3 protein conserved in bacteria K01814 - 5.3.1.16 0.000000000000000000009192 91.0
CMS3_k127_5017483_4 RDD family - - - 0.00000000000001218 79.0
CMS3_k127_5018648_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 407.0
CMS3_k127_5018648_1 Domain of unknown function (DUF4931) K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 308.0
CMS3_k127_5018648_2 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000001815 231.0
CMS3_k127_5018648_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000008768 206.0
CMS3_k127_5072950_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 580.0
CMS3_k127_5072950_1 - - - - 0.0000000000001351 73.0
CMS3_k127_5072950_2 Protein of unknown function (DUF2892) - - - 0.00000752 52.0
CMS3_k127_5102266_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1217.0
CMS3_k127_5102266_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 333.0
CMS3_k127_5102266_2 diguanylate cyclase - - - 0.0001801 54.0
CMS3_k127_5102419_0 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 2.988e-224 704.0
CMS3_k127_5102419_1 Lysine methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 307.0
CMS3_k127_5102419_2 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 301.0
CMS3_k127_5102419_3 Lipase (class 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000006079 229.0
CMS3_k127_5102419_4 nuclease - - - 0.000000000009641 70.0
CMS3_k127_5115519_0 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000001079 199.0
CMS3_k127_5115519_1 SurA N-terminal domain - - - 0.00000000000000000000000000000000000000000000001214 179.0
CMS3_k127_5115519_2 - - - - 0.0000000000000000000000000039 128.0
CMS3_k127_512940_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 557.0
CMS3_k127_512940_1 ABC-type Mn2 Zn2 transport systems, permease K02075,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 328.0
CMS3_k127_512940_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000002994 248.0
CMS3_k127_512940_3 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000000000000003239 214.0
CMS3_k127_512940_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000001364 167.0
CMS3_k127_5137624_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 486.0
CMS3_k127_5137624_1 COGs COG0790 FOG TPR repeat SEL1 subfamily - - - 0.00000000000000000000000000000000007243 151.0
CMS3_k127_5137624_2 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.0001331 52.0
CMS3_k127_5157630_0 Sensors of blue-light using FAD - - - 0.0 1028.0
CMS3_k127_5157630_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 4.504e-269 833.0
CMS3_k127_5157630_2 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 357.0
CMS3_k127_5157630_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 299.0
CMS3_k127_5157630_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000002827 131.0
CMS3_k127_5157630_5 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.000000000000001832 81.0
CMS3_k127_5162389_0 protein conserved in bacteria - - - 6.37e-196 622.0
CMS3_k127_5162389_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 591.0
CMS3_k127_5162389_2 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000003297 237.0
CMS3_k127_5162389_3 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001233 228.0
CMS3_k127_5162389_4 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000002657 207.0
CMS3_k127_5162389_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000008601 92.0
CMS3_k127_5162389_6 protein-(glutamine-N5) methyltransferase activity K02493,K07566 - 2.1.1.297,2.7.7.87 0.00000003286 64.0
CMS3_k127_5163585_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006953 276.0
CMS3_k127_5163585_1 repeat protein - - - 0.00000000000000000000000000005106 125.0
CMS3_k127_5163585_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000005935 119.0
CMS3_k127_5163585_3 Collagen triple helix repeat (20 copies) - - - 0.00000004518 64.0
CMS3_k127_5163585_4 Cytochrome c554 and c-prime - - - 0.000007199 51.0
CMS3_k127_5164875_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K13487 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 336.0
CMS3_k127_5164875_1 Methyltransferase, chemotaxis proteins K13486 - - 0.0000000000000000000000000000000000000000000000001921 182.0
CMS3_k127_5164875_2 COG0835 Chemotaxis signal transduction protein K13488 - - 0.00000000000000000000000001434 114.0
CMS3_k127_5164875_3 - - - - 0.00000000000000000000008382 102.0
CMS3_k127_5164875_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.00000000005002 63.0
CMS3_k127_5175255_0 radical SAM domain protein K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 421.0
CMS3_k127_5175255_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 336.0
CMS3_k127_5175255_2 cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 325.0
CMS3_k127_5175255_3 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 298.0
CMS3_k127_5175255_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002077 263.0
CMS3_k127_5175255_5 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000356 258.0
CMS3_k127_5175255_6 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively - - - 0.000000000000000000000000000000000000000000000002205 183.0
CMS3_k127_5175255_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02668 - 2.7.13.3 0.00000000000000000000000001732 113.0
CMS3_k127_5175255_8 - K06950 - - 0.000786 45.0
CMS3_k127_5182031_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 457.0
CMS3_k127_5182031_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 343.0
CMS3_k127_5182031_2 Methyl-accepting chemotaxis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006111 293.0
CMS3_k127_5182031_3 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000001187 121.0
CMS3_k127_5182031_4 - - - - 0.0000000000002116 79.0
CMS3_k127_5200978_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008841 561.0
CMS3_k127_5200978_1 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000001044 239.0
CMS3_k127_5200978_2 PFAM cytochrome c - - - 0.00000000000000000000000000000000000000000000000000001317 196.0
CMS3_k127_5200978_3 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000007755 168.0
CMS3_k127_5200978_4 cytochrome - - - 0.0000000000000000000002215 104.0
CMS3_k127_5205898_0 CARDB domain-containing protein,subtilase family protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000001095 256.0
CMS3_k127_5205898_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000137 87.0
CMS3_k127_5222069_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 6.734e-211 660.0
CMS3_k127_5222069_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 447.0
CMS3_k127_5222069_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 335.0
CMS3_k127_5222069_3 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004539 267.0
CMS3_k127_5222069_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002126 258.0
CMS3_k127_5222069_5 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.000000000000000000000000000000000000000000000000000002153 195.0
CMS3_k127_5222069_6 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000147 128.0
CMS3_k127_5234339_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 392.0
CMS3_k127_5234339_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000357 293.0
CMS3_k127_5247960_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 375.0
CMS3_k127_5247960_1 photosynthesis - - - 0.00000000000000000000000000000000000006802 151.0
CMS3_k127_5247960_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000001005 145.0
CMS3_k127_5247960_3 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000001586 108.0
CMS3_k127_5273342_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 3.252e-220 696.0
CMS3_k127_5273342_1 Carboxysome Shell Carbonic Anhydrase - - - 3.827e-208 658.0
CMS3_k127_5273342_10 Pterin 4 alpha carbinolamine dehydratase - - - 0.000000000000000000000004493 104.0
CMS3_k127_5273342_2 LysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 525.0
CMS3_k127_5273342_3 BMC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 358.0
CMS3_k127_5273342_4 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005216 264.0
CMS3_k127_5273342_5 carboxysome shell protein - - - 0.0000000000000000000000000000000000000000000000000001133 187.0
CMS3_k127_5273342_6 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000001799 192.0
CMS3_k127_5273342_7 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.00000000000000000000000000000000000000000000000001512 180.0
CMS3_k127_5273342_8 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.000000000000000000000000000000000000000004738 155.0
CMS3_k127_5273342_9 Ethanolamine utilisation protein EutN/carboxysome - - - 0.000000000000000000000000000000004346 130.0
CMS3_k127_5280029_1 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000002646 187.0
CMS3_k127_5280029_2 FAD linked oxidases, C-terminal domain K06911 - - 0.00000000000000000000000000008307 117.0
CMS3_k127_5280029_3 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000003787 85.0
CMS3_k127_5289040_0 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 559.0
CMS3_k127_5289040_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 338.0
CMS3_k127_5289040_2 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000005181 120.0
CMS3_k127_5289040_3 DamX domain protein - - - 0.0002307 53.0
CMS3_k127_5294461_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 340.0
CMS3_k127_5294461_1 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 300.0
CMS3_k127_5294461_2 Protein of unknown function (DUF3012) - - - 0.0000000000000134 76.0
CMS3_k127_5300_0 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 500.0
CMS3_k127_5300_1 Putative peptidoglycan binding domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 471.0
CMS3_k127_5300_2 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000008211 164.0
CMS3_k127_5300_4 sequence-specific DNA binding K09384 - - 0.0000000000000000003652 91.0
CMS3_k127_5300_5 Type II secretion system protein B K02451 - - 0.00000000005087 72.0
CMS3_k127_5322248_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 426.0
CMS3_k127_5322248_1 ABC transporter ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 353.0
CMS3_k127_5322248_10 - - - - 0.00000000000000000002269 98.0
CMS3_k127_5322248_11 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000001017 84.0
CMS3_k127_5322248_12 ketosteroid isomerase - - - 0.00007765 49.0
CMS3_k127_5322248_2 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 327.0
CMS3_k127_5322248_3 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000051 252.0
CMS3_k127_5322248_4 protein conserved in bacteria K09966 - - 0.00000000000000000000000000000000000000000000000000000002336 199.0
CMS3_k127_5322248_5 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000000000000000000002356 196.0
CMS3_k127_5322248_6 protein conserved in bacteria K09984 - - 0.00000000000000000000000000000000000000004744 153.0
CMS3_k127_5322248_7 photoreceptor activity K02490 - - 0.0000000000000000000000000000000000914 136.0
CMS3_k127_5322248_8 Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000002361 132.0
CMS3_k127_5322248_9 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.000000000000000000000001976 110.0
CMS3_k127_536606_0 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 483.0
CMS3_k127_536606_1 Domain of unknown function (DUF4263) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 289.0
CMS3_k127_536606_2 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0002332 50.0
CMS3_k127_5369805_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 566.0
CMS3_k127_5369805_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 302.0
CMS3_k127_5373766_0 COG0608 Single-stranded DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 3.035e-212 674.0
CMS3_k127_5373766_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 533.0
CMS3_k127_5373766_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 397.0
CMS3_k127_5373766_3 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002703 274.0
CMS3_k127_5373766_4 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000041 83.0
CMS3_k127_5397091_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 360.0
CMS3_k127_5397091_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001089 286.0
CMS3_k127_5397091_2 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000001678 145.0
CMS3_k127_5397091_3 flagellar K02404 - - 0.00002221 51.0
CMS3_k127_541833_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.667e-262 812.0
CMS3_k127_541833_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 3.12e-208 658.0
CMS3_k127_541833_2 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 353.0
CMS3_k127_541833_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000002473 206.0
CMS3_k127_541833_4 general secretion pathway protein K02458,K10924,K10925 - - 0.0000000000000000000007009 98.0
CMS3_k127_541833_5 Domain of unknown function (DUF4124) - - - 0.00001443 54.0
CMS3_k127_541833_6 Prokaryotic N-terminal methylation motif K10925 - - 0.00007285 51.0
CMS3_k127_5420758_0 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 473.0
CMS3_k127_5420758_1 MerR, DNA binding K08365 - - 0.0000000000000000000000000000000000000000000000000006041 187.0
CMS3_k127_5420758_2 membrane - - - 0.000000000000000000000000000000000000000000000000002432 189.0
CMS3_k127_5420758_3 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000000000000000000000000000000002251 169.0
CMS3_k127_5420758_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000182 130.0
CMS3_k127_5420758_5 MerT mercuric transport protein K08363 - - 0.0000000000000000000000000000002788 126.0
CMS3_k127_5420758_6 Cytochrome c class I - - - 0.00000000000000000000000000000807 128.0
CMS3_k127_5420758_7 Thioredoxin domain - - - 0.00000000000000000000000006113 109.0
CMS3_k127_5420758_8 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.00000000000000009898 83.0
CMS3_k127_5420758_9 manually curated - - - 0.0000000007539 64.0
CMS3_k127_548181_0 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 372.0
CMS3_k127_548181_1 FtsX-like permease family K02004 - - 0.00000000000000000000000004844 109.0
CMS3_k127_548181_2 cheY-homologous receiver domain K03413 - - 0.0000000000000000000003823 100.0
CMS3_k127_5484102_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 460.0
CMS3_k127_5484102_1 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 389.0
CMS3_k127_5484102_2 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009559 265.0
CMS3_k127_5484102_3 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.000000000000000000000000000000000000000000000000000000000000000001149 230.0
CMS3_k127_5484102_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000000000000000000000000000000001144 206.0
CMS3_k127_5484102_5 - - - - 0.000000000000000000000000000000000000000000000000000001602 203.0
CMS3_k127_5484102_6 - - - - 0.0000000000000000000000000001012 119.0
CMS3_k127_5484102_8 - - - - 0.0000001113 64.0
CMS3_k127_55001_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000009173 290.0
CMS3_k127_55001_1 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000001903 186.0
CMS3_k127_5525230_0 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 300.0
CMS3_k127_5525230_1 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000008849 211.0
CMS3_k127_5525230_2 peptidase K07260 - 3.4.17.14 0.000000000000000000000000000000000000000000001771 170.0
CMS3_k127_5525230_3 Belongs to the Nudix hydrolase family K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000000000000000004035 133.0
CMS3_k127_5525230_4 Belongs to the P(II) protein family - - - 0.0000000000003898 74.0
CMS3_k127_5527741_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 302.0
CMS3_k127_5527741_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000001106 208.0
CMS3_k127_5527741_2 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000004431 200.0
CMS3_k127_5527741_3 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000005606 181.0
CMS3_k127_5527741_4 - - - - 0.000000000000000000000000000000000004461 141.0
CMS3_k127_5527741_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000001185 126.0
CMS3_k127_5534274_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 3.308e-204 638.0
CMS3_k127_5534274_1 synthase K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 559.0
CMS3_k127_5534274_10 Acylneuraminate cytidylyltransferase K18431 - 2.7.7.82 0.0000000000000000000000000000000000000000000000000002051 194.0
CMS3_k127_5534274_11 epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000622 180.0
CMS3_k127_5534274_12 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000003865 121.0
CMS3_k127_5534274_13 - - - - 0.00000000000000009066 94.0
CMS3_k127_5534274_14 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000007035 69.0
CMS3_k127_5534274_15 RNA cap guanine-N2 methyltransferase - - - 0.00001588 55.0
CMS3_k127_5534274_2 PFAM ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 530.0
CMS3_k127_5534274_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 486.0
CMS3_k127_5534274_4 Glycosyl Transferase K13684 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0008610,GO:0008653,GO:0008921,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035250,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 414.0
CMS3_k127_5534274_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 342.0
CMS3_k127_5534274_6 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 341.0
CMS3_k127_5534274_7 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 296.0
CMS3_k127_5534274_8 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007771 281.0
CMS3_k127_5534274_9 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000003332 251.0
CMS3_k127_5544606_0 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 398.0
CMS3_k127_5544606_1 ABC transporter permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 389.0
CMS3_k127_5544606_2 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000002217 199.0
CMS3_k127_5544606_3 Outer membrane efflux protein - - - 0.0000000000000113 79.0
CMS3_k127_5573150_0 Putative diguanylate phosphodiesterase K21025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 493.0
CMS3_k127_5573150_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 370.0
CMS3_k127_5573150_2 - - - - 0.00000000000002892 82.0
CMS3_k127_5579597_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 327.0
CMS3_k127_5579597_1 histidine kinase HAMP region domain protein K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000036 233.0
CMS3_k127_5579597_2 TamB, inner membrane protein subunit of TAM complex K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.000007799 58.0
CMS3_k127_5590555_0 PFAM von Willebrand factor type A - - - 0.0 1242.0
CMS3_k127_5590555_1 PFAM AAA domain (dynein-related subfamily) K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 488.0
CMS3_k127_5590555_2 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000003901 217.0
CMS3_k127_5590555_3 - - - - 0.00000000000000000000000000000000000000001592 154.0
CMS3_k127_5590555_4 - - - - 0.00000000000000000000299 96.0
CMS3_k127_5623702_0 Putative zinc-binding metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 335.0
CMS3_k127_5623702_1 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 312.0
CMS3_k127_5623702_2 - - - - 0.00000000000000000000000000000000000001407 151.0
CMS3_k127_5623702_3 Transcription factor zinc-finger - - - 0.0000000000000000000000000000000000004065 143.0
CMS3_k127_5623702_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000001094 130.0
CMS3_k127_56854_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 8.489e-209 657.0
CMS3_k127_56854_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.521e-195 620.0
CMS3_k127_56854_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 543.0
CMS3_k127_56854_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 391.0
CMS3_k127_56854_4 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 362.0
CMS3_k127_56854_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000003413 230.0
CMS3_k127_56854_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000008036 205.0
CMS3_k127_56854_7 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000001129 158.0
CMS3_k127_5734328_0 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 616.0
CMS3_k127_5734328_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 548.0
CMS3_k127_5734328_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 483.0
CMS3_k127_5734328_3 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 323.0
CMS3_k127_5734328_4 PFAM NUDIX hydrolase K08312 - - 0.0000000000000000000000000000000000000000000000000000000000000481 219.0
CMS3_k127_5734328_5 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000001692 186.0
CMS3_k127_5734328_6 Belongs to the bacterial histone-like protein family - - - 0.00000000000000000000000000000000000005097 146.0
CMS3_k127_5734328_7 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000006801 116.0
CMS3_k127_5734328_8 PrcB C-terminal - - - 0.0002373 50.0
CMS3_k127_5747851_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 4.609e-202 649.0
CMS3_k127_5747851_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 376.0
CMS3_k127_5747851_2 Protein of unknown function (DUF2914) - - - 0.000000000000000000001472 102.0
CMS3_k127_5751082_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1212.0
CMS3_k127_5751082_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 4.885e-215 673.0
CMS3_k127_5751082_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 565.0
CMS3_k127_5751082_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000001631 214.0
CMS3_k127_5751082_4 Modulates RecA activity K03565 - - 0.00000000000000000000000000000004508 130.0
CMS3_k127_5751082_5 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000001073 101.0
CMS3_k127_5751082_6 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.0000001026 58.0
CMS3_k127_5755250_0 Belongs to the UPF0753 family K09822 - - 0.0 1223.0
CMS3_k127_5755250_1 PFAM Sulfate transporter family K03321 - - 1.857e-215 682.0
CMS3_k127_5755250_10 - - - - 0.0000000000000000000001318 106.0
CMS3_k127_5755250_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 383.0
CMS3_k127_5755250_3 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008751 355.0
CMS3_k127_5755250_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000005236 246.0
CMS3_k127_5755250_5 Belongs to the P(II) protein family - - - 0.000000000000000000000000000000000000000000000000000000005724 199.0
CMS3_k127_5755250_6 acetyltransferase - - - 0.0000000000000000000000000000000000000000000001603 171.0
CMS3_k127_5755250_7 - - - - 0.000000000000000000000000000000006669 130.0
CMS3_k127_5755250_8 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000001068 132.0
CMS3_k127_5755250_9 - - - - 0.00000000000000000000000000002865 121.0
CMS3_k127_5760393_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 495.0
CMS3_k127_5760393_1 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 361.0
CMS3_k127_5760393_2 domain, Protein K03112 - - 0.00000000000000000000000000000000000000003322 171.0
CMS3_k127_5760393_3 - - - - 0.00000000000000001687 85.0
CMS3_k127_5760393_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0001416 44.0
CMS3_k127_5767448_0 - - - - 0.0 1384.0
CMS3_k127_5767448_1 Domain of unknown function (DUF3400) - - - 3.568e-234 734.0
CMS3_k127_5767448_10 Domain of unknown function (DUF5063) - - - 0.0000000000002 76.0
CMS3_k127_5767448_2 Tripartite tricarboxylate transporter TctA family K07793 - - 7.736e-199 631.0
CMS3_k127_5767448_3 Chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 476.0
CMS3_k127_5767448_4 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 386.0
CMS3_k127_5767448_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 307.0
CMS3_k127_5767448_6 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 295.0
CMS3_k127_5767448_7 membrane K08973 - - 0.00000000000000000000000000000000000000000000000001353 183.0
CMS3_k127_5767448_8 Membrane - - - 0.0000000000000000000000000000000000008232 143.0
CMS3_k127_5767448_9 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000007873 96.0
CMS3_k127_5782336_0 Di-haem cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 388.0
CMS3_k127_5782336_1 TIGRFAM channel protein, hemolysin III family K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
CMS3_k127_5782336_2 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 310.0
CMS3_k127_5782336_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000139 214.0
CMS3_k127_5782336_4 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000005917 174.0
CMS3_k127_5782336_5 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000001651 160.0
CMS3_k127_5782336_6 Type II transport protein GspH K08084 - - 0.00000000000000000000000007758 113.0
CMS3_k127_5782336_7 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000000004161 81.0
CMS3_k127_5785397_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.944e-199 629.0
CMS3_k127_5785397_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 604.0
CMS3_k127_5785397_10 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000002672 100.0
CMS3_k127_5785397_11 - - - - 0.000000000001128 71.0
CMS3_k127_5785397_12 Tetratricopeptide repeat - - - 0.000000000009702 70.0
CMS3_k127_5785397_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 513.0
CMS3_k127_5785397_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 442.0
CMS3_k127_5785397_4 thiamine transport K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 407.0
CMS3_k127_5785397_5 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 379.0
CMS3_k127_5785397_6 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002491 262.0
CMS3_k127_5785397_7 Cupin - - - 0.0000000000000000000000000000000000000000000000001163 181.0
CMS3_k127_5785397_8 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000002911 183.0
CMS3_k127_5785397_9 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000006102 155.0
CMS3_k127_5785627_0 Signal transduction histidine kinase K03407 - 2.7.13.3 2.242e-200 645.0
CMS3_k127_5785627_1 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000005426 180.0
CMS3_k127_5785627_2 antisigma factor binding K04749,K06378 - - 0.000000001652 62.0
CMS3_k127_5785627_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000006787 58.0
CMS3_k127_5796137_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000001358 191.0
CMS3_k127_5796137_1 - - - - 0.000000000000000000000000000000000000000000006695 173.0
CMS3_k127_5796137_2 Protein conserved in bacteria - - - 0.0000002538 57.0
CMS3_k127_5796137_3 Salt-induced outer membrane protein K07283 - - 0.00001206 47.0
CMS3_k127_5802509_0 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 333.0
CMS3_k127_5807773_0 TraB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 511.0
CMS3_k127_5807773_1 ABC transporter transmembrane region K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 398.0
CMS3_k127_5807773_2 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
CMS3_k127_5807773_3 cellulase activity - - - 0.000000002913 62.0
CMS3_k127_5815829_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 5.085e-241 748.0
CMS3_k127_5815829_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 359.0
CMS3_k127_5815829_2 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002732 279.0
CMS3_k127_5815829_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000004391 167.0
CMS3_k127_5815829_6 Protein of unknown function (DUF2934) - - - 0.000000989 55.0
CMS3_k127_5835702_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 4.231e-200 630.0
CMS3_k127_5847498_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000001433 192.0
CMS3_k127_5847498_1 Domain of unknown function (DUF4156) - - - 0.0000000000000000002293 91.0
CMS3_k127_5847498_2 Outer membrane protein beta-barrel domain - - - 0.0000000000000257 79.0
CMS3_k127_5847498_3 Outer membrane protein beta-barrel domain - - - 0.00001543 53.0
CMS3_k127_5847498_4 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.0000879 45.0
CMS3_k127_5847806_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000154 259.0
CMS3_k127_5847806_1 DNA topological change - - - 0.000000000000000000000000002425 119.0
CMS3_k127_5854564_0 transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 401.0
CMS3_k127_5854564_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 356.0
CMS3_k127_5854564_10 Propeptide PepSY amd peptidase M4 - - - 0.0000000000000000005202 90.0
CMS3_k127_5854564_11 Putative transposase - - - 0.0000000004153 63.0
CMS3_k127_5854564_12 Putative transposase - - - 0.00001476 52.0
CMS3_k127_5854564_2 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 329.0
CMS3_k127_5854564_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 297.0
CMS3_k127_5854564_4 Cytochrome b/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000003445 228.0
CMS3_k127_5854564_5 Protein of unknown function (DUF533) - - - 0.000000000000000000000000000000000000000000000000000004966 198.0
CMS3_k127_5854564_6 PFAM Di-haem cytochrome c - - - 0.00000000000000000000000000000000000000001857 158.0
CMS3_k127_5854564_7 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000001122 125.0
CMS3_k127_5854564_8 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000002872 103.0
CMS3_k127_5854564_9 Pfam Methyltransferase - - - 0.000000000000000000005784 102.0
CMS3_k127_5880514_0 Histidine Phosphotransfer domain K13490 - - 8.448e-215 691.0
CMS3_k127_5880514_1 CheB methylesterase K13491 - 3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 312.0
CMS3_k127_5880514_2 Chemotaxis signal transduction protein K13489 - - 0.0000000000000000000000000000000000000000223 160.0
CMS3_k127_5880514_3 Chemotaxis protein CheR K00575,K13486 - 2.1.1.80 0.000000000000005703 79.0
CMS3_k127_5882054_0 Oxaloacetate K01960 - 6.4.1.1 7.449e-212 664.0
CMS3_k127_5882054_1 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
CMS3_k127_5882054_2 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001093 276.0
CMS3_k127_5882054_3 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000000000000004287 256.0
CMS3_k127_5882054_4 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000002789 245.0
CMS3_k127_5924135_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 4.152e-212 664.0
CMS3_k127_5924135_1 PFAM Citrate transporter - - - 6.841e-199 629.0
CMS3_k127_5924135_2 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 582.0
CMS3_k127_5924135_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000004175 203.0
CMS3_k127_5951198_0 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 4.611e-212 691.0
CMS3_k127_5951198_1 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000002174 235.0
CMS3_k127_5951198_2 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000002836 212.0
CMS3_k127_5951198_3 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000007642 145.0
CMS3_k127_5951198_4 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000000000002962 120.0
CMS3_k127_5951198_5 Uncharacterized ACR, COG1678 - - - 0.000000000000000000000000007277 118.0
CMS3_k127_5951198_6 diguanylate cyclase - - - 0.00000000000000002795 93.0
CMS3_k127_5951362_0 chemotaxis, protein K02660 - - 3.055e-215 687.0
CMS3_k127_5951362_1 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 488.0
CMS3_k127_5951362_2 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000001787 263.0
CMS3_k127_5951362_3 response regulator K02657 - - 0.0000000000000000000000000000000000000000000000000000002198 194.0
CMS3_k127_5951362_4 response regulator receiver K02658 - - 0.000000000000000000000000000000000000000000000001905 175.0
CMS3_k127_5951362_5 Chemotaxis signal transduction protein K02659 - - 0.0000000000000000000000000000000000000008689 154.0
CMS3_k127_5955855_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 330.0
CMS3_k127_5955855_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000001013 240.0
CMS3_k127_5955855_2 signal peptide protein - - - 0.0000000000000000000000000000000000000000000000002565 186.0
CMS3_k127_5955855_3 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000002853 160.0
CMS3_k127_5955855_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000001886 141.0
CMS3_k127_5955855_5 Domain of unknown function (DUF5062) - - - 0.000000000000000000000000000000000005688 137.0
CMS3_k127_5956102_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding K01652 - 2.2.1.6 2.108e-250 779.0
CMS3_k127_5956102_1 Macrophage migration inhibitory factor (MIF) - - - 0.0000000000000000000000000000002693 126.0
CMS3_k127_5956102_2 Protein of unknown function (DUF3579) - - - 0.0000000000000000000000006239 108.0
CMS3_k127_5956102_3 cheY-homologous receiver domain K03413 - - 0.000000000000000000001853 98.0
CMS3_k127_596207_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 429.0
CMS3_k127_596207_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000001433 149.0
CMS3_k127_596207_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000131 147.0
CMS3_k127_596207_3 Redoxin domain protein - - - 0.00000000000000000000000000000000000008225 148.0
CMS3_k127_5962590_0 Saccharopine dehydrogenase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 351.0
CMS3_k127_5962590_1 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 299.0
CMS3_k127_5962590_2 Oxidoreductase FAD-binding domain K14581 - 1.18.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 300.0
CMS3_k127_5962590_3 Group 1 truncated hemoglobin K06886 - - 0.000000000000000000000000000000000000000000000000000000000000002326 218.0
CMS3_k127_5962590_4 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000000000001504 205.0
CMS3_k127_5966685_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 356.0
CMS3_k127_5966685_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 285.0
CMS3_k127_5966685_2 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002764 244.0
CMS3_k127_5966685_3 protein conserved in bacteria - - - 0.0000000000000000000000000001775 121.0
CMS3_k127_5966685_4 peptidase K06194 - - 0.0000000002936 66.0
CMS3_k127_5977847_0 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 445.0
CMS3_k127_5977847_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 293.0
CMS3_k127_5977847_10 Acid phosphatase homologues - - - 0.00000000000000000000001185 112.0
CMS3_k127_5977847_11 - - - - 0.0000000000000000000001128 107.0
CMS3_k127_5977847_12 NnrU protein - - - 0.00000000000000000003723 91.0
CMS3_k127_5977847_13 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000001895 104.0
CMS3_k127_5977847_2 Belongs to the ompA family K12216 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001411 245.0
CMS3_k127_5977847_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000002358 237.0
CMS3_k127_5977847_4 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000001617 222.0
CMS3_k127_5977847_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000001807 212.0
CMS3_k127_5977847_6 - - - - 0.0000000000000000000000000000000000000000000000003747 177.0
CMS3_k127_5977847_7 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000001592 185.0
CMS3_k127_5977847_8 homoserine kinase type II (protein kinase fold) - - - 0.0000000000000000000000000000000000000000002452 171.0
CMS3_k127_5977847_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000001297 131.0
CMS3_k127_5990642_0 Transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 434.0
CMS3_k127_5990642_1 Pyridine nucleotide-disulphide oxidoreductase K05297 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 369.0
CMS3_k127_5990642_2 COG2897 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
CMS3_k127_5990642_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007226 267.0
CMS3_k127_5990642_4 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K11890,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000002741 243.0
CMS3_k127_5990642_5 TIGRFAM type IV pilus modification protein PilV K02671 - - 0.000000000000000000000000000005856 127.0
CMS3_k127_5990642_6 Pilus assembly protein K08084 - - 0.0000000000000000005369 94.0
CMS3_k127_6000433_0 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 395.0
CMS3_k127_6000433_1 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 349.0
CMS3_k127_6000433_2 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000000000000000000000000000001314 195.0
CMS3_k127_6000433_3 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000006895 147.0
CMS3_k127_6000433_4 FeS assembly SUF system protein - - - 0.0000000000000000000000000000000000003552 143.0
CMS3_k127_6002804_0 Multidrug ABC transporter ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 460.0
CMS3_k127_6002804_1 DNA alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 381.0
CMS3_k127_6002804_2 Alkylphosphonate utilization operon protein PhnA K06193 - - 0.0000000000000000000000000000000000000000000000000000000009927 201.0
CMS3_k127_6002804_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000001518 204.0
CMS3_k127_6002804_4 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000000002025 201.0
CMS3_k127_6002804_5 MaoC like domain - - - 0.000000001039 59.0
CMS3_k127_6002804_6 Baseplate J-like protein - - - 0.000000004153 61.0
CMS3_k127_6005776_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0000287,GO:0003674,GO:0003824,GO:0004349,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019202,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0055129,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901973 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 486.0
CMS3_k127_6005776_1 chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001231 268.0
CMS3_k127_6005776_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000006995 109.0
CMS3_k127_6010166_0 Cysteine-rich domain - - - 6.069e-220 690.0
CMS3_k127_6010166_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 567.0
CMS3_k127_6010166_10 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
CMS3_k127_6010166_11 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000153 250.0
CMS3_k127_6010166_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000005653 239.0
CMS3_k127_6010166_13 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000004079 235.0
CMS3_k127_6010166_14 ECF sigma factor - - - 0.000000000000000000000000000000000008751 143.0
CMS3_k127_6010166_15 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000004955 140.0
CMS3_k127_6010166_16 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000002011 100.0
CMS3_k127_6010166_17 ankyrin repeat - - - 0.0000000000000000146 91.0
CMS3_k127_6010166_18 - - - - 0.0000000000000007366 79.0
CMS3_k127_6010166_19 EF-hand domain pair - - - 0.000000000267 69.0
CMS3_k127_6010166_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 537.0
CMS3_k127_6010166_20 Sel1-like repeats. K07126 - - 0.000000002364 64.0
CMS3_k127_6010166_21 FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6 - - - 0.00000002945 55.0
CMS3_k127_6010166_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 524.0
CMS3_k127_6010166_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 521.0
CMS3_k127_6010166_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 492.0
CMS3_k127_6010166_6 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 397.0
CMS3_k127_6010166_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 321.0
CMS3_k127_6010166_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 305.0
CMS3_k127_6010166_9 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005248 265.0
CMS3_k127_6017064_0 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 449.0
CMS3_k127_6017064_1 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 332.0
CMS3_k127_6017064_2 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 307.0
CMS3_k127_6017064_3 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002014 291.0
CMS3_k127_6017064_4 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
CMS3_k127_6017064_5 Domain of unknown function (DUF4266) - - - 0.000000000000000000002359 95.0
CMS3_k127_6017064_6 ubiE/COQ5 methyltransferase family - - - 0.000004674 53.0
CMS3_k127_6017064_7 COG2801 Transposase and inactivated derivatives K07497 - - 0.0006291 42.0
CMS3_k127_6021891_0 amine dehydrogenase activity - - - 0.0 1023.0
CMS3_k127_6045451_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 441.0
CMS3_k127_6045451_1 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 405.0
CMS3_k127_6045451_2 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 406.0
CMS3_k127_6045451_3 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01919,K01955,K03802 - 6.3.2.2,6.3.2.29,6.3.2.30,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 380.0
CMS3_k127_6045451_4 iron ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001529 308.0
CMS3_k127_6045451_5 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006337 274.0
CMS3_k127_6045451_6 carboxylic acid catabolic process K01856,K19802 - 5.1.1.20,5.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008952 282.0
CMS3_k127_6045451_7 Protein of unknown function (DUF2459) - - - 0.000000000000000000000000000000000000000000000000000000000000000001353 233.0
CMS3_k127_6045451_8 metal cluster binding - - - 0.000000000000000000000000000000006203 134.0
CMS3_k127_6045451_9 - - - - 0.00000000000000001218 88.0
CMS3_k127_6074661_0 COG4206 Outer membrane cobalamin receptor protein K16092 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - 1.292e-196 629.0
CMS3_k127_6074661_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001616 291.0
CMS3_k127_6074661_2 Protein of unknown function (DUF3301) - - - 0.000000000000000000002763 97.0
CMS3_k127_6074661_3 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000002267 91.0
CMS3_k127_6074661_4 Cysteine-rich CWC - - - 0.000000000000000002415 86.0
CMS3_k127_6090940_0 esterase of the alpha-beta hydrolase superfamily K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 306.0
CMS3_k127_6090940_1 transposase activity K07495 - - 0.0000000000009271 69.0
CMS3_k127_6090940_2 LysM domain - - - 0.00000001031 68.0
CMS3_k127_6094759_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 481.0
CMS3_k127_6094759_1 ATPase associated with various cellular activities, AAA_5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000693 285.0
CMS3_k127_6094759_2 Trypsin-like peptidase domain - - - 0.000000000000000000000000000001906 137.0
CMS3_k127_6094956_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 513.0
CMS3_k127_6094956_1 eight transmembrane protein EpsH - - - 0.0000000000000000000000000000000002872 146.0
CMS3_k127_6104982_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1112.0
CMS3_k127_6104982_1 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 309.0
CMS3_k127_6104982_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000005692 135.0
CMS3_k127_6104982_3 - - - - 0.0000000001004 63.0
CMS3_k127_6152954_0 Chemotaxis sensory transducer K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 374.0
CMS3_k127_6152954_1 cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 362.0
CMS3_k127_6152954_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006213 258.0
CMS3_k127_6152954_3 Sh3 type 3 domain protein K01361 - 3.4.21.96 0.00000000000000000000000000000000000000003242 162.0
CMS3_k127_6152954_5 protein contain chitin-binding domain type 3 - - - 0.00000000000005265 86.0
CMS3_k127_6152954_6 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000004976 68.0
CMS3_k127_6152954_7 Cytochrome c - - - 0.0002098 55.0
CMS3_k127_6158702_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 3.502e-252 782.0
CMS3_k127_6158702_1 Multi-copper - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 539.0
CMS3_k127_6158702_2 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 454.0
CMS3_k127_6158702_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 385.0
CMS3_k127_6158702_4 Cytochrome c K02305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001969 261.0
CMS3_k127_6158702_5 cytochrome C, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000836 252.0
CMS3_k127_6158702_6 transcriptional regulator, Rrf2 family K13771 - - 0.0000000000000000000000000000000000000000249 157.0
CMS3_k127_6158702_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000003096 134.0
CMS3_k127_6158702_8 - - - - 0.0000000000000000000001052 101.0
CMS3_k127_6175031_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009067 253.0
CMS3_k127_6175031_1 Diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000003504 124.0
CMS3_k127_6184510_0 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000003638 219.0
CMS3_k127_6184510_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000002556 210.0
CMS3_k127_6184510_2 Cytochrome c class I - - - 0.0000000000000000000000000000000007985 137.0
CMS3_k127_6184510_3 Sulfocyanin (SoxE) domain - - - 0.000000000000002624 82.0
CMS3_k127_6184510_4 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00009733 46.0
CMS3_k127_6184510_5 Glutathione S-transferase K00799 - 2.5.1.18 0.0002045 45.0
CMS3_k127_6208655_0 Chromate transporter K07240 - - 1.492e-219 689.0
CMS3_k127_6208655_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 1.692e-214 669.0
CMS3_k127_6208655_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007123 245.0
CMS3_k127_6208655_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001743 205.0
CMS3_k127_6208655_4 guanosine phosphorylase activity K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000002585 144.0
CMS3_k127_6208655_5 COG0457 FOG TPR repeat - - - 0.000000000000000000000002444 106.0
CMS3_k127_6208655_6 Type II secretion system K02653 - - 0.000001428 55.0
CMS3_k127_6232375_0 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 373.0
CMS3_k127_6232375_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 312.0
CMS3_k127_6232375_2 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000454 227.0
CMS3_k127_6232375_3 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.00000000000000000000000000000000000000000000000000000004236 216.0
CMS3_k127_6232375_4 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.00000000000002684 73.0
CMS3_k127_6239036_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000001104 194.0
CMS3_k127_6239036_1 Belongs to the BolA IbaG family K05527 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0022603,GO:0022604,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000323 131.0
CMS3_k127_6239036_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000003891 97.0
CMS3_k127_625854_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008545 433.0
CMS3_k127_625854_1 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000000000000000000000000000000000007431 149.0
CMS3_k127_625854_2 PFAM Plasmid maintenance system killer K07334 - - 0.000000000000000000000000000000000000746 141.0
CMS3_k127_625854_3 Amidohydrolase family - - - 0.000000000000000000000000000000000001301 147.0
CMS3_k127_625854_4 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000000000000000000001425 149.0
CMS3_k127_625854_5 Amidohydrolase family - - - 0.0000000000000000000000000000001484 132.0
CMS3_k127_625854_6 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000001685 119.0
CMS3_k127_625854_8 copG family - - - 0.000000000000000000007122 94.0
CMS3_k127_625854_9 Transposase IS116/IS110/IS902 family - - - 0.0000000002319 65.0
CMS3_k127_6264132_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 9.274e-279 875.0
CMS3_k127_6264132_1 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000001498 146.0
CMS3_k127_6264132_2 Excalibur calcium-binding domain - - - 0.000000000000000000002144 95.0
CMS3_k127_6264132_3 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000002269 66.0
CMS3_k127_6264132_4 Integrase, catalytic region - - - 0.000000002803 59.0
CMS3_k127_6264132_5 lipolytic protein G-D-S-L family K20306 - - 0.0000002459 63.0
CMS3_k127_6271601_0 Glycosyl transferases group 1 K21001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007934 270.0
CMS3_k127_6271601_1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - - - 0.0000000000000000000000000000000000000000000000000000000000000001661 236.0
CMS3_k127_6271601_2 Low molecular weight protein-tyrosine-phosphatase K01104 - 3.1.3.48 0.000000000000002537 82.0
CMS3_k127_6273954_0 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 613.0
CMS3_k127_6273954_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 411.0
CMS3_k127_6276046_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 8.259e-198 625.0
CMS3_k127_6276046_1 electron transfer activity K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 393.0
CMS3_k127_6276046_10 - - - - 0.00000001012 63.0
CMS3_k127_6276046_2 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 363.0
CMS3_k127_6276046_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000008081 265.0
CMS3_k127_6276046_4 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.000000000000000000000000000000000000000000000000000000000000001699 246.0
CMS3_k127_6276046_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000000000000000000000000000001816 199.0
CMS3_k127_6276046_6 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000000000000000000000000008932 175.0
CMS3_k127_6276046_7 Hemimethylated DNA-binding protein YccV like K11940 - - 0.00000000000000000000000000000000003391 137.0
CMS3_k127_6276046_8 YtkA-like - - - 0.000000000000000000000000002603 118.0
CMS3_k127_6276046_9 Outer membrane protein beta-barrel domain - - - 0.000000002694 66.0
CMS3_k127_6279158_0 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 443.0
CMS3_k127_6279158_1 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 304.0
CMS3_k127_6279158_2 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000002487 179.0
CMS3_k127_6279158_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000001968 170.0
CMS3_k127_6307033_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1085.0
CMS3_k127_6307033_1 MMPL family K07003 - - 1.244e-273 862.0
CMS3_k127_6307033_10 - - - - 0.0000000000000000000000000007893 116.0
CMS3_k127_6307033_11 Belongs to the peptidase S1C family K04691,K04772 - - 0.00000006117 57.0
CMS3_k127_6307033_2 COG3666 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 584.0
CMS3_k127_6307033_3 lysine 2,3-aminomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 552.0
CMS3_k127_6307033_4 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 518.0
CMS3_k127_6307033_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 471.0
CMS3_k127_6307033_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 444.0
CMS3_k127_6307033_7 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 334.0
CMS3_k127_6307033_8 Outer membrane protein W K07275 - - 0.000000000000000000000000000000000000000000000000000005378 198.0
CMS3_k127_6307033_9 Transcriptional regulator - - - 0.00000000000000000000000000005016 124.0
CMS3_k127_6311003_0 GGDEF domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 337.0
CMS3_k127_6311003_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 330.0
CMS3_k127_6311003_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001047 255.0
CMS3_k127_6311003_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000004739 180.0
CMS3_k127_6311003_4 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000006776 130.0
CMS3_k127_6311003_5 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000002296 74.0
CMS3_k127_6311185_0 Neisseria PilC beta-propeller domain K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 585.0
CMS3_k127_6311185_1 Prepilin-type cleavage methylation-like K02672 - - 0.000000000000000000000000000000419 135.0
CMS3_k127_6311185_2 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000002453 87.0
CMS3_k127_6311185_3 - - - - 0.00003051 52.0
CMS3_k127_6319441_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 403.0
CMS3_k127_6319441_1 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 350.0
CMS3_k127_6319441_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001214 261.0
CMS3_k127_6319441_3 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000000000001853 200.0
CMS3_k127_6319441_4 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000001371 179.0
CMS3_k127_6333318_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 405.0
CMS3_k127_6333318_1 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 336.0
CMS3_k127_6333318_2 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000101 234.0
CMS3_k127_6333318_3 Carboxypeptidase - - - 0.00000000000000000000001699 107.0
CMS3_k127_6395158_0 TIGRFAM ribonuclease, Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 368.0
CMS3_k127_6395158_1 TIGRFAM TIGR02099 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001085 259.0
CMS3_k127_6400177_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 571.0
CMS3_k127_6400177_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000003197 123.0
CMS3_k127_6416585_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 309.0
CMS3_k127_6416585_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003696 269.0
CMS3_k127_6416585_2 Outer membrane protein beta-barrel domain - - - 0.00000000001892 72.0
CMS3_k127_644256_0 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 398.0
CMS3_k127_644256_1 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002457 256.0
CMS3_k127_644256_2 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000937 215.0
CMS3_k127_644256_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000009834 184.0
CMS3_k127_644256_4 Ferredoxin - - - 0.0000000000000000000000000000000000000000006428 160.0
CMS3_k127_644256_5 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.0000000000000000000000000000000003087 135.0
CMS3_k127_644256_6 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00001098 48.0
CMS3_k127_6442674_0 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008463 577.0
CMS3_k127_6442674_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0001147 45.0
CMS3_k127_6453739_0 NB-ARC domain - - - 0.000000000000000000000000000000000000000000000000007197 207.0
CMS3_k127_6461044_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 1.927e-279 872.0
CMS3_k127_6461044_1 - - - - 0.0000000000000000000000000000001353 134.0
CMS3_k127_6461044_2 Belongs to the 'phage' integrase family - - - 0.000000000000000000001561 95.0
CMS3_k127_6479532_0 L COG3666 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 587.0
CMS3_k127_6479532_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005314 317.0
CMS3_k127_6479532_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 302.0
CMS3_k127_6479532_3 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000001401 193.0
CMS3_k127_6479753_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 4.737e-228 715.0
CMS3_k127_6479753_1 Pyridoxal-dependent decarboxylase conserved domain K13745 - 4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 594.0
CMS3_k127_6479753_2 DsrE/DsrF-like family K06039,K07092 - - 0.00000000000000000008285 93.0
CMS3_k127_6479753_3 4Fe-4S dicluster domain - - - 0.00002409 54.0
CMS3_k127_6524885_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 419.0
CMS3_k127_6524885_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 359.0
CMS3_k127_6524885_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 307.0
CMS3_k127_6524885_3 COG3103 SH3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000001673 221.0
CMS3_k127_6524885_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000004646 200.0
CMS3_k127_6524885_5 - - - - 0.000000000000000000000000000000000000000000000000000002219 196.0
CMS3_k127_6524885_6 Thioredoxin-like - - - 0.00000000000000000000000000000000000000003343 157.0
CMS3_k127_6542795_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 406.0
CMS3_k127_6542795_1 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 298.0
CMS3_k127_6542795_2 PFAM heat shock protein DnaJ - - - 0.0000000000000000000000000000000000000000000000002679 184.0
CMS3_k127_6542795_3 WLM domain K07043 - - 0.000000000000000000000000000000000000000000005286 172.0
CMS3_k127_6542795_4 - - - - 0.00000000000000000000005998 102.0
CMS3_k127_6542795_5 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00006046 46.0
CMS3_k127_6544347_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 334.0
CMS3_k127_6544347_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 290.0
CMS3_k127_6544347_2 PFAM Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001896 291.0
CMS3_k127_6544347_3 - - - - 0.0000000000000000000000000000000000000000000000001693 180.0
CMS3_k127_6544347_4 Transposase - - - 0.00000006323 55.0
CMS3_k127_65489_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007495 260.0
CMS3_k127_65489_2 Belongs to the UPF0337 (CsbD) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000004064 117.0
CMS3_k127_65489_3 BON domain - - - 0.00000000000003423 73.0
CMS3_k127_6567174_0 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002418 267.0
CMS3_k127_6567174_1 Sel1 repeat protein K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001661 275.0
CMS3_k127_6567174_2 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000001418 218.0
CMS3_k127_6567174_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000001093 207.0
CMS3_k127_6567174_4 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.000000000000000000000000000000000000000000000000000001138 207.0
CMS3_k127_6567174_5 Glutaredoxin - - - 0.0000000000000000000000000001474 116.0
CMS3_k127_6567174_6 - - - - 0.00000000000000000002164 95.0
CMS3_k127_6567174_7 long-chain fatty acid transporting porin activity K07267 - - 0.000000000000000008716 96.0
CMS3_k127_6578008_0 ApbE family K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 345.0
CMS3_k127_6578008_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 321.0
CMS3_k127_6581020_0 TonB dependent receptor - - - 1.369e-241 773.0
CMS3_k127_6581020_1 Tryptophan halogenase K14266 - 1.14.19.9 0.00000000000000000000000000000000000000000004495 164.0
CMS3_k127_6581020_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000005813 115.0
CMS3_k127_6581020_3 COG1609 Transcriptional regulators K02529,K03484 - - 0.0000000000000000008654 88.0
CMS3_k127_6581020_4 COG1609 Transcriptional regulators K02529,K03484 - - 0.0000003943 54.0
CMS3_k127_6593925_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.761e-320 990.0
CMS3_k127_6593925_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.483e-250 774.0
CMS3_k127_6593925_10 RNA-binding protein K07574 - - 0.0000000000000000000000000005844 115.0
CMS3_k127_6593925_11 Domain of unknown function (DUF4149) - - - 0.000000000000000000000000004366 117.0
CMS3_k127_6593925_12 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000007205 116.0
CMS3_k127_6593925_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 595.0
CMS3_k127_6593925_3 NADH-quinone oxidoreductase subunit F K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 441.0
CMS3_k127_6593925_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 329.0
CMS3_k127_6593925_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 324.0
CMS3_k127_6593925_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0042364,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 309.0
CMS3_k127_6593925_7 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004599 275.0
CMS3_k127_6593925_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000256 268.0
CMS3_k127_6593925_9 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000002264 227.0
CMS3_k127_6605035_0 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000001785 204.0
CMS3_k127_6605035_1 - - - - 0.0000000001573 74.0
CMS3_k127_6612879_0 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 586.0
CMS3_k127_6612879_1 MATE efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 411.0
CMS3_k127_6625085_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 4.967e-196 620.0
CMS3_k127_6625085_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 481.0
CMS3_k127_6625085_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000003288 189.0
CMS3_k127_6625085_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.00000000000000000000000000000000000000000000000001942 182.0
CMS3_k127_6625085_4 Hydrolase of alkaline phosphatase superfamily - - - 0.00000000000001319 81.0
CMS3_k127_6647338_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1339.0
CMS3_k127_6647338_1 Belongs to the ParA family K03609 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0007059,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051301,GO:0051302,GO:0051782,GO:0060187,GO:0065007,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 420.0
CMS3_k127_6647338_2 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 405.0
CMS3_k127_6647338_3 CcmB protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 383.0
CMS3_k127_6647338_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004135 274.0
CMS3_k127_6647338_5 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000242 183.0
CMS3_k127_6647338_6 Gliding motility protein GldG - - - 0.000000000000000000000000000000000000000006428 157.0
CMS3_k127_6647338_7 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000002872 102.0
CMS3_k127_6647338_8 Lysin motif K08307 - - 0.000001204 51.0
CMS3_k127_6656427_0 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 442.0
CMS3_k127_6672219_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 454.0
CMS3_k127_6672219_1 Phage tail sheath C-terminal domain K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 441.0
CMS3_k127_6672219_2 T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000912 286.0
CMS3_k127_6672219_3 Protein of unknown function (DUF4255) - - - 0.000000000000000000000000000000000000000004438 169.0
CMS3_k127_6672219_4 - - - - 0.00000000000000000000000000000000000000001034 164.0
CMS3_k127_6672219_5 - - - - 0.000000000000000000000000013 113.0
CMS3_k127_6704315_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.197e-203 647.0
CMS3_k127_6704315_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 447.0
CMS3_k127_6704315_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009425 251.0
CMS3_k127_6704315_3 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000002455 198.0
CMS3_k127_6704315_4 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000001265 156.0
CMS3_k127_6710641_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 3.542e-267 827.0
CMS3_k127_6710641_1 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 504.0
CMS3_k127_6710641_10 Multicopper oxidase - - - 0.00007464 56.0
CMS3_k127_6710641_11 Domain of unknown function (DUF4402) - - - 0.0002373 50.0
CMS3_k127_6710641_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000525 246.0
CMS3_k127_6710641_3 COG3121 P pilus assembly protein, chaperone PapD - - - 0.0000000000000000000000000000000000000000000000000000000004618 212.0
CMS3_k127_6710641_4 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000001373 143.0
CMS3_k127_6710641_5 Multicopper oxidase - - - 0.0000000000000000000000000002328 128.0
CMS3_k127_6710641_6 - - - - 0.00000000000000000118 87.0
CMS3_k127_6710641_7 SPW repeat - - - 0.00000000000000003513 88.0
CMS3_k127_6710641_8 Domain of unknown function (DUF4402) - - - 0.00000000000000009679 86.0
CMS3_k127_6719837_0 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 569.0
CMS3_k127_6719837_1 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001168 249.0
CMS3_k127_6719837_2 Protein of unknown function (DUF2288) - - - 0.00000000000000000007532 93.0
CMS3_k127_6725777_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 1.386e-235 736.0
CMS3_k127_6725777_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 527.0
CMS3_k127_6725777_2 Binding-protein-dependent transport system inner membrane component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 420.0
CMS3_k127_6725777_3 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 421.0
CMS3_k127_6725777_4 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000000000000003653 242.0
CMS3_k127_6725777_5 Protein of unknown function (DUF1348) K09958 - - 0.00000000000000000000000000000000000000000000000000000000000000002587 226.0
CMS3_k127_6725777_6 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.0000000000000000000000000000000000000000000000000000000000000008623 221.0
CMS3_k127_6725777_7 cobalt transporter, subunit CbtA - - - 0.00000000000000000000000000000000000000000000000000000000002687 213.0
CMS3_k127_6725777_8 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000002227 210.0
CMS3_k127_6725777_9 cobalt transporter - - - 0.000007835 51.0
CMS3_k127_67458_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001543 288.0
CMS3_k127_67458_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003753 239.0
CMS3_k127_67458_2 Transposase K07483 - - 0.0000003597 53.0
CMS3_k127_6748824_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 2416.0
CMS3_k127_6748824_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 514.0
CMS3_k127_6748824_2 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 376.0
CMS3_k127_6748824_3 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 359.0
CMS3_k127_6748824_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000002257 150.0
CMS3_k127_6763176_0 Type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 580.0
CMS3_k127_6763176_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 451.0
CMS3_k127_6763176_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 381.0
CMS3_k127_6763176_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 315.0
CMS3_k127_6763176_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000002779 228.0
CMS3_k127_6763176_5 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 - 0.0000000000000000000000000000000000000000000000000000000000002368 221.0
CMS3_k127_6763176_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000003248 186.0
CMS3_k127_6763176_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000005645 97.0
CMS3_k127_6763176_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - 0.00000000000000000008151 90.0
CMS3_k127_6775379_0 Extracellular solute-binding protein - - - 1.24e-322 1002.0
CMS3_k127_6775379_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 477.0
CMS3_k127_6775379_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 402.0
CMS3_k127_6775379_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 311.0
CMS3_k127_6793779_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.372e-227 713.0
CMS3_k127_6793779_1 TIGRFAM amidase, hydantoinase carbamoylase K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 546.0
CMS3_k127_6793779_2 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 364.0
CMS3_k127_6793779_3 Isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 330.0
CMS3_k127_6793779_4 - - - - 0.00000000000000000000000000006284 122.0
CMS3_k127_6794903_0 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 436.0
CMS3_k127_6794903_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 412.0
CMS3_k127_6794903_2 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000002723 232.0
CMS3_k127_6794903_3 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000003721 207.0
CMS3_k127_6794903_4 membrane organization K20543 - - 0.00000000000000000000000000000000000000000000000000000003113 214.0
CMS3_k127_6794903_5 TRAM domain K03215 - 2.1.1.190 0.0000000000000000000000000000000000000003533 164.0
CMS3_k127_6794903_6 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000001024 127.0
CMS3_k127_6794903_7 protein conserved in bacteria K09954 - - 0.00000000000002056 76.0
CMS3_k127_6794903_8 Diguanylate cyclase - - - 0.00000000005406 69.0
CMS3_k127_6809228_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009123 527.0
CMS3_k127_6809228_1 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 442.0
CMS3_k127_6809228_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000002477 219.0
CMS3_k127_6809228_3 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.000000000000000000000000000000000000000001761 163.0
CMS3_k127_6810042_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 511.0
CMS3_k127_6810042_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000134 250.0
CMS3_k127_6810042_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001065 236.0
CMS3_k127_6810042_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000112 214.0
CMS3_k127_6810042_4 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 0.00000000000000000000000000000000000000000000000000001694 194.0
CMS3_k127_6810042_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000006358 189.0
CMS3_k127_6810042_6 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000004765 161.0
CMS3_k127_6810042_7 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000006856 89.0
CMS3_k127_6831737_0 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 480.0
CMS3_k127_6831737_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 407.0
CMS3_k127_6831737_2 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005867 245.0
CMS3_k127_6831737_3 MerR HTH family regulatory protein K18997 - - 0.00000000000000000000000000004869 119.0
CMS3_k127_6831737_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000003227 119.0
CMS3_k127_6831737_5 Tetratricopeptide repeat - - - 0.0000000000000000000003479 108.0
CMS3_k127_6831737_6 Pfam Response regulator receiver - - - 0.0000000000000000001758 104.0
CMS3_k127_6831737_7 DsrC like protein K11179 - - 0.0000000000000183 78.0
CMS3_k127_6841044_0 Flavoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 293.0
CMS3_k127_6841044_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001878 241.0
CMS3_k127_6841044_2 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000414 183.0
CMS3_k127_6841044_3 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000008927 177.0
CMS3_k127_6841044_4 - - - - 0.000000000000000007603 85.0
CMS3_k127_68493_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0 1323.0
CMS3_k127_68493_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 578.0
CMS3_k127_68493_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 558.0
CMS3_k127_68493_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009608 378.0
CMS3_k127_68493_4 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 287.0
CMS3_k127_68493_5 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000006251 149.0
CMS3_k127_685816_0 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 410.0
CMS3_k127_685816_1 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000001598 145.0
CMS3_k127_685816_2 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000002276 100.0
CMS3_k127_685816_4 Competence protein - - - 0.0000000000000001878 80.0
CMS3_k127_6861135_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.101e-215 677.0
CMS3_k127_6861135_2 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000001439 162.0
CMS3_k127_6909372_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.105e-205 645.0
CMS3_k127_6909372_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001044 273.0
CMS3_k127_6909372_2 PFAM Glutathione S-transferase K03599 GO:0001000,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0008150,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0042594,GO:0043175,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070063,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002371 264.0
CMS3_k127_6909372_3 PFAM Cytochrome C1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009762 264.0
CMS3_k127_6909372_4 phosphatase homologous to the C-terminal domain of histone macroH2A1 - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.000000000000000000000000000000000000000000000000000000000000002937 220.0
CMS3_k127_6909372_5 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000002173 155.0
CMS3_k127_6909372_6 Rhomboid family - - - 0.00000000000001168 78.0
CMS3_k127_6909377_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1011.0
CMS3_k127_6909377_1 Belongs to the N-Me-Phe pilin family K02650,K02655,K02682 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.000000000000000000005952 98.0
CMS3_k127_6909377_2 - - - - 0.000000001246 66.0
CMS3_k127_6916536_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 1.269e-222 693.0
CMS3_k127_6916536_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 492.0
CMS3_k127_6916536_2 Domain of unknown function (DUF4279) - - - 0.00000000000000000000000000000000000000000000000000000000000000007782 224.0
CMS3_k127_6916536_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.00000000000000000000001477 101.0
CMS3_k127_6916536_4 Subtilase family - - - 0.00000000000000000005723 103.0
CMS3_k127_6918520_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.476e-225 716.0
CMS3_k127_6918520_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000001506 145.0
CMS3_k127_6918520_2 - - - - 0.00000000000000000000000000000000007499 142.0
CMS3_k127_6918520_3 - - - - 0.00000000000001635 82.0
CMS3_k127_6918520_4 - - - - 0.000004853 51.0
CMS3_k127_6936837_0 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002611 256.0
CMS3_k127_6936837_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000001687 202.0
CMS3_k127_6936837_2 - - - - 0.0000000000000000000000000000000000000004457 155.0
CMS3_k127_6936837_3 long-chain fatty acid transporting porin activity K07267 - - 0.000000000003534 78.0
CMS3_k127_6937284_0 DNA packaging protein gp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036 366.0
CMS3_k127_6937284_1 Type III restriction enzyme, res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 333.0
CMS3_k127_6937284_10 - - - - 0.000000000000000000001341 107.0
CMS3_k127_6937284_11 VRR_NUC - - - 0.000000000000000003638 89.0
CMS3_k127_6937284_12 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000000000000001978 90.0
CMS3_k127_6937284_13 Single-stranded DNA-binding protein K03111 - - 0.0000000000000001644 84.0
CMS3_k127_6937284_14 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000002019 91.0
CMS3_k127_6937284_15 FG-GAP repeat - - - 0.000000000000001591 89.0
CMS3_k127_6937284_16 - - - - 0.000000000000008372 81.0
CMS3_k127_6937284_17 - - - - 0.00000000000001397 86.0
CMS3_k127_6937284_18 ERF superfamily - - - 0.0000000000000552 80.0
CMS3_k127_6937284_2 Domain of unknown function (DUF932) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000409 282.0
CMS3_k127_6937284_20 Sulfotransferase family - - - 0.0000000000826 70.0
CMS3_k127_6937284_22 Terminase small subunit - - - 0.000000004029 64.0
CMS3_k127_6937284_23 Protein of unknown function (DUF1364) - - - 0.000000006635 61.0
CMS3_k127_6937284_25 - - - - 0.000005234 54.0
CMS3_k127_6937284_27 Chaperone of endosialidase - - - 0.0001548 53.0
CMS3_k127_6937284_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000751 204.0
CMS3_k127_6937284_4 YqaJ-like viral recombinase domain - - - 0.0000000000000000000000000000000000000000001806 166.0
CMS3_k127_6937284_5 - - - - 0.0000000000000000000000000000000000000004614 154.0
CMS3_k127_6937284_6 - - - - 0.00000000000000000000000000000000000002878 153.0
CMS3_k127_6937284_7 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000006681 135.0
CMS3_k127_693924_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 487.0
CMS3_k127_693924_1 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 372.0
CMS3_k127_693924_2 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000009336 229.0
CMS3_k127_6959782_0 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 400.0
CMS3_k127_6959782_2 - - - - 0.00000000000000000005184 94.0
CMS3_k127_6981690_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 556.0
CMS3_k127_6981690_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 411.0
CMS3_k127_6981690_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000025 118.0
CMS3_k127_6981690_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000000000005702 99.0
CMS3_k127_6981690_4 In Escherichia coli transcription of this gene is enhanced by polyamines K02914 - - 0.000000000000001444 77.0
CMS3_k127_6983754_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 512.0
CMS3_k127_6984667_0 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 349.0
CMS3_k127_6984667_1 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000001438 153.0
CMS3_k127_6984667_2 Cytochrome c - - - 0.0000000000000000000000001107 111.0
CMS3_k127_6984667_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000003092 62.0
CMS3_k127_7016215_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 521.0
CMS3_k127_7016215_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001602 258.0
CMS3_k127_7016215_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006466 242.0
CMS3_k127_7016215_3 DJ-1/PfpI family K03152 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009100,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019538,GO:0022613,GO:0030091,GO:0033554,GO:0034599,GO:0036211,GO:0036524,GO:0036525,GO:0042026,GO:0042221,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000008296 229.0
CMS3_k127_7023828_0 Pirin C-terminal cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 387.0
CMS3_k127_7023828_1 Transcriptional regulator, LysR K10918,K18900 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 374.0
CMS3_k127_7023828_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000003346 212.0
CMS3_k127_7023828_3 PFAM Forkhead-associated protein - - - 0.00000000002138 69.0
CMS3_k127_7027752_0 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 473.0
CMS3_k127_7027752_1 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000002639 238.0
CMS3_k127_7027752_2 - - - - 0.0000000000000000000000000000000000000000009404 164.0
CMS3_k127_7027752_3 epimerase, PhzC PhzF homolog - - - 0.0000000000000000001066 89.0
CMS3_k127_7027752_4 SNARE associated Golgi protein - - - 0.0000000000006277 76.0
CMS3_k127_7064573_0 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001349 244.0
CMS3_k127_7064573_1 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000002021 187.0
CMS3_k127_7064573_2 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000005666 125.0
CMS3_k127_7064573_3 Diguanylate cyclase with PAS PAC sensor - - - 0.00008835 48.0
CMS3_k127_7081018_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 606.0
CMS3_k127_7081018_1 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000007164 142.0
CMS3_k127_7081018_2 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000002154 146.0
CMS3_k127_7083324_0 Type IV Pilus-assembly protein W K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000002483 242.0
CMS3_k127_7083324_1 Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 - - 0.000000000000000000000000000000000003559 153.0
CMS3_k127_7083324_2 Prokaryotic N-terminal methylation motif K02671 - - 0.00000000000000000000000000000000006745 139.0
CMS3_k127_7083324_3 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000002482 129.0
CMS3_k127_7083324_4 Pilus assembly protein PilX K02673 - - 0.000000000000000005689 91.0
CMS3_k127_7087473_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.65e-236 767.0
CMS3_k127_7087473_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 363.0
CMS3_k127_7087473_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000009031 259.0
CMS3_k127_7087473_3 low molecular weight K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000005329 209.0
CMS3_k127_7087473_4 subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000006021 211.0
CMS3_k127_7087473_5 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000008353 101.0
CMS3_k127_7087473_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000002882 89.0
CMS3_k127_7087473_7 Peptidase family S49 K04773 - - 0.0000000548 59.0
CMS3_k127_7108894_0 ImcF-related N-terminal domain K11891 - - 8.636e-244 794.0
CMS3_k127_7108894_1 protein conserved in bacteria K11893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 480.0
CMS3_k127_7108894_2 Type VI secretion system protein DotU K11892 - - 0.0000000000000000000000000000000000000000000000000000000000001355 222.0
CMS3_k127_7108894_3 Uncharacterized protein conserved in bacteria (DUF2094) K11890 - - 0.00000000000000000000000000000000000000000000000000000000121 210.0
CMS3_k127_7108894_4 protein conserved in bacteria K11906 - - 0.0004742 44.0
CMS3_k127_7110526_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000005743 210.0
CMS3_k127_7110526_1 Peptidase family M48 - - - 0.0000000000000000008163 102.0
CMS3_k127_7135927_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.757e-209 658.0
CMS3_k127_7135927_1 Diaminopimelate epimerase K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 356.0
CMS3_k127_7135927_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 324.0
CMS3_k127_7135927_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
CMS3_k127_7135927_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000004824 220.0
CMS3_k127_7135927_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000001797 208.0
CMS3_k127_7135927_6 protein conserved in bacteria K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000001353 194.0
CMS3_k127_7135927_7 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000001994 173.0
CMS3_k127_7141356_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 376.0
CMS3_k127_7141356_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000002031 194.0
CMS3_k127_7141356_2 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000008403 151.0
CMS3_k127_7141872_0 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 373.0
CMS3_k127_7141872_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484,K02660,K07653,K07654,K11617 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005515,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0035556,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046983,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070297,GO:0070298,GO:0071704,GO:0140096,GO:1901564,GO:1902531,GO:1902532 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 321.0
CMS3_k127_7141872_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 294.0
CMS3_k127_7141872_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000009482 252.0
CMS3_k127_7141872_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000005012 137.0
CMS3_k127_7141872_5 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000005384 120.0
CMS3_k127_7141872_6 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000863 105.0
CMS3_k127_7142736_0 COG0330 Membrane protease subunits, stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 441.0
CMS3_k127_7142736_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 423.0
CMS3_k127_7142736_2 Peptidase family M3 K01414 - 3.4.24.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 342.0
CMS3_k127_7142736_3 NfeD-like C-terminal, partner-binding K07340 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000004218 133.0
CMS3_k127_7157582_0 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 1.223e-243 764.0
CMS3_k127_7157582_1 Belongs to the DegT DnrJ EryC1 family K13017 - 2.6.1.98 0.000000000000000000000000000000000000000000002295 168.0
CMS3_k127_7157582_2 Type II secretion system K02653 - - 0.00000000000000000000000000000000000000000001374 164.0
CMS3_k127_7186818_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 372.0
CMS3_k127_7186818_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001472 286.0
CMS3_k127_7186818_2 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000003113 207.0
CMS3_k127_7186818_3 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.00000000001201 67.0
CMS3_k127_7186882_0 transferase activity, transferring glycosyl groups - - - 2.042e-203 645.0
CMS3_k127_7186882_1 NAD-dependent K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 524.0
CMS3_k127_7186882_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000002265 223.0
CMS3_k127_7186882_3 epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000002407 184.0
CMS3_k127_7186882_4 Capsule polysaccharide biosynthesis protein - - - 0.0000000000000000000000002772 111.0
CMS3_k127_7188908_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 613.0
CMS3_k127_7188908_1 metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 413.0
CMS3_k127_7188908_2 Sigma-70, region 4 K03088 - - 0.000000000000000001097 92.0
CMS3_k127_7271538_0 membrane organization K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 488.0
CMS3_k127_7271538_1 - - - - 0.0000001207 61.0
CMS3_k127_7275077_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 291.0
CMS3_k127_7275077_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000003415 249.0
CMS3_k127_7275077_2 Domain of unknown function (DUF4845) - - - 0.0000000000004547 74.0
CMS3_k127_730520_0 Molybdopterin oxidoreductase Fe4S4 domain K02567 - - 0.0 1378.0
CMS3_k127_730520_1 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 585.0
CMS3_k127_730520_2 Uncharacterized conserved protein (DUF2075) - - - 0.00000000000000000000000000000000000000000000000001508 186.0
CMS3_k127_730520_3 PEP-CTERM motif - - - 0.000000000000000000000000000001999 128.0
CMS3_k127_730520_4 Nitrate reductase cytochrome c-type subunit (NapB) K02568 - - 0.0000000000000000000000000003827 120.0
CMS3_k127_730520_5 NapD protein K02570 - - 0.00000000004079 67.0
CMS3_k127_730520_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0003984 54.0
CMS3_k127_7313307_0 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000001688 213.0
CMS3_k127_7313307_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000002614 218.0
CMS3_k127_7313307_2 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000001407 188.0
CMS3_k127_7313307_3 COG0811 Biopolymer transport proteins K03561 - - 0.000000000000000000000000000000000000000000000002644 179.0
CMS3_k127_7313307_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000004714 138.0
CMS3_k127_7313307_5 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000001057 96.0
CMS3_k127_7313307_6 - - - - 0.0001577 50.0
CMS3_k127_7323313_0 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006353 269.0
CMS3_k127_7323313_1 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000003218 138.0
CMS3_k127_7323313_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000009617 127.0
CMS3_k127_7323313_3 Thioredoxin-like - - - 0.000000000000000000000002193 109.0
CMS3_k127_7323313_4 cytochrome c biogenesis protein K07399 - - 0.00000000000005972 77.0
CMS3_k127_733285_0 Reduces the stability of FtsZ polymers in the presence of ATP K06916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 312.0
CMS3_k127_733285_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000001123 201.0
CMS3_k127_733285_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000002464 194.0
CMS3_k127_733285_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.00000000000000000000000000000000000000000000000005928 182.0
CMS3_k127_733285_4 Formyl transferase K00604,K11175 - 2.1.2.2,2.1.2.9 0.0000000000000000000000000000000000000000004557 169.0
CMS3_k127_733285_5 - - - - 0.0000000000000000000000000000000000000002351 157.0
CMS3_k127_7351579_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.458e-253 807.0
CMS3_k127_7351579_1 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000001549 241.0
CMS3_k127_7351579_2 nitric oxide dioxygenase activity - - - 0.000000000000000003495 89.0
CMS3_k127_7351579_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000007396 86.0
CMS3_k127_7355460_0 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 434.0
CMS3_k127_7355460_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000009749 248.0
CMS3_k127_7355460_3 Sel1-like repeats. K07126 - - 0.00000000000005109 78.0
CMS3_k127_7373640_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1672.0
CMS3_k127_7373640_1 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 331.0
CMS3_k127_7373640_2 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001113 222.0
CMS3_k127_7373640_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.00000000000000000000002057 100.0
CMS3_k127_7373640_4 Rhodanese Homology Domain - - - 0.00000000000384 72.0
CMS3_k127_7377815_0 Type II secretory pathway, component ExeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001131 269.0
CMS3_k127_7377815_1 Protein conserved in bacteria K09954 - - 0.00000000000000000000000009439 108.0
CMS3_k127_7377815_2 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000002515 76.0
CMS3_k127_7377815_3 - - - - 0.000004039 59.0
CMS3_k127_7387410_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 478.0
CMS3_k127_7387410_1 COG0810 Periplasmic protein TonB links inner and outer membranes K03646 - - 0.00007727 54.0
CMS3_k127_7434331_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 310.0
CMS3_k127_7434331_1 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000004347 246.0
CMS3_k127_7435961_0 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001116 285.0
CMS3_k127_7435961_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000045 268.0
CMS3_k127_7435961_2 PFAM ATP-binding region, ATPase-like histidine kinase A-like - - - 0.0000000000000000000000000000000000000000000000000000000000000002509 242.0
CMS3_k127_7435961_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000414 170.0
CMS3_k127_7437008_0 kinase domain - - - 1.254e-214 680.0
CMS3_k127_7437008_1 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 335.0
CMS3_k127_7437008_2 - - - - 0.000000000000000000000006865 105.0
CMS3_k127_7437008_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000001008 96.0
CMS3_k127_7438756_0 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002787 259.0
CMS3_k127_7438756_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000938 255.0
CMS3_k127_7444308_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 415.0
CMS3_k127_7444308_1 Phosphorylase superfamily K00757,K01241 - 2.4.2.3,3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000321 213.0
CMS3_k127_7444308_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000001398 197.0
CMS3_k127_746838_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1152.0
CMS3_k127_746838_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 1.664e-197 638.0
CMS3_k127_746838_2 Metallo-beta-lactamase superfamily K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 415.0
CMS3_k127_746838_3 COG2897 Rhodanese-related sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 294.0
CMS3_k127_746838_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000009665 207.0
CMS3_k127_746838_5 Oxidoreductase FAD-binding domain protein - - - 0.000000000000000000000000000000000005574 146.0
CMS3_k127_7474105_0 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000001359 219.0
CMS3_k127_7474105_1 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000000000000001601 123.0
CMS3_k127_7474105_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000003239 122.0
CMS3_k127_7496225_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 494.0
CMS3_k127_7496225_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 305.0
CMS3_k127_7496225_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000001063 188.0
CMS3_k127_7496225_3 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.00000000000000000000000000000000000000000001115 169.0
CMS3_k127_7496225_4 PFAM porin Gram-negative type - - - 0.0000000000000000000000000000000000000000000157 175.0
CMS3_k127_7496225_5 NlpC/P60 family K13694,K13695 - 3.4.17.13 0.0000000000000000000000000000000000000001058 156.0
CMS3_k127_7531665_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 403.0
CMS3_k127_7531665_1 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000001496 119.0
CMS3_k127_7531665_2 - - - - 0.00000000000000002135 83.0
CMS3_k127_7531665_3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000007121 82.0
CMS3_k127_7622582_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 9.535e-247 784.0
CMS3_k127_7622582_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 303.0
CMS3_k127_7622582_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000001193 208.0
CMS3_k127_7622582_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000001499 192.0
CMS3_k127_779779_0 lysine 2,3-aminomutase K19810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 364.0
CMS3_k127_779779_1 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 308.0
CMS3_k127_779779_2 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) K04568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016746,GO:0016755,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052868,GO:0071704,GO:0071915,GO:0072580,GO:0072581,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000001829 226.0
CMS3_k127_779779_3 - - - - 0.00000000000000000000000000000000004824 149.0
CMS3_k127_85502_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 500.0
CMS3_k127_85502_1 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000000000000000000000000003701 170.0
CMS3_k127_85502_2 OmpA family K02557 - - 0.0000000000000000000000000000000000009704 152.0
CMS3_k127_877418_0 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 344.0
CMS3_k127_877418_1 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000004228 236.0
CMS3_k127_877418_2 COQ9 - - - 0.00000000000000000000000000000000000000000001342 170.0
CMS3_k127_877418_3 part of a sulfur-relay system K11179 - - 0.0000000000000000005903 91.0
CMS3_k127_877418_5 Sulfate transporter K03321 - - 0.000001693 61.0
CMS3_k127_906527_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.667e-275 855.0
CMS3_k127_906527_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 345.0
CMS3_k127_906527_2 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
CMS3_k127_906527_3 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
CMS3_k127_906527_4 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000000000003989 224.0
CMS3_k127_906527_5 Cyclic nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000699 179.0
CMS3_k127_906527_6 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 0.00000000000000000000000000000000000000001113 160.0
CMS3_k127_906527_7 response to heat K07090 - - 0.00000000000000000000000000000000000000004722 161.0
CMS3_k127_906527_8 PFAM RNA-binding S4 domain protein K04762 - - 0.00000000000000000000000000002226 122.0
CMS3_k127_906527_9 COG2863 Cytochrome c553 - - - 0.0000001066 53.0
CMS3_k127_940359_0 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 6.14e-270 845.0
CMS3_k127_940359_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 336.0
CMS3_k127_940359_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 289.0
CMS3_k127_940359_3 Citrate synthase, C-terminal domain K01659 - 2.3.3.5 0.00000000000000000000003309 100.0
CMS3_k127_940359_4 HMGL-like K01640 - 4.1.3.4 0.0000000000006092 69.0
CMS3_k127_958942_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 6.538e-233 731.0
CMS3_k127_958942_1 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000004809 250.0
CMS3_k127_958942_2 regulatory protein, arsR - - - 0.00000000000000000000000000005081 117.0
CMS3_k127_958942_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000025 105.0
CMS3_k127_959000_0 Sucrose phosphate synthase, sucrose phosphatase-like K13058 GO:0003674,GO:0003824,GO:0005975,GO:0005984,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0034637,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0071704,GO:1901576 2.4.1.246 0.0 1104.0
CMS3_k127_959000_1 glycosyl transferase group 1 K00696 - 2.4.1.14 8.675e-264 828.0
CMS3_k127_959000_2 PFAM Binding-protein-dependent transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 388.0
CMS3_k127_959000_3 PfkB domain protein K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 295.0
CMS3_k127_959000_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000008326 203.0
CMS3_k127_96252_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 290.0
CMS3_k127_96252_3 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000005642 219.0
CMS3_k127_96252_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000029 205.0
CMS3_k127_96252_5 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000001348 204.0
CMS3_k127_96252_6 - - - - 0.0000000000000000000000000000000000000000000000000000001369 207.0
CMS3_k127_96252_7 PFAM ApaG domain protein K06195 - - 0.000000000000000000000000000000000000000000000000000001188 194.0
CMS3_k127_96252_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000498 187.0
CMS3_k127_982811_0 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007785 546.0
CMS3_k127_982811_1 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 341.0
CMS3_k127_982811_2 PFAM 20S proteasome, A and B subunits K07395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 292.0
CMS3_k127_98418_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 556.0
CMS3_k127_98418_1 PFAM Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000006495 208.0
CMS3_k127_98418_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000005645 97.0
CMS3_k127_98418_3 L,D-transpeptidase catalytic domain - - - 0.000001145 51.0
CMS3_k127_992490_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 539.0
CMS3_k127_992490_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 457.0
CMS3_k127_992490_2 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000008861 237.0
CMS3_k127_992490_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000005572 196.0
CMS3_k127_992490_4 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000000002011 156.0
CMS3_k127_992490_5 lysine methyltransferase K07117 - - 0.0000000000000000000000000001316 117.0
CMS3_k127_992490_6 Putative zinc-finger - - - 0.00000000000007101 74.0
CMS3_k127_995344_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 398.0
CMS3_k127_995344_1 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 301.0
CMS3_k127_996346_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 9.883e-293 915.0
CMS3_k127_996346_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 314.0
CMS3_k127_996346_2 stress-induced protein - GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009022,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000937 270.0
CMS3_k127_996346_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000002875 252.0
CMS3_k127_996346_4 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003681 257.0
CMS3_k127_996346_5 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000001361 202.0
CMS3_k127_996346_6 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000002396 208.0
CMS3_k127_996346_7 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.0000000000000000000000004558 110.0
CMS3_k127_996346_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000008377 106.0