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Overview

ID MAG00681
Name DPH1_bin.28
Sample SMP0019
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Nitrosomonadaceae
Genus Nitrosomonas
Species
Assembly information
Completeness (%) 83.41
Contamination (%) 1.14
GC content (%) 45.0
N50 (bp) 14,113
Genome size (bp) 2,228,672

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2212

Gene name Description KEGG GOs EC E-value Score Sequence
DPH1_k127_10035037_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1520.0
DPH1_k127_10035037_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.612e-272 839.0
DPH1_k127_10035037_10 CDP-archaeol synthase K19664 - 2.7.7.67 0.00002848 47.0
DPH1_k127_10035037_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 5.889e-246 763.0
DPH1_k127_10035037_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 9.309e-246 760.0
DPH1_k127_10035037_4 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 520.0
DPH1_k127_10035037_5 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 480.0
DPH1_k127_10035037_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 416.0
DPH1_k127_10035037_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 337.0
DPH1_k127_10035037_8 Domain of unknown function (DUF4372) - - - 0.0000000000000000000000000000001465 124.0
DPH1_k127_10035037_9 - - - - 0.000007581 49.0
DPH1_k127_10080623_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 7.724e-300 922.0
DPH1_k127_10080623_1 Transposase, IS605 OrfB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 511.0
DPH1_k127_10080623_2 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 477.0
DPH1_k127_10080623_3 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 310.0
DPH1_k127_10080623_4 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 287.0
DPH1_k127_10080623_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000009688 260.0
DPH1_k127_10080623_6 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000006326 128.0
DPH1_k127_10080623_7 GDP-mannose mannosyl hydrolase activity K01515,K03574,K12944 - 3.6.1.13,3.6.1.55 0.0000000000000000000000009959 113.0
DPH1_k127_10080623_8 serine-type aminopeptidase activity - - - 0.00000000001892 72.0
DPH1_k127_10129274_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 2438.0
DPH1_k127_10129274_1 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 355.0
DPH1_k127_10129274_2 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 310.0
DPH1_k127_10129274_3 PFAM transport-associated K04065 - - 0.000000000000000000000000000000000000000000000000009286 181.0
DPH1_k127_10129274_4 - - - - 0.00000000000000000000000000000000000000000002287 165.0
DPH1_k127_10129274_5 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000001099 153.0
DPH1_k127_10129274_6 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000001501 79.0
DPH1_k127_10147668_0 Protein of unknown function DUF262 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 503.0
DPH1_k127_10147668_1 Thioredoxin K07396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 404.0
DPH1_k127_10152948_0 OsmC-like protein K06889,K07397 - - 9.163e-243 752.0
DPH1_k127_10152948_1 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 516.0
DPH1_k127_10152948_2 PFAM RNA-binding S4 K04762 - - 0.000000000000000000000000000000000000000000000000000000000000000000006187 235.0
DPH1_k127_10208417_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1741.0
DPH1_k127_10208417_1 Biotin-lipoyl like K01993,K16922 - - 0.0 1480.0
DPH1_k127_10208417_10 Belongs to the sulfur carrier protein TusA family - - - 1.867e-236 734.0
DPH1_k127_10208417_11 Acyl-CoA dehydrogenase, C-terminal domain - - - 6.947e-222 691.0
DPH1_k127_10208417_12 Belongs to the GcvT family K06980 - - 2.23e-212 662.0
DPH1_k127_10208417_13 Sulfotransferase family - - - 1.899e-201 627.0
DPH1_k127_10208417_14 cysteine protease - - - 8.565e-196 613.0
DPH1_k127_10208417_15 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 6.796e-194 606.0
DPH1_k127_10208417_16 Uncharacterized conserved protein (DUF2278) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 597.0
DPH1_k127_10208417_17 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 578.0
DPH1_k127_10208417_18 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 571.0
DPH1_k127_10208417_19 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 554.0
DPH1_k127_10208417_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1446.0
DPH1_k127_10208417_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
DPH1_k127_10208417_21 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 484.0
DPH1_k127_10208417_22 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 460.0
DPH1_k127_10208417_23 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 361.0
DPH1_k127_10208417_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 318.0
DPH1_k127_10208417_25 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 297.0
DPH1_k127_10208417_26 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 292.0
DPH1_k127_10208417_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 263.0
DPH1_k127_10208417_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006365 258.0
DPH1_k127_10208417_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 259.0
DPH1_k127_10208417_3 UvrD REP K03657 - 3.6.4.12 0.0 1390.0
DPH1_k127_10208417_30 - K19168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004301 256.0
DPH1_k127_10208417_31 Protein of unknown function (DUF2782) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
DPH1_k127_10208417_32 - - - - 0.00000000000000000000000000000000000000000000000000000000000003404 216.0
DPH1_k127_10208417_33 - - - - 0.0000000000000000000000000000000000000000000000000000000004586 203.0
DPH1_k127_10208417_35 - - - - 0.000000000000000000002719 93.0
DPH1_k127_10208417_36 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.000000005114 58.0
DPH1_k127_10208417_37 ABC-2 family transporter protein - - - 0.0000007159 52.0
DPH1_k127_10208417_4 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0 1311.0
DPH1_k127_10208417_5 Dynamin family - - - 3.55e-305 937.0
DPH1_k127_10208417_6 Outer membrane efflux protein K18139 - - 8.261e-288 886.0
DPH1_k127_10208417_7 Bacterial protein of unknown function (DUF839) K07093 - - 1.244e-262 813.0
DPH1_k127_10208417_8 amine dehydrogenase activity - - - 6.327e-250 792.0
DPH1_k127_10208417_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 4.19e-237 733.0
DPH1_k127_10238002_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1767.0
DPH1_k127_10238002_1 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1402.0
DPH1_k127_10238002_10 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 548.0
DPH1_k127_10238002_11 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 524.0
DPH1_k127_10238002_12 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 485.0
DPH1_k127_10238002_13 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 339.0
DPH1_k127_10238002_14 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000008006 230.0
DPH1_k127_10238002_15 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000007488 177.0
DPH1_k127_10238002_16 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000007861 149.0
DPH1_k127_10238002_2 PFAM Peptidase M16 K07263 - - 8.483e-258 797.0
DPH1_k127_10238002_3 HDOD domain - - - 5.409e-249 771.0
DPH1_k127_10238002_4 Type II secretion system K02653 - - 1.03e-245 761.0
DPH1_k127_10238002_5 type II secretion system protein E K02670 - - 2.16e-235 729.0
DPH1_k127_10238002_6 HemY protein N-terminus K02498 - - 2.045e-226 704.0
DPH1_k127_10238002_7 PFAM Type II secretion system protein E K02669,K12203 - - 9.246e-217 674.0
DPH1_k127_10238002_8 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 5.378e-216 672.0
DPH1_k127_10238002_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 597.0
DPH1_k127_10247872_0 Cysteine-rich domain - - - 0.0 1305.0
DPH1_k127_10247872_1 pilus assembly protein FimV K08086 - - 0.0 1238.0
DPH1_k127_10247872_10 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.496e-239 740.0
DPH1_k127_10247872_11 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 6.939e-215 668.0
DPH1_k127_10247872_12 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 571.0
DPH1_k127_10247872_13 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 558.0
DPH1_k127_10247872_14 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 553.0
DPH1_k127_10247872_15 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 529.0
DPH1_k127_10247872_16 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 503.0
DPH1_k127_10247872_17 transposition K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 448.0
DPH1_k127_10247872_18 tRNA (guanine-N7-)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 441.0
DPH1_k127_10247872_19 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 413.0
DPH1_k127_10247872_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0 998.0
DPH1_k127_10247872_20 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 395.0
DPH1_k127_10247872_21 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 374.0
DPH1_k127_10247872_22 Sporulation related domain K03749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
DPH1_k127_10247872_23 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 324.0
DPH1_k127_10247872_24 CNP1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 309.0
DPH1_k127_10247872_25 Colicin V production K03558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
DPH1_k127_10247872_26 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 287.0
DPH1_k127_10247872_27 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000004169 181.0
DPH1_k127_10247872_28 HxlR-like helix-turn-helix - - - 0.0004317 43.0
DPH1_k127_10247872_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.259e-300 921.0
DPH1_k127_10247872_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.805e-290 892.0
DPH1_k127_10247872_5 Ammonium transporter K03320,K06580 - - 1.503e-278 859.0
DPH1_k127_10247872_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 6.105e-263 810.0
DPH1_k127_10247872_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.777e-260 805.0
DPH1_k127_10247872_8 Nucleoside H+ symporter K05820 - - 6.36e-246 760.0
DPH1_k127_10247872_9 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 4.372e-243 752.0
DPH1_k127_10325635_0 von Willebrand factor, type A K02448 - - 0.0 1215.0
DPH1_k127_10325635_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 7.281e-307 943.0
DPH1_k127_10325635_10 - - - - 0.00000000000000000000000000000002356 127.0
DPH1_k127_10325635_11 Phosphate-selective porin O and P K07221 - - 0.00000000000000000000009719 97.0
DPH1_k127_10325635_2 Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 1.277e-290 893.0
DPH1_k127_10325635_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 578.0
DPH1_k127_10325635_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 551.0
DPH1_k127_10325635_5 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 535.0
DPH1_k127_10325635_6 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 342.0
DPH1_k127_10325635_7 Cytochrome c K02305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 309.0
DPH1_k127_10325635_8 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000002218 155.0
DPH1_k127_10325635_9 - - - - 0.000000000000000000000000000000000007505 138.0
DPH1_k127_10392403_0 pdz dhr glgf - - - 0.0 1174.0
DPH1_k127_10392403_1 WD40-like Beta Propeller Repeat - - - 2.532e-220 686.0
DPH1_k127_10392403_2 Tfp pilus assembly protein FimV - - - 0.0000000000003999 70.0
DPH1_k127_10393553_0 SMART Diguanylate phosphodiesterase - - - 1.335e-271 846.0
DPH1_k127_10393553_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.057e-270 836.0
DPH1_k127_10393553_2 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.00000000000000000000000000000000005439 134.0
DPH1_k127_10400510_0 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 358.0
DPH1_k127_10400510_1 Domain of unknown function (DUF4156) - - - 0.00000000000000000000000000000000000000000000000009508 179.0
DPH1_k127_10400510_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000000001381 170.0
DPH1_k127_10400510_3 VanZ like family - - - 0.000000000000672 73.0
DPH1_k127_10400510_4 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.0000000001254 65.0
DPH1_k127_10432268_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1889.0
DPH1_k127_10432268_1 Belongs to the peptidase S16 family - - - 0.0 1508.0
DPH1_k127_10432268_10 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
DPH1_k127_10432268_2 PFAM Multicopper oxidase, type - - - 0.0 1111.0
DPH1_k127_10432268_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0 1071.0
DPH1_k127_10432268_4 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 4.085e-247 766.0
DPH1_k127_10432268_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.418e-231 717.0
DPH1_k127_10432268_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18094 - - 4.296e-206 647.0
DPH1_k127_10432268_7 PFAM multicopper oxidase type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 597.0
DPH1_k127_10432268_8 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 509.0
DPH1_k127_10432268_9 Sulfate permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 437.0
DPH1_k127_10435664_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 3.214e-282 868.0
DPH1_k127_10435664_1 ABC-type uncharacterized transport system - - - 1.261e-219 683.0
DPH1_k127_10435664_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 480.0
DPH1_k127_10435664_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 450.0
DPH1_k127_10435664_4 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 441.0
DPH1_k127_10435664_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 424.0
DPH1_k127_10435664_6 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
DPH1_k127_10435664_7 - - - - 0.0000001186 53.0
DPH1_k127_10459217_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 2.143e-276 850.0
DPH1_k127_10459217_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 522.0
DPH1_k127_10459217_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000001577 233.0
DPH1_k127_10459217_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000004803 124.0
DPH1_k127_10494139_0 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 533.0
DPH1_k127_10494139_1 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 482.0
DPH1_k127_10494139_2 Signal transduction response regulator, receiver K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 293.0
DPH1_k127_10494139_3 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 289.0
DPH1_k127_10552577_0 DNA mismatch repair protein MutS - - - 0.0 1011.0
DPH1_k127_10552577_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 489.0
DPH1_k127_10552577_2 pfam abc K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 421.0
DPH1_k127_10552577_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000123 196.0
DPH1_k127_10614561_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1318.0
DPH1_k127_10614561_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1056.0
DPH1_k127_10614561_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 521.0
DPH1_k127_10614561_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 502.0
DPH1_k127_10614561_4 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 417.0
DPH1_k127_10614561_5 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006878 259.0
DPH1_k127_10614561_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000004192 142.0
DPH1_k127_10614561_7 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000003522 134.0
DPH1_k127_10714232_0 AMP-dependent synthetase - - - 2.307e-303 934.0
DPH1_k127_10714232_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.359e-288 888.0
DPH1_k127_10714232_2 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 1.336e-224 698.0
DPH1_k127_10714232_3 PFAM Ankyrin K10799 - 2.4.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 308.0
DPH1_k127_10714232_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 290.0
DPH1_k127_10714232_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001565 273.0
DPH1_k127_10714232_6 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000000000000001131 199.0
DPH1_k127_10714232_7 - - - - 0.0000000533 54.0
DPH1_k127_10714232_8 - - - - 0.000003752 49.0
DPH1_k127_10820097_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0 1065.0
DPH1_k127_10820097_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.606e-320 983.0
DPH1_k127_10820097_10 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 534.0
DPH1_k127_10820097_11 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 459.0
DPH1_k127_10820097_12 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 429.0
DPH1_k127_10820097_13 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 399.0
DPH1_k127_10820097_14 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 400.0
DPH1_k127_10820097_15 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 373.0
DPH1_k127_10820097_16 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 353.0
DPH1_k127_10820097_17 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
DPH1_k127_10820097_18 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 322.0
DPH1_k127_10820097_19 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 305.0
DPH1_k127_10820097_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.685e-293 900.0
DPH1_k127_10820097_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 286.0
DPH1_k127_10820097_21 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 281.0
DPH1_k127_10820097_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001523 273.0
DPH1_k127_10820097_23 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002892 260.0
DPH1_k127_10820097_24 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000219 249.0
DPH1_k127_10820097_25 ATP synthase I chain K02116 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
DPH1_k127_10820097_26 - - - - 0.000000000000000000000000000000000000000000000000000000000005689 209.0
DPH1_k127_10820097_27 Aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000002282 207.0
DPH1_k127_10820097_28 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000005192 172.0
DPH1_k127_10820097_29 Protein of unknown function (DUF3460) - - - 0.00000000000000000000000000002424 117.0
DPH1_k127_10820097_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 4.466e-259 803.0
DPH1_k127_10820097_30 - - - - 0.0000000000000000000000005489 105.0
DPH1_k127_10820097_31 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000548 68.0
DPH1_k127_10820097_32 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000118 62.0
DPH1_k127_10820097_33 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000007365 52.0
DPH1_k127_10820097_4 Belongs to the thiolase family K00626 - 2.3.1.9 1.542e-239 743.0
DPH1_k127_10820097_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.036e-212 659.0
DPH1_k127_10820097_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 1.592e-205 641.0
DPH1_k127_10820097_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 553.0
DPH1_k127_10820097_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 541.0
DPH1_k127_10820097_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005205 541.0
DPH1_k127_10925526_0 Sodium:alanine symporter family K03310 - - 3.146e-291 896.0
DPH1_k127_10925526_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 591.0
DPH1_k127_10925526_10 - K07039 - - 0.0000000000000000000000000000000000008106 139.0
DPH1_k127_10925526_11 ThiS family K03154 - - 0.00000000000000000000000000000000001296 136.0
DPH1_k127_10925526_12 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000006247 119.0
DPH1_k127_10925526_13 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000001713 70.0
DPH1_k127_10925526_14 - - - - 0.000000276 54.0
DPH1_k127_10925526_15 DNA-binding transcription factor activity K10680 - - 0.000006704 49.0
DPH1_k127_10925526_2 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 533.0
DPH1_k127_10925526_3 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 533.0
DPH1_k127_10925526_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 526.0
DPH1_k127_10925526_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 452.0
DPH1_k127_10925526_6 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 422.0
DPH1_k127_10925526_7 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 382.0
DPH1_k127_10925526_8 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 292.0
DPH1_k127_10925526_9 transporter antisigma-factor antagonist STAS K07122 - - 0.00000000000000000000000000000000000000000000000000000005757 196.0
DPH1_k127_10933020_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1446.0
DPH1_k127_10933020_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1418.0
DPH1_k127_10933020_10 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 2.543e-246 762.0
DPH1_k127_10933020_11 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 1.65e-219 683.0
DPH1_k127_10933020_12 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 7.964e-213 663.0
DPH1_k127_10933020_13 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 1.386e-197 617.0
DPH1_k127_10933020_14 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 576.0
DPH1_k127_10933020_15 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 497.0
DPH1_k127_10933020_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 489.0
DPH1_k127_10933020_17 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 460.0
DPH1_k127_10933020_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 443.0
DPH1_k127_10933020_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 417.0
DPH1_k127_10933020_2 Tex-like protein N-terminal domain K06959 - - 0.0 1394.0
DPH1_k127_10933020_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 404.0
DPH1_k127_10933020_21 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 357.0
DPH1_k127_10933020_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 355.0
DPH1_k127_10933020_23 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 354.0
DPH1_k127_10933020_24 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 299.0
DPH1_k127_10933020_25 Zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 282.0
DPH1_k127_10933020_26 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003206 265.0
DPH1_k127_10933020_27 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002708 262.0
DPH1_k127_10933020_28 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009621 255.0
DPH1_k127_10933020_29 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002377 256.0
DPH1_k127_10933020_3 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0 1193.0
DPH1_k127_10933020_30 - K07039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 267.0
DPH1_k127_10933020_31 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
DPH1_k127_10933020_32 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000000001286 225.0
DPH1_k127_10933020_33 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000261 224.0
DPH1_k127_10933020_34 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000000000003547 170.0
DPH1_k127_10933020_35 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000003099 169.0
DPH1_k127_10933020_36 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000324 163.0
DPH1_k127_10933020_37 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000000000000000000000000002854 158.0
DPH1_k127_10933020_38 DNA-binding protein VF530 - - - 0.00000000000000000000000000000000000000007411 156.0
DPH1_k127_10933020_39 RNA-binding K14761 - - 0.0000000000000000000000000000000000007623 139.0
DPH1_k127_10933020_4 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 2.184e-288 887.0
DPH1_k127_10933020_40 2Fe-2S -binding K02192 - - 0.000000000000000000000000000000000004748 138.0
DPH1_k127_10933020_41 - - - - 0.000000000000000000000000000000006662 130.0
DPH1_k127_10933020_42 HIRAN - - - 0.0000000000000000000000000000001871 128.0
DPH1_k127_10933020_43 Methyltransferase domain - - - 0.000000000000000000000000000001048 124.0
DPH1_k127_10933020_44 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000001823 119.0
DPH1_k127_10933020_45 Metal dependent phosphohydrolases with conserved 'HD' motif. K07012 - - 0.000000000000000000000000013 115.0
DPH1_k127_10933020_46 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000006011 115.0
DPH1_k127_10933020_47 Nucleotidyltransferase domain - - - 0.000000000000000000000794 99.0
DPH1_k127_10933020_48 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000005131 94.0
DPH1_k127_10933020_49 Protein of unknown function (DUF433) - - - 0.0000000000000000000141 94.0
DPH1_k127_10933020_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.704e-284 874.0
DPH1_k127_10933020_50 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000001866 68.0
DPH1_k127_10933020_6 PFAM peptidase - - - 3.85e-283 871.0
DPH1_k127_10933020_7 ABC transporter K02021,K11085 - - 1.766e-279 867.0
DPH1_k127_10933020_8 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.565e-269 830.0
DPH1_k127_10933020_9 AAA C-terminal domain K07478 - - 1.066e-268 833.0
DPH1_k127_11126433_0 PFAM Aminoacyl-tRNA synthetase, class Ib K01867 - 6.1.1.2 9.884e-267 821.0
DPH1_k127_11126433_1 NnrS protein K07234 - - 2.771e-258 797.0
DPH1_k127_11126433_10 response regulator - - - 0.0000000000001069 71.0
DPH1_k127_11126433_11 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 0.000005658 49.0
DPH1_k127_11126433_12 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00006318 45.0
DPH1_k127_11126433_2 PFAM PHP C-terminal K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 579.0
DPH1_k127_11126433_3 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 538.0
DPH1_k127_11126433_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 459.0
DPH1_k127_11126433_5 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 428.0
DPH1_k127_11126433_6 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 305.0
DPH1_k127_11126433_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009234 256.0
DPH1_k127_11126433_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000001934 220.0
DPH1_k127_11126433_9 tigrfam pep-cterm - - - 0.00000000000000000000000000000006176 130.0
DPH1_k127_11136164_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.916e-241 747.0
DPH1_k127_11136164_1 Sodium:dicarboxylate symporter family K11102 - - 5.334e-236 733.0
DPH1_k127_11136164_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 4.203e-205 638.0
DPH1_k127_11136164_3 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 535.0
DPH1_k127_11232875_0 FtsX-like permease family K02004 - - 0.0 1514.0
DPH1_k127_11232875_1 Heavy metal transport detoxification protein K17686,K19597 - 3.6.3.54 0.0 1416.0
DPH1_k127_11232875_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 499.0
DPH1_k127_11232875_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 489.0
DPH1_k127_11232875_12 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 479.0
DPH1_k127_11232875_13 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 432.0
DPH1_k127_11232875_14 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 406.0
DPH1_k127_11232875_15 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 377.0
DPH1_k127_11232875_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 364.0
DPH1_k127_11232875_17 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000007649 244.0
DPH1_k127_11232875_18 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006379 237.0
DPH1_k127_11232875_19 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000473 235.0
DPH1_k127_11232875_2 Lipocalin-like domain - - - 5.206e-233 722.0
DPH1_k127_11232875_20 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000002497 211.0
DPH1_k127_11232875_21 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000000000000000000000000000001494 192.0
DPH1_k127_11232875_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000003018 186.0
DPH1_k127_11232875_23 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000000000000000000000004586 128.0
DPH1_k127_11232875_24 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000001325 103.0
DPH1_k127_11232875_25 - - - - 0.0000000000000000000006976 96.0
DPH1_k127_11232875_27 - - - - 0.000000000002573 66.0
DPH1_k127_11232875_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 8.659e-233 726.0
DPH1_k127_11232875_4 LppC putative lipoprotein K07121 - - 8.846e-216 676.0
DPH1_k127_11232875_5 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 3.324e-208 649.0
DPH1_k127_11232875_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 4.404e-207 646.0
DPH1_k127_11232875_7 'signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 557.0
DPH1_k127_11232875_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 499.0
DPH1_k127_11232875_9 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 497.0
DPH1_k127_11355537_0 Peptidase family M1 domain - - - 0.0 1282.0
DPH1_k127_11355537_1 pdz dhr glgf - - - 4.594e-265 816.0
DPH1_k127_11355537_2 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 554.0
DPH1_k127_11355537_3 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 424.0
DPH1_k127_11355537_4 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.000000000000000000000000000000000000000000000000000000000000000005354 229.0
DPH1_k127_11355537_5 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000000000001108 104.0
DPH1_k127_11355537_6 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.000009213 52.0
DPH1_k127_11366819_0 Involved in the TonB-independent uptake of proteins K03641 - - 2.852e-273 842.0
DPH1_k127_11366819_1 TolA C-terminal K03646 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 524.0
DPH1_k127_11366819_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 489.0
DPH1_k127_11366819_3 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 430.0
DPH1_k127_11366819_4 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 321.0
DPH1_k127_11366819_5 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002081 257.0
DPH1_k127_11366819_6 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009835 246.0
DPH1_k127_11456350_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0 1053.0
DPH1_k127_11456350_1 TIGRFAM A G-specific adenine glycosylase K03575 - - 1.341e-219 684.0
DPH1_k127_11456350_10 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000000000002946 131.0
DPH1_k127_11456350_11 PFAM Flagellar protein FlaG protein K06603 - - 0.0000000000000000000000000001327 115.0
DPH1_k127_11456350_2 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 591.0
DPH1_k127_11456350_3 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 495.0
DPH1_k127_11456350_4 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 383.0
DPH1_k127_11456350_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 323.0
DPH1_k127_11456350_6 flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000712 256.0
DPH1_k127_11456350_7 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.00000000000000000000000000000000000000000000000000000000000000006585 222.0
DPH1_k127_11456350_8 Flagellar protein FliT K02423 - - 0.0000000000000000000000000000000000000000000000000000000000007457 210.0
DPH1_k127_11456350_9 PFAM Modulator of Rho-dependent transcription termination K19000 - - 0.0000000000000000000000000000000000000000000158 164.0
DPH1_k127_11591268_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1801.0
DPH1_k127_11591268_1 cytochrome C peroxidase - - - 0.0 1311.0
DPH1_k127_11591268_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 612.0
DPH1_k127_11591268_11 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 408.0
DPH1_k127_11591268_12 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 401.0
DPH1_k127_11591268_13 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 286.0
DPH1_k127_11591268_14 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002141 240.0
DPH1_k127_11591268_15 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000000000000000000000000000000000009076 214.0
DPH1_k127_11591268_16 - - - - 0.00000000000000000000000000000000000000000000000000000006836 196.0
DPH1_k127_11591268_17 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000000000000000000000000000000000003116 191.0
DPH1_k127_11591268_18 - - - - 0.0000000000000000000000000000000000000000000000000001474 188.0
DPH1_k127_11591268_19 - - - - 0.0000000000000000000000000000000000003604 141.0
DPH1_k127_11591268_2 PFAM Multicopper oxidase, type K04753,K08100,K14588 - 1.3.3.5 0.0 1000.0
DPH1_k127_11591268_21 DDE domain - - - 0.000000000000000006146 85.0
DPH1_k127_11591268_3 Putative Na+/H+ antiporter - - - 2.763e-261 806.0
DPH1_k127_11591268_4 PFAM Peptidase S1 S6, chymotrypsin Hap K08070 - 1.3.1.74 5.587e-240 743.0
DPH1_k127_11591268_5 outer membrane efflux protein K15725 - - 3.481e-233 725.0
DPH1_k127_11591268_6 Bacterial protein of unknown function (DUF839) K07093 - - 3.757e-227 707.0
DPH1_k127_11591268_7 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 7.767e-217 673.0
DPH1_k127_11591268_8 Putative aminopeptidase - - - 2.045e-205 642.0
DPH1_k127_11591268_9 PFAM heat shock protein DnaJ K05516 - - 2.055e-196 613.0
DPH1_k127_11626822_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1334.0
DPH1_k127_11626822_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 609.0
DPH1_k127_11626822_2 PFAM RIO-like kinase K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 540.0
DPH1_k127_11626822_3 antibiotic catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 456.0
DPH1_k127_11626822_4 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 358.0
DPH1_k127_11626822_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 305.0
DPH1_k127_11626822_6 Putative quorum-sensing-regulated virulence factor K09954 - - 0.00000000000000000000000000000000000000251 146.0
DPH1_k127_11626822_8 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000004718 113.0
DPH1_k127_11626822_9 Sel1 domain protein repeat-containing protein K07126 - - 0.0005303 44.0
DPH1_k127_11659806_0 Regulator of K conductance, C-terminal - - - 0.0 1069.0
DPH1_k127_11659806_1 Belongs to the RNase T2 family K01166 - 3.1.27.1 1.261e-201 631.0
DPH1_k127_11659806_2 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 415.0
DPH1_k127_11659806_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 353.0
DPH1_k127_11659806_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000000001858 183.0
DPH1_k127_11684410_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1364.0
DPH1_k127_11684410_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1176.0
DPH1_k127_11684410_10 EamA-like transporter family K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 556.0
DPH1_k127_11684410_11 TIGRFAM Pilus biogenesis stability type IV, PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
DPH1_k127_11684410_12 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 439.0
DPH1_k127_11684410_13 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 401.0
DPH1_k127_11684410_14 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 375.0
DPH1_k127_11684410_15 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 310.0
DPH1_k127_11684410_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 281.0
DPH1_k127_11684410_17 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000797 279.0
DPH1_k127_11684410_18 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003525 271.0
DPH1_k127_11684410_19 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001915 263.0
DPH1_k127_11684410_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.096e-298 916.0
DPH1_k127_11684410_20 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003603 243.0
DPH1_k127_11684410_21 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000383 224.0
DPH1_k127_11684410_22 PFAM Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000000000000000000000000000000000000009527 224.0
DPH1_k127_11684410_23 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000000000001266 151.0
DPH1_k127_11684410_24 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000000003571 128.0
DPH1_k127_11684410_25 Tetratricopeptide repeat - - - 0.000000000000000000000002727 110.0
DPH1_k127_11684410_26 Tetratricopeptide repeat - - - 0.0000000000000000000004869 104.0
DPH1_k127_11684410_27 PFAM Transposase, IS4-like - - - 0.00000000000000000006047 90.0
DPH1_k127_11684410_28 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000004067 64.0
DPH1_k127_11684410_3 repeat protein - - - 1.267e-274 848.0
DPH1_k127_11684410_4 synthetase, class II (G H P K01892 - 6.1.1.21 1.594e-264 816.0
DPH1_k127_11684410_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 7.795e-263 810.0
DPH1_k127_11684410_6 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 3.024e-254 783.0
DPH1_k127_11684410_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 1.632e-230 717.0
DPH1_k127_11684410_8 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 6.294e-224 695.0
DPH1_k127_11684410_9 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 605.0
DPH1_k127_11696907_0 MMPL family K07003 - - 0.0 1544.0
DPH1_k127_11696907_1 Selenide, water dikinase K01008 - 2.7.9.3 0.0 1330.0
DPH1_k127_11696907_10 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
DPH1_k127_11696907_11 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
DPH1_k127_11696907_12 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 396.0
DPH1_k127_11696907_13 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 355.0
DPH1_k127_11696907_14 Flagellar motor switch K02417,K03225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 291.0
DPH1_k127_11696907_15 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 286.0
DPH1_k127_11696907_16 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003969 272.0
DPH1_k127_11696907_17 PFAM Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000001608 217.0
DPH1_k127_11696907_18 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000001031 216.0
DPH1_k127_11696907_19 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000000000000000007985 166.0
DPH1_k127_11696907_2 AMP-dependent synthetase K00666 - - 0.0 1183.0
DPH1_k127_11696907_20 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000000002357 153.0
DPH1_k127_11696907_21 flagellar biosynthesis protein K02418 - - 0.00000000000000000000000000000000005417 138.0
DPH1_k127_11696907_22 glycosyl transferase, family 2 - - - 0.00002569 47.0
DPH1_k127_11696907_3 Membrane - - - 2.695e-268 837.0
DPH1_k127_11696907_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 5.966e-265 818.0
DPH1_k127_11696907_5 PFAM aminotransferase, class I K00652 - 2.3.1.47 1.381e-250 774.0
DPH1_k127_11696907_6 Domain of unknown function (DUF3463) - - - 2.968e-248 766.0
DPH1_k127_11696907_7 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 3.129e-208 650.0
DPH1_k127_11696907_8 flagellar motor switch protein FliM K02416 - - 9.35e-199 620.0
DPH1_k127_11696907_9 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 563.0
DPH1_k127_11739383_0 protein synthesis factor, GTP-binding K06207 - - 0.0 1189.0
DPH1_k127_11739383_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 4.5e-268 827.0
DPH1_k127_11739383_2 WD40-like Beta Propeller Repeat - - - 5.132e-232 719.0
DPH1_k127_11739383_3 domain, Protein K00703,K07082 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000227 256.0
DPH1_k127_11739383_4 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000000000000000000000000000000573 219.0
DPH1_k127_11739383_5 - - - - 0.000000000000000000000000000001647 123.0
DPH1_k127_11739383_6 PFAM Restriction endonuclease, type I, R subunit Type III, Res subunit K01156 - 3.1.21.5 0.00000000000241 66.0
DPH1_k127_11935132_0 Cache domain - - - 2.065e-299 924.0
DPH1_k127_11935132_1 malic enzyme K00029 - 1.1.1.40 2.695e-225 699.0
DPH1_k127_11935132_2 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001014 269.0
DPH1_k127_11935132_3 PFAM SH3, type 3 - - - 0.000000000000000000000000000005662 119.0
DPH1_k127_11966353_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 602.0
DPH1_k127_11966353_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 446.0
DPH1_k127_11966353_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 292.0
DPH1_k127_11966353_3 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000000000000000005467 178.0
DPH1_k127_11992335_0 type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 463.0
DPH1_k127_11992335_1 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001706 248.0
DPH1_k127_11992335_2 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000002245 226.0
DPH1_k127_12322991_0 pyruvate-flavodoxin oxidoreductase activity - - - 0.0 1162.0
DPH1_k127_12322991_1 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1069.0
DPH1_k127_12322991_10 Uncharacterized protein conserved in bacteria (DUF2331) - - - 1.209e-224 698.0
DPH1_k127_12322991_11 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 3.161e-203 634.0
DPH1_k127_12322991_12 Chromate resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 569.0
DPH1_k127_12322991_13 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 551.0
DPH1_k127_12322991_14 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 538.0
DPH1_k127_12322991_15 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 503.0
DPH1_k127_12322991_16 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 436.0
DPH1_k127_12322991_17 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 371.0
DPH1_k127_12322991_18 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 364.0
DPH1_k127_12322991_19 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 310.0
DPH1_k127_12322991_2 Uncharacterized protein family (UPF0051) K09014 - - 1.309e-311 955.0
DPH1_k127_12322991_20 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 308.0
DPH1_k127_12322991_21 PFAM SH3, type 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 297.0
DPH1_k127_12322991_22 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003215 266.0
DPH1_k127_12322991_23 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000001581 264.0
DPH1_k127_12322991_24 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000000000000004412 217.0
DPH1_k127_12322991_25 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000002315 216.0
DPH1_k127_12322991_26 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000000000004707 135.0
DPH1_k127_12322991_27 NADH ubiquinone oxidoreductase complex i intermediate-associated protein 30 - - - 0.000000000000000000000000000000001604 129.0
DPH1_k127_12322991_28 - - - - 0.0000000000000000000000000000305 121.0
DPH1_k127_12322991_29 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000008308 82.0
DPH1_k127_12322991_3 Chromate transporter K07240 - - 2.096e-289 889.0
DPH1_k127_12322991_30 Transposase IS200 like K07491 - - 0.00000001203 56.0
DPH1_k127_12322991_31 Transposase K07491 - - 0.0005311 42.0
DPH1_k127_12322991_4 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 7.135e-284 874.0
DPH1_k127_12322991_5 - - - - 7.338e-273 841.0
DPH1_k127_12322991_6 PFAM DNA-repair protein, UmuC-like K03502 - - 2.789e-269 831.0
DPH1_k127_12322991_7 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.584e-259 801.0
DPH1_k127_12322991_8 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 2.031e-251 781.0
DPH1_k127_12322991_9 Uncharacterized protein family (UPF0051) K09015 - - 4.441e-250 775.0
DPH1_k127_12337684_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 535.0
DPH1_k127_12337684_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 286.0
DPH1_k127_12337684_2 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004735 245.0
DPH1_k127_12337684_4 Alpha/beta hydrolase family - - - 0.0000000007844 62.0
DPH1_k127_12337684_5 VIT family - - - 0.0000002295 54.0
DPH1_k127_12339845_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.0 1555.0
DPH1_k127_12339845_1 Involved in the biosynthesis of porphyrin-containing compound - - - 4.404e-197 615.0
DPH1_k127_12339845_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 434.0
DPH1_k127_12339845_3 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000007517 157.0
DPH1_k127_1296278_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1256.0
DPH1_k127_1296278_1 Sulfatase K01130 - 3.1.6.1 0.0 1225.0
DPH1_k127_1296278_10 cell shape determining protein, MreB Mrl K03569 - - 1.6e-219 683.0
DPH1_k127_1296278_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 1.915e-205 641.0
DPH1_k127_1296278_12 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 601.0
DPH1_k127_1296278_13 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 567.0
DPH1_k127_1296278_14 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 557.0
DPH1_k127_1296278_15 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 502.0
DPH1_k127_1296278_16 ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 508.0
DPH1_k127_1296278_17 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 460.0
DPH1_k127_1296278_18 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 396.0
DPH1_k127_1296278_19 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 358.0
DPH1_k127_1296278_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0 996.0
DPH1_k127_1296278_20 Predicted periplasmic protein (DUF2092) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
DPH1_k127_1296278_21 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 346.0
DPH1_k127_1296278_22 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
DPH1_k127_1296278_23 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 308.0
DPH1_k127_1296278_24 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001414 250.0
DPH1_k127_1296278_25 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001702 245.0
DPH1_k127_1296278_26 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
DPH1_k127_1296278_27 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000000000000000000000008136 207.0
DPH1_k127_1296278_28 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000003409 199.0
DPH1_k127_1296278_29 shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000000000000000007405 194.0
DPH1_k127_1296278_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.73e-308 945.0
DPH1_k127_1296278_30 - - - - 0.00000000000000000000000000000000000000000000000000006361 195.0
DPH1_k127_1296278_31 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000002565 173.0
DPH1_k127_1296278_32 - - - - 0.00000000000000000000000000000000000003611 149.0
DPH1_k127_1296278_33 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000001208 139.0
DPH1_k127_1296278_34 Lysozyme inhibitor LprI - - - 0.00000000000000000000001008 102.0
DPH1_k127_1296278_35 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000006558 49.0
DPH1_k127_1296278_36 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00001655 49.0
DPH1_k127_1296278_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.628e-301 927.0
DPH1_k127_1296278_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 4.918e-284 876.0
DPH1_k127_1296278_6 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 2.828e-243 753.0
DPH1_k127_1296278_7 PFAM aminotransferase, class I K00842,K14155 - 4.4.1.8 1.701e-240 746.0
DPH1_k127_1296278_8 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 8.984e-235 727.0
DPH1_k127_1296278_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 1.073e-219 684.0
DPH1_k127_1397833_0 DinB superfamily - - - 0.0 1306.0
DPH1_k127_1397833_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 444.0
DPH1_k127_1397833_2 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 296.0
DPH1_k127_1397833_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000004009 261.0
DPH1_k127_1408278_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1605.0
DPH1_k127_1408278_1 RNA polymerase recycling family C-terminal K03580 - - 0.0 1566.0
DPH1_k127_1408278_10 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 479.0
DPH1_k127_1408278_11 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 450.0
DPH1_k127_1408278_12 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 364.0
DPH1_k127_1408278_13 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
DPH1_k127_1408278_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 336.0
DPH1_k127_1408278_15 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 319.0
DPH1_k127_1408278_16 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 289.0
DPH1_k127_1408278_17 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 287.0
DPH1_k127_1408278_18 Cytochrome C oxidase, cbb3-type, subunit III K12263 - - 0.000000000000000000000000000000000000000000000000000001963 191.0
DPH1_k127_1408278_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1418.0
DPH1_k127_1408278_3 zinc metalloprotease K11749 - - 1.321e-282 870.0
DPH1_k127_1408278_4 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 4.975e-275 850.0
DPH1_k127_1408278_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 4.047e-244 758.0
DPH1_k127_1408278_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 539.0
DPH1_k127_1408278_7 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 508.0
DPH1_k127_1408278_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 503.0
DPH1_k127_1408278_9 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 481.0
DPH1_k127_1442432_0 ABC transporter C-terminal domain K15738 - - 0.0 1217.0
DPH1_k127_1442432_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 4.183e-206 644.0
DPH1_k127_1442432_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 466.0
DPH1_k127_1442432_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 449.0
DPH1_k127_1442432_4 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 442.0
DPH1_k127_1442432_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 410.0
DPH1_k127_1442432_6 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 411.0
DPH1_k127_1442432_7 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 279.0
DPH1_k127_1442432_8 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000002908 209.0
DPH1_k127_1442432_9 Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000007877 207.0
DPH1_k127_1662002_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1330.0
DPH1_k127_1662002_1 Diguanylate cyclase - - - 6.027e-289 893.0
DPH1_k127_1662002_2 PFAM aminotransferase, class I K00812 - 2.6.1.1 6.019e-244 757.0
DPH1_k127_1662002_3 tRNA rRNA methyltransferase, SpoU K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 417.0
DPH1_k127_1662002_4 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 351.0
DPH1_k127_1662002_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000606 223.0
DPH1_k127_1662002_6 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000000000000000000000007818 181.0
DPH1_k127_1662002_7 Diguanylate cyclase - - - 0.00000000001059 64.0
DPH1_k127_1662002_8 ISXO2-like transposase domain - - - 0.0003504 43.0
DPH1_k127_166930_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1420.0
DPH1_k127_166930_1 Threonine synthase K01733 - 4.2.3.1 1.888e-272 840.0
DPH1_k127_166930_10 Small metal-binding protein - - - 0.000000000000000000000000000000000000000000000000001484 185.0
DPH1_k127_166930_11 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000002482 168.0
DPH1_k127_166930_2 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 9.197e-270 831.0
DPH1_k127_166930_3 homoserine dehydrogenase K00003 - 1.1.1.3 3.637e-259 801.0
DPH1_k127_166930_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 6.441e-220 682.0
DPH1_k127_166930_5 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 605.0
DPH1_k127_166930_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 474.0
DPH1_k127_166930_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 404.0
DPH1_k127_166930_8 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000007015 235.0
DPH1_k127_166930_9 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000000003148 226.0
DPH1_k127_1670483_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1180.0
DPH1_k127_1670483_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.735e-285 877.0
DPH1_k127_1670483_2 succinate dehydrogenase fumarate reductase K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 482.0
DPH1_k127_1670483_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 423.0
DPH1_k127_1670483_4 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000000000000000008699 154.0
DPH1_k127_1670483_5 endonuclease activity - - - 0.00000000000000000000000000000002797 126.0
DPH1_k127_1784215_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 355.0
DPH1_k127_1784215_1 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 336.0
DPH1_k127_1784215_2 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004204 244.0
DPH1_k127_1784215_3 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000000000000000000000000000008512 207.0
DPH1_k127_1790639_0 HELICc2 K03722 - 3.6.4.12 0.0 1223.0
DPH1_k127_1790639_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 2.5e-323 993.0
DPH1_k127_1790639_10 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 311.0
DPH1_k127_1790639_11 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 290.0
DPH1_k127_1790639_12 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002859 254.0
DPH1_k127_1790639_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000518 216.0
DPH1_k127_1790639_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000000002813 199.0
DPH1_k127_1790639_15 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000000003987 169.0
DPH1_k127_1790639_16 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000000000000000001072 164.0
DPH1_k127_1790639_17 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000001338 164.0
DPH1_k127_1790639_18 - K06950 - - 0.00000000000000000000000000000000000000649 145.0
DPH1_k127_1790639_19 Transposase DDE domain - - - 0.000000000007704 64.0
DPH1_k127_1790639_2 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 2.594e-292 897.0
DPH1_k127_1790639_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 6.905e-224 695.0
DPH1_k127_1790639_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 2.889e-218 678.0
DPH1_k127_1790639_5 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 7.829e-209 650.0
DPH1_k127_1790639_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 2.706e-195 610.0
DPH1_k127_1790639_7 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 492.0
DPH1_k127_1790639_8 response regulator receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 456.0
DPH1_k127_1790639_9 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 391.0
DPH1_k127_1795085_0 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor - - - 3.467e-313 962.0
DPH1_k127_1795085_1 SMART Diguanylate cyclase K13590 - 2.7.7.65 2.136e-307 948.0
DPH1_k127_1795085_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 2.612e-207 655.0
DPH1_k127_1795085_3 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 477.0
DPH1_k127_1795085_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 396.0
DPH1_k127_1795085_5 PFAM Flagellar protein FlaG protein K06603 - - 0.00000000000000000000000000003396 119.0
DPH1_k127_1795085_6 PFAM Transposase, IS4-like K07481 - - 0.0000000000000000000002728 98.0
DPH1_k127_1800085_0 ABC transporter K06020 - 3.6.3.25 0.0 1082.0
DPH1_k127_1800085_1 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 457.0
DPH1_k127_1800085_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002259 278.0
DPH1_k127_1800085_4 Protein of unknown function (DUF2835) - - - 0.0000000000000000000000000000000000001786 141.0
DPH1_k127_1800085_5 Peptidase M4 - - - 0.000000000000000000000000000009847 118.0
DPH1_k127_1800085_6 Domain of unknown function (DUF4160) - - - 0.000000000001348 67.0
DPH1_k127_1822138_0 - - - - 0.0 1156.0
DPH1_k127_1822138_1 ABC transporter transmembrane region K06147 - - 0.0 1105.0
DPH1_k127_1822138_10 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 552.0
DPH1_k127_1822138_11 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 549.0
DPH1_k127_1822138_12 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 547.0
DPH1_k127_1822138_13 restriction endonuclease K07448 GO:0001101,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009295,GO:0009415,GO:0009628,GO:0009987,GO:0010035,GO:0015666,GO:0016787,GO:0016788,GO:0032067,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051599,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 496.0
DPH1_k127_1822138_14 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 488.0
DPH1_k127_1822138_15 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 474.0
DPH1_k127_1822138_16 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 454.0
DPH1_k127_1822138_17 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000829 447.0
DPH1_k127_1822138_18 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 390.0
DPH1_k127_1822138_19 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
DPH1_k127_1822138_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1053.0
DPH1_k127_1822138_20 deaminase zinc-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 364.0
DPH1_k127_1822138_21 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 358.0
DPH1_k127_1822138_22 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 329.0
DPH1_k127_1822138_23 low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 317.0
DPH1_k127_1822138_24 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 304.0
DPH1_k127_1822138_25 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 261.0
DPH1_k127_1822138_26 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002847 259.0
DPH1_k127_1822138_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005509 259.0
DPH1_k127_1822138_28 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000001446 237.0
DPH1_k127_1822138_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000001765 215.0
DPH1_k127_1822138_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.274e-311 956.0
DPH1_k127_1822138_30 - - - - 0.00000000000000000000000000000000000000000000000000000000001596 206.0
DPH1_k127_1822138_31 Thiamine monophosphate synthase - - - 0.000000000000000000000000000000000000000000000000000000002473 206.0
DPH1_k127_1822138_32 - - - - 0.000000000000000000000000000000000000000000000006263 173.0
DPH1_k127_1822138_33 PFAM Transposase, IS4-like - - - 0.000000000000000000000000000000000000000001304 157.0
DPH1_k127_1822138_34 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000000000000003278 146.0
DPH1_k127_1822138_35 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000000000000000000003054 143.0
DPH1_k127_1822138_36 - - - - 0.00000000000000000000000000325 115.0
DPH1_k127_1822138_4 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 1.004e-294 906.0
DPH1_k127_1822138_5 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 1.173e-275 849.0
DPH1_k127_1822138_6 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.815e-238 737.0
DPH1_k127_1822138_7 Psort location CytoplasmicMembrane, score 10.00 - - - 2.637e-237 737.0
DPH1_k127_1822138_8 AAA domain K02450 - - 1.295e-228 712.0
DPH1_k127_1822138_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 579.0
DPH1_k127_1844982_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 7.094e-263 812.0
DPH1_k127_1844982_1 tRNA rRNA methyltransferase, SpoU K03437 - - 0.0000000000000000000000000000000000000000000000000001946 185.0
DPH1_k127_1921850_0 alpha-ribazole phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 317.0
DPH1_k127_1921850_1 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 0.000000000000000000000000000000000000000000000005917 174.0
DPH1_k127_1921850_2 PFAM Nucleotidyltransferase - - - 0.000000000000000000000000000000000000003554 149.0
DPH1_k127_1921850_3 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.000000000000000000000000000000000000003644 147.0
DPH1_k127_1921850_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000000004254 143.0
DPH1_k127_1921850_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000002972 136.0
DPH1_k127_2103750_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 1.181e-273 842.0
DPH1_k127_2103750_1 Cysteine-rich domain K11473 - - 8.193e-264 815.0
DPH1_k127_2103750_10 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 499.0
DPH1_k127_2103750_11 Cytidylyltransferase K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 484.0
DPH1_k127_2103750_12 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 437.0
DPH1_k127_2103750_13 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 408.0
DPH1_k127_2103750_14 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 398.0
DPH1_k127_2103750_15 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 392.0
DPH1_k127_2103750_16 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 359.0
DPH1_k127_2103750_17 invasion associated locus B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 336.0
DPH1_k127_2103750_18 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 327.0
DPH1_k127_2103750_19 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 320.0
DPH1_k127_2103750_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 3.321e-200 624.0
DPH1_k127_2103750_20 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
DPH1_k127_2103750_21 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000002956 216.0
DPH1_k127_2103750_22 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000000000000002501 173.0
DPH1_k127_2103750_23 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000000001447 170.0
DPH1_k127_2103750_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000003546 171.0
DPH1_k127_2103750_26 hmm pf01609 - - - 0.000000001584 62.0
DPH1_k127_2103750_3 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 7.32e-199 620.0
DPH1_k127_2103750_4 PFAM Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 607.0
DPH1_k127_2103750_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 569.0
DPH1_k127_2103750_6 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 541.0
DPH1_k127_2103750_7 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 516.0
DPH1_k127_2103750_8 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 509.0
DPH1_k127_2103750_9 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 509.0
DPH1_k127_2152629_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 4.458e-242 751.0
DPH1_k127_2152629_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 347.0
DPH1_k127_2152629_2 Protein of unknown function (DUF2971) - - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
DPH1_k127_2152629_3 DNA mismatch repair protein MutS - - - 0.00000000000000000000000000006763 115.0
DPH1_k127_2152629_4 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000001045 68.0
DPH1_k127_2231312_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1481.0
DPH1_k127_2231312_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0 1333.0
DPH1_k127_2231312_10 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 0.0007442 43.0
DPH1_k127_2231312_2 Cytochrome c - - - 0.0 1189.0
DPH1_k127_2231312_3 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1097.0
DPH1_k127_2231312_4 Belongs to the GPI family K01810 - 5.3.1.9 0.0 1060.0
DPH1_k127_2231312_5 PFAM Transposase, IS66 K07484 - - 0.0 1019.0
DPH1_k127_2231312_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.474e-307 944.0
DPH1_k127_2231312_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 7.498e-270 832.0
DPH1_k127_2231312_8 IS66 Orf2 like K07484 - - 0.00000000000000000000000000000317 119.0
DPH1_k127_2231312_9 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 0.0000000000000000000000004903 109.0
DPH1_k127_2252352_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 2593.0
DPH1_k127_2252352_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 1.517e-311 958.0
DPH1_k127_2252352_2 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 312.0
DPH1_k127_2331487_0 Domain of unknown function (DUF4372) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 604.0
DPH1_k127_2331487_1 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 333.0
DPH1_k127_2331487_2 MucB/RseB C-terminal domain K03598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001403 279.0
DPH1_k127_2331487_3 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.000000000000000000000000000000000000000000000000102 181.0
DPH1_k127_2331487_4 PFAM Transposase - - - 0.00000000000000000000000001262 111.0
DPH1_k127_2332361_0 Uncharacterized protein conserved in bacteria (DUF2130) - - - 1.302e-243 756.0
DPH1_k127_2332361_1 PFAM Transposase IS3 IS911 K07483 - - 0.0000000000000000000000000000000000002706 141.0
DPH1_k127_2332361_2 - - - - 0.0000000000000000000001118 103.0
DPH1_k127_2332361_3 Protein of unknown function DUF45 K07043 - - 0.00000000000000000001232 95.0
DPH1_k127_2332361_4 Transposase IS116/IS110/IS902 family - - - 0.000000000000000001126 87.0
DPH1_k127_2361555_0 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 563.0
DPH1_k127_2361555_1 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 475.0
DPH1_k127_2361555_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 411.0
DPH1_k127_2361555_3 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 384.0
DPH1_k127_2361555_4 HupE UreJ protein K03192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 329.0
DPH1_k127_2361555_5 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 303.0
DPH1_k127_2361555_6 hydrogenase maturation protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005437 259.0
DPH1_k127_2361555_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007287 247.0
DPH1_k127_2361555_8 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000000000000000002225 209.0
DPH1_k127_2361555_9 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
DPH1_k127_2361972_0 TIGRFAM TonB-dependent vitamin B12 receptor K16092 - - 0.0 1179.0
DPH1_k127_2361972_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 3.912e-263 816.0
DPH1_k127_2361972_10 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000004288 96.0
DPH1_k127_2361972_11 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
DPH1_k127_2361972_2 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 420.0
DPH1_k127_2361972_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 394.0
DPH1_k127_2361972_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 365.0
DPH1_k127_2361972_5 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000001274 207.0
DPH1_k127_2361972_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000016 201.0
DPH1_k127_2361972_7 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000001255 126.0
DPH1_k127_2361972_8 Transglutaminase-like superfamily - - - 0.0000000000000000000000003394 107.0
DPH1_k127_2361972_9 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000001711 100.0
DPH1_k127_2381036_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 0.0 1417.0
DPH1_k127_2381036_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02622 - - 0.0 1237.0
DPH1_k127_2381036_2 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 526.0
DPH1_k127_2381036_3 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 464.0
DPH1_k127_2381036_4 PFAM Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000003327 165.0
DPH1_k127_2390935_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0 1035.0
DPH1_k127_2390935_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1006.0
DPH1_k127_2390935_11 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 293.0
DPH1_k127_2390935_12 Domain of unknown function (DUF4156) - - - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
DPH1_k127_2390935_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000001594 216.0
DPH1_k127_2390935_15 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000002666 178.0
DPH1_k127_2390935_16 manually curated - - - 0.00000000000003256 73.0
DPH1_k127_2390935_17 - - - - 0.0000000000001675 72.0
DPH1_k127_2390935_18 - - - - 0.0009642 46.0
DPH1_k127_2390935_2 Metal-dependent hydrolase HDOD - - - 3.517e-262 812.0
DPH1_k127_2390935_3 CHAD - - - 2.101e-259 806.0
DPH1_k127_2390935_4 Belongs to the thiolase family K00632 - 2.3.1.16 2.881e-249 771.0
DPH1_k127_2390935_5 Belongs to the UPF0176 family K07146 - - 1.226e-195 610.0
DPH1_k127_2390935_6 E3 Ubiquitin ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 574.0
DPH1_k127_2390935_7 TIGRFAM Polyphosphate nucleotide phosphotransferase, PPK2 K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 471.0
DPH1_k127_2390935_8 SMART HTH transcriptional regulator, Crp K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 406.0
DPH1_k127_2390935_9 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 366.0
DPH1_k127_2422355_0 DHH family K07462 - - 0.0 1137.0
DPH1_k127_2422355_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.106e-278 858.0
DPH1_k127_2422355_10 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000132 48.0
DPH1_k127_2422355_2 PhoH-like protein K06217 - - 2.206e-197 617.0
DPH1_k127_2422355_3 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 551.0
DPH1_k127_2422355_4 PFAM MgtC SapB transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 511.0
DPH1_k127_2422355_5 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 469.0
DPH1_k127_2422355_6 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 405.0
DPH1_k127_2422355_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 293.0
DPH1_k127_2422355_8 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000514 258.0
DPH1_k127_2422355_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006769 220.0
DPH1_k127_2462674_0 Alginate export - - - 8.333e-319 980.0
DPH1_k127_2462674_1 PFAM Lytic transglycosylase-like, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 357.0
DPH1_k127_2462674_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000111 252.0
DPH1_k127_2462674_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000001178 156.0
DPH1_k127_2462674_5 - - - - 0.00000006132 53.0
DPH1_k127_2490085_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1840.0
DPH1_k127_2490085_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 1.944e-307 944.0
DPH1_k127_2490085_2 TIGRFAM Diguanylate cyclase - - - 1.307e-292 901.0
DPH1_k127_2490085_3 TIGRFAM Phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 481.0
DPH1_k127_2490085_4 malic enzyme K00029 - 1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 397.0
DPH1_k127_2490085_5 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002806 256.0
DPH1_k127_2490085_6 - - - - 0.000000000000000000000000000000000000000000000000005882 183.0
DPH1_k127_2547185_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 3.592e-215 670.0
DPH1_k127_2547185_1 cytochrome c peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 470.0
DPH1_k127_2547185_2 - - - - 0.0000000000000000000006727 109.0
DPH1_k127_2572798_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1506.0
DPH1_k127_2572798_1 TIGRFAM glycine oxidase ThiO K03153 - 1.4.3.19 5.458e-210 655.0
DPH1_k127_2572798_10 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000000000000000000000000000000000001227 179.0
DPH1_k127_2572798_2 TYPE 4 fimbrial BIOGENESIS K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 538.0
DPH1_k127_2572798_3 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 497.0
DPH1_k127_2572798_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 454.0
DPH1_k127_2572798_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 426.0
DPH1_k127_2572798_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 398.0
DPH1_k127_2572798_7 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009864 267.0
DPH1_k127_2572798_8 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000000000000000000000000000000000000000003735 233.0
DPH1_k127_2572798_9 Pilus assembly protein PilX - - - 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
DPH1_k127_2678287_0 Enoyl-CoA hydratase isomerase K19640 - - 2.24e-271 837.0
DPH1_k127_2678287_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 281.0
DPH1_k127_2678287_2 pfam pep-cterm - - - 0.0000003604 61.0
DPH1_k127_2684819_0 Fatty acid cis/trans isomerase (CTI) - - - 9.1e-272 856.0
DPH1_k127_2684819_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 1.035e-196 616.0
DPH1_k127_2684819_2 Saccharopine dehydrogenase K03340 - 1.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 554.0
DPH1_k127_2684819_3 Fungal family of unknown function (DUF1776) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 418.0
DPH1_k127_2684819_4 Protein of unknown function (DUF504) - - - 0.000000000000000000000000000000000000000000000000000001567 192.0
DPH1_k127_2684819_5 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000002793 90.0
DPH1_k127_2684819_6 Peptidase family M28 - - - 0.000002018 52.0
DPH1_k127_2782581_0 Protein of unknown function (DUF3570) - - - 0.0 1439.0
DPH1_k127_2782581_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 505.0
DPH1_k127_2782581_2 Redoxin domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 292.0
DPH1_k127_2782581_3 Domain of unknown function (DUF4266) - - - 0.00000000000000000000000000003358 117.0
DPH1_k127_2836701_0 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.0 1045.0
DPH1_k127_2836701_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.209e-320 981.0
DPH1_k127_2836701_10 Belongs to the flagella basal body rod proteins family K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 447.0
DPH1_k127_2836701_11 Belongs to the flagella basal body rod proteins family K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 442.0
DPH1_k127_2836701_12 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 429.0
DPH1_k127_2836701_13 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 427.0
DPH1_k127_2836701_14 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 425.0
DPH1_k127_2836701_15 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 412.0
DPH1_k127_2836701_16 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 370.0
DPH1_k127_2836701_17 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 373.0
DPH1_k127_2836701_18 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002541 259.0
DPH1_k127_2836701_19 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004835 247.0
DPH1_k127_2836701_2 Belongs to the GARS family K01945 - 6.3.4.13 4.382e-267 826.0
DPH1_k127_2836701_20 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000000000000000000000000000001707 228.0
DPH1_k127_2836701_21 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000000000000000000008165 156.0
DPH1_k127_2836701_22 - - - - 0.0000000000000000000000000000000000000005419 148.0
DPH1_k127_2836701_23 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000002787 147.0
DPH1_k127_2836701_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 3.441e-234 727.0
DPH1_k127_2836701_4 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 4.423e-218 679.0
DPH1_k127_2836701_5 Bacterial flagellin N-terminal helical region K02397 - - 1.553e-208 653.0
DPH1_k127_2836701_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 3.448e-208 648.0
DPH1_k127_2836701_7 Rod binding protein K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 596.0
DPH1_k127_2836701_8 Flagellar basal body rod protein K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 547.0
DPH1_k127_2836701_9 Beta-lactamase enzyme family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 501.0
DPH1_k127_2912202_0 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 543.0
DPH1_k127_2912202_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 397.0
DPH1_k127_2912202_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 312.0
DPH1_k127_2916759_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0 1012.0
DPH1_k127_2916759_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.026e-270 833.0
DPH1_k127_2916759_2 Zinc-binding dehydrogenase K12957,K13979 - - 1.275e-214 667.0
DPH1_k127_2916759_3 Bacterial extracellular solute-binding protein K02012 - - 3.338e-209 651.0
DPH1_k127_2916759_4 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 3.69e-207 647.0
DPH1_k127_2916759_5 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 420.0
DPH1_k127_2916759_6 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 400.0
DPH1_k127_2916759_7 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000004964 229.0
DPH1_k127_2916759_8 Cupin domain K11312 - - 0.00000000000000000000000000000000000000000000000000000000000973 208.0
DPH1_k127_2916759_9 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000002924 149.0
DPH1_k127_3176165_0 helicase superfamily c-terminal domain K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 4.448e-266 822.0
DPH1_k127_3176165_1 Pfam:Methyltransf_26 - - - 1.651e-222 692.0
DPH1_k127_3176165_2 PFAM Ketopantoate reductase ApbA PanE, C-terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 597.0
DPH1_k127_3176165_3 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 399.0
DPH1_k127_3176165_4 MazG-like family - - - 0.000000000000000000000000000000000000000000000000000003183 191.0
DPH1_k127_3176165_5 - - - - 0.00000000000000000000000000000000000000000156 176.0
DPH1_k127_3176165_6 NAD(P)H-binding K00091 - 1.1.1.219 0.0000000000000000001282 90.0
DPH1_k127_3176165_7 Peptidase M10 serralysin C terminal - - - 0.000000001938 70.0
DPH1_k127_3180772_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.0 2024.0
DPH1_k127_3180772_1 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 9.744e-306 962.0
DPH1_k127_3180772_2 PFAM Peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 522.0
DPH1_k127_3180772_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 357.0
DPH1_k127_3180772_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000000000004296 229.0
DPH1_k127_3180772_5 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0000000255 57.0
DPH1_k127_3182077_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 6.449e-320 981.0
DPH1_k127_3182077_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 1.31e-295 908.0
DPH1_k127_3182077_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.023e-218 679.0
DPH1_k127_3182077_3 AI-2E family transporter - - - 9.467e-214 665.0
DPH1_k127_3182077_4 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 455.0
DPH1_k127_3182077_5 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 438.0
DPH1_k127_3182077_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 397.0
DPH1_k127_3182077_7 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 375.0
DPH1_k127_3182077_8 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000001717 164.0
DPH1_k127_3212611_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01539 - 3.6.3.9 0.0 1358.0
DPH1_k127_3212611_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 6.684e-265 819.0
DPH1_k127_3212611_10 PFAM Integrase, catalytic core K07497 - - 0.0003851 45.0
DPH1_k127_3212611_2 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 1.466e-204 639.0
DPH1_k127_3212611_3 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 421.0
DPH1_k127_3212611_4 NADH ubiquinone oxidoreductase complex i intermediate-associated protein 30 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 343.0
DPH1_k127_3212611_5 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.00000000000000000000000000003526 117.0
DPH1_k127_3212611_6 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.00000000000003974 73.0
DPH1_k127_3212611_8 PFAM Integrase, catalytic core K07497 - - 0.00000000002808 64.0
DPH1_k127_3212611_9 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.00000223 53.0
DPH1_k127_3230556_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.489e-268 828.0
DPH1_k127_3230556_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 557.0
DPH1_k127_3230556_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 534.0
DPH1_k127_3230556_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 335.0
DPH1_k127_3230556_4 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 292.0
DPH1_k127_3230556_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001836 255.0
DPH1_k127_3230556_6 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001607 214.0
DPH1_k127_3230556_7 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.0000000000000000000000000000000000000000000000367 169.0
DPH1_k127_3230556_8 FR47-like protein - - - 0.0000000000000699 71.0
DPH1_k127_3344774_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0 1102.0
DPH1_k127_3344774_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.752e-255 789.0
DPH1_k127_3344774_2 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 9.867e-248 764.0
DPH1_k127_3344774_3 PFAM Sulfotransferase K01014 - 2.8.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 572.0
DPH1_k127_3344774_4 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 539.0
DPH1_k127_3344774_5 PFAM Methionine biosynthesis MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 430.0
DPH1_k127_3344774_6 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
DPH1_k127_3344774_7 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001485 267.0
DPH1_k127_3344774_8 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000002641 127.0
DPH1_k127_3356043_0 von Willebrand factor, type A - - - 0.0 1328.0
DPH1_k127_3356043_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.306e-318 975.0
DPH1_k127_3356043_10 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002672 244.0
DPH1_k127_3356043_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001017 226.0
DPH1_k127_3356043_12 - - - - 0.00000000000000000000000000000000000001491 144.0
DPH1_k127_3356043_13 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.000000000983 62.0
DPH1_k127_3356043_14 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.0000009344 50.0
DPH1_k127_3356043_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.054e-284 877.0
DPH1_k127_3356043_3 Na H antiporter NhaC K03315 - - 2.391e-274 848.0
DPH1_k127_3356043_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 1.048e-233 725.0
DPH1_k127_3356043_5 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 590.0
DPH1_k127_3356043_6 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 545.0
DPH1_k127_3356043_7 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 384.0
DPH1_k127_3356043_8 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009535 267.0
DPH1_k127_3356043_9 ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000002086 250.0
DPH1_k127_3385885_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 581.0
DPH1_k127_3385885_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 436.0
DPH1_k127_3385885_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 359.0
DPH1_k127_3385885_3 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000000000000000000000001163 228.0
DPH1_k127_3385885_4 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000008562 222.0
DPH1_k127_3397104_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2072.0
DPH1_k127_3397104_1 Cytochrome c1 - - - 0.0 1257.0
DPH1_k127_3397104_10 Belongs to the CarA family K01956 - 6.3.5.5 7.419e-247 763.0
DPH1_k127_3397104_11 TIGRFAM phosphate binding protein K02040 - - 5.564e-201 627.0
DPH1_k127_3397104_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 588.0
DPH1_k127_3397104_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 504.0
DPH1_k127_3397104_14 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 460.0
DPH1_k127_3397104_15 Mut7-C ubiquitin K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 454.0
DPH1_k127_3397104_16 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 392.0
DPH1_k127_3397104_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 295.0
DPH1_k127_3397104_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 292.0
DPH1_k127_3397104_19 CRS1_YhbY K07574 - - 0.00000000000000000000000000000000000000000000000000000000002282 207.0
DPH1_k127_3397104_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1242.0
DPH1_k127_3397104_20 PFAM transposase IS3 IS911 family protein K07483 - - 0.00000000000000000000000000000000000000000006864 160.0
DPH1_k127_3397104_21 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000007113 155.0
DPH1_k127_3397104_24 SMART Diguanylate phosphodiesterase - - - 0.0000000000003999 70.0
DPH1_k127_3397104_3 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0 1174.0
DPH1_k127_3397104_4 Belongs to the glutamate synthase family - - - 6.98e-321 983.0
DPH1_k127_3397104_5 TIGRFAM Acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 3.479e-303 934.0
DPH1_k127_3397104_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 4.589e-292 897.0
DPH1_k127_3397104_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 2.8e-282 871.0
DPH1_k127_3397104_8 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 3.85e-280 867.0
DPH1_k127_3397104_9 Cytochrome P450 - - - 2.736e-276 850.0
DPH1_k127_3452844_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0 1237.0
DPH1_k127_3452844_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.64e-299 920.0
DPH1_k127_3452844_2 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 611.0
DPH1_k127_3452844_3 Aconitase C-terminal domain K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 304.0
DPH1_k127_3452844_4 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 256.0
DPH1_k127_3452844_5 - - - - 0.000000000000000002635 89.0
DPH1_k127_3452844_6 - - - - 0.000004884 52.0
DPH1_k127_3510311_0 Acts as a magnesium transporter K06213 - - 1.039e-287 886.0
DPH1_k127_3510311_1 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 576.0
DPH1_k127_3510311_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 352.0
DPH1_k127_3510311_3 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000007102 215.0
DPH1_k127_3510311_4 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.00000000000000001055 82.0
DPH1_k127_3561950_0 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.0 1640.0
DPH1_k127_3561950_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1116.0
DPH1_k127_3561950_10 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000000000000002443 191.0
DPH1_k127_3561950_11 - - - - 0.000000000000000000000000000000000000000001435 156.0
DPH1_k127_3561950_12 Pfam:DUF1049 K08992 - - 0.00000000000000000000000006747 108.0
DPH1_k127_3561950_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.421e-266 825.0
DPH1_k127_3561950_3 DNA recombination-mediator protein A K04096 - - 3.851e-218 679.0
DPH1_k127_3561950_4 Lysin motif - - - 8.419e-211 662.0
DPH1_k127_3561950_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 556.0
DPH1_k127_3561950_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 407.0
DPH1_k127_3561950_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 352.0
DPH1_k127_3561950_8 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 313.0
DPH1_k127_3561950_9 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 294.0
DPH1_k127_3655634_0 PFAM Copper resistance D K07245 - - 0.0 1312.0
DPH1_k127_3655634_1 PFAM aminotransferase, class I K14267 - 2.6.1.17 5.415e-253 781.0
DPH1_k127_3655634_10 - - - - 0.0000000000000000000000000000000000000000000000006961 176.0
DPH1_k127_3655634_11 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000001268 147.0
DPH1_k127_3655634_12 Protein of unknown function (DUF2909) - - - 0.00000000000000000000000004793 108.0
DPH1_k127_3655634_14 DDE superfamily endonuclease - - - 0.0000000000000001651 78.0
DPH1_k127_3655634_15 - - - - 0.00000005289 55.0
DPH1_k127_3655634_2 HI0933-like protein K07007 - - 7.406e-232 721.0
DPH1_k127_3655634_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 578.0
DPH1_k127_3655634_4 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 566.0
DPH1_k127_3655634_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 549.0
DPH1_k127_3655634_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 440.0
DPH1_k127_3655634_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 312.0
DPH1_k127_3655634_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 294.0
DPH1_k127_3655634_9 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000000905 210.0
DPH1_k127_3682203_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1091.0
DPH1_k127_3682203_1 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 3.533e-245 758.0
DPH1_k127_3682203_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.33e-206 642.0
DPH1_k127_3682203_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 566.0
DPH1_k127_3682203_4 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 547.0
DPH1_k127_3682203_5 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 350.0
DPH1_k127_3682203_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 343.0
DPH1_k127_3682203_7 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001386 276.0
DPH1_k127_3682203_8 PFAM Cytochrome c, class I K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000005863 190.0
DPH1_k127_3682203_9 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000000000000000000005725 172.0
DPH1_k127_3771945_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 598.0
DPH1_k127_3771945_1 Domain of unknown function (DUF4372) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 445.0
DPH1_k127_3771945_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 320.0
DPH1_k127_3771945_3 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006161 259.0
DPH1_k127_3771945_4 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008478 234.0
DPH1_k127_3771945_5 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
DPH1_k127_3771945_6 addiction module antidote protein HigA K21498 - - 0.00000000000000000009182 89.0
DPH1_k127_3771945_7 transposase activity - - - 0.000000000000000358 90.0
DPH1_k127_3838465_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1705.0
DPH1_k127_3838465_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1461.0
DPH1_k127_3838465_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0 1132.0
DPH1_k127_3838465_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 469.0
DPH1_k127_3838465_4 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 434.0
DPH1_k127_3842907_0 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 500.0
DPH1_k127_3842907_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 451.0
DPH1_k127_3842907_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
DPH1_k127_3949609_0 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1324.0
DPH1_k127_3949609_1 Glucose / Sorbosone dehydrogenase K21430 - - 1.927e-239 743.0
DPH1_k127_3949609_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.698e-237 736.0
DPH1_k127_3949609_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 488.0
DPH1_k127_3949609_4 RES - - - 0.0000000000000008464 78.0
DPH1_k127_3949609_7 PFAM Integrase, catalytic core K07497 - - 0.0002427 46.0
DPH1_k127_3977993_0 Domain of Unknown Function (DUF748) - - - 0.0 1817.0
DPH1_k127_3977993_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1115.0
DPH1_k127_3977993_10 PFAM Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 477.0
DPH1_k127_3977993_11 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 474.0
DPH1_k127_3977993_12 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 439.0
DPH1_k127_3977993_13 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 310.0
DPH1_k127_3977993_14 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 298.0
DPH1_k127_3977993_15 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 297.0
DPH1_k127_3977993_16 Protein of unknown function (DUF454) K09790 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 281.0
DPH1_k127_3977993_17 Histidine triad (HIT) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 280.0
DPH1_k127_3977993_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000011 238.0
DPH1_k127_3977993_19 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000000000000000000000000000003243 185.0
DPH1_k127_3977993_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.072e-309 951.0
DPH1_k127_3977993_20 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000004914 189.0
DPH1_k127_3977993_3 Domain of unknown function (DUF4139) - - - 3.759e-290 893.0
DPH1_k127_3977993_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 3.428e-269 833.0
DPH1_k127_3977993_5 PFAM Aminotransferase, class V K04487 - 2.8.1.7 1.449e-229 713.0
DPH1_k127_3977993_6 response regulator containing a CheY-like receiver - - - 6.514e-220 685.0
DPH1_k127_3977993_7 fatty acid desaturase - - - 6.561e-219 680.0
DPH1_k127_3977993_8 VanZ like family - - - 5.943e-194 608.0
DPH1_k127_3977993_9 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 573.0
DPH1_k127_4056405_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1621.0
DPH1_k127_4056405_1 NlpB/DapX lipoprotein K07287 - - 4.877e-229 711.0
DPH1_k127_4056405_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 579.0
DPH1_k127_4056405_3 SMART Diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001367 210.0
DPH1_k127_4068774_0 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1474.0
DPH1_k127_4068774_1 Belongs to the GSP D family K02666 - - 0.0 1208.0
DPH1_k127_4068774_10 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 472.0
DPH1_k127_4068774_11 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
DPH1_k127_4068774_12 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 432.0
DPH1_k127_4068774_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 430.0
DPH1_k127_4068774_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 430.0
DPH1_k127_4068774_15 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 394.0
DPH1_k127_4068774_16 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 375.0
DPH1_k127_4068774_17 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 377.0
DPH1_k127_4068774_18 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 376.0
DPH1_k127_4068774_19 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 372.0
DPH1_k127_4068774_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.854e-267 824.0
DPH1_k127_4068774_20 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008547 355.0
DPH1_k127_4068774_21 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 341.0
DPH1_k127_4068774_22 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 339.0
DPH1_k127_4068774_23 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 332.0
DPH1_k127_4068774_24 PFAM Fimbrial assembly K02663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 326.0
DPH1_k127_4068774_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 309.0
DPH1_k127_4068774_26 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 291.0
DPH1_k127_4068774_27 PFAM Pilus assembly protein K02665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 291.0
DPH1_k127_4068774_28 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006608 246.0
DPH1_k127_4068774_29 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005325 241.0
DPH1_k127_4068774_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 5.475e-222 690.0
DPH1_k127_4068774_30 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000005349 228.0
DPH1_k127_4068774_31 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
DPH1_k127_4068774_32 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000008754 225.0
DPH1_k127_4068774_33 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000004218 225.0
DPH1_k127_4068774_34 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000000000000000000000000481 211.0
DPH1_k127_4068774_35 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
DPH1_k127_4068774_36 - - - - 0.00000000000000000000000000000000000000000000000000000000001138 208.0
DPH1_k127_4068774_37 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000001951 203.0
DPH1_k127_4068774_38 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
DPH1_k127_4068774_39 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000000002071 188.0
DPH1_k127_4068774_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 7.915e-210 656.0
DPH1_k127_4068774_40 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000001034 186.0
DPH1_k127_4068774_41 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000000004637 174.0
DPH1_k127_4068774_42 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000004981 175.0
DPH1_k127_4068774_43 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000000000318 158.0
DPH1_k127_4068774_44 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000000664 151.0
DPH1_k127_4068774_45 Domain of unknown function (DUF4177) - - - 0.00000000000000000000000000000000000001705 143.0
DPH1_k127_4068774_46 Ribosomal protein L30 K02907 - - 0.0000000000000000000000003802 106.0
DPH1_k127_4068774_47 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005157 80.0
DPH1_k127_4068774_48 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000001141 81.0
DPH1_k127_4068774_49 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000001341 79.0
DPH1_k127_4068774_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 1.061e-208 649.0
DPH1_k127_4068774_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 7.045e-206 642.0
DPH1_k127_4068774_7 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 5.171e-195 610.0
DPH1_k127_4068774_8 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 583.0
DPH1_k127_4068774_9 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 541.0
DPH1_k127_4095987_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1159.0
DPH1_k127_4095987_1 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 1.509e-317 972.0
DPH1_k127_4095987_2 4Fe-4S double cluster binding domain K11473 - - 4.429e-259 799.0
DPH1_k127_4095987_3 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 1.566e-220 687.0
DPH1_k127_4095987_4 FAD linked oxidase K00104,K11472 - 1.1.3.15 7.792e-199 623.0
DPH1_k127_4095987_5 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 567.0
DPH1_k127_4095987_6 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 565.0
DPH1_k127_4095987_7 PFAM 6-phosphogluconate dehydrogenase, NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 556.0
DPH1_k127_4095987_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 478.0
DPH1_k127_4095987_9 PFAM Transposase, IS4-like - - - 0.0000000000000000000000000000000000000000000000000000003324 193.0
DPH1_k127_4098585_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 2299.0
DPH1_k127_4098585_1 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.0 1162.0
DPH1_k127_4098585_10 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 518.0
DPH1_k127_4098585_11 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 494.0
DPH1_k127_4098585_12 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 477.0
DPH1_k127_4098585_13 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 426.0
DPH1_k127_4098585_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 347.0
DPH1_k127_4098585_15 Predicted small integral membrane protein (DUF2165) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 310.0
DPH1_k127_4098585_16 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003087 275.0
DPH1_k127_4098585_17 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007538 261.0
DPH1_k127_4098585_18 Protein of unknown function (DUF3293) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009511 249.0
DPH1_k127_4098585_19 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000000000000000000000023 201.0
DPH1_k127_4098585_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 3.008e-289 889.0
DPH1_k127_4098585_20 - - - - 0.000000000000000000000000000000000000000000004228 163.0
DPH1_k127_4098585_22 - - - - 0.0000000000000000000000002681 105.0
DPH1_k127_4098585_24 TIR domain - - - 0.000001888 50.0
DPH1_k127_4098585_25 TIR domain - - - 0.00000234 50.0
DPH1_k127_4098585_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 4.587e-268 826.0
DPH1_k127_4098585_4 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 2.008e-224 698.0
DPH1_k127_4098585_5 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 2.869e-202 631.0
DPH1_k127_4098585_6 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 2.256e-196 613.0
DPH1_k127_4098585_7 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 1.455e-195 612.0
DPH1_k127_4098585_8 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 596.0
DPH1_k127_4098585_9 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 536.0
DPH1_k127_4122076_0 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 491.0
DPH1_k127_4122076_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 424.0
DPH1_k127_4122076_2 'signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
DPH1_k127_4122076_3 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000002477 63.0
DPH1_k127_4122076_4 ISXO2-like transposase domain - - - 0.0000002499 53.0
DPH1_k127_4165245_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1750.0
DPH1_k127_4165245_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1440.0
DPH1_k127_4165245_10 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001365 221.0
DPH1_k127_4165245_11 Dodecin K09165 - - 0.00000000000000000000000000000000004084 134.0
DPH1_k127_4165245_12 Protein of unknown function (DUF3622) - - - 0.00000000000000000000000000001736 119.0
DPH1_k127_4165245_2 Bacterial protein of unknown function (DUF853) K06915 - - 6.471e-304 934.0
DPH1_k127_4165245_3 DNA polymerase III (Delta subunit) K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 605.0
DPH1_k127_4165245_4 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 599.0
DPH1_k127_4165245_5 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 564.0
DPH1_k127_4165245_6 PFAM Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 458.0
DPH1_k127_4165245_7 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 275.0
DPH1_k127_4165245_8 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004252 250.0
DPH1_k127_4165245_9 ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000003222 224.0
DPH1_k127_4264154_0 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 8.546e-257 793.0
DPH1_k127_4264154_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 7.763e-207 645.0
DPH1_k127_4264154_2 protein conserved in bacteria K09941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 329.0
DPH1_k127_4264154_3 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 284.0
DPH1_k127_4264154_4 RF-1 domain K15034 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
DPH1_k127_4264154_5 nitroreductase - - - 0.000000000000000000000007244 100.0
DPH1_k127_4331303_0 - - - - 0.0 1084.0
DPH1_k127_4331303_1 TonB-dependent receptor K16090 - - 2.339e-316 976.0
DPH1_k127_4424453_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0 1261.0
DPH1_k127_4424453_1 Belongs to the GSP D family K02453 - - 0.0 1124.0
DPH1_k127_4424453_10 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 442.0
DPH1_k127_4424453_11 carbon utilization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 347.0
DPH1_k127_4424453_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 327.0
DPH1_k127_4424453_13 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 310.0
DPH1_k127_4424453_14 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
DPH1_k127_4424453_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 302.0
DPH1_k127_4424453_16 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 285.0
DPH1_k127_4424453_17 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 284.0
DPH1_k127_4424453_18 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000001581 142.0
DPH1_k127_4424453_19 Histidine kinase - - - 0.0000000000000000001223 90.0
DPH1_k127_4424453_2 type II secretion system protein E K02454 - - 0.0 1083.0
DPH1_k127_4424453_3 SMART ATPase, AAA type, core K06148 - - 0.0 1033.0
DPH1_k127_4424453_4 modulator of DNA gyrase K03592 - - 1.29e-283 873.0
DPH1_k127_4424453_5 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 6.192e-282 869.0
DPH1_k127_4424453_6 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 8.126e-249 770.0
DPH1_k127_4424453_7 Type II secretion system K02455 - - 3.104e-245 758.0
DPH1_k127_4424453_8 - - - - 3.109e-196 616.0
DPH1_k127_4424453_9 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 515.0
DPH1_k127_4491023_0 Signal transduction histidine kinase K07636 - 2.7.13.3 3.195e-266 821.0
DPH1_k127_4491023_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 490.0
DPH1_k127_4491023_2 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
DPH1_k127_4491023_3 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002398 277.0
DPH1_k127_4491023_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000005793 230.0
DPH1_k127_4491023_5 HTH-like domain K07497 - - 0.00000000000000000000000000000000000000000000000000004304 188.0
DPH1_k127_4491023_6 transposase activity - - - 0.0000000000000000000000009654 103.0
DPH1_k127_4491023_7 PFAM Integrase, catalytic core K07497 - - 0.000000000000000006512 82.0
DPH1_k127_4491023_8 Diguanylate cyclase - - - 0.00000000000001338 74.0
DPH1_k127_4493489_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 4.393e-302 929.0
DPH1_k127_4493489_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.501e-293 900.0
DPH1_k127_4493489_10 - - - - 0.0000000000000000000000006179 104.0
DPH1_k127_4493489_11 PFAM plasmid - - - 0.0000000000000001835 80.0
DPH1_k127_4493489_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.962e-263 811.0
DPH1_k127_4493489_3 Peptidoglycan polymerase that is essential for cell division K03588 - - 6.843e-232 719.0
DPH1_k127_4493489_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 1.166e-230 716.0
DPH1_k127_4493489_5 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 580.0
DPH1_k127_4493489_6 ABC transporter K06020 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 530.0
DPH1_k127_4493489_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 505.0
DPH1_k127_4493489_8 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 453.0
DPH1_k127_4493489_9 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000006271 155.0
DPH1_k127_4529856_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 2083.0
DPH1_k127_4529856_1 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 419.0
DPH1_k127_4549394_0 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.0 2378.0
DPH1_k127_4549394_1 PFAM chemotaxis K02660 - - 0.0 1197.0
DPH1_k127_4549394_2 ABC transporter K06147 - - 0.0 1074.0
DPH1_k127_4549394_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.0 999.0
DPH1_k127_4549394_4 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 291.0
DPH1_k127_4564093_0 Alginate export - - - 0.0 1028.0
DPH1_k127_4564093_1 PFAM amidohydrolase - - - 1.978e-231 725.0
DPH1_k127_4564093_10 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006808 243.0
DPH1_k127_4564093_11 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000006346 169.0
DPH1_k127_4564093_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 3.041e-227 706.0
DPH1_k127_4564093_3 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 546.0
DPH1_k127_4564093_4 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 500.0
DPH1_k127_4564093_5 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 484.0
DPH1_k127_4564093_6 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 428.0
DPH1_k127_4564093_7 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 341.0
DPH1_k127_4564093_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 306.0
DPH1_k127_4564093_9 Restriction endonuclease K07448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 314.0
DPH1_k127_4611712_0 Signal transduction histidine kinase, phosphotransfer (Hpt) - - - 0.0 1024.0
DPH1_k127_4611712_1 7 transmembrane helices usually fused to an inactive transglutaminase - - - 2.149e-306 942.0
DPH1_k127_4611712_10 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 1.64e-200 628.0
DPH1_k127_4611712_11 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 543.0
DPH1_k127_4611712_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 510.0
DPH1_k127_4611712_13 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 501.0
DPH1_k127_4611712_14 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 497.0
DPH1_k127_4611712_15 PFAM Type IV pilus assembly PilZ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 493.0
DPH1_k127_4611712_16 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 456.0
DPH1_k127_4611712_17 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 439.0
DPH1_k127_4611712_18 PFAM Glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 386.0
DPH1_k127_4611712_19 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007531 359.0
DPH1_k127_4611712_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 1.147e-305 938.0
DPH1_k127_4611712_20 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 291.0
DPH1_k127_4611712_21 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 291.0
DPH1_k127_4611712_22 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003874 271.0
DPH1_k127_4611712_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002236 245.0
DPH1_k127_4611712_24 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
DPH1_k127_4611712_25 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000000000000001376 196.0
DPH1_k127_4611712_26 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000000000000000000000000000000000000000003039 190.0
DPH1_k127_4611712_27 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000000000001338 189.0
DPH1_k127_4611712_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.251e-292 899.0
DPH1_k127_4611712_4 decarboxylase - - - 4.556e-285 877.0
DPH1_k127_4611712_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 4.077e-275 849.0
DPH1_k127_4611712_6 - - - - 2.749e-238 739.0
DPH1_k127_4611712_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 3.971e-214 668.0
DPH1_k127_4611712_8 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 2.178e-203 634.0
DPH1_k127_4611712_9 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 8.968e-202 630.0
DPH1_k127_4629866_0 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 0.0 1713.0
DPH1_k127_4629866_1 Competence protein ComEC Rec2 K02238 - - 0.0 1432.0
DPH1_k127_4629866_2 His Kinase A (phosphoacceptor) domain - - - 1.242e-282 871.0
DPH1_k127_4629866_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002908 250.0
DPH1_k127_4629866_4 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000001586 120.0
DPH1_k127_4629866_5 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000001317 99.0
DPH1_k127_4701904_0 Biotin lipoyl attachment K01941 - 6.3.4.6 0.0 2344.0
DPH1_k127_4701904_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1842.0
DPH1_k127_4701904_10 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 3.441e-197 616.0
DPH1_k127_4701904_11 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 606.0
DPH1_k127_4701904_12 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 595.0
DPH1_k127_4701904_13 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 585.0
DPH1_k127_4701904_14 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 514.0
DPH1_k127_4701904_15 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 486.0
DPH1_k127_4701904_16 UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 444.0
DPH1_k127_4701904_17 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 443.0
DPH1_k127_4701904_18 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 414.0
DPH1_k127_4701904_19 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 363.0
DPH1_k127_4701904_2 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1816.0
DPH1_k127_4701904_20 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 323.0
DPH1_k127_4701904_21 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 314.0
DPH1_k127_4701904_22 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 301.0
DPH1_k127_4701904_23 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 282.0
DPH1_k127_4701904_24 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 273.0
DPH1_k127_4701904_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003255 269.0
DPH1_k127_4701904_26 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000000000000000000003173 172.0
DPH1_k127_4701904_27 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000004765 161.0
DPH1_k127_4701904_28 - - - - 0.00000000000000000000003002 100.0
DPH1_k127_4701904_3 CoA binding domain K09181 - - 0.0 1710.0
DPH1_k127_4701904_30 DDE superfamily endonuclease - - - 0.00000000000000000001387 91.0
DPH1_k127_4701904_31 Domain of unknown function (DUF1989) K09967 - - 0.0000000000004907 68.0
DPH1_k127_4701904_32 - - - - 0.0000000001061 62.0
DPH1_k127_4701904_33 - - - - 0.000008247 51.0
DPH1_k127_4701904_4 extracellular solute-binding protein, family 5 - - - 0.0 1422.0
DPH1_k127_4701904_5 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0 1138.0
DPH1_k127_4701904_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.228e-293 902.0
DPH1_k127_4701904_7 L-serine dehydratase single chain form K01752 - 4.3.1.17 9.198e-292 897.0
DPH1_k127_4701904_8 Protein of unknown function (DUF3422) - - - 1.363e-274 847.0
DPH1_k127_4701904_9 Peptidase family M23 - - - 9.237e-226 704.0
DPH1_k127_47268_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 435.0
DPH1_k127_47268_2 Protein of unknown function DUF86 - - - 0.000000000000000000000000000001915 126.0
DPH1_k127_47268_3 nucleotidyltransferase activity - - - 0.0000000000000006559 81.0
DPH1_k127_47268_4 Nucleotidyltransferase domain - - - 0.00002199 52.0
DPH1_k127_47268_5 Transposase IS200 like - - - 0.0001959 44.0
DPH1_k127_482278_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 493.0
DPH1_k127_482278_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 469.0
DPH1_k127_482278_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 411.0
DPH1_k127_482278_3 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 384.0
DPH1_k127_482278_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 288.0
DPH1_k127_482278_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003142 269.0
DPH1_k127_482278_6 PFAM Transposase, IS4-like - - - 0.000000000003538 66.0
DPH1_k127_482278_7 PFAM Transposase, IS4-like - - - 0.000000001085 59.0
DPH1_k127_482278_8 PFAM Filamentation induced by cAMP death on - - - 0.0000002692 53.0
DPH1_k127_4920255_0 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 1.144e-228 710.0
DPH1_k127_4920255_1 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 538.0
DPH1_k127_4925546_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 567.0
DPH1_k127_4925546_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 307.0
DPH1_k127_4925546_2 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001403 273.0
DPH1_k127_4958408_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1349.0
DPH1_k127_4958408_1 Signal transduction histidine kinase - - - 0.0 1329.0
DPH1_k127_4958408_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.088e-301 926.0
DPH1_k127_4958408_3 Sigma-54 interaction domain - - - 6.48e-261 805.0
DPH1_k127_4958408_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.113e-254 787.0
DPH1_k127_4958408_5 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.293e-246 763.0
DPH1_k127_4958408_6 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 2.069e-229 710.0
DPH1_k127_4958408_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.543e-215 670.0
DPH1_k127_4958408_8 Domain of unknown function (DUF4357) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 375.0
DPH1_k127_4958408_9 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
DPH1_k127_5138476_0 PFAM Peptidase S45, penicillin amidase K01434 - 3.5.1.11 0.0 1431.0
DPH1_k127_5138476_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1283.0
DPH1_k127_5138476_2 signal recognition particle SRP54 K02404 - - 2.095e-242 752.0
DPH1_k127_5138476_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 4.46e-217 677.0
DPH1_k127_5138476_4 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000004353 173.0
DPH1_k127_5313781_0 Peptidase dimerisation domain - - - 1.932e-255 788.0
DPH1_k127_5313781_1 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 309.0
DPH1_k127_5313781_2 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000000000000000000000000000000000000000000009679 184.0
DPH1_k127_5313781_3 Antitoxin component of a toxin-antitoxin (TA) module K18923 - - 0.0000000000000000000003745 98.0
DPH1_k127_5314686_0 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 605.0
DPH1_k127_5314686_1 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001522 252.0
DPH1_k127_5364412_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1495.0
DPH1_k127_5364412_1 Bacterial regulatory helix-turn-helix protein, lysR family K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 564.0
DPH1_k127_5364412_2 PFAM TENA THI-4 protein Coenzyme PQQ biosynthesis protein C K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 494.0
DPH1_k127_5364412_3 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 291.0
DPH1_k127_5364412_4 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002188 275.0
DPH1_k127_5364412_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000004736 228.0
DPH1_k127_5364412_6 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000000000003936 214.0
DPH1_k127_5364412_7 SIR2-like domain - - - 0.00000000000000000000000000000000000000000001748 163.0
DPH1_k127_5364412_8 NAD+ binding - - - 0.000000131 54.0
DPH1_k127_5376350_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1285.0
DPH1_k127_5376350_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0 1119.0
DPH1_k127_5376350_10 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 519.0
DPH1_k127_5376350_11 membrane K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 497.0
DPH1_k127_5376350_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 365.0
DPH1_k127_5376350_13 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 356.0
DPH1_k127_5376350_14 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
DPH1_k127_5376350_15 - - - - 0.000000000000000000000000000000000000000000000000000000001782 202.0
DPH1_k127_5376350_16 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000000000000004097 169.0
DPH1_k127_5376350_17 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000004835 164.0
DPH1_k127_5376350_2 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0 994.0
DPH1_k127_5376350_3 argininosuccinate lyase K01755 - 4.3.2.1 5.992e-298 919.0
DPH1_k127_5376350_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.343e-265 819.0
DPH1_k127_5376350_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.235e-250 775.0
DPH1_k127_5376350_6 diguanylate cyclase K02488 - 2.7.7.65 1.225e-237 738.0
DPH1_k127_5376350_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 574.0
DPH1_k127_5376350_8 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 542.0
DPH1_k127_5376350_9 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 533.0
DPH1_k127_5401847_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1169.0
DPH1_k127_5401847_1 DNA polymerase III K01141 - 3.1.11.1 3.568e-285 878.0
DPH1_k127_5401847_10 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 260.0
DPH1_k127_5401847_11 PFAM type II secretion system protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002392 239.0
DPH1_k127_5401847_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000000000000000002786 213.0
DPH1_k127_5401847_13 Belongs to the GSP D family K02453 - - 0.00000000000000000000000000000009383 124.0
DPH1_k127_5401847_14 DDE superfamily endonuclease - - - 0.000000000000000000000000005997 111.0
DPH1_k127_5401847_15 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000006658 111.0
DPH1_k127_5401847_16 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000001581 83.0
DPH1_k127_5401847_17 DDE superfamily endonuclease - - - 0.00000000002511 64.0
DPH1_k127_5401847_18 Winged helix-turn helix - - - 0.0002036 47.0
DPH1_k127_5401847_2 TIGRFAM Type I secretion membrane fusion protein, HlyD K02022,K12537,K12542 - - 3.489e-268 828.0
DPH1_k127_5401847_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 4.664e-260 805.0
DPH1_k127_5401847_4 TIGRFAM type I secretion outer membrane protein, TolC K12538 - - 5.082e-260 804.0
DPH1_k127_5401847_5 ABC transporter transmembrane region K12536 - - 3.276e-239 741.0
DPH1_k127_5401847_6 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 380.0
DPH1_k127_5401847_8 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 316.0
DPH1_k127_5401847_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005382 271.0
DPH1_k127_5475172_0 MacB-like periplasmic core domain K02004 - - 7.084e-234 726.0
DPH1_k127_5475172_1 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 577.0
DPH1_k127_5475172_2 - - - - 0.0000000000000000000000001738 106.0
DPH1_k127_5475172_3 ABC transporter K02003 - - 0.000000000000001455 76.0
DPH1_k127_5496586_0 50S ribosome-binding GTPase K06946 - - 4.539e-304 935.0
DPH1_k127_5496586_1 Putative peptidoglycan binding domain K21470 - - 1.413e-297 919.0
DPH1_k127_5496586_2 PFAM Peptidase M18 K01267 - 3.4.11.21 5.679e-259 800.0
DPH1_k127_5496586_3 Domain of unknown function (DUF697) - - - 2.475e-248 768.0
DPH1_k127_5496586_4 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000002531 162.0
DPH1_k127_5546921_0 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.0 1306.0
DPH1_k127_5546921_1 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 - - 0.0 1034.0
DPH1_k127_5546921_2 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 474.0
DPH1_k127_5546921_3 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 320.0
DPH1_k127_5546921_4 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000346 250.0
DPH1_k127_5546921_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000004557 184.0
DPH1_k127_5546921_6 - - - - 0.000000000000000000000000000000000000001146 150.0
DPH1_k127_5546921_7 ABC transporter K02003 - - 0.000000000000000000002876 93.0
DPH1_k127_5546921_8 TIGRFAM methyltransferase FkbM family - - - 0.000000000000003592 78.0
DPH1_k127_5576232_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 483.0
DPH1_k127_5576232_1 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 479.0
DPH1_k127_5576232_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 465.0
DPH1_k127_5576232_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 461.0
DPH1_k127_5576232_4 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 458.0
DPH1_k127_5576232_5 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 427.0
DPH1_k127_5576232_6 FlgN protein K02399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002064 267.0
DPH1_k127_5576232_7 PFAM Anti-sigma-28 factor, FlgM K02398 - - 0.00000000000000000000000000000000000000000000000000006674 187.0
DPH1_k127_575089_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.902e-316 969.0
DPH1_k127_575089_1 PFAM Metal-dependent hydrolase HDOD - - - 3.754e-296 914.0
DPH1_k127_575089_2 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
DPH1_k127_575089_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 384.0
DPH1_k127_575089_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 304.0
DPH1_k127_575089_5 PFAM Helix-turn-helix type 3 - - - 0.0000000000000000000000000000000000000000000000000000002588 195.0
DPH1_k127_575089_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000006109 137.0
DPH1_k127_575089_7 Helix-turn-helix domain K07726 - - 0.00000000000000000000000000000007985 127.0
DPH1_k127_575089_8 PFAM Plasmid stabilisation system K06218 - - 0.0000000000002456 69.0
DPH1_k127_5793333_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1967.0
DPH1_k127_5793333_1 PFAM Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.0 1632.0
DPH1_k127_5793333_10 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 476.0
DPH1_k127_5793333_11 Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 454.0
DPH1_k127_5793333_12 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 368.0
DPH1_k127_5793333_13 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 355.0
DPH1_k127_5793333_14 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 322.0
DPH1_k127_5793333_15 Protein of unknown function (DUF4019) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006015 250.0
DPH1_k127_5793333_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000009099 211.0
DPH1_k127_5793333_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000003621 146.0
DPH1_k127_5793333_18 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000000001548 129.0
DPH1_k127_5793333_19 Ankyrin repeat K06867 - - 0.000000000000000000000000007031 109.0
DPH1_k127_5793333_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 8.178e-265 821.0
DPH1_k127_5793333_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 6.48e-261 805.0
DPH1_k127_5793333_4 outer membrane efflux protein K15725 - - 1.383e-236 740.0
DPH1_k127_5793333_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 1.43e-214 668.0
DPH1_k127_5793333_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 2.484e-204 636.0
DPH1_k127_5793333_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 1.671e-195 612.0
DPH1_k127_5793333_8 malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 554.0
DPH1_k127_5793333_9 PFAM Zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
DPH1_k127_5838048_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1172.0
DPH1_k127_5838048_1 SMART Diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 466.0
DPH1_k127_5838048_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 372.0
DPH1_k127_5981280_0 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 576.0
DPH1_k127_5981280_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 575.0
DPH1_k127_5981280_10 signal sequence binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003344 268.0
DPH1_k127_5981280_11 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.00000000000000000000000000000000000000000004641 160.0
DPH1_k127_5981280_12 Protein of unknown function (DUF2970) - - - 0.0000000000000000000003886 96.0
DPH1_k127_5981280_2 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 574.0
DPH1_k127_5981280_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 473.0
DPH1_k127_5981280_4 FAD linked oxidases, C-terminal domain K00102,K03777 - 1.1.2.4,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 469.0
DPH1_k127_5981280_5 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 413.0
DPH1_k127_5981280_6 FAD linked oxidases, C-terminal domain K00102,K03777 - 1.1.2.4,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 387.0
DPH1_k127_5981280_7 Plasmid pRiA4b ORF-3-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 383.0
DPH1_k127_5981280_8 transport-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 345.0
DPH1_k127_5981280_9 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 318.0
DPH1_k127_6138330_0 Hydrogenase formation hypA family K04654 - - 4.924e-243 751.0
DPH1_k127_6138330_1 AIR synthase related protein, N-terminal domain K04655 - - 2.824e-219 682.0
DPH1_k127_6138330_2 L,D-transpeptidase catalytic domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 608.0
DPH1_k127_6138330_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 353.0
DPH1_k127_6138330_4 Belongs to the enoyl-CoA hydratase isomerase family K19640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001291 242.0
DPH1_k127_6138330_5 Alanine-zipper, major outer membrane lipoprotein K06078 - - 0.00000000000000000000000000000000000000003851 154.0
DPH1_k127_6138330_6 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000000002331 130.0
DPH1_k127_6343825_0 PFAM Major facilitator superfamily MFS-1 - - - 7.453e-253 783.0
DPH1_k127_6343825_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 573.0
DPH1_k127_6343825_2 Glutathione S-transferase, N-terminal domain K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000001572 201.0
DPH1_k127_6349500_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1146.0
DPH1_k127_6349500_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 2.358e-289 891.0
DPH1_k127_6349500_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000003951 202.0
DPH1_k127_6349500_3 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000000005385 104.0
DPH1_k127_6359933_0 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 0.0 1210.0
DPH1_k127_6359933_1 Tetratricopeptide repeat - - - 0.0 1080.0
DPH1_k127_6359933_10 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 413.0
DPH1_k127_6359933_11 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 394.0
DPH1_k127_6359933_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 390.0
DPH1_k127_6359933_13 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 361.0
DPH1_k127_6359933_14 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000000000000001214 172.0
DPH1_k127_6359933_15 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000004158 143.0
DPH1_k127_6359933_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.3e-322 989.0
DPH1_k127_6359933_3 Glycyl-tRNA synthetase K01878 - 6.1.1.14 4.751e-203 632.0
DPH1_k127_6359933_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 8.366e-197 614.0
DPH1_k127_6359933_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 8.187e-194 606.0
DPH1_k127_6359933_6 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 537.0
DPH1_k127_6359933_7 Belongs to the ParA family K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 520.0
DPH1_k127_6359933_8 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 490.0
DPH1_k127_6359933_9 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 467.0
DPH1_k127_638512_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 2271.0
DPH1_k127_638512_1 Peptidase family U32 C-terminal domain K08303 - - 1.268e-275 850.0
DPH1_k127_638512_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 1.726e-230 717.0
DPH1_k127_638512_3 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 3.644e-228 708.0
DPH1_k127_638512_4 PFAM alpha beta hydrolase K07019 - - 1.024e-212 662.0
DPH1_k127_638512_5 dehydrogenase, E1 component K00164 - 1.2.4.2 1.558e-197 616.0
DPH1_k127_638512_6 Binding-protein-dependent transport system inner membrane component K02054,K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 516.0
DPH1_k127_638512_7 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 480.0
DPH1_k127_638512_8 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 386.0
DPH1_k127_638512_9 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000001308 218.0
DPH1_k127_640855_0 Lipase (class 3) - - - 3.597e-238 739.0
DPH1_k127_640855_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 533.0
DPH1_k127_640855_2 PFAM UPF0103 Mediator of ErbB2-driven cell motility K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 492.0
DPH1_k127_640855_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 437.0
DPH1_k127_640855_4 PFAM AMMECR1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001325 220.0
DPH1_k127_640855_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000001697 111.0
DPH1_k127_6439234_0 DNA helicase K03654 - 3.6.4.12 0.0 1144.0
DPH1_k127_6439234_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 327.0
DPH1_k127_6439234_2 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000002085 238.0
DPH1_k127_6439234_3 - - - - 0.000000000000000000000000000000008453 126.0
DPH1_k127_6667205_0 M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1340.0
DPH1_k127_6667205_1 PFAM Major facilitator superfamily - - - 6.534e-254 786.0
DPH1_k127_6667205_10 Putative transposase - - - 0.000000000003019 67.0
DPH1_k127_6667205_11 Putative transposase - - - 0.0000002493 54.0
DPH1_k127_6667205_2 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 1.717e-222 692.0
DPH1_k127_6667205_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 4.185e-222 691.0
DPH1_k127_6667205_4 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 485.0
DPH1_k127_6667205_5 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 481.0
DPH1_k127_6667205_6 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 413.0
DPH1_k127_6667205_7 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 356.0
DPH1_k127_6667205_8 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000000000002363 177.0
DPH1_k127_6667205_9 Rubredoxin - - - 0.0000000000000008113 77.0
DPH1_k127_6695161_0 Ketoacyl-synthetase C-terminal extension - - - 0.0 5125.0
DPH1_k127_6695161_1 Ketoacyl-synthetase C-terminal extension K15676 - - 0.0 3033.0
DPH1_k127_6695161_10 alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 1.598e-283 872.0
DPH1_k127_6695161_11 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 2.252e-259 803.0
DPH1_k127_6695161_12 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.13e-243 754.0
DPH1_k127_6695161_13 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 1.42e-243 756.0
DPH1_k127_6695161_14 MacB-like periplasmic core domain K02004 - - 4.958e-239 741.0
DPH1_k127_6695161_15 Alpha/beta hydrolase family - - - 4.676e-232 719.0
DPH1_k127_6695161_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.854e-207 648.0
DPH1_k127_6695161_17 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 1.204e-201 627.0
DPH1_k127_6695161_18 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 552.0
DPH1_k127_6695161_19 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 531.0
DPH1_k127_6695161_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1804.0
DPH1_k127_6695161_20 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 467.0
DPH1_k127_6695161_21 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 458.0
DPH1_k127_6695161_22 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 435.0
DPH1_k127_6695161_23 PFAM Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 421.0
DPH1_k127_6695161_24 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 415.0
DPH1_k127_6695161_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 392.0
DPH1_k127_6695161_26 PFAM Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 386.0
DPH1_k127_6695161_27 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 385.0
DPH1_k127_6695161_28 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 299.0
DPH1_k127_6695161_29 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007419 237.0
DPH1_k127_6695161_3 Histidine kinase - - - 0.0 1368.0
DPH1_k127_6695161_30 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000005788 194.0
DPH1_k127_6695161_31 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000000000000000000005107 187.0
DPH1_k127_6695161_32 Zinc-finger domain - - - 0.000000000000000000000000000000000000001052 148.0
DPH1_k127_6695161_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0 1108.0
DPH1_k127_6695161_5 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0 1037.0
DPH1_k127_6695161_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.984e-320 984.0
DPH1_k127_6695161_7 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 4.522e-307 942.0
DPH1_k127_6695161_8 Ribonuclease E/G family K08301 - - 4.004e-298 916.0
DPH1_k127_6695161_9 PFAM Peptidase M48 - - - 3.824e-290 895.0
DPH1_k127_6698356_0 Fungal family of unknown function (DUF1776) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 388.0
DPH1_k127_6698356_1 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 373.0
DPH1_k127_6698356_2 ATPase MipZ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 357.0
DPH1_k127_6698356_3 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000001497 163.0
DPH1_k127_6836978_0 AMP-dependent synthetase K01897 - 6.2.1.3 0.0 1007.0
DPH1_k127_6836978_1 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001208 243.0
DPH1_k127_6836978_2 Helix-hairpin-helix domain - - - 0.00000000000000000000000000000000000001183 149.0
DPH1_k127_686381_0 Polysaccharide biosynthesis protein - - - 0.0 1159.0
DPH1_k127_686381_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 1.655e-321 987.0
DPH1_k127_686381_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.358e-213 672.0
DPH1_k127_686381_3 Glycosyl transferase family 4 K13007 - - 2.254e-204 638.0
DPH1_k127_686381_4 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 464.0
DPH1_k127_686381_5 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 411.0
DPH1_k127_686381_6 PFAM Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000004442 115.0
DPH1_k127_686381_7 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000002422 111.0
DPH1_k127_688231_0 Belongs to the peptidase S16 family - - - 0.0 1165.0
DPH1_k127_688231_1 Heat shock 70 kDa protein K04043 - - 0.0 1035.0
DPH1_k127_688231_2 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 460.0
DPH1_k127_688231_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009678 403.0
DPH1_k127_7079031_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 5.517e-308 945.0
DPH1_k127_7079031_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 292.0
DPH1_k127_7079031_2 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 271.0
DPH1_k127_7079031_3 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000008017 176.0
DPH1_k127_7112156_0 PFAM Phospholipid glycerol acyltransferase - - - 0.0 1143.0
DPH1_k127_7112156_1 SMART ATPase, AAA type, core K01551 - 3.6.3.16 0.0 1079.0
DPH1_k127_7112156_10 Regulatory protein ArsR K03892 - - 0.00000000000000000000000000000000000000000000000000000000287 201.0
DPH1_k127_7112156_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000001995 149.0
DPH1_k127_7112156_12 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000000000000000234 143.0
DPH1_k127_7112156_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000001798 117.0
DPH1_k127_7112156_2 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 2.223e-238 741.0
DPH1_k127_7112156_3 Peptidase M14, carboxypeptidase A - - - 3.684e-217 674.0
DPH1_k127_7112156_4 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 577.0
DPH1_k127_7112156_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 562.0
DPH1_k127_7112156_6 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 501.0
DPH1_k127_7112156_7 PFAM Alpha beta hydrolase fold-1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
DPH1_k127_7112156_8 low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 303.0
DPH1_k127_7112156_9 PFAM Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001675 239.0
DPH1_k127_7132308_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0 1075.0
DPH1_k127_7132308_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 6.035e-266 826.0
DPH1_k127_7132308_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 594.0
DPH1_k127_7132308_3 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 436.0
DPH1_k127_7209667_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1170.0
DPH1_k127_7209667_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1141.0
DPH1_k127_7209667_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 7.442e-294 903.0
DPH1_k127_7209667_3 Glutamate-cysteine ligase K01919 - 6.3.2.2 3.168e-281 865.0
DPH1_k127_7209667_4 Multicopper oxidase K00368,K08100 - 1.3.3.5,1.7.2.1 1.077e-227 707.0
DPH1_k127_7209667_5 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 524.0
DPH1_k127_7209667_6 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 512.0
DPH1_k127_7209667_7 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 346.0
DPH1_k127_7209667_8 Cytochrome c - - - 0.0000000000000000000000003258 108.0
DPH1_k127_7221940_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 4.76e-291 896.0
DPH1_k127_7221940_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 3.093e-267 824.0
DPH1_k127_7221940_10 CreA protein K05805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 302.0
DPH1_k127_7221940_11 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000003068 238.0
DPH1_k127_7221940_12 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
DPH1_k127_7221940_13 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000001341 198.0
DPH1_k127_7221940_14 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000004495 128.0
DPH1_k127_7221940_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 6.936e-225 698.0
DPH1_k127_7221940_3 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 3.814e-224 696.0
DPH1_k127_7221940_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 555.0
DPH1_k127_7221940_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 553.0
DPH1_k127_7221940_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 447.0
DPH1_k127_7221940_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
DPH1_k127_7221940_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 327.0
DPH1_k127_7221940_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 302.0
DPH1_k127_7379203_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1645.0
DPH1_k127_7379203_1 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1431.0
DPH1_k127_7379203_10 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000504 247.0
DPH1_k127_7379203_11 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000007858 91.0
DPH1_k127_7379203_12 PFAM IstB domain protein ATP-binding protein - - - 0.0002543 44.0
DPH1_k127_7379203_2 TIGRFAM Sodium sulphate symporter K11106,K14445 - - 1.312e-269 833.0
DPH1_k127_7379203_3 Domain of unknown function DUF21 - - - 4.696e-258 797.0
DPH1_k127_7379203_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.072e-222 692.0
DPH1_k127_7379203_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 592.0
DPH1_k127_7379203_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 550.0
DPH1_k127_7379203_7 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 354.0
DPH1_k127_7379203_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 319.0
DPH1_k127_7379203_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 308.0
DPH1_k127_7395047_0 BT1 family - - - 0.0 1033.0
DPH1_k127_7395047_1 MltA specific insert domain K08304 - - 3.725e-256 790.0
DPH1_k127_7395047_10 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.0000000000001841 72.0
DPH1_k127_7395047_12 PFAM Integrase, catalytic core K07497 - - 0.00003723 46.0
DPH1_k127_7395047_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 1.377e-242 752.0
DPH1_k127_7395047_3 Belongs to the peptidase S1C family K04691,K04772 - - 8.154e-226 702.0
DPH1_k127_7395047_4 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 571.0
DPH1_k127_7395047_5 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 473.0
DPH1_k127_7395047_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 473.0
DPH1_k127_7395047_7 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 292.0
DPH1_k127_7395047_8 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000321 150.0
DPH1_k127_7395047_9 Competence protein ComEA K02237 - - 0.0000000000000000000000000000000000001568 143.0
DPH1_k127_7453390_0 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 1.836e-245 764.0
DPH1_k127_7453390_1 Major Facilitator Superfamily - - - 1.249e-241 749.0
DPH1_k127_7453390_2 SMART Diguanylate phosphodiesterase - - - 1.758e-239 743.0
DPH1_k127_7453390_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 5.865e-199 620.0
DPH1_k127_7453390_4 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 359.0
DPH1_k127_7453390_5 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 339.0
DPH1_k127_7453390_6 PFAM Smr protein MutS2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 327.0
DPH1_k127_7453390_7 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000003659 235.0
DPH1_k127_7453390_9 PEP-CTERM motif - - - 0.000000000000000149 87.0
DPH1_k127_7544238_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 553.0
DPH1_k127_7544238_1 RIO1 family K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 495.0
DPH1_k127_7544238_2 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 303.0
DPH1_k127_7544238_3 - - - - 0.0000000000000000000000000000000000002957 146.0
DPH1_k127_7544238_4 Bacteriophage replication gene A protein (GPA) - - - 0.0000000000003424 70.0
DPH1_k127_7544238_5 RIO1 family K07178 - 2.7.11.1 0.00000001023 56.0
DPH1_k127_7613484_0 Signal transduction response regulator, receiver - - - 8.506e-231 716.0
DPH1_k127_7613484_1 PFAM Transposase, IS4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 351.0
DPH1_k127_7613484_2 transposase activity - - - 0.00000000000000000000000008007 108.0
DPH1_k127_7613484_3 transposition - - - 0.0000000000000006696 78.0
DPH1_k127_7613484_4 PFAM Transposase, IS4-like K07481 - - 0.0000000000001187 70.0
DPH1_k127_7613484_5 - - - - 0.00000006015 63.0
DPH1_k127_7614521_0 SMART Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 473.0
DPH1_k127_7614521_1 transposition K07497 - - 0.000000000000000000000000000000000000000000000000001072 191.0
DPH1_k127_7614521_2 transposition K07497 - - 0.000000000000000000000000000003892 124.0
DPH1_k127_7645882_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 2.818e-254 788.0
DPH1_k127_7645882_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 4.194e-221 688.0
DPH1_k127_7645882_10 Transposase DDE domain - - - 0.0000000000008772 67.0
DPH1_k127_7645882_11 Pfam Transposase - - - 0.000000000001138 70.0
DPH1_k127_7645882_12 Pfam Transposase - - - 0.00000000001258 67.0
DPH1_k127_7645882_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 556.0
DPH1_k127_7645882_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 391.0
DPH1_k127_7645882_4 TIGRFAM Methionine sulphoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 333.0
DPH1_k127_7645882_5 - - - - 0.00000000000000000000000001519 109.0
DPH1_k127_7645882_6 - - - - 0.0000000000000000000000111 100.0
DPH1_k127_7645882_8 PFAM transposase, IS4 family protein - - - 0.000000000000001615 76.0
DPH1_k127_7645882_9 - - - - 0.0000000000007462 70.0
DPH1_k127_7764504_0 Protein of unknown function (DUF2868) - - - 6.475e-287 883.0
DPH1_k127_7764504_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 4.191e-208 649.0
DPH1_k127_7764504_2 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 471.0
DPH1_k127_7764504_3 GTP-binding protein, HSR1-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 372.0
DPH1_k127_7877231_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2696.0
DPH1_k127_7877231_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2640.0
DPH1_k127_7877231_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 419.0
DPH1_k127_7877231_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 355.0
DPH1_k127_7877231_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 312.0
DPH1_k127_7877231_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000076 279.0
DPH1_k127_7877231_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000000000125 208.0
DPH1_k127_7877231_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000000000000000000000000000000000000000002958 200.0
DPH1_k127_7877231_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005157 80.0
DPH1_k127_7877231_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000002578 49.0
DPH1_k127_7879009_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1751.0
DPH1_k127_7879009_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1071.0
DPH1_k127_7879009_10 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 2.878e-211 658.0
DPH1_k127_7879009_11 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 556.0
DPH1_k127_7879009_12 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 550.0
DPH1_k127_7879009_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 502.0
DPH1_k127_7879009_14 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 428.0
DPH1_k127_7879009_15 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 385.0
DPH1_k127_7879009_16 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 310.0
DPH1_k127_7879009_17 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 300.0
DPH1_k127_7879009_18 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003089 251.0
DPH1_k127_7879009_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
DPH1_k127_7879009_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1003.0
DPH1_k127_7879009_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000002558 218.0
DPH1_k127_7879009_21 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000278 188.0
DPH1_k127_7879009_22 - - - - 0.000000000000000000000000000000000000000007688 156.0
DPH1_k127_7879009_23 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000000009582 154.0
DPH1_k127_7879009_24 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000000000001451 153.0
DPH1_k127_7879009_25 Belongs to the N-Me-Phe pilin family K02650,K02682 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.0000000000000000000000000000000000000002267 153.0
DPH1_k127_7879009_26 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000000000000006273 116.0
DPH1_k127_7879009_27 PFAM Transposase, IS4-like - - - 0.00000001556 55.0
DPH1_k127_7879009_28 PFAM transposase, IS4 family protein K07481 - - 0.0006215 44.0
DPH1_k127_7879009_3 modulator of DNA gyrase K03568 - - 7.567e-312 957.0
DPH1_k127_7879009_4 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.792e-311 953.0
DPH1_k127_7879009_5 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.92e-280 861.0
DPH1_k127_7879009_6 HflC and HflK could encode or regulate a protease K04088 - - 5.637e-240 743.0
DPH1_k127_7879009_7 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 4.961e-223 695.0
DPH1_k127_7879009_8 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.169e-213 666.0
DPH1_k127_7879009_9 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.496e-213 664.0
DPH1_k127_7962795_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0 1108.0
DPH1_k127_7962795_1 PFAM Lytic transglycosylase-like, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 331.0
DPH1_k127_8108064_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 4.559e-246 762.0
DPH1_k127_8108064_1 Acyltransferase family - - - 6.682e-219 681.0
DPH1_k127_8108064_2 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 9.866e-201 626.0
DPH1_k127_8108064_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 - 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 580.0
DPH1_k127_8108064_4 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 569.0
DPH1_k127_8108064_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 420.0
DPH1_k127_8108064_6 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 388.0
DPH1_k127_8108064_7 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 323.0
DPH1_k127_8108064_8 Trm112p-like protein K09791 - - 0.0000000000000000000000000000006062 121.0
DPH1_k127_8150361_0 PFAM TonB-dependent receptor, beta-barrel - - - 0.0 1829.0
DPH1_k127_8150361_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0 1059.0
DPH1_k127_8150361_10 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 552.0
DPH1_k127_8150361_11 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 541.0
DPH1_k127_8150361_12 Sodium Bile acid symporter family K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 493.0
DPH1_k127_8150361_13 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 455.0
DPH1_k127_8150361_14 Protein of unknown function (DUF3450) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005986 419.0
DPH1_k127_8150361_15 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 368.0
DPH1_k127_8150361_16 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 337.0
DPH1_k127_8150361_17 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002885 255.0
DPH1_k127_8150361_18 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
DPH1_k127_8150361_19 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000000000000000000000000000004253 226.0
DPH1_k127_8150361_2 domain, Protein - - - 1.325e-310 956.0
DPH1_k127_8150361_20 - - - - 0.0000000000000000000000000000000002596 133.0
DPH1_k127_8150361_22 sequence-specific DNA binding - - - 0.0001134 46.0
DPH1_k127_8150361_3 Metallo-peptidase family M12B Reprolysin-like - - - 1.618e-293 906.0
DPH1_k127_8150361_4 Amino acid permease - - - 1.444e-291 899.0
DPH1_k127_8150361_5 Protein tyrosine kinase K08282 - 2.7.11.1 2.94e-237 743.0
DPH1_k127_8150361_6 PFAM MotA TolQ ExbB proton channel K03561 - - 8.421e-220 691.0
DPH1_k127_8150361_7 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 8.305e-216 671.0
DPH1_k127_8150361_8 TPR repeat - - - 2.466e-215 672.0
DPH1_k127_8150361_9 probably responsible for the translocation of the substrate across the membrane K02037 - - 2.548e-194 607.0
DPH1_k127_8175089_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1661.0
DPH1_k127_8175089_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1380.0
DPH1_k127_8175089_10 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 3.146e-194 606.0
DPH1_k127_8175089_11 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 530.0
DPH1_k127_8175089_12 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 505.0
DPH1_k127_8175089_13 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 329.0
DPH1_k127_8175089_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 301.0
DPH1_k127_8175089_15 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 289.0
DPH1_k127_8175089_16 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
DPH1_k127_8175089_17 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000006736 80.0
DPH1_k127_8175089_2 heme binding - - - 0.0 1058.0
DPH1_k127_8175089_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.594e-265 816.0
DPH1_k127_8175089_4 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 3.895e-244 756.0
DPH1_k127_8175089_5 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 3.002e-240 744.0
DPH1_k127_8175089_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.48e-232 720.0
DPH1_k127_8175089_7 PFAM Peptidase S11, D-alanyl-D-alanine carboxypeptidase A K01286,K07258 - 3.4.16.4 1.609e-222 694.0
DPH1_k127_8175089_8 NeuB family K03856 - 2.5.1.54 5.289e-217 674.0
DPH1_k127_8175089_9 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 7.82e-211 657.0
DPH1_k127_8197673_0 EAL domain - - - 0.0 1152.0
DPH1_k127_8197673_1 PFAM Diacylglycerol kinase, catalytic - - - 1.788e-204 638.0
DPH1_k127_8197673_2 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 318.0
DPH1_k127_8197673_3 - - - - 0.000000000000000000000000000000000000000000000000000000001987 203.0
DPH1_k127_8205302_0 lipid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 347.0
DPH1_k127_8205302_1 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.000000000000000000000000001147 114.0
DPH1_k127_8205302_2 - - - - 0.0000000000000000001117 92.0
DPH1_k127_8205302_3 - - - - 0.0000000000004161 74.0
DPH1_k127_8255916_0 SMART ATPase, AAA type, core K06158 - - 0.0 1140.0
DPH1_k127_8255916_1 The M ring may be actively involved in energy transduction K02409 - - 0.0 1004.0
DPH1_k127_8255916_2 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 6.536e-294 903.0
DPH1_k127_8255916_3 response regulator K10943 - - 1.748e-251 779.0
DPH1_k127_8255916_4 Signal transduction histidine kinase K10942 - 2.7.13.3 1.587e-233 725.0
DPH1_k127_8255916_5 Flagellar hook-length control K02414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 530.0
DPH1_k127_8255916_6 Flagellar motor switch K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 454.0
DPH1_k127_8255916_7 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 405.0
DPH1_k127_8255916_8 Flagellar FliJ protein K02413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003658 260.0
DPH1_k127_8255916_9 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000000000000000000000000000000006191 191.0
DPH1_k127_8290136_0 Mediates influx of magnesium ions K03284 - - 7.576e-224 695.0
DPH1_k127_8290136_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 5.927e-217 675.0
DPH1_k127_8290136_2 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 604.0
DPH1_k127_8290136_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 570.0
DPH1_k127_8290136_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 535.0
DPH1_k127_8290136_5 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
DPH1_k127_8290136_6 - - - - 0.000000000000000000000000000000000006016 136.0
DPH1_k127_8290136_7 - - - - 0.0000000000001105 72.0
DPH1_k127_8290136_8 Cytidylyltransferase-like - - - 0.000003356 49.0
DPH1_k127_8320036_0 DNA polymerase X family K02347 - - 0.0 1097.0
DPH1_k127_8320036_1 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 327.0
DPH1_k127_8370119_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1879.0
DPH1_k127_8370119_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1099.0
DPH1_k127_8370119_10 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 492.0
DPH1_k127_8370119_11 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 480.0
DPH1_k127_8370119_12 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 420.0
DPH1_k127_8370119_13 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 400.0
DPH1_k127_8370119_14 phosphatase activity K01560,K07025,K20866,K21063 GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 382.0
DPH1_k127_8370119_15 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 319.0
DPH1_k127_8370119_16 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 282.0
DPH1_k127_8370119_17 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 283.0
DPH1_k127_8370119_18 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000001058 177.0
DPH1_k127_8370119_19 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000000000000000000002162 174.0
DPH1_k127_8370119_2 PFAM Peptidase M17, leucyl aminopeptidase K01255 - 3.4.11.1 5.202e-302 928.0
DPH1_k127_8370119_20 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000005455 130.0
DPH1_k127_8370119_21 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000005307 51.0
DPH1_k127_8370119_3 Lysin motif K08307 - - 3.142e-259 801.0
DPH1_k127_8370119_4 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 1.245e-256 791.0
DPH1_k127_8370119_5 TIGRFAM TIGR03790 family protein - - - 3.289e-241 753.0
DPH1_k127_8370119_6 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 2.043e-237 736.0
DPH1_k127_8370119_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 3.558e-222 692.0
DPH1_k127_8370119_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 538.0
DPH1_k127_8370119_9 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 526.0
DPH1_k127_839269_0 Patatin-like phospholipase K07001 - - 6.604e-244 754.0
DPH1_k127_839269_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006618 454.0
DPH1_k127_839269_2 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 439.0
DPH1_k127_839269_3 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000002612 134.0
DPH1_k127_839269_4 - - - - 0.00000000000000000000000000558 112.0
DPH1_k127_8403137_0 May be involved in recombinational repair of damaged DNA K03631 - - 1.285e-310 958.0
DPH1_k127_8403137_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 1.305e-204 638.0
DPH1_k127_8403137_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 578.0
DPH1_k127_8405434_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1519.0
DPH1_k127_8405434_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1352.0
DPH1_k127_8405434_2 Phosphate-selective porin O and P K07221 - - 3.106e-318 979.0
DPH1_k127_8405434_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007465 278.0
DPH1_k127_8405434_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000000002501 173.0
DPH1_k127_8405434_5 - - - - 0.00000001195 56.0
DPH1_k127_8405434_6 - - - - 0.00001208 48.0
DPH1_k127_8405434_7 TIGRFAM phosphate binding protein K02040 - - 0.0003703 43.0
DPH1_k127_8479979_0 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0 1270.0
DPH1_k127_8479979_1 Sulfatase K01130 - 3.1.6.1 4.033e-280 867.0
DPH1_k127_8479979_10 PFAM CheW-like protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 306.0
DPH1_k127_8479979_11 PFAM Signal transduction response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000009696 233.0
DPH1_k127_8479979_12 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000179 198.0
DPH1_k127_8479979_13 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.00000000000002276 79.0
DPH1_k127_8479979_14 - - - - 0.00000000000009991 72.0
DPH1_k127_8479979_16 - - - - 0.0000002018 53.0
DPH1_k127_8479979_2 Cytochrome c554 and c-prime - - - 4.863e-264 834.0
DPH1_k127_8479979_3 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 1.73e-250 784.0
DPH1_k127_8479979_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 1.033e-218 680.0
DPH1_k127_8479979_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 587.0
DPH1_k127_8479979_6 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 569.0
DPH1_k127_8479979_7 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 577.0
DPH1_k127_8479979_8 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 393.0
DPH1_k127_8479979_9 NlpC/P60 family K13695,K19303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 315.0
DPH1_k127_8494224_0 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 2.352e-258 800.0
DPH1_k127_8494224_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 5.881e-224 694.0
DPH1_k127_8494224_2 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 610.0
DPH1_k127_8494224_3 response regulator K02282,K07689 - - 0.000000000000000000000000000000000001832 147.0
DPH1_k127_8521789_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1734.0
DPH1_k127_8521789_1 ribonuclease II K01147 - 3.1.13.1 0.0 1165.0
DPH1_k127_8521789_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000004036 203.0
DPH1_k127_8521789_11 - - - - 0.0000000001397 64.0
DPH1_k127_8521789_12 - - - - 0.000003356 51.0
DPH1_k127_8521789_13 - - - - 0.00006681 45.0
DPH1_k127_8521789_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 6.101e-266 819.0
DPH1_k127_8521789_3 Peptidase family M23 K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 584.0
DPH1_k127_8521789_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 547.0
DPH1_k127_8521789_5 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 455.0
DPH1_k127_8521789_6 Glutathione S-transferase, N-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 399.0
DPH1_k127_8521789_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 395.0
DPH1_k127_8521789_8 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 285.0
DPH1_k127_8521789_9 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000000000000000000000006661 236.0
DPH1_k127_8589384_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 2.004e-297 917.0
DPH1_k127_8589384_1 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 6.976e-279 860.0
DPH1_k127_8589384_10 D-isomer specific 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000002732 182.0
DPH1_k127_8589384_11 Membrane fusogenic activity K09806 - - 0.00000000000000000000000000000000000000000000374 166.0
DPH1_k127_8589384_12 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000003682 153.0
DPH1_k127_8589384_13 HTH-like domain K07497 - - 0.000000000000000000000002876 111.0
DPH1_k127_8589384_15 Thiazole biosynthesis protein ThiG - - - 0.000000000000001868 78.0
DPH1_k127_8589384_16 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.000000000414 61.0
DPH1_k127_8589384_18 PFAM IstB domain protein ATP-binding protein - - - 0.0008326 44.0
DPH1_k127_8589384_2 Phosphotransferase enzyme family K07102 - 2.7.1.221 2.259e-207 646.0
DPH1_k127_8589384_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 469.0
DPH1_k127_8589384_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 464.0
DPH1_k127_8589384_5 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 434.0
DPH1_k127_8589384_6 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 322.0
DPH1_k127_8589384_7 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 306.0
DPH1_k127_8589384_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009974 273.0
DPH1_k127_8589384_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000003567 216.0
DPH1_k127_8591445_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1253.0
DPH1_k127_8591445_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 506.0
DPH1_k127_8591445_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 341.0
DPH1_k127_8591445_3 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000000005404 122.0
DPH1_k127_8591445_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000005091 65.0
DPH1_k127_8657371_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1170.0
DPH1_k127_8657371_1 glutamate--cysteine ligase - - - 2.832e-258 801.0
DPH1_k127_8657371_2 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 550.0
DPH1_k127_8657371_3 succinate dehydrogenase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000121 226.0
DPH1_k127_8657371_4 SURF4 family K15977 - - 0.0000000000000000000000000000000000000000000000000000000000000006078 220.0
DPH1_k127_8657371_5 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000002448 155.0
DPH1_k127_8657371_6 universal stress protein - - - 0.0000000000000000000000000000001054 124.0
DPH1_k127_8657371_7 Succinate dehydrogenase, hydrophobic K00242 - - 0.000000000000000000000000000000366 126.0
DPH1_k127_870889_0 ABC transporter K06147 - - 6.908e-285 877.0
DPH1_k127_870889_1 Protein of unknown function, DUF484 K02488 - 2.7.7.65 2.447e-234 726.0
DPH1_k127_870889_10 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000000000000000002828 124.0
DPH1_k127_870889_11 Domain of unknown function (DUF4372) - - - 0.0000003845 56.0
DPH1_k127_870889_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 1.343e-217 679.0
DPH1_k127_870889_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 581.0
DPH1_k127_870889_4 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 562.0
DPH1_k127_870889_5 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 368.0
DPH1_k127_870889_6 Protein of unknown function (DUF3619) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 359.0
DPH1_k127_870889_7 PFAM Sulfotransferase K01014 - 2.8.2.1 0.0000000000000000000000000000000000000002356 149.0
DPH1_k127_870889_8 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000004569 145.0
DPH1_k127_870889_9 Protein of unknown function (DUF1353) - - - 0.0000000000000000000000000000000236 128.0
DPH1_k127_8805990_0 PFAM Glutaredoxin - - - 6.237e-227 708.0
DPH1_k127_8805990_1 Transposase, Mutator family - - - 1.374e-214 672.0
DPH1_k127_8805990_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
DPH1_k127_8805990_3 cytochrome - - - 0.000008338 49.0
DPH1_k127_881032_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1596.0
DPH1_k127_881032_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1142.0
DPH1_k127_881032_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 4.588e-290 892.0
DPH1_k127_881032_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.336e-284 875.0
DPH1_k127_881032_4 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 1.01e-206 650.0
DPH1_k127_881032_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 4.408e-206 644.0
DPH1_k127_881032_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 495.0
DPH1_k127_881032_7 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 479.0
DPH1_k127_881032_8 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 411.0
DPH1_k127_881032_9 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 329.0
DPH1_k127_8848322_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 6.314e-217 676.0
DPH1_k127_8848322_1 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 467.0
DPH1_k127_8848322_10 - - - - 0.00000000000000008324 79.0
DPH1_k127_8848322_11 - - - - 0.000000000000002472 75.0
DPH1_k127_8848322_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 441.0
DPH1_k127_8848322_3 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 436.0
DPH1_k127_8848322_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 347.0
DPH1_k127_8848322_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 300.0
DPH1_k127_8848322_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008491 274.0
DPH1_k127_8848322_8 - - - - 0.000000000000000000000000003612 111.0
DPH1_k127_8848322_9 - - - - 0.00000000000000000001406 90.0
DPH1_k127_8932102_0 Putative exonuclease SbcCD, C subunit - - - 7.169e-284 880.0
DPH1_k127_8932102_1 Uncharacterized protein conserved in bacteria N-term (DUF3322) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 565.0
DPH1_k127_8932102_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 494.0
DPH1_k127_8932102_3 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008667 374.0
DPH1_k127_8932102_4 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000002704 126.0
DPH1_k127_8932102_5 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000001086 121.0
DPH1_k127_8932102_6 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000002248 56.0
DPH1_k127_8954314_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1447.0
DPH1_k127_8954314_1 Putative diguanylate phosphodiesterase - - - 9.715e-289 890.0
DPH1_k127_8954314_10 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000000000001488 141.0
DPH1_k127_8954314_11 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00003292 49.0
DPH1_k127_8954314_12 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00003926 48.0
DPH1_k127_8954314_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.796e-262 810.0
DPH1_k127_8954314_3 Signal transduction histidine kinase K15011 - 2.7.13.3 4.043e-256 792.0
DPH1_k127_8954314_4 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 7.901e-255 788.0
DPH1_k127_8954314_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 4.969e-211 658.0
DPH1_k127_8954314_6 Protein conserved in bacteria - - - 1.943e-205 642.0
DPH1_k127_8954314_7 Response regulator receiver K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
DPH1_k127_8954314_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 301.0
DPH1_k127_8954314_9 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
DPH1_k127_8999767_0 Double sensory domain of two-component sensor kinase - - - 0.0 1797.0
DPH1_k127_8999767_1 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1229.0
DPH1_k127_8999767_2 Beta-Casp domain K07576 - - 1.873e-296 910.0
DPH1_k127_8999767_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.371e-286 881.0
DPH1_k127_8999767_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 2.189e-283 872.0
DPH1_k127_8999767_5 Protein of unknown function (DUF3422) - - - 6.258e-257 796.0
DPH1_k127_8999767_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 1.685e-240 743.0
DPH1_k127_8999767_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 365.0
DPH1_k127_8999767_8 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000002031 213.0
DPH1_k127_8999767_9 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000007607 190.0
DPH1_k127_9011916_0 KAP family P-loop domain - - - 0.0 1097.0
DPH1_k127_9011916_1 Methyl-accepting chemotaxis sensory transducer with Pas Pac sensor K03406,K03776 - - 8.655e-281 872.0
DPH1_k127_9011916_2 PFAM Transposase, IS66 K07484 - - 1.995e-263 818.0
DPH1_k127_9011916_3 IS66 Orf2-like K07484 - - 0.000000000000000000000000000000000000000000000000000001003 195.0
DPH1_k127_9011916_4 PFAM Transposase, IS4-like K07481 - - 0.000000000000000000000000000000000005076 139.0
DPH1_k127_9079581_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1175.0
DPH1_k127_9079581_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.686e-269 835.0
DPH1_k127_9079581_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.473e-260 811.0
DPH1_k127_9079581_3 Carboxysome Shell Carbonic Anhydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 600.0
DPH1_k127_9079581_4 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 355.0
DPH1_k127_9079581_5 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 308.0
DPH1_k127_9079581_6 Nudix hydrolase K08310 - 3.6.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005836 271.0
DPH1_k127_9079581_7 Putative regulatory protein - - - 0.000000000000000000000000000000000000000002575 157.0
DPH1_k127_9079581_8 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000002342 75.0
DPH1_k127_9104754_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1471.0
DPH1_k127_9104754_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 2.289e-272 840.0
DPH1_k127_9104754_2 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 368.0
DPH1_k127_9104754_3 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 334.0
DPH1_k127_9104754_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000288 264.0
DPH1_k127_92802_0 Mechanosensitive ion channel K05802,K22051 - - 0.0 1582.0
DPH1_k127_92802_1 McrBC 5-methylcytosine restriction system component K19147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 421.0
DPH1_k127_92802_2 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000004433 226.0
DPH1_k127_92802_3 - - - - 0.000000000000000000000000000000000000000002488 159.0
DPH1_k127_92802_4 Putative transposase - - - 0.00000000000000000000000000000000000000006897 155.0
DPH1_k127_92802_5 PFAM Integrase, catalytic core K07497 - - 0.0000000000000000002912 89.0
DPH1_k127_92802_6 - - - - 0.0000000000000008131 77.0
DPH1_k127_9338412_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1858.0
DPH1_k127_9338412_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1472.0
DPH1_k127_9338412_10 Iron-storage protein K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 309.0
DPH1_k127_9338412_11 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 290.0
DPH1_k127_9338412_12 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004518 251.0
DPH1_k127_9338412_13 transporter component K07112 - - 0.00000000000000000000000000000000000000000000000000000000001828 209.0
DPH1_k127_9338412_14 transcriptional regulator, ArsR - - - 0.0000000000000000000000000000000000000000000000000000005954 193.0
DPH1_k127_9338412_15 Protein of unknown function (DUF2806) - - - 0.000000000000000000000000000000000000000000000002621 174.0
DPH1_k127_9338412_16 - - - - 0.00000000000000000000000000000286 120.0
DPH1_k127_9338412_17 Hemin uptake protein hemP - - - 0.00000000000000000000008162 99.0
DPH1_k127_9338412_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.204e-295 912.0
DPH1_k127_9338412_3 Sugar (and other) transporter - - - 3.981e-262 811.0
DPH1_k127_9338412_4 MOFRL family K11529 - 2.7.1.165 3.368e-238 741.0
DPH1_k127_9338412_5 PFAM Heat shock protein DnaJ, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 593.0
DPH1_k127_9338412_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 566.0
DPH1_k127_9338412_7 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 387.0
DPH1_k127_9338412_8 Uncharacterized protein conserved in bacteria (DUF2325) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 346.0
DPH1_k127_9338412_9 Tyrosine phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 325.0
DPH1_k127_9397269_0 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 517.0
DPH1_k127_9397269_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 499.0
DPH1_k127_9397269_2 Glycosyltransferase like family K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 467.0
DPH1_k127_9397269_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 379.0
DPH1_k127_9397269_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
DPH1_k127_940129_0 Methionine synthase K00548 - 2.1.1.13 0.0 2410.0
DPH1_k127_940129_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 8.308e-292 897.0
DPH1_k127_940129_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 566.0
DPH1_k127_940129_3 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 428.0
DPH1_k127_940129_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 287.0
DPH1_k127_940129_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000335 277.0
DPH1_k127_940129_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001664 80.0
DPH1_k127_940129_7 - - - - 0.000000000004053 68.0
DPH1_k127_940129_9 - - - - 0.0005464 46.0
DPH1_k127_9428724_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1317.0
DPH1_k127_9428724_1 MFS_1 like family - - - 1.62e-256 792.0
DPH1_k127_9428724_10 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 360.0
DPH1_k127_9428724_11 PFAM Di-haem cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 343.0
DPH1_k127_9428724_12 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
DPH1_k127_9428724_13 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 295.0
DPH1_k127_9428724_14 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003194 277.0
DPH1_k127_9428724_15 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000235 274.0
DPH1_k127_9428724_16 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000003675 191.0
DPH1_k127_9428724_17 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000000008281 70.0
DPH1_k127_9428724_2 Tetratricopeptide repeat K02200 - - 1.691e-247 768.0
DPH1_k127_9428724_3 alcohol dehydrogenase K00001 - 1.1.1.1 3.453e-217 678.0
DPH1_k127_9428724_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 610.0
DPH1_k127_9428724_5 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 571.0
DPH1_k127_9428724_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 487.0
DPH1_k127_9428724_7 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 472.0
DPH1_k127_9428724_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 399.0
DPH1_k127_9428724_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 378.0
DPH1_k127_9448404_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 2.759e-270 853.0
DPH1_k127_9448404_1 Cobalamin synthesis protein cobW C-terminal domain - - - 7.463e-252 778.0
DPH1_k127_9448404_2 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 393.0
DPH1_k127_9448404_3 Protein of unknown function (DUF1826) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 359.0
DPH1_k127_9448404_4 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 295.0
DPH1_k127_9448404_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 296.0
DPH1_k127_9448404_6 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000005608 110.0
DPH1_k127_9448404_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000005083 98.0
DPH1_k127_9485848_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1575.0
DPH1_k127_9485848_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1298.0
DPH1_k127_9485848_10 Protein of unknown function (DUF2905) - - - 0.00000000000000000000000000000000004024 134.0
DPH1_k127_9485848_11 - - - - 0.000000000000000007451 85.0
DPH1_k127_9485848_2 Participates in both transcription termination and antitermination K02600 - - 2.483e-299 920.0
DPH1_k127_9485848_3 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 8.102e-198 617.0
DPH1_k127_9485848_4 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 604.0
DPH1_k127_9485848_5 Nickel-dependent hydrogenase K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 402.0
DPH1_k127_9485848_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 377.0
DPH1_k127_9485848_7 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 329.0
DPH1_k127_9485848_8 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 303.0
DPH1_k127_9485848_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002121 251.0
DPH1_k127_9535219_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 2906.0
DPH1_k127_9535219_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.09e-315 968.0
DPH1_k127_9535219_2 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 9.444e-299 918.0
DPH1_k127_9535219_3 RNase_H superfamily - - - 1.264e-290 894.0
DPH1_k127_9535219_4 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 5.022e-218 682.0
DPH1_k127_9535219_5 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 515.0
DPH1_k127_9535219_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000000000001042 201.0
DPH1_k127_9535219_8 - - - - 0.00000004085 55.0
DPH1_k127_9535219_9 - - - - 0.000000146 55.0
DPH1_k127_9542784_0 Cell wall hydrolase autolysin K01448 - 3.5.1.28 5.12e-268 830.0
DPH1_k127_9542784_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.241e-247 766.0
DPH1_k127_9542784_10 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000000000000008394 182.0
DPH1_k127_9542784_11 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000001753 164.0
DPH1_k127_9542784_12 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000006559 81.0
DPH1_k127_9542784_13 PFAM Integrase, catalytic core K07497 - - 0.0000171 48.0
DPH1_k127_9542784_14 ISXO2-like transposase domain - - - 0.0005102 43.0
DPH1_k127_9542784_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 2.171e-240 744.0
DPH1_k127_9542784_3 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 6.155e-211 657.0
DPH1_k127_9542784_4 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 588.0
DPH1_k127_9542784_5 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 463.0
DPH1_k127_9542784_6 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 368.0
DPH1_k127_9542784_7 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 334.0
DPH1_k127_9542784_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 300.0
DPH1_k127_9542784_9 DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
DPH1_k127_9542794_0 SNARE associated Golgi protein - - - 0.0 1345.0
DPH1_k127_9542794_1 AMP-binding enzyme C-terminal domain K00666 - - 4.612e-260 811.0
DPH1_k127_9542794_2 Radical SAM superfamily - - - 8.102e-205 638.0
DPH1_k127_9542794_3 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.466e-194 614.0
DPH1_k127_9542794_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 543.0
DPH1_k127_9542794_5 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 530.0
DPH1_k127_9542794_6 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 494.0
DPH1_k127_9542794_7 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 397.0
DPH1_k127_9542794_9 ISXO2-like transposase domain - - - 0.0005102 43.0
DPH1_k127_9550668_0 Outer membrane efflux protein - - - 0.0 1287.0
DPH1_k127_9550668_1 Formate acetyltransferase K00656 - 2.3.1.54 0.0 1217.0
DPH1_k127_9550668_10 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 2.446e-218 679.0
DPH1_k127_9550668_11 Permease MlaE K02066 - - 3.735e-217 677.0
DPH1_k127_9550668_12 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 2.541e-208 649.0
DPH1_k127_9550668_13 NmrA-like family K00091 - 1.1.1.219 1.03e-203 635.0
DPH1_k127_9550668_14 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 600.0
DPH1_k127_9550668_15 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 547.0
DPH1_k127_9550668_16 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 525.0
DPH1_k127_9550668_17 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 522.0
DPH1_k127_9550668_18 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 509.0
DPH1_k127_9550668_19 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 502.0
DPH1_k127_9550668_2 GGDEF domain - - - 2.435e-284 875.0
DPH1_k127_9550668_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 451.0
DPH1_k127_9550668_21 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 443.0
DPH1_k127_9550668_22 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 391.0
DPH1_k127_9550668_23 Putative zinc-finger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 392.0
DPH1_k127_9550668_24 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 374.0
DPH1_k127_9550668_25 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 352.0
DPH1_k127_9550668_26 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 332.0
DPH1_k127_9550668_27 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 322.0
DPH1_k127_9550668_28 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004337 277.0
DPH1_k127_9550668_29 Response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000045 252.0
DPH1_k127_9550668_3 PFAM Major facilitator superfamily K08218 - - 1.563e-278 859.0
DPH1_k127_9550668_30 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003232 252.0
DPH1_k127_9550668_31 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000002963 196.0
DPH1_k127_9550668_32 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000001601 195.0
DPH1_k127_9550668_34 - - - - 0.0000000000000000000000000000000000004646 142.0
DPH1_k127_9550668_35 - - - - 0.000000000000000000000000001051 115.0
DPH1_k127_9550668_37 Transposase K07481 - - 0.00000000000000017 80.0
DPH1_k127_9550668_38 PFAM Transposase, IS4-like K07481 - - 0.000000000000000834 81.0
DPH1_k127_9550668_39 PFAM transposase, mutator type - - - 0.0000000000001616 72.0
DPH1_k127_9550668_4 PFAM Glycosyl transferase, family 2 K11936 - - 5.098e-267 824.0
DPH1_k127_9550668_40 small periplasmic lipoprotein - - - 0.000000000004374 66.0
DPH1_k127_9550668_41 - - - - 0.00000000008566 67.0
DPH1_k127_9550668_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 3.369e-258 797.0
DPH1_k127_9550668_6 Transglycosylase SLT domain K08305 - - 4.375e-255 789.0
DPH1_k127_9550668_8 Subtilase family K08651,K14645 - 3.4.21.66 1.213e-246 765.0
DPH1_k127_9550668_9 AFG1-like ATPase K06916 - - 2.449e-242 751.0
DPH1_k127_9666792_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0 1173.0
DPH1_k127_9666792_1 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 604.0
DPH1_k127_9684030_0 Histidine kinase K20974 - 2.7.13.3 0.0 2208.0
DPH1_k127_9684030_1 Putative diguanylate phosphodiesterase - - - 2.743e-211 662.0
DPH1_k127_9684030_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 351.0
DPH1_k127_9847280_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1886.0
DPH1_k127_9847280_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 593.0
DPH1_k127_9847280_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000001915 55.0
DPH1_k127_985245_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1632.0
DPH1_k127_985245_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1285.0
DPH1_k127_985245_10 - - - - 0.000000000000000000000000000000000008748 139.0
DPH1_k127_985245_11 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000003815 79.0
DPH1_k127_985245_2 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1146.0
DPH1_k127_985245_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.06e-275 847.0
DPH1_k127_985245_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 3.679e-214 666.0
DPH1_k127_985245_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 419.0
DPH1_k127_985245_6 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007565 258.0
DPH1_k127_985245_7 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009302 258.0
DPH1_k127_985245_8 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
DPH1_k127_985245_9 - - - - 0.000000000000000000000000000000000000000000000000000002857 192.0
DPH1_k127_988559_0 fatty acid desaturase K00507 - 1.14.19.1 9.665e-258 795.0
DPH1_k127_988559_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 532.0
DPH1_k127_988559_2 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 498.0
DPH1_k127_988559_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 478.0
DPH1_k127_988559_4 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 376.0
DPH1_k127_988559_5 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 326.0
DPH1_k127_988559_6 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003059 271.0
DPH1_k127_988559_7 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000008079 216.0
DPH1_k127_988559_8 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000000000000000000000000000004379 190.0
DPH1_k127_988559_9 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000002405 54.0
DPH1_k127_9894751_0 PFAM Integrase catalytic - - - 1.923e-220 693.0
DPH1_k127_9894751_1 PFAM IstB domain protein ATP-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 384.0
DPH1_k127_9894751_2 - - - - 0.000000000000000000000002197 108.0
DPH1_k127_9894751_3 Histidine kinase - - - 0.000000000000000000000002822 106.0
DPH1_k127_9894751_4 - - - - 0.000000000000001496 78.0
DPH1_k127_9922507_0 Signal transduction histidine kinase K07637 - 2.7.13.3 6.175e-266 822.0
DPH1_k127_9922507_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 3.375e-232 719.0
DPH1_k127_9922507_2 PFAM Signal transduction response regulator, receiver K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 437.0
DPH1_k127_9922507_3 Small metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
DPH1_k127_9922507_4 peptidase - - - 0.00000000000000000000000000000000000000000000001131 171.0
DPH1_k127_9922507_5 membrane - - - 0.000000000000000000000000000000000000000000008462 163.0
DPH1_k127_9922507_6 - - - - 0.0000000000000000000000000000000000000000004491 161.0
DPH1_k127_9932528_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1508.0
DPH1_k127_9932528_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1201.0
DPH1_k127_9932528_10 PFAM Permease YjgP YjgQ K11720 - - 1.941e-203 638.0
DPH1_k127_9932528_11 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 554.0
DPH1_k127_9932528_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 539.0
DPH1_k127_9932528_13 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 532.0
DPH1_k127_9932528_14 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 528.0
DPH1_k127_9932528_15 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 514.0
DPH1_k127_9932528_16 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 511.0
DPH1_k127_9932528_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 494.0
DPH1_k127_9932528_18 two-component system sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
DPH1_k127_9932528_19 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 413.0
DPH1_k127_9932528_2 lipid kinase activity - - - 0.0 1174.0
DPH1_k127_9932528_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 400.0
DPH1_k127_9932528_21 PFAM Glycoside hydrolase, family 19, catalytic K03791 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 366.0
DPH1_k127_9932528_22 Protein of unknown function (DUF2959) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 359.0
DPH1_k127_9932528_23 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 347.0
DPH1_k127_9932528_24 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 339.0
DPH1_k127_9932528_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 310.0
DPH1_k127_9932528_26 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002364 279.0
DPH1_k127_9932528_27 Putative DNA-binding domain K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008769 279.0
DPH1_k127_9932528_28 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004811 273.0
DPH1_k127_9932528_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004873 249.0
DPH1_k127_9932528_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1111.0
DPH1_k127_9932528_30 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007877 250.0
DPH1_k127_9932528_31 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000002905 201.0
DPH1_k127_9932528_32 - - - - 0.00000000000000000000000000000000000000009141 154.0
DPH1_k127_9932528_33 Universal stress protein family - - - 0.000000000000000000000000000000001345 134.0
DPH1_k127_9932528_34 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000002615 82.0
DPH1_k127_9932528_35 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000002752 69.0
DPH1_k127_9932528_4 ABC transporter K06147,K18893 - - 0.0 1088.0
DPH1_k127_9932528_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.325e-310 953.0
DPH1_k127_9932528_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 5.314e-264 814.0
DPH1_k127_9932528_7 Sulfate permease family - - - 1.322e-234 731.0
DPH1_k127_9932528_8 acetyltransferase - - - 4.346e-223 695.0
DPH1_k127_9932528_9 PFAM Permease YjgP YjgQ K07091 - - 5.893e-204 637.0