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Overview

ID MAG00712
Name DPH3_bin.15
Sample SMP0021
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class DSWW01
Order DSWW01
Family DSWW01
Genus S015-6
Species
Assembly information
Completeness (%) 80.56
Contamination (%) 4.09
GC content (%) 60.0
N50 (bp) 4,876
Genome size (bp) 3,647,009

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3317

Gene name Description KEGG GOs EC E-value Score Sequence
DPH3_k127_10008051_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 254.0
DPH3_k127_10008051_1 Transglycosylase SLT domain K06381,K08309 - - 0.000000000000000000000000000000000000001628 159.0
DPH3_k127_10008051_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000005921 90.0
DPH3_k127_10029769_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 456.0
DPH3_k127_10029769_1 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000009684 205.0
DPH3_k127_10029769_2 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000002253 74.0
DPH3_k127_10029769_3 helix_turn_helix, Lux Regulon - - - 0.0003617 44.0
DPH3_k127_10036941_0 PFAM Acyl-CoA dehydrogenase K09456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 527.0
DPH3_k127_10036941_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 417.0
DPH3_k127_10036941_2 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 307.0
DPH3_k127_10036941_3 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000001407 118.0
DPH3_k127_10061512_0 diguanylate cyclase - - - 0.00000000000000000000000000000000000000004138 169.0
DPH3_k127_10061512_1 Diguanylate cyclase - - - 0.0000000000000000000000000004749 125.0
DPH3_k127_10061512_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000001628 60.0
DPH3_k127_10061512_3 methyltransferase - - - 0.000004502 56.0
DPH3_k127_10126175_0 PFAM Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 403.0
DPH3_k127_10126175_1 hydrolases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002105 273.0
DPH3_k127_10126175_2 Ndr family K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000001959 198.0
DPH3_k127_10126175_3 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000000000000000000000000000000000001888 184.0
DPH3_k127_10126175_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000007371 190.0
DPH3_k127_10126175_5 TIGRFAM Diguanylate cyclase - - - 0.000002066 54.0
DPH3_k127_10156796_0 Catalyzes the synthesis of activated sulfate K00860,K00955 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001585 265.0
DPH3_k127_10156796_1 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000017 145.0
DPH3_k127_10165348_0 FAD binding domain K00394 - 1.8.99.2 0.0 1019.0
DPH3_k127_10165348_1 TIGRFAM sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 6.594e-194 611.0
DPH3_k127_10165348_2 FAD dependent oxidoreductase K16885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 455.0
DPH3_k127_10165348_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 414.0
DPH3_k127_10165348_4 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002488 267.0
DPH3_k127_10165348_5 nitrate reductase activity - - - 0.0000000000000000000000000000000000000002279 158.0
DPH3_k127_10165348_6 phosphatase homologous to the C-terminal domain of histone macroH2A1 K07478 - - 0.0000000000000000000000000000000582 131.0
DPH3_k127_10165348_7 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000006197 108.0
DPH3_k127_10165348_8 PFAM response regulator receiver - - - 0.000000000000000000000248 112.0
DPH3_k127_10165348_9 PFAM response regulator receiver - - - 0.000000000000000002652 89.0
DPH3_k127_10179009_0 histidine kinase, HAMP K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 609.0
DPH3_k127_10179009_1 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000005869 244.0
DPH3_k127_10179009_10 Type II secretion system (T2SS), protein K K02460 - - 0.0001712 54.0
DPH3_k127_10179009_2 Type IV pilus assembly protein PilM; K02461 - - 0.0000000000000000000000000000000000118 154.0
DPH3_k127_10179009_3 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins - - - 0.000000000000000000003323 100.0
DPH3_k127_10179009_4 - - - - 0.00000000000000002505 93.0
DPH3_k127_10179009_5 Prokaryotic N-terminal methylation motif K02456,K02457,K02458,K02459,K02655,K10926 - - 0.0000000002552 72.0
DPH3_k127_10179009_6 Prokaryotic N-terminal methylation motif - - - 0.000000003394 63.0
DPH3_k127_10179009_8 FHA Domain K01768 - 4.6.1.1 0.0000001886 64.0
DPH3_k127_10179009_9 histone H2A K63-linked ubiquitination K02283,K03466 - - 0.000002292 58.0
DPH3_k127_10185436_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 318.0
DPH3_k127_10185436_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000003656 223.0
DPH3_k127_10185436_2 - - - - 0.0000000000000000000000000002146 123.0
DPH3_k127_10185436_3 lipoprotein involved in nitrous oxide reduction K21601 - - 0.000000000000000000002655 101.0
DPH3_k127_10189275_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.261e-211 661.0
DPH3_k127_10189275_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001098 230.0
DPH3_k127_10189275_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000008475 216.0
DPH3_k127_10189275_3 RNA polymerase I subunit A N-terminus K03046 - 2.7.7.6 0.00000000000000000000000000000002183 127.0
DPH3_k127_10217797_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 390.0
DPH3_k127_10217797_1 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 353.0
DPH3_k127_10217797_2 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 329.0
DPH3_k127_10217797_3 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 299.0
DPH3_k127_10235344_0 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 507.0
DPH3_k127_10235344_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002409 242.0
DPH3_k127_10235344_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000151 172.0
DPH3_k127_10249264_0 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 343.0
DPH3_k127_10249264_1 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 311.0
DPH3_k127_10249264_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001201 243.0
DPH3_k127_10249264_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000008388 69.0
DPH3_k127_10249264_4 Plasmid pRiA4b ORF-3-like protein - - - 0.0000001062 57.0
DPH3_k127_10262664_0 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 309.0
DPH3_k127_10262664_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002455 262.0
DPH3_k127_10265260_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 443.0
DPH3_k127_10265260_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000381 209.0
DPH3_k127_10271190_0 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 507.0
DPH3_k127_10271190_1 Belongs to the thiolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 419.0
DPH3_k127_10271190_10 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000007691 103.0
DPH3_k127_10271190_2 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 418.0
DPH3_k127_10271190_3 lipid-transfer protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 330.0
DPH3_k127_10271190_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002278 273.0
DPH3_k127_10271190_5 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000003818 165.0
DPH3_k127_10271190_6 Rubredoxin-like zinc ribbon domain (DUF35_N) - - - 0.00000000000000000000000000000000000000001814 156.0
DPH3_k127_10271190_7 dehydratase - - - 0.000000000000000000000000000000000000008664 151.0
DPH3_k127_10271190_8 Rubredoxin-like zinc ribbon domain (DUF35_N) - - - 0.0000000000000000000000000000000000001041 145.0
DPH3_k127_10271190_9 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000002117 123.0
DPH3_k127_10301421_0 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002588 285.0
DPH3_k127_10301421_1 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004784 265.0
DPH3_k127_10301421_2 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000001137 230.0
DPH3_k127_10301421_3 - - - - 0.0000000000000000000000000000000000000000005226 164.0
DPH3_k127_10327008_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 466.0
DPH3_k127_10327008_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 375.0
DPH3_k127_10327008_2 Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000001696 107.0
DPH3_k127_10327008_4 Reeler domain - - - 0.000007692 57.0
DPH3_k127_10341252_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 517.0
DPH3_k127_10341252_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 349.0
DPH3_k127_10341252_2 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 325.0
DPH3_k127_10341252_3 B12 binding domain - - - 0.00000000000000000000000000000000000000000000004336 184.0
DPH3_k127_10341252_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000493 163.0
DPH3_k127_10359074_0 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000671 364.0
DPH3_k127_10359074_1 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000003742 196.0
DPH3_k127_10359074_2 Putative thioesterase (yiiD_Cterm) - - - 0.000000000000000000003788 97.0
DPH3_k127_10381570_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000008956 258.0
DPH3_k127_10381570_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000001109 232.0
DPH3_k127_10386007_0 Orotidine 5'-phosphate decarboxylase / HUMPS family K13831 - 4.1.2.43,5.3.1.27 5.396e-198 625.0
DPH3_k127_10386007_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 567.0
DPH3_k127_10386007_10 Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules K02614 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 - 0.0000000000000000000000000000005868 126.0
DPH3_k127_10386007_2 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 387.0
DPH3_k127_10386007_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000005344 237.0
DPH3_k127_10386007_4 4 iron, 4 sulfur cluster binding K18356 - 1.2.1.58 0.00000000000000000000000000000000000000000000000000000000000008316 224.0
DPH3_k127_10386007_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000117 189.0
DPH3_k127_10386007_6 KR domain K03366 - 1.1.1.304,1.1.1.76 0.00000000000000000000000000000000000000000000000003758 189.0
DPH3_k127_10386007_7 COGs COG0794 sugar phosphate isomerase involved in capsule formation K08094 - 5.3.1.27 0.000000000000000000000000000000000003511 145.0
DPH3_k127_10386007_8 SnoaL-like domain - - - 0.00000000000000000000000000000000004412 138.0
DPH3_k127_10386007_9 - - - - 0.000000000000000000000000000000001345 134.0
DPH3_k127_10402008_0 Belongs to the thiolase family K07550 - - 0.0000000000000000000000000000000000000000000000000000000000000000001258 238.0
DPH3_k127_10402008_1 Aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000005377 236.0
DPH3_k127_10402008_2 Enoyl-(Acyl carrier protein) reductase K00059,K00216,K03366 - 1.1.1.100,1.1.1.304,1.1.1.76,1.3.1.28 0.000000000000000000000000000000000000000000000000000004625 200.0
DPH3_k127_10402008_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000000003594 119.0
DPH3_k127_10402008_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000003146 80.0
DPH3_k127_10404168_0 transcriptional regulator - - - 0.00000000000000000000000000000000000000001147 161.0
DPH3_k127_10404168_1 nUDIX hydrolase - - - 0.00000000000000000000000000003172 125.0
DPH3_k127_10407935_0 PFAM Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 429.0
DPH3_k127_10407935_1 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000003261 244.0
DPH3_k127_10407935_2 PFAM peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000001435 219.0
DPH3_k127_10407935_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000003593 214.0
DPH3_k127_10407935_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000006362 194.0
DPH3_k127_10420429_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.208e-275 874.0
DPH3_k127_10420429_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 433.0
DPH3_k127_10435471_0 Flavin containing amine oxidoreductase K09516,K09835 - 1.3.99.23,5.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 524.0
DPH3_k127_10435471_1 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 442.0
DPH3_k127_10435471_2 Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 389.0
DPH3_k127_10435471_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 303.0
DPH3_k127_10435471_4 TGS domain K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008394 268.0
DPH3_k127_10435471_5 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000293 132.0
DPH3_k127_10435471_6 - - - - 0.0000000000000000000000001977 108.0
DPH3_k127_10435471_7 - - - - 0.0000000000001107 81.0
DPH3_k127_10435471_8 Sporulation domain protein K03749 - - 0.0005325 51.0
DPH3_k127_10449048_0 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000002686 253.0
DPH3_k127_10449048_1 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000003865 142.0
DPH3_k127_10449048_2 Aminotransferase class-V - - - 0.00000000000000000000000009389 110.0
DPH3_k127_10449048_3 Dinitrogenase iron-molybdenum cofactor - - - 0.000000002436 59.0
DPH3_k127_10465505_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001483 284.0
DPH3_k127_1047420_0 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 7.692e-221 702.0
DPH3_k127_1047420_1 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 414.0
DPH3_k127_1047420_2 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00003149 46.0
DPH3_k127_1047420_3 Protein of unknown function (DUF1648) - - - 0.0003504 44.0
DPH3_k127_10491969_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 7.006e-211 670.0
DPH3_k127_10491969_1 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005661 278.0
DPH3_k127_10491969_2 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001279 242.0
DPH3_k127_10491969_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000003663 237.0
DPH3_k127_10491969_4 Urea transporter K08717 - - 0.00000000000000000000000000000000000000000000000000000003565 214.0
DPH3_k127_10491969_5 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000002529 100.0
DPH3_k127_10492191_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 8.739e-253 786.0
DPH3_k127_10492191_1 Belongs to the aldehyde dehydrogenase family K00128,K06447 - 1.2.1.3,1.2.1.71 3.526e-239 747.0
DPH3_k127_10492191_10 PFAM ThiamineS - - - 0.000000000009157 67.0
DPH3_k127_10492191_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 331.0
DPH3_k127_10492191_3 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 303.0
DPH3_k127_10492191_4 nitrite reductase (NAD(P)H) large subunit K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000003289 278.0
DPH3_k127_10492191_5 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000001346 211.0
DPH3_k127_10492191_6 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000001522 206.0
DPH3_k127_10492191_7 queuosine salvage K09125 - - 0.00000000000000000000000004965 117.0
DPH3_k127_10492191_8 PFAM Rubrerythrin - - - 0.00000000000000000007318 94.0
DPH3_k127_10492191_9 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000001616 89.0
DPH3_k127_10500796_0 - - - - 0.000000000000000000000000000000000000000000000001961 184.0
DPH3_k127_10500796_1 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000006794 154.0
DPH3_k127_10500796_2 Ion channel - - - 0.00000000000000000000000000000001399 136.0
DPH3_k127_10520730_0 Aldo/keto reductase family K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 403.0
DPH3_k127_10520730_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 317.0
DPH3_k127_10520730_2 PFAM AMP-dependent synthetase and ligase K00666,K12508 - 6.2.1.34 0.000000000000000000000000000000006428 140.0
DPH3_k127_10520730_3 - - - - 0.000000000000000000000001386 106.0
DPH3_k127_10536062_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 320.0
DPH3_k127_10536062_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 315.0
DPH3_k127_10536062_2 Elongation factor TS K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002035 260.0
DPH3_k127_10536062_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
DPH3_k127_10536062_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.0000000000000001038 81.0
DPH3_k127_10554166_0 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 4.681e-309 953.0
DPH3_k127_10554166_1 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000003144 209.0
DPH3_k127_10554166_2 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000005143 184.0
DPH3_k127_10554166_3 RNA recognition motif - - - 0.0000000000000000002137 94.0
DPH3_k127_10554166_4 - - - - 0.00004194 54.0
DPH3_k127_10559223_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 1.609e-207 652.0
DPH3_k127_10559223_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 372.0
DPH3_k127_10559223_2 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000002425 198.0
DPH3_k127_1056267_0 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 464.0
DPH3_k127_1056267_1 PFAM Carbohydrate-selective porin OprB K07267 - - 0.000000000000000000000000000000000000000003593 171.0
DPH3_k127_1056267_2 PFAM regulatory protein, ArsR K21903 - - 0.0000000000000000000000000000000000000006121 151.0
DPH3_k127_10562769_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 436.0
DPH3_k127_10574991_0 Protein of unknown function, DUF255 K06888 - - 1.493e-273 859.0
DPH3_k127_10574991_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 521.0
DPH3_k127_10574991_10 regulation of response to stimulus K02014,K13730 - - 0.000000000001436 78.0
DPH3_k127_10574991_11 Carboxypeptidase - - - 0.000008491 57.0
DPH3_k127_10574991_2 Oxidoreductase FAD-binding domain K00351 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 398.0
DPH3_k127_10574991_3 Rnf-Nqr subunit, membrane protein K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000002072 247.0
DPH3_k127_10574991_4 Rnf-Nqr subunit, membrane protein K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000001424 255.0
DPH3_k127_10574991_5 Belongs to the NqrB RnfD family K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000001241 242.0
DPH3_k127_10574991_6 Ferritin-like domain K02217 - 1.16.3.2 0.0000000000000000000000000000005328 123.0
DPH3_k127_10574991_7 - - - - 0.0000000000000000000000001792 114.0
DPH3_k127_10574991_8 Rubredoxin - - - 0.0000000000000000000000016 103.0
DPH3_k127_10574991_9 FMN binding K00348 - 1.6.5.8 0.00000000000000000000003093 114.0
DPH3_k127_10576531_0 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 362.0
DPH3_k127_10576531_1 COG1309 Transcriptional regulator - - - 0.0000000000002387 79.0
DPH3_k127_10576531_2 Iron-sulfur cluster-binding domain - - - 0.000005453 57.0
DPH3_k127_10590955_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain - - - 6.634e-215 679.0
DPH3_k127_10590955_1 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003434 263.0
DPH3_k127_10590955_2 thioesterase domain - - - 0.000001185 54.0
DPH3_k127_10591209_0 Beta-eliminating lyase K13017 - 2.6.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 506.0
DPH3_k127_10591209_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000008906 238.0
DPH3_k127_10591209_2 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000005353 215.0
DPH3_k127_10591209_3 Belongs to the FPP GGPP synthase family K00805,K02251,K02523,K21275 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.30,2.5.1.83,2.5.1.90 0.00000000007843 74.0
DPH3_k127_10612532_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 1.531e-200 640.0
DPH3_k127_10614848_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000008471 182.0
DPH3_k127_10615019_0 Pyridine nucleotide-disulphide oxidoreductase - - - 1.286e-203 660.0
DPH3_k127_10615019_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000007806 252.0
DPH3_k127_10615019_2 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000001771 170.0
DPH3_k127_10668632_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 0.000000000000000000000000000000000009159 147.0
DPH3_k127_10674193_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000002031 194.0
DPH3_k127_10674193_1 Bacterial regulatory proteins, tetR family - - - 0.000000000002349 75.0
DPH3_k127_10683003_0 Anthranilate synthase component I, N terminal region K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 296.0
DPH3_k127_10683003_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000001055 231.0
DPH3_k127_10700044_0 Glycosyl transferase family 21 K03669 - - 1.536e-248 786.0
DPH3_k127_10700044_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 5.992e-203 637.0
DPH3_k127_10700044_2 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 596.0
DPH3_k127_10700044_3 glycosyl transferase family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 400.0
DPH3_k127_10700044_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 394.0
DPH3_k127_10700044_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000001256 261.0
DPH3_k127_10700044_6 serine-type endopeptidase activity K08372 - - 0.000000000000000000000000000000000000000000000000000000000000000004956 239.0
DPH3_k127_10700044_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000003897 213.0
DPH3_k127_10700044_8 Peptidase family M48 - - - 0.000000000000000001043 94.0
DPH3_k127_10707442_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 1.62e-298 925.0
DPH3_k127_10707442_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 8.224e-225 700.0
DPH3_k127_10707442_2 subunit (C K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002262 282.0
DPH3_k127_10707442_3 Calcineurin-like phosphoesterase K07099 - - 0.00000000000000000000000000000000000000000000000000000000000002979 223.0
DPH3_k127_10707442_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000002976 190.0
DPH3_k127_10707442_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000000000000000000000000000000000000002698 172.0
DPH3_k127_10707442_6 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000001303 180.0
DPH3_k127_10732002_0 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 373.0
DPH3_k127_10732002_1 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004485 295.0
DPH3_k127_10735336_0 COG0405 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000002804 198.0
DPH3_k127_10735336_1 Serine aminopeptidase, S33 - - - 0.00000000000001168 78.0
DPH3_k127_10751980_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 354.0
DPH3_k127_10754331_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 505.0
DPH3_k127_10754331_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 348.0
DPH3_k127_10754331_10 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000002975 84.0
DPH3_k127_10754331_11 - - - - 0.0000000001991 64.0
DPH3_k127_10754331_12 Methyltransferase type 11 - - - 0.00009277 45.0
DPH3_k127_10754331_2 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 328.0
DPH3_k127_10754331_3 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000007044 275.0
DPH3_k127_10754331_4 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002462 254.0
DPH3_k127_10754331_5 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000000000107 169.0
DPH3_k127_10754331_6 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000005158 151.0
DPH3_k127_10754331_7 Protein of unknown function (DUF2750) - - - 0.00000000000000000000000000000000000005827 146.0
DPH3_k127_10754331_8 YGGT family K02221 - - 0.00000000000000000000000000000006337 128.0
DPH3_k127_10754331_9 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000005256 96.0
DPH3_k127_10775977_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000001514 260.0
DPH3_k127_10775977_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000001314 151.0
DPH3_k127_10775977_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000002778 138.0
DPH3_k127_10785704_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 304.0
DPH3_k127_10785704_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001396 258.0
DPH3_k127_10785704_2 PFAM conserved K02069 - - 0.00000000000000000000000000000000000000000007738 163.0
DPH3_k127_10785704_3 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.0000000000000000000000000000685 121.0
DPH3_k127_10799486_0 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 462.0
DPH3_k127_10799486_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000001349 192.0
DPH3_k127_10799486_2 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.000000000000000000000000000000000000000000000005123 180.0
DPH3_k127_10799486_3 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000000000000000001862 142.0
DPH3_k127_10799486_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000006084 142.0
DPH3_k127_10799486_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000004013 82.0
DPH3_k127_10803130_0 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007092 287.0
DPH3_k127_10803130_2 Tetratricopeptide repeat K14217 GO:0002376,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002831,GO:0002832,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0008104,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0010033,GO:0014070,GO:0015031,GO:0015833,GO:0019060,GO:0019221,GO:0023052,GO:0030581,GO:0031347,GO:0031348,GO:0032091,GO:0032101,GO:0032102,GO:0033036,GO:0034097,GO:0034340,GO:0034613,GO:0042221,GO:0042592,GO:0042886,GO:0043086,GO:0043207,GO:0043330,GO:0043331,GO:0043393,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0044092,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044766,GO:0045069,GO:0045070,GO:0045071,GO:0045087,GO:0045184,GO:0046719,GO:0046907,GO:0048518,GO:0048519,GO:0048524,GO:0048525,GO:0048583,GO:0048585,GO:0048878,GO:0050687,GO:0050688,GO:0050689,GO:0050691,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051095,GO:0051097,GO:0051098,GO:0051100,GO:0051179,GO:0051234,GO:0051336,GO:0051346,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051707,GO:0051708,GO:0051716,GO:0060337,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071357,GO:0071359,GO:0071360,GO:0071407,GO:0071702,GO:0071705,GO:0080134,GO:0097159,GO:1901363,GO:1901698,GO:1901699,GO:1902579,GO:1902581,GO:1902583,GO:1903900,GO:1903901,GO:1903902 - 0.0002322 53.0
DPH3_k127_10803130_3 (FHA) domain - - - 0.0003067 53.0
DPH3_k127_10804567_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.291e-256 805.0
DPH3_k127_10804567_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 604.0
DPH3_k127_10810694_0 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 393.0
DPH3_k127_10810694_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000002813 128.0
DPH3_k127_10810694_2 Flavin containing amine oxidoreductase - - - 0.000000001107 65.0
DPH3_k127_10815116_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 324.0
DPH3_k127_10815116_1 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000005348 103.0
DPH3_k127_10815116_2 PFAM transcription factor CarD K07736 - - 0.000000000002927 68.0
DPH3_k127_10815116_3 ThiS family K03636 - - 0.00000001556 60.0
DPH3_k127_10819646_0 Cysteine-rich domain K08264 - 1.8.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001469 277.0
DPH3_k127_10819646_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000006042 142.0
DPH3_k127_10819646_2 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.000000003189 71.0
DPH3_k127_10819646_3 Carotenoid biosynthesis protein K22502 - 5.5.1.19 0.00000003014 65.0
DPH3_k127_10845046_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 1.115e-265 833.0
DPH3_k127_10845046_1 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000001734 204.0
DPH3_k127_10848017_0 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 308.0
DPH3_k127_10848017_1 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.0000000000000000000000000001 117.0
DPH3_k127_10851726_0 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 520.0
DPH3_k127_10851726_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 389.0
DPH3_k127_10851726_2 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 288.0
DPH3_k127_10851726_3 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000002035 250.0
DPH3_k127_10851726_4 Glycosyltransferase family 87 - - - 0.000000000000000002183 98.0
DPH3_k127_10855655_0 hemolysin activation secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000004083 223.0
DPH3_k127_10855655_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000004804 183.0
DPH3_k127_1088035_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 386.0
DPH3_k127_1088035_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 310.0
DPH3_k127_10882062_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 385.0
DPH3_k127_10882062_1 (ABC) transporter K02021,K06147,K06148,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 372.0
DPH3_k127_10882062_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000001886 237.0
DPH3_k127_10882062_3 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000299 231.0
DPH3_k127_10882062_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000005651 200.0
DPH3_k127_10882062_5 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000007423 89.0
DPH3_k127_10882062_6 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000005502 68.0
DPH3_k127_10882096_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 321.0
DPH3_k127_10882096_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005363 258.0
DPH3_k127_10882096_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000001543 217.0
DPH3_k127_10888021_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 462.0
DPH3_k127_10888021_1 Protein of unknown function (DUF3795) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 283.0
DPH3_k127_10888021_2 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000005352 229.0
DPH3_k127_10888021_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000003327 127.0
DPH3_k127_10888021_4 PFAM response regulator receiver - - - 0.000000000000000000000000242 109.0
DPH3_k127_10888021_5 Bacterial transferase hexapeptide (six repeats) K02617 - - 0.0000000000000001886 82.0
DPH3_k127_10891024_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001979 248.0
DPH3_k127_10891024_1 signal peptide peptidase SppA K04773 - - 0.0000000000000000000000000000000000003964 147.0
DPH3_k127_10892425_0 - - - - 0.000000000000009921 87.0
DPH3_k127_10892425_1 Transposase - - - 0.00000000016 64.0
DPH3_k127_10892425_2 Carotenoid biosynthesis protein - - - 0.0000008305 59.0
DPH3_k127_10922545_0 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 325.0
DPH3_k127_10922545_1 Drug metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004919 295.0
DPH3_k127_10922545_2 PFAM D-aminoacylase K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000001951 177.0
DPH3_k127_10941590_0 Penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 297.0
DPH3_k127_10941590_1 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 280.0
DPH3_k127_10941590_2 Cobalamin B12-binding K01849 - 5.4.99.2 0.00000000000000000000000000000000000000002544 158.0
DPH3_k127_10941943_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001997 281.0
DPH3_k127_10941943_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000007821 106.0
DPH3_k127_10947269_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.739e-221 702.0
DPH3_k127_10947269_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 343.0
DPH3_k127_10947269_2 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000003485 192.0
DPH3_k127_10947269_3 ABC-2 family transporter protein - - - 0.00000000000000000000006415 109.0
DPH3_k127_10947269_4 Bacterial DNA-binding protein K03530 - - 0.0000000000000000000002948 102.0
DPH3_k127_10947269_5 outer membrane efflux protein K12340 - - 0.0000000000000000006347 99.0
DPH3_k127_1098243_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.477e-287 906.0
DPH3_k127_1098243_1 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 447.0
DPH3_k127_1098243_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 399.0
DPH3_k127_1098243_3 Tyrosine recombinase XerD K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 293.0
DPH3_k127_10996933_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 5.772e-195 612.0
DPH3_k127_10996933_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000124 136.0
DPH3_k127_10996933_2 PFAM cytochrome c class III - - - 0.000000000000000000004703 98.0
DPH3_k127_1100048_0 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003887 243.0
DPH3_k127_1100048_1 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000002328 225.0
DPH3_k127_1100048_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000002491 55.0
DPH3_k127_1100048_3 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.00006146 55.0
DPH3_k127_11010430_0 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 295.0
DPH3_k127_11010430_1 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000271 124.0
DPH3_k127_11010430_2 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000000000000006405 91.0
DPH3_k127_11046707_0 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001092 285.0
DPH3_k127_11046707_1 NAD(P)-binding Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002332 259.0
DPH3_k127_11046707_3 Domain of unknown function (DUF4143) - - - 0.00000000000000000005189 91.0
DPH3_k127_11052065_0 SMART alpha amylase catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001872 252.0
DPH3_k127_11052065_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000003777 231.0
DPH3_k127_11052065_2 TIGRFAM methyltransferase cognate corrinoid proteins, Methanosarcina family K00548 - 2.1.1.13 0.0000000000000000000000000001726 117.0
DPH3_k127_11071067_0 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 373.0
DPH3_k127_11071067_1 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000001079 187.0
DPH3_k127_11071067_2 Fe-S oxidoreductase - - - 0.000000000000000001305 94.0
DPH3_k127_11071067_3 Electron transfer flavoprotein K03521 - - 0.000000000000000004558 95.0
DPH3_k127_11124859_0 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 411.0
DPH3_k127_11124859_1 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000004904 164.0
DPH3_k127_11131073_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000002677 199.0
DPH3_k127_11131073_1 Forkhead associated domain - - - 0.00000000000000000000000003874 125.0
DPH3_k127_11131073_2 - - - - 0.00000000000000000000000004333 120.0
DPH3_k127_11154304_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.448e-272 852.0
DPH3_k127_11154304_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 585.0
DPH3_k127_11154304_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 299.0
DPH3_k127_11154304_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001429 281.0
DPH3_k127_11154304_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000001242 267.0
DPH3_k127_11154304_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000004146 117.0
DPH3_k127_11154304_6 PFAM YbbR family protein - - - 0.0000000002297 71.0
DPH3_k127_11166241_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 450.0
DPH3_k127_11166241_1 Electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 316.0
DPH3_k127_11166241_2 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000003369 199.0
DPH3_k127_11166241_3 PFAM LmbE family protein - - - 0.00000778 57.0
DPH3_k127_11166269_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 329.0
DPH3_k127_11166269_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003271 256.0
DPH3_k127_11166269_2 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000002495 105.0
DPH3_k127_11198546_0 TIGRFAM leucyl-tRNA synthetase K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.646e-292 908.0
DPH3_k127_11198546_1 Transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.00000000000000000000000000005979 123.0
DPH3_k127_11198546_2 Hexapeptide repeat of succinyl-transferase K00633 - 2.3.1.18 0.00000000000000000000000007537 115.0
DPH3_k127_11214048_0 Protein of unknown function (DUF3024) - - - 0.000000000000000000000000000000000008333 139.0
DPH3_k127_11214048_2 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.00008661 46.0
DPH3_k127_11216794_0 PFAM AMP-dependent synthetase and ligase K18661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 447.0
DPH3_k127_11216794_1 COG1363 Cellulase M and related proteins - - - 0.0000000000000000000000000000000000002832 143.0
DPH3_k127_11233506_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 561.0
DPH3_k127_11233506_1 Sodium:neurotransmitter symporter family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 453.0
DPH3_k127_11233506_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 407.0
DPH3_k127_11233506_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.000000000000000000000001946 104.0
DPH3_k127_11233506_4 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000006461 70.0
DPH3_k127_11233506_5 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.0007132 48.0
DPH3_k127_11256970_0 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005903 283.0
DPH3_k127_11256970_1 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000128 132.0
DPH3_k127_1126325_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.382e-272 846.0
DPH3_k127_1126325_1 META domain - - - 0.0000000000000283 79.0
DPH3_k127_11283676_0 AMP-binding enzyme C-terminal domain K00666,K12508 - 6.2.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 543.0
DPH3_k127_11283676_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006329 279.0
DPH3_k127_11301254_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 554.0
DPH3_k127_11301254_1 Saccharopine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 540.0
DPH3_k127_11301254_2 PFAM NADPH-dependent FMN reductase - - - 0.0000001656 58.0
DPH3_k127_11310562_0 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 353.0
DPH3_k127_1131833_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000001422 171.0
DPH3_k127_1131833_1 Universal stress protein family - - - 0.00000000000000000000000000000003373 128.0
DPH3_k127_11319301_0 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
DPH3_k127_11319301_1 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000219 138.0
DPH3_k127_11327051_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.185e-236 757.0
DPH3_k127_11327051_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 447.0
DPH3_k127_11327051_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000004886 216.0
DPH3_k127_11327051_3 RimP C-terminal SH3 domain K09748 - - 0.0000000000000000000000000000000008294 137.0
DPH3_k127_11327051_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000001792 109.0
DPH3_k127_11327051_5 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000002604 92.0
DPH3_k127_11327051_6 Protein of unknown function (DUF448) K07742 - - 0.00000002126 63.0
DPH3_k127_11332812_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 511.0
DPH3_k127_11332812_1 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000007554 213.0
DPH3_k127_11332812_2 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000004289 209.0
DPH3_k127_11355807_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000004557 205.0
DPH3_k127_11355807_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000003899 164.0
DPH3_k127_11355807_2 MlaC protein K07323 - - 0.0000000001773 70.0
DPH3_k127_11361717_0 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005725 273.0
DPH3_k127_11361717_1 LUD domain - - - 0.0000000000000000000000000000000000000000000000000000000001088 210.0
DPH3_k127_11382649_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 542.0
DPH3_k127_11382649_1 2Fe-2S iron-sulfur cluster binding domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 434.0
DPH3_k127_11382649_2 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.0000000000000000000000000000000000002457 141.0
DPH3_k127_11387246_0 - - - - 2.069e-263 822.0
DPH3_k127_11387246_1 COGs COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase K16786,K16787 - - 0.0000000000000000000000001541 119.0
DPH3_k127_11387246_2 Transcriptional regulator K02019,K05772 - - 0.000000000000000000000001285 111.0
DPH3_k127_11387246_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000384 72.0
DPH3_k127_11387246_4 ABC transporter, ATP-binding protein K13409 - - 0.0000005522 59.0
DPH3_k127_11387246_5 - - - - 0.00005815 53.0
DPH3_k127_11387246_6 ORF6N domain - - - 0.000307 45.0
DPH3_k127_114405_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 292.0
DPH3_k127_114405_1 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000001378 229.0
DPH3_k127_11442789_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 572.0
DPH3_k127_11442789_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 321.0
DPH3_k127_11442789_2 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000002691 218.0
DPH3_k127_11442789_3 PFAM Phosphoglycerate mutase - - - 0.00000000000000000000000000000000000000000000001252 179.0
DPH3_k127_11460509_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 8.474e-251 796.0
DPH3_k127_11460509_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003664 292.0
DPH3_k127_11460509_2 Putative regulatory protein - - - 0.0001398 49.0
DPH3_k127_11467859_0 ABC transporter K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 313.0
DPH3_k127_11471285_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 402.0
DPH3_k127_11471285_1 polysaccharide deacetylase - - - 0.00000000002398 73.0
DPH3_k127_11484337_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0000018,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0071944,GO:0080090 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 580.0
DPH3_k127_11484337_1 Belongs to the P-Pant transferase superfamily K02362 - 6.3.2.14 0.000000000000000000000000000000000000000000000000000000004615 207.0
DPH3_k127_11484337_2 ATPase binding K03600,K09985 GO:0000502,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0009376,GO:0009893,GO:0009894,GO:0009896,GO:0010604,GO:0019222,GO:0019899,GO:0031597,GO:0032781,GO:0032991,GO:0042176,GO:0042802,GO:0042803,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045732,GO:0046983,GO:0048518,GO:0050789,GO:0050790,GO:0051117,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:1901363,GO:1902494,GO:1904949,GO:1905368,GO:1905369,GO:1990904 - 0.00000000000000000005902 100.0
DPH3_k127_11515184_0 2-hydroxyglutaryl-CoA dehydratase, D-component K04112,K20904 - 1.3.7.8,4.2.1.167 0.00000000000000000000000000000000000000000000000000000000004084 220.0
DPH3_k127_11525886_0 Zinc-uptake complex component A periplasmic K02077 - - 0.000000000000000000000000000000000000000000000000000000000002117 220.0
DPH3_k127_11525886_1 COG1121 ABC-type Mn Zn transport systems ATPase component K11607,K11710 - - 0.0000000000000000000000000000000000000000000000003678 183.0
DPH3_k127_11525886_2 phosphate-selective porin O and P - - - 0.0000000262 63.0
DPH3_k127_11527846_0 Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003592 276.0
DPH3_k127_11542209_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 328.0
DPH3_k127_11542209_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 295.0
DPH3_k127_11542209_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 278.0
DPH3_k127_11542209_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000003019 70.0
DPH3_k127_11572027_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 460.0
DPH3_k127_11577362_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase K02182 - 6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 541.0
DPH3_k127_11577362_1 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 380.0
DPH3_k127_11577362_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 358.0
DPH3_k127_11577362_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 330.0
DPH3_k127_11577362_4 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000005564 262.0
DPH3_k127_11577362_5 lipoyl(octanoyl) transferase activity K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000000000000007437 211.0
DPH3_k127_11577362_6 Sulfatase - - - 0.0000000000000000000000000000000000000001573 159.0
DPH3_k127_1159202_0 Elongator protein 3, MiaB family, Radical SAM K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000005675 257.0
DPH3_k127_1159202_1 Transcriptional regulator, TetR Family - - - 0.000000000000002276 85.0
DPH3_k127_1159202_2 Alpha beta hydrolase K01563 - 3.8.1.5 0.00000000116 61.0
DPH3_k127_11677327_0 flavin adenine dinucleotide binding K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007819 286.0
DPH3_k127_11677327_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000006206 256.0
DPH3_k127_11684287_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 395.0
DPH3_k127_11684287_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 362.0
DPH3_k127_11684287_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000009274 244.0
DPH3_k127_11684287_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000259 201.0
DPH3_k127_11684287_4 - - - - 0.00000000000000000000000006428 108.0
DPH3_k127_11688658_0 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000009959 190.0
DPH3_k127_11688658_1 - - - - 0.0000000006695 65.0
DPH3_k127_11696833_0 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 344.0
DPH3_k127_11696833_1 Protein of unknown function (DUF3467) - - - 0.000000000000000000001682 96.0
DPH3_k127_11696833_2 AAA domain - - - 0.0009684 46.0
DPH3_k127_1170972_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 439.0
DPH3_k127_1170972_1 protein (ATP-grasp superfamily) K07159 - - 0.000000000000000000000000000000001872 138.0
DPH3_k127_11723020_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.887e-204 649.0
DPH3_k127_11723020_1 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 302.0
DPH3_k127_11729538_0 Belongs to the RtcB family K14415 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 576.0
DPH3_k127_11729538_1 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.000000000002945 68.0
DPH3_k127_11731053_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K18847 - 2.1.2.1,2.2.1.8 9.511e-197 621.0
DPH3_k127_11731053_1 anthranilate synthase, component K01657,K01665,K13503,K13950 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 417.0
DPH3_k127_11731053_2 unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 374.0
DPH3_k127_11731053_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664,K13497 - 2.4.2.18,2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000001939 230.0
DPH3_k127_11731053_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000001982 163.0
DPH3_k127_11731053_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000001313 157.0
DPH3_k127_11731053_6 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000006321 137.0
DPH3_k127_11769889_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.401e-198 634.0
DPH3_k127_11769889_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 308.0
DPH3_k127_11771840_0 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha- epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl- CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex) K00192,K00193 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 361.0
DPH3_k127_11771840_1 Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase K00192 - 1.2.7.4 0.00000000000000000000000000000000000000000002084 171.0
DPH3_k127_11771840_2 acetyl-CoA catabolic process - - - 0.0000000000000000000000000000000008703 135.0
DPH3_k127_11771840_3 - K00201 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.00000000000000000000000004933 124.0
DPH3_k127_11771840_4 Amidohydrolase family K00200 - 1.2.7.12 0.00000003499 65.0
DPH3_k127_11772358_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000001817 196.0
DPH3_k127_11776259_0 PFAM FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region, Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, Rhodanese-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 594.0
DPH3_k127_11776259_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000001254 238.0
DPH3_k127_11776259_2 Family of unknown function (DUF5320) - - - 0.0000000000000000000149 95.0
DPH3_k127_11787748_0 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 437.0
DPH3_k127_11787748_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 376.0
DPH3_k127_11787748_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10912 GO:0000156,GO:0000160,GO:0003674,GO:0003700,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 337.0
DPH3_k127_11787748_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000005776 128.0
DPH3_k127_11787748_4 type IV pilus assembly PilZ - - - 0.0000000000000000000003684 113.0
DPH3_k127_1179557_0 Sigma-54 interaction domain K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 304.0
DPH3_k127_1179557_1 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000004236 63.0
DPH3_k127_1179557_2 general secretion pathway protein G K02456 - - 0.0000000004519 73.0
DPH3_k127_1179557_3 pyruvate phosphate dikinase K01007 - 2.7.9.2 0.0000001361 61.0
DPH3_k127_1179557_4 energy transducer activity K03832 - - 0.0007 43.0
DPH3_k127_11801943_0 PFAM ABC transporter related K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001209 285.0
DPH3_k127_11801943_1 Binding-protein-dependent transport system inner membrane component K02025,K10118 - - 0.00000000000000000000000000000000000000000000000001596 191.0
DPH3_k127_11801943_2 Sugar ABC transporter permease K15772 - - 0.000000000000000000000000000000000000003526 165.0
DPH3_k127_11819456_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001937 238.0
DPH3_k127_11819456_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000001455 135.0
DPH3_k127_11819456_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000273 103.0
DPH3_k127_11819456_3 positive regulation of macromolecule biosynthetic process K03973 - - 0.000000000000000004248 88.0
DPH3_k127_11837130_0 Amidohydrolase - - - 0.000000000000000000000000000000002332 142.0
DPH3_k127_11837130_1 Transposase zinc-binding domain - - - 0.000000000000000003006 91.0
DPH3_k127_11837130_2 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000001822 79.0
DPH3_k127_11837130_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000001273 72.0
DPH3_k127_11839778_0 Nitronate monooxygenase - - - 3.296e-211 670.0
DPH3_k127_11839778_1 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 480.0
DPH3_k127_11839778_2 Phosphopantetheine attachment site - - - 0.0000000000000000001547 91.0
DPH3_k127_11839778_3 Protein of unknown function, DUF488 - - - 0.0000002 52.0
DPH3_k127_11844972_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 601.0
DPH3_k127_11844972_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 331.0
DPH3_k127_11844972_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000001603 236.0
DPH3_k127_11844972_3 Belongs to the 'phage' integrase family K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000004447 114.0
DPH3_k127_11874678_0 PFAM UDP-glucose GDP-mannose dehydrogenase K02474,K13015 - 1.1.1.136 1.665e-278 869.0
DPH3_k127_11874678_1 Acyl-CoA dehydrogenase N terminal K09456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 623.0
DPH3_k127_11874678_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 444.0
DPH3_k127_11874678_3 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005863 282.0
DPH3_k127_11874678_4 - - - - 0.00000000000000000000000000000000000000000001598 175.0
DPH3_k127_11874678_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000002238 87.0
DPH3_k127_11874678_6 Endonuclease containing a URI domain K07461 - - 0.0000000000000005018 78.0
DPH3_k127_11899112_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009739 435.0
DPH3_k127_11899112_1 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 364.0
DPH3_k127_11899112_2 Tetratricopeptide repeat - - - 0.000002852 61.0
DPH3_k127_11922847_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 555.0
DPH3_k127_11922847_1 Subtilase family - - - 0.0000000000000000000000000000000000005603 151.0
DPH3_k127_11922847_2 denitrification pathway K02569,K15876 - - 0.0000000000000001757 89.0
DPH3_k127_11924955_0 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000000004418 180.0
DPH3_k127_11924955_1 MAP kinase kinase kinase activity - GO:0000165,GO:0000166,GO:0000186,GO:0000226,GO:0000935,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004709,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010225,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030428,GO:0030554,GO:0030587,GO:0030865,GO:0031098,GO:0031122,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0032147,GO:0032153,GO:0032155,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032268,GO:0032270,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032872,GO:0032874,GO:0033043,GO:0033044,GO:0033554,GO:0033674,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0042325,GO:0042327,GO:0042981,GO:0043067,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043549,GO:0043622,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0045860,GO:0045935,GO:0045937,GO:0046328,GO:0046330,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051972,GO:0051973,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070302,GO:0070304,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090702,GO:0097159,GO:0097367,GO:0097435,GO:0099120,GO:0099568,GO:0140096,GO:1900744,GO:1900745,GO:1901265,GO:1901363,GO:1901564,GO:1902531,GO:1902533,GO:1904353,GO:1904355,GO:1904356,GO:1904358,GO:2000112,GO:2000278,GO:2000573,GO:2001252 - 0.0005852 51.0
DPH3_k127_11941756_0 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000001082 185.0
DPH3_k127_11941756_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000001118 94.0
DPH3_k127_11941756_2 Tetratricopeptide repeat - - - 0.000000000000000001013 100.0
DPH3_k127_11941756_3 Tetratricopeptide repeats - - - 0.00000000001074 77.0
DPH3_k127_11941756_4 Psort location Cytoplasmic, score 8.96 - - - 0.00004683 51.0
DPH3_k127_11969071_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000006225 197.0
DPH3_k127_11969071_1 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.0000000000000000000000000000000000000000000000005757 184.0
DPH3_k127_11969071_2 Signal transduction histidine kinase - - - 0.000000000000000001232 89.0
DPH3_k127_11998879_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 553.0
DPH3_k127_11998879_1 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 423.0
DPH3_k127_11998879_2 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 424.0
DPH3_k127_11998879_3 succinate dehydrogenase K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 379.0
DPH3_k127_11998879_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000002358 145.0
DPH3_k127_1201198_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 543.0
DPH3_k127_1201198_1 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 397.0
DPH3_k127_1201198_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000003139 215.0
DPH3_k127_1201198_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000003608 117.0
DPH3_k127_12029918_0 COG2084 3-hydroxyisobutyrate dehydrogenase and related K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 489.0
DPH3_k127_12029918_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 482.0
DPH3_k127_12029918_2 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003399 285.0
DPH3_k127_12029918_3 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000008281 125.0
DPH3_k127_12029918_4 Domain of unknown function (DUF4082) - - - 0.0001474 50.0
DPH3_k127_12042967_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 553.0
DPH3_k127_12042967_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000003543 90.0
DPH3_k127_12055057_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 471.0
DPH3_k127_12055057_1 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 326.0
DPH3_k127_12069964_0 Thrombospondin type 3 repeat K03286 - - 0.000000000000000000000000000000000000000000000000000000000002689 219.0
DPH3_k127_12069964_1 PIN domain K07064 - - 0.000000000000000000000000000000000000000001128 162.0
DPH3_k127_12070740_0 PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 290.0
DPH3_k127_12070740_1 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes K00627 - 2.3.1.12 0.0000000000000000000000000000000000003225 144.0
DPH3_k127_12070740_2 - - - - 0.0001765 46.0
DPH3_k127_12072225_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 592.0
DPH3_k127_12072225_1 ferredoxin-NADP+ reductase activity K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 400.0
DPH3_k127_12072225_2 Type II IV secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 391.0
DPH3_k127_12072225_3 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 380.0
DPH3_k127_12072225_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000001992 198.0
DPH3_k127_1208100_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001902 282.0
DPH3_k127_1208100_1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000202 266.0
DPH3_k127_1208100_2 PFAM Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000008524 157.0
DPH3_k127_1208100_3 oligosaccharyl transferase activity - - - 0.00000000000000000000001222 115.0
DPH3_k127_12084326_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 485.0
DPH3_k127_12084326_1 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000003391 190.0
DPH3_k127_12084326_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000007026 109.0
DPH3_k127_12084326_4 Sterol carrier protein - - - 0.000000000000001183 81.0
DPH3_k127_12114574_0 sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 397.0
DPH3_k127_12114574_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000001796 102.0
DPH3_k127_12114574_2 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000009512 101.0
DPH3_k127_12134166_0 PFAM Carbamoyltransferase K00612 - - 1.969e-265 833.0
DPH3_k127_12134166_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 594.0
DPH3_k127_12134166_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 567.0
DPH3_k127_12134166_3 Evidence 2b Function of strongly homologous gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 434.0
DPH3_k127_12134166_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 312.0
DPH3_k127_12134166_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000000000002044 189.0
DPH3_k127_12134166_7 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000003696 92.0
DPH3_k127_12134166_8 - - - - 0.000000000001937 69.0
DPH3_k127_12136503_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000001378 257.0
DPH3_k127_12136503_1 EthD domain - - - 0.00000000000000002064 92.0
DPH3_k127_12136503_2 EthD domain - - - 0.00000000000000002792 92.0
DPH3_k127_12151107_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000007529 252.0
DPH3_k127_12151107_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000001638 151.0
DPH3_k127_12151107_2 - - - - 0.0000001896 59.0
DPH3_k127_12191353_0 Sodium Bile acid symporter family K03325 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656 - 4.786e-203 637.0
DPH3_k127_12191353_1 Alanine racemase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 353.0
DPH3_k127_12191353_2 PFAM Radical SAM K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 294.0
DPH3_k127_12191353_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001491 246.0
DPH3_k127_12191353_4 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000005477 247.0
DPH3_k127_12191353_5 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000009966 201.0
DPH3_k127_12191353_6 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000006968 156.0
DPH3_k127_12191353_7 Helix-turn-helix domain K03892,K21903 - - 0.000000000000000000000000008027 114.0
DPH3_k127_12195793_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 456.0
DPH3_k127_12195793_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 449.0
DPH3_k127_12224218_0 PFAM aminoglycoside phosphotransferase K04343 - 2.7.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000001962 258.0
DPH3_k127_12224218_1 ATPase associated with various cellular activities - - - 0.0000000000000000000000000000000000000002328 160.0
DPH3_k127_12230970_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 352.0
DPH3_k127_12230970_1 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000001072 196.0
DPH3_k127_12230970_2 - - - - 0.00000000000000000004286 101.0
DPH3_k127_12234037_0 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 552.0
DPH3_k127_12234037_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 481.0
DPH3_k127_12234037_2 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 444.0
DPH3_k127_12234037_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 404.0
DPH3_k127_12234037_4 abc-type fe3 -hydroxamate transport system, periplasmic component K02016,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 406.0
DPH3_k127_12234037_5 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 381.0
DPH3_k127_12234037_8 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 329.0
DPH3_k127_12234037_9 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 321.0
DPH3_k127_12236874_0 PFAM major facilitator superfamily MFS_1 K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 455.0
DPH3_k127_12236874_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 344.0
DPH3_k127_12236874_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000001391 155.0
DPH3_k127_12236874_3 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000002156 128.0
DPH3_k127_12238801_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000414 284.0
DPH3_k127_12238801_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000001618 235.0
DPH3_k127_12238801_2 - - - - 0.000000000000000000000001849 109.0
DPH3_k127_12244117_0 Aminotransferase class-III K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 536.0
DPH3_k127_12244117_1 diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 343.0
DPH3_k127_12244117_2 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 333.0
DPH3_k127_12244117_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 325.0
DPH3_k127_12244117_4 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) K03707 - 3.5.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008136 276.0
DPH3_k127_12244117_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003735 263.0
DPH3_k127_12244117_6 Belongs to the GST superfamily K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000003028 174.0
DPH3_k127_12244117_7 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000007358 74.0
DPH3_k127_12245448_0 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000148 196.0
DPH3_k127_12245448_1 - - - - 0.0000000000000000000000000000000000000001864 168.0
DPH3_k127_12264970_0 PFAM Acyl-CoA dehydrogenase K09456 - - 0.0000000000000000000000000000000000000000000000000004759 190.0
DPH3_k127_12264970_1 Molybdopterin guanine dinucleotide synthesis protein B K03753 - - 0.0000000000001647 76.0
DPH3_k127_1228402_0 Transcriptional regulatory protein, C terminal K07669,K07672 - - 0.000000000000005419 83.0
DPH3_k127_12285175_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 446.0
DPH3_k127_12285175_1 SecD/SecF GG Motif K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 344.0
DPH3_k127_12285175_2 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000602 90.0
DPH3_k127_12299580_0 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008097 284.0
DPH3_k127_12299580_1 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000002729 227.0
DPH3_k127_12299580_2 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000002108 211.0
DPH3_k127_12299580_3 PFAM NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000001951 185.0
DPH3_k127_12299580_4 Protein of unknown function (DUF1161) - - - 0.00000000000000006792 84.0
DPH3_k127_12299580_5 Transposase - - - 0.0000000005971 63.0
DPH3_k127_12299580_6 Belongs to the heat shock protein 70 family - - - 0.0000000007864 63.0
DPH3_k127_12299580_8 Ami_3 K01448 - 3.5.1.28 0.0001472 51.0
DPH3_k127_12300414_0 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000003217 231.0
DPH3_k127_12300414_1 - - - - 0.00000000000000000000000000000000000004569 151.0
DPH3_k127_12300414_2 PFAM Plasmid stabilisation system K06218 - - 0.000000000000000000000003928 104.0
DPH3_k127_12300414_3 - - - - 0.0000000000004776 71.0
DPH3_k127_12300414_4 - - - - 0.0000000000007919 71.0
DPH3_k127_12300414_5 - - - - 0.00000000002393 72.0
DPH3_k127_12300414_6 Protein of unknown function (DUF2997) - - - 0.0002418 49.0
DPH3_k127_12320361_0 PFAM secretion protein HlyD family protein K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007528 252.0
DPH3_k127_12320361_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000006076 238.0
DPH3_k127_12320361_3 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000000000343 119.0
DPH3_k127_12320361_4 Transposase - - - 0.0000000000000000002611 94.0
DPH3_k127_12320361_5 Transposase K07494 - - 0.00000001923 62.0
DPH3_k127_12320361_6 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.000001146 58.0
DPH3_k127_12320361_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00007463 45.0
DPH3_k127_12320361_8 SpoVT / AbrB like domain - - - 0.0000879 45.0
DPH3_k127_12334167_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 361.0
DPH3_k127_12334167_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 302.0
DPH3_k127_12334167_2 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 304.0
DPH3_k127_12334167_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000001805 182.0
DPH3_k127_12334167_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000001085 148.0
DPH3_k127_12334167_5 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000131 102.0
DPH3_k127_12353206_0 SpoVR family K06415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 302.0
DPH3_k127_12362309_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 323.0
DPH3_k127_12362309_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000002534 178.0
DPH3_k127_12362309_2 - - - - 0.0002735 54.0
DPH3_k127_12373912_0 asparagine synthase K01953 - 6.3.5.4 2.165e-242 766.0
DPH3_k127_12373912_1 NAD synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 432.0
DPH3_k127_12373912_2 PFAM transposase IS116 IS110 IS902 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 358.0
DPH3_k127_12373912_3 protein involved in exopolysaccharide biosynthesis K16554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008678 255.0
DPH3_k127_12373912_4 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000001829 214.0
DPH3_k127_12373912_5 Cupin domain - - - 0.00000000000000000000000001168 118.0
DPH3_k127_12389155_0 UPF0210 protein K09157 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 550.0
DPH3_k127_12389155_1 COG0695 glutaredoxin and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 298.0
DPH3_k127_12389155_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000001137 221.0
DPH3_k127_12389155_3 Belongs to the UPF0237 family K07166 - - 0.000000000000000000000001728 106.0
DPH3_k127_12389155_4 PDZ DHR GLGF domain protein - - - 0.000000308 53.0
DPH3_k127_12389155_5 Serine threonine-protein kinase K08857 - 2.7.11.1 0.000000837 61.0
DPH3_k127_12425905_0 carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 546.0
DPH3_k127_12425905_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 435.0
DPH3_k127_12425905_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 300.0
DPH3_k127_12425905_3 conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000000009105 165.0
DPH3_k127_12425905_4 Amidohydrolase - - - 0.000000000000000000000000000000000000002781 166.0
DPH3_k127_12425905_5 - - - - 0.0000000003037 66.0
DPH3_k127_12429868_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.653e-224 707.0
DPH3_k127_12429868_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000005761 219.0
DPH3_k127_12429868_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000002422 203.0
DPH3_k127_12429868_3 - - - - 0.00000000000000000000000000000000000000000000000007652 186.0
DPH3_k127_12429868_4 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000004337 162.0
DPH3_k127_12430647_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001938 248.0
DPH3_k127_12430647_1 PFAM Cyclic nucleotide-binding K01420,K21563 - - 0.00000000000000000000000000000000000000000000000000000003401 204.0
DPH3_k127_12430647_2 CAAX protease self-immunity K07052 - - 0.00000000002537 77.0
DPH3_k127_12430647_3 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.00001053 49.0
DPH3_k127_12431731_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 292.0
DPH3_k127_12431731_1 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001167 241.0
DPH3_k127_12431731_2 Shikimate kinase K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000005106 175.0
DPH3_k127_12431731_3 SMART AAA ATPase K02450 - - 0.0000000000004187 73.0
DPH3_k127_12431731_4 PFAM regulatory protein, MarR - - - 0.00000000002391 73.0
DPH3_k127_12431731_5 Type II secretion system protein B K02451 - - 0.000006487 58.0
DPH3_k127_12433016_0 Transmembrane and TPR repeat-containing protein - GO:0001763,GO:0002009,GO:0003401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0012505,GO:0019222,GO:0030154,GO:0030162,GO:0030323,GO:0030324,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0035239,GO:0035295,GO:0040007,GO:0042176,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048286,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048729,GO:0048731,GO:0048747,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051146,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0055001,GO:0055002,GO:0060255,GO:0060425,GO:0060429,GO:0060441,GO:0060447,GO:0060541,GO:0060560,GO:0060562,GO:0060602,GO:0061061,GO:0061136,GO:0061138,GO:0065007,GO:0080090,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364 - 0.000000000001939 81.0
DPH3_k127_12449136_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000002264 203.0
DPH3_k127_12449136_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000003099 194.0
DPH3_k127_12449136_2 PFAM transferase hexapeptide repeat containing protein K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000006513 163.0
DPH3_k127_12449136_3 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000003137 159.0
DPH3_k127_12450229_0 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 319.0
DPH3_k127_12450229_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K02169,K02170,K08680,K10216,K15756,K16264 - 2.1.1.197,3.1.1.85,3.7.1.13,3.7.1.9,4.2.99.20 0.0000000000000000000000000000000000000000000000000000000000000003886 231.0
DPH3_k127_12450229_2 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000002303 146.0
DPH3_k127_12482110_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 372.0
DPH3_k127_12482110_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000001279 258.0
DPH3_k127_12482380_0 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 554.0
DPH3_k127_12482380_1 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 325.0
DPH3_k127_12482380_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 316.0
DPH3_k127_12482380_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001229 285.0
DPH3_k127_12482380_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002487 280.0
DPH3_k127_12482380_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588,K01945 - 5.4.99.18,6.3.4.13 0.000000000000000000000000000000000000000000000000000001168 197.0
DPH3_k127_12482380_6 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000007638 184.0
DPH3_k127_12482380_7 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000006435 175.0
DPH3_k127_12482380_8 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000001036 179.0
DPH3_k127_12482380_9 Telomere recombination K07566 - 2.7.7.87 0.0000000000002119 72.0
DPH3_k127_12486153_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
DPH3_k127_12486153_1 radical SAM domain protein K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 306.0
DPH3_k127_12486153_2 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002401 254.0
DPH3_k127_12486153_3 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000001196 208.0
DPH3_k127_12486153_4 COG1233 Phytoene dehydrogenase and related proteins K09835 - 5.2.1.13 0.0000000000000000000000000000000000000000000004205 182.0
DPH3_k127_12486153_5 geranylgeranyl reductase activity K10960,K17830 - 1.3.1.101,1.3.1.111,1.3.1.83,1.3.7.11 0.00000000000000000000000000000000000000000000626 179.0
DPH3_k127_1254082_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 500.0
DPH3_k127_1254082_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 346.0
DPH3_k127_1254082_2 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000006084 161.0
DPH3_k127_1254082_3 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.000000000000000000000000000000000265 132.0
DPH3_k127_1254082_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000008983 113.0
DPH3_k127_1254082_5 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000004489 96.0
DPH3_k127_12547598_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.62e-217 686.0
DPH3_k127_12547598_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 309.0
DPH3_k127_12547598_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000007643 269.0
DPH3_k127_12547598_3 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.00000000000000000000000000000000000000000000000001456 197.0
DPH3_k127_12547598_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000006398 182.0
DPH3_k127_12565056_0 Peptidase family M28 - - - 0.000000000000000000000431 110.0
DPH3_k127_12565056_1 methyltransferase K16648 - - 0.0000000001439 63.0
DPH3_k127_12579130_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 568.0
DPH3_k127_12579130_1 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 469.0
DPH3_k127_12579130_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 382.0
DPH3_k127_12579130_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000006016 86.0
DPH3_k127_12591950_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 431.0
DPH3_k127_12591950_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 443.0
DPH3_k127_12591950_2 GGDEF domain K19693 - - 0.000000000000000000001964 99.0
DPH3_k127_12591950_3 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000003359 108.0
DPH3_k127_1261763_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 351.0
DPH3_k127_1261763_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000546 278.0
DPH3_k127_1261763_2 endonuclease III K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002672 265.0
DPH3_k127_1261763_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
DPH3_k127_1261763_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000008045 192.0
DPH3_k127_1261763_5 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000001711 148.0
DPH3_k127_1261763_6 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.0000000000000000000000000000001006 130.0
DPH3_k127_1261763_8 von Willebrand factor, type A K07114 - - 0.0000003624 62.0
DPH3_k127_12649356_0 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 461.0
DPH3_k127_12649356_1 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000367 224.0
DPH3_k127_12649356_2 PFAM Amino acid-binding ACT - - - 0.0000000000000000000000000000000000000000000000000002044 189.0
DPH3_k127_12649356_3 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000001326 84.0
DPH3_k127_12649356_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000001131 56.0
DPH3_k127_12669555_0 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 431.0
DPH3_k127_12669555_1 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 392.0
DPH3_k127_12669555_2 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000008817 98.0
DPH3_k127_12676392_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 5.947e-205 674.0
DPH3_k127_12676392_1 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 527.0
DPH3_k127_12676392_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
DPH3_k127_12676392_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 289.0
DPH3_k127_12676392_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000002359 188.0
DPH3_k127_12676392_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000001374 139.0
DPH3_k127_12676392_6 Putative heavy-metal chelation - - - 0.000000000000005388 78.0
DPH3_k127_12694337_0 Cysteine-rich domain K08264 - 1.8.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 423.0
DPH3_k127_12694337_1 Fe-S oxidoreductase - - - 0.000000000000000001824 98.0
DPH3_k127_1271839_0 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 0.0 1022.0
DPH3_k127_1271839_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 448.0
DPH3_k127_1271839_2 NUDIX domain - - - 0.000000000000000007257 83.0
DPH3_k127_12723137_0 Arylsulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007984 384.0
DPH3_k127_12723137_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000002471 198.0
DPH3_k127_12739308_0 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 504.0
DPH3_k127_12739308_1 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.000000000000000000003433 100.0
DPH3_k127_12741641_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003413 271.0
DPH3_k127_12741641_1 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000003284 186.0
DPH3_k127_12741641_2 Domain of unknown function (DUF374) - - - 0.00000000003386 68.0
DPH3_k127_12747210_0 PFAM Radical SAM superfamily K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 366.0
DPH3_k127_12747210_1 SMART Elongator protein 3 MiaB NifB K09711 - - 0.000009275 52.0
DPH3_k127_12760588_0 PFAM Cobyrinic acid a,c-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000007386 232.0
DPH3_k127_12760588_1 magnesium chelatase K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000006925 173.0
DPH3_k127_12760588_2 Magnesium chelatase, subunit ChlI C-terminal K07391 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000006774 55.0
DPH3_k127_1279055_0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000000000000000000000000000000000000002224 196.0
DPH3_k127_1279055_1 PFAM AMP-dependent synthetase and ligase K00666,K12508 - 6.2.1.34 0.0000000000000000000000000000000000002136 145.0
DPH3_k127_12805461_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1439.0
DPH3_k127_12805461_1 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 7.477e-221 706.0
DPH3_k127_12805461_2 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 331.0
DPH3_k127_12806675_0 Protein containing von Willebrand factor type A (VWA) domain K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006154 271.0
DPH3_k127_12806675_1 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000003136 193.0
DPH3_k127_12806675_2 Universal stress protein - - - 0.00000000000003222 78.0
DPH3_k127_12807418_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 390.0
DPH3_k127_12807418_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 304.0
DPH3_k127_12807418_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000001227 142.0
DPH3_k127_12807418_3 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000123 86.0
DPH3_k127_12845793_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007749 289.0
DPH3_k127_12850962_0 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 446.0
DPH3_k127_12850962_1 secreted hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 359.0
DPH3_k127_12850962_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001839 297.0
DPH3_k127_1285289_0 Penicillin-binding Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006886 251.0
DPH3_k127_1285289_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000006128 166.0
DPH3_k127_1285289_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000304 81.0
DPH3_k127_1285289_3 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000004035 64.0
DPH3_k127_12852910_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 353.0
DPH3_k127_12852910_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000004175 84.0
DPH3_k127_12857784_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.404e-205 653.0
DPH3_k127_12857784_1 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 362.0
DPH3_k127_12857784_2 PFAM Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000002026 243.0
DPH3_k127_12857784_3 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000001165 110.0
DPH3_k127_12857784_4 STAS domain K04749 - - 0.0000000000000001258 84.0
DPH3_k127_12857784_5 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000004949 78.0
DPH3_k127_12857784_6 Prokaryotic N-terminal methylation motif - - - 0.0009664 49.0
DPH3_k127_12875306_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 374.0
DPH3_k127_12883893_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 550.0
DPH3_k127_12883893_1 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000031 231.0
DPH3_k127_12883893_2 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000001859 220.0
DPH3_k127_12883893_3 NIL - - - 0.00000000000000000000000000000000001124 146.0
DPH3_k127_12883893_4 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000003366 121.0
DPH3_k127_12883893_5 Protein of unknown function (DUF1573) - - - 0.000000387 56.0
DPH3_k127_12897934_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 426.0
DPH3_k127_12897934_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000376 64.0
DPH3_k127_12897934_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000002628 55.0
DPH3_k127_12908277_0 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000008437 90.0
DPH3_k127_12917520_0 Belongs to the glycosyl hydrolase 57 family - - - 2.695e-231 741.0
DPH3_k127_12917520_1 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000001826 267.0
DPH3_k127_12917706_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 410.0
DPH3_k127_12917706_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 315.0
DPH3_k127_12917706_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 290.0
DPH3_k127_12917706_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005213 242.0
DPH3_k127_12917706_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) - - - 0.0000000000000000000000000000000000000000000000004985 187.0
DPH3_k127_12917706_5 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000002712 180.0
DPH3_k127_12917706_6 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000114 164.0
DPH3_k127_12917706_7 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000004204 134.0
DPH3_k127_12917706_8 PFAM response regulator receiver - - - 0.00000000000000000000000000008168 123.0
DPH3_k127_1296000_0 Glycosyl transferase, family 35 K00688,K16153 - 2.4.1.1,2.4.1.11 5.589e-219 694.0
DPH3_k127_1296000_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000002497 244.0
DPH3_k127_1296000_2 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000001594 179.0
DPH3_k127_1300467_0 Von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 488.0
DPH3_k127_1300467_1 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000002956 245.0
DPH3_k127_1300467_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000004708 171.0
DPH3_k127_1300467_3 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000168 59.0
DPH3_k127_1300467_4 Putative zinc-finger - - - 0.0007654 48.0
DPH3_k127_1308249_0 RNA-metabolising metallo-beta-lactamase K07576 - - 2.621e-234 739.0
DPH3_k127_1308249_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000003246 240.0
DPH3_k127_1308852_0 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 436.0
DPH3_k127_1308852_1 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000002663 120.0
DPH3_k127_1308852_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000002917 109.0
DPH3_k127_1308852_3 Domain of unknown function (DUF4115) - - - 0.000000000000007364 83.0
DPH3_k127_1309994_0 PFAM Polysulphide reductase, NrfD K00185 - - 3.28e-201 632.0
DPH3_k127_1309994_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 540.0
DPH3_k127_1309994_2 PFAM 4Fe-4S K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 521.0
DPH3_k127_1309994_3 Seven times multi-haem cytochrome CxxCH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 299.0
DPH3_k127_1309994_4 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000445 252.0
DPH3_k127_1309994_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006337 243.0
DPH3_k127_13223_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 496.0
DPH3_k127_13223_1 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 418.0
DPH3_k127_13223_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 361.0
DPH3_k127_13223_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000001274 207.0
DPH3_k127_1323931_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 577.0
DPH3_k127_1323931_1 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 351.0
DPH3_k127_1323931_2 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003504 261.0
DPH3_k127_1323931_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000004341 113.0
DPH3_k127_1335473_0 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 323.0
DPH3_k127_1335473_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000002672 244.0
DPH3_k127_1335473_2 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000264 197.0
DPH3_k127_1335473_3 Lysin motif - - - 0.0000001546 63.0
DPH3_k127_1335539_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000002041 238.0
DPH3_k127_1335539_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000003959 163.0
DPH3_k127_1335539_2 Acetyltransferase (GNAT) domain - - - 0.00000001803 58.0
DPH3_k127_1373651_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 417.0
DPH3_k127_1373651_1 YhhN family - - - 0.000000000000000000000000000002093 133.0
DPH3_k127_1373651_2 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000004142 96.0
DPH3_k127_1426807_0 Fe-S oxidoreductase - - - 3.815e-196 633.0
DPH3_k127_1426807_1 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 529.0
DPH3_k127_1426807_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
DPH3_k127_1426807_3 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 287.0
DPH3_k127_1426807_4 PFAM regulatory protein TetR K13770 - - 0.0000000000000000000000000000000000000000000000000000000000000000248 229.0
DPH3_k127_1439578_0 Glutamine amidotransferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 615.0
DPH3_k127_1439578_1 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191,K07390 - - 0.0000000239 55.0
DPH3_k127_1442582_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 423.0
DPH3_k127_1442582_1 - - - - 0.0000076 51.0
DPH3_k127_1442883_0 pentaerythritol trinitrate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002438 265.0
DPH3_k127_1442883_1 Inosine-uridine preferring nucleoside hydrolase K01239 - 3.2.2.1 0.0000000000000000000000000000000000001227 154.0
DPH3_k127_1442883_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000725 113.0
DPH3_k127_1483740_0 - - - - 0.0000000000000000000000000000000000000002821 170.0
DPH3_k127_1483740_1 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000001951 143.0
DPH3_k127_1483740_2 - - - - 0.00000000000000000000000000000004563 130.0
DPH3_k127_1483740_3 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.00000002305 66.0
DPH3_k127_1483740_4 GAF domain - - - 0.00008074 56.0
DPH3_k127_1487693_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 456.0
DPH3_k127_1487693_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000006167 166.0
DPH3_k127_1494625_0 geranylgeranyl reductase activity K10960,K17830 - 1.3.1.101,1.3.1.111,1.3.1.83,1.3.7.11 0.00000000000000000000000000000000000000000000000000003725 203.0
DPH3_k127_1494625_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000003941 132.0
DPH3_k127_1508925_0 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 385.0
DPH3_k127_1508925_1 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 364.0
DPH3_k127_1508925_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000006767 263.0
DPH3_k127_1508925_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001918 239.0
DPH3_k127_1508925_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000004322 153.0
DPH3_k127_1521178_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 4.697e-206 655.0
DPH3_k127_1537644_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007313 251.0
DPH3_k127_1537644_1 AIR synthase related protein, N-terminal domain K07123 - - 0.0000000000000000000000000000000000000000000000000000000000000007884 236.0
DPH3_k127_1541547_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000008107 179.0
DPH3_k127_1541547_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000002996 150.0
DPH3_k127_1541547_2 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000002538 132.0
DPH3_k127_1573919_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 347.0
DPH3_k127_1573919_1 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000000004273 186.0
DPH3_k127_1573919_2 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.0000000000000000000000000000000000001988 146.0
DPH3_k127_1573919_3 - - - - 0.00000008619 54.0
DPH3_k127_1575352_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080,K14082 - 2.1.1.246,2.1.1.247,4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 394.0
DPH3_k127_1575352_1 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 322.0
DPH3_k127_1575352_10 Carboxymuconolactone decarboxylase family - - - 0.0000001694 63.0
DPH3_k127_1575352_2 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 313.0
DPH3_k127_1575352_3 Methionine synthase, cobalamin (vitamin B12)-binding module, cap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 287.0
DPH3_k127_1575352_4 Alkylmercury lyase - - - 0.000000000000000000000000000000000000000000000000000000004615 207.0
DPH3_k127_1575352_5 nitric oxide dioxygenase activity K00528,K05784 GO:0000166,GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004324,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006001,GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010035,GO:0016043,GO:0016052,GO:0016226,GO:0016491,GO:0016730,GO:0016731,GO:0019318,GO:0019320,GO:0022607,GO:0031163,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1901575,GO:1901700 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000006954 192.0
DPH3_k127_1575352_6 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000002459 141.0
DPH3_k127_1575352_7 - - - - 0.00000000000000206 81.0
DPH3_k127_1575352_8 Alkylmercury lyase - - - 0.000000000002035 70.0
DPH3_k127_1575352_9 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000001245 58.0
DPH3_k127_15798_0 Alginate export - - - 0.000000000000000000000000000000000000000003858 171.0
DPH3_k127_15798_1 PFAM Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000008188 138.0
DPH3_k127_15798_2 lactoylglutathione lyase activity - - - 0.000000000000000000002437 97.0
DPH3_k127_15798_3 - - - - 0.0000000000000006549 78.0
DPH3_k127_15798_4 Protein of unknown function (DUF433) - - - 0.0000323 51.0
DPH3_k127_1587794_0 transport system involved in gliding motility, auxiliary K01992 - - 0.0000000000000000000000000000000000000000000000004359 185.0
DPH3_k127_1587794_1 Domain of unknown function (DUF4340) - - - 0.0000000000000005209 92.0
DPH3_k127_1604624_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1032.0
DPH3_k127_1604624_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 405.0
DPH3_k127_1604624_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004077 276.0
DPH3_k127_1604624_3 - - - - 0.0000000004652 61.0
DPH3_k127_1613237_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.00000000000000000000000000000000003083 139.0
DPH3_k127_1613237_1 Prokaryotic N-terminal methylation motif K02650,K02682 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.000000001203 66.0
DPH3_k127_1622336_0 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000001012 184.0
DPH3_k127_1622336_1 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.0000000002575 74.0
DPH3_k127_1622336_2 Biopolymer transport protein ExbD/TolR - - - 0.0000008795 59.0
DPH3_k127_1625705_0 dipeptidyl-peptidase activity K06978 - - 5.001e-241 771.0
DPH3_k127_1625705_1 - K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 431.0
DPH3_k127_1625705_2 high-affinity sulfate:proton symporter activity K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 300.0
DPH3_k127_1625705_3 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000139 243.0
DPH3_k127_1625705_4 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000005139 209.0
DPH3_k127_1625705_5 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000000000000000002161 196.0
DPH3_k127_1625705_6 Domain of unknown function (DUF362) - - - 0.0000000000000000003726 101.0
DPH3_k127_1625705_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000002571 87.0
DPH3_k127_1625705_8 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.0002323 49.0
DPH3_k127_1653939_0 PFAM thiamine pyrophosphate protein domain protein TPP-binding K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 488.0
DPH3_k127_1653939_1 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000005408 184.0
DPH3_k127_1659524_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 2.193e-194 616.0
DPH3_k127_1659524_1 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 444.0
DPH3_k127_1659524_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 330.0
DPH3_k127_1659524_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 316.0
DPH3_k127_1659524_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001055 282.0
DPH3_k127_1659524_5 actin binding - - - 0.00000000000000000000000000000000000000000000000000002845 193.0
DPH3_k127_1659524_6 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000006773 173.0
DPH3_k127_1659524_7 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000001208 162.0
DPH3_k127_1659524_8 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000002059 140.0
DPH3_k127_1659524_9 Putative regulatory protein - - - 0.00000000000000000000000005837 109.0
DPH3_k127_1660283_0 choline dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 370.0
DPH3_k127_1660283_1 AAA domain K07321 - - 0.000000000000000000000000000000000000000000000000000000000007797 216.0
DPH3_k127_1660283_2 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000009901 134.0
DPH3_k127_1660283_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0005734 46.0
DPH3_k127_1661158_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 395.0
DPH3_k127_1661158_1 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000006451 144.0
DPH3_k127_1683516_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 1.742e-249 784.0
DPH3_k127_1683516_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000001516 217.0
DPH3_k127_1683516_2 L-2-amino-thiazoline-4-carboxylic acid hydrolase - - - 0.000000000000000000000000000000000000000000004101 169.0
DPH3_k127_1685909_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1230.0
DPH3_k127_1685909_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 490.0
DPH3_k127_1685909_2 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 400.0
DPH3_k127_1697181_0 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 346.0
DPH3_k127_1697181_1 PFAM Bacterial transferase hexapeptide (three repeats) - - - 0.00000000000008789 79.0
DPH3_k127_171214_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 484.0
DPH3_k127_171214_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000001173 146.0
DPH3_k127_171214_2 Anaphase-promoting complex, cyclosome, subunit 3 K06665 GO:0000122,GO:0000228,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001190,GO:0001191,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016584,GO:0017053,GO:0018130,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032774,GO:0032879,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0040029,GO:0042304,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0060255,GO:0062012,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0072364,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090304,GO:0090568,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141 - 0.0005556 51.0
DPH3_k127_1712527_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 8.934e-202 641.0
DPH3_k127_1712527_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004343 251.0
DPH3_k127_1712527_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000188 204.0
DPH3_k127_1712527_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000003227 187.0
DPH3_k127_1712527_4 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000006518 165.0
DPH3_k127_1712527_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000006712 159.0
DPH3_k127_1712527_6 Putative regulatory protein - - - 0.00000000000000000000000000001081 122.0
DPH3_k127_1722000_0 Pfam:Kce K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002721 279.0
DPH3_k127_1722000_1 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000003334 243.0
DPH3_k127_1722000_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0009521 49.0
DPH3_k127_1765670_0 Peroxisomal multifunctional enzyme type K12405,K14729 GO:0000003,GO:0000038,GO:0002064,GO:0003006,GO:0003674,GO:0003824,GO:0003857,GO:0004303,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007548,GO:0007568,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008209,GO:0008210,GO:0008406,GO:0008584,GO:0009056,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009719,GO:0009725,GO:0009888,GO:0009987,GO:0010033,GO:0010817,GO:0014070,GO:0016042,GO:0016054,GO:0016125,GO:0016229,GO:0016491,GO:0016508,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0018812,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0022414,GO:0030154,GO:0030258,GO:0030283,GO:0030855,GO:0031907,GO:0031974,GO:0032501,GO:0032502,GO:0032787,GO:0033764,GO:0033865,GO:0033875,GO:0033993,GO:0034032,GO:0034440,GO:0034641,GO:0034754,GO:0035337,GO:0035383,GO:0036111,GO:0036112,GO:0042221,GO:0042445,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044594,GO:0045137,GO:0046395,GO:0046483,GO:0046546,GO:0046661,GO:0046983,GO:0048468,GO:0048513,GO:0048545,GO:0048608,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051716,GO:0055086,GO:0055114,GO:0060008,GO:0060009,GO:0060429,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070887,GO:0071310,GO:0071407,GO:0071704,GO:0072329,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901568,GO:1901575,GO:1901615,GO:1902652 1.1.1.35,4.2.1.107,4.2.1.119 0.00000000000000000000000000000000000000000000000000000000000000002655 229.0
DPH3_k127_1765670_1 PFAM Pterin binding enzyme K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000005356 235.0
DPH3_k127_1765670_2 Rubrerythrin - - - 0.00004045 52.0
DPH3_k127_1787047_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 391.0
DPH3_k127_1787047_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 318.0
DPH3_k127_1803611_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 2.406e-207 659.0
DPH3_k127_1803611_1 General secretion pathway protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 378.0
DPH3_k127_1803611_2 Bacterial type II/III secretion system short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004419 280.0
DPH3_k127_1803611_3 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000000000001944 183.0
DPH3_k127_182271_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000001251 131.0
DPH3_k127_182271_1 - - - - 0.000002047 60.0
DPH3_k127_1830003_0 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1200.0
DPH3_k127_1830003_1 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 601.0
DPH3_k127_1830003_10 lyase activity - - - 0.00000000000000000000000000000000000000000000007406 178.0
DPH3_k127_1830003_11 4Fe-4S dicluster domain K03390,K16887,K18930,K22482 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000006924 159.0
DPH3_k127_1830003_12 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000000000000001132 164.0
DPH3_k127_1830003_13 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.000000000000000000000000000005433 123.0
DPH3_k127_1830003_14 peptidyl-tyrosine sulfation K07729 - - 0.0000000000000000000000006239 108.0
DPH3_k127_1830003_16 - - - - 0.0000003775 54.0
DPH3_k127_1830003_2 ferredoxin oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 526.0
DPH3_k127_1830003_3 PFAM Cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 526.0
DPH3_k127_1830003_4 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 410.0
DPH3_k127_1830003_5 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 344.0
DPH3_k127_1830003_6 Uncharacterised protein family (UPF0227) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002174 275.0
DPH3_k127_1830003_7 Polyprenyl synthetase K02523,K13787 GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000005192 253.0
DPH3_k127_1830003_8 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000006961 216.0
DPH3_k127_1858882_0 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000002203 216.0
DPH3_k127_1858882_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000001036 102.0
DPH3_k127_1858882_2 Chlorophyllase - - - 0.0000000000000009606 89.0
DPH3_k127_1860179_0 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 328.0
DPH3_k127_1860179_1 alpha-L-arabinofuranosidase - - - 0.0000000000000172 87.0
DPH3_k127_1862611_0 Anthranilate synthase component I, N terminal region K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000005882 256.0
DPH3_k127_1862611_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000005327 187.0
DPH3_k127_1862611_2 Sporulation related domain K03749 - - 0.000006434 55.0
DPH3_k127_187758_0 Type II and III secretion system protein K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 365.0
DPH3_k127_187758_1 - - - - 0.000005702 51.0
DPH3_k127_1902922_0 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 472.0
DPH3_k127_1902922_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 449.0
DPH3_k127_1906080_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 620.0
DPH3_k127_1906080_1 - - - - 0.00000000000000001518 83.0
DPH3_k127_1906080_2 - - - - 0.000000000003967 73.0
DPH3_k127_1913612_0 Elongation factor SelB winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 546.0
DPH3_k127_1913612_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 486.0
DPH3_k127_1913612_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000000339 255.0
DPH3_k127_1913612_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000003599 176.0
DPH3_k127_1913612_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000002671 107.0
DPH3_k127_1926919_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 607.0
DPH3_k127_1926919_1 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000009072 221.0
DPH3_k127_1926919_2 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.00000000000000000000000000000000000000000000007944 180.0
DPH3_k127_1926919_3 PFAM CBS domain K04767 - - 0.000000000000000000000000003423 119.0
DPH3_k127_1926919_4 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000002182 108.0
DPH3_k127_1926919_5 - - - - 0.0000000000000000000005473 96.0
DPH3_k127_1977989_0 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 1.138e-218 694.0
DPH3_k127_1977989_1 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 527.0
DPH3_k127_1977989_2 Type II secretion system (T2SS), protein F K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 455.0
DPH3_k127_1987773_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 460.0
DPH3_k127_1987773_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 368.0
DPH3_k127_1987773_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00003,K01139 - 1.1.1.3,2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 353.0
DPH3_k127_1987773_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009265 291.0
DPH3_k127_1987773_4 nitric oxide dioxygenase activity K00528,K05784 GO:0000166,GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004324,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006001,GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010035,GO:0016043,GO:0016052,GO:0016226,GO:0016491,GO:0016730,GO:0016731,GO:0019318,GO:0019320,GO:0022607,GO:0031163,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1901575,GO:1901700 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000006147 218.0
DPH3_k127_1987773_5 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000001125 209.0
DPH3_k127_1987773_6 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000006937 162.0
DPH3_k127_1987773_7 PFAM thioesterase superfamily K02614 - - 0.00000000000000000000000000003538 121.0
DPH3_k127_1987773_9 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0009868 47.0
DPH3_k127_2012099_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 563.0
DPH3_k127_2020186_0 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 346.0
DPH3_k127_2020186_1 - - - - 0.00000000000000000000000000003485 129.0
DPH3_k127_2055695_0 CTP reductase activity K21636 - 1.1.98.6 1.411e-319 1002.0
DPH3_k127_2055695_1 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000001071 195.0
DPH3_k127_2072502_0 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000308 106.0
DPH3_k127_2072502_1 type IV pilus modification protein PilV K02458,K02671 - - 0.00002472 53.0
DPH3_k127_2072502_2 pilus assembly protein PilW - - - 0.0005033 50.0
DPH3_k127_2082267_0 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.000000000000000000000000000000000002477 146.0
DPH3_k127_2082267_1 Protein of unknown function (DUF1329) - - - 0.00000002517 64.0
DPH3_k127_2125581_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.293e-288 909.0
DPH3_k127_2125581_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.58e-212 679.0
DPH3_k127_2125581_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000008643 83.0
DPH3_k127_2125581_11 Tetratricopeptide repeat - - - 0.0000001201 61.0
DPH3_k127_2125581_2 BPG-independent PGAM N-terminus (iPGM_N) K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 575.0
DPH3_k127_2125581_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 410.0
DPH3_k127_2125581_4 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 392.0
DPH3_k127_2125581_5 DNA polymerase alpha chain like domain K07053,K20859 - 3.1.3.97,3.1.4.57 0.00000000000000000000000000000000000000000000000000000000000004578 223.0
DPH3_k127_2125581_6 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000000000000000000000000000000002801 224.0
DPH3_k127_2125581_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000007968 203.0
DPH3_k127_2125581_8 lactoylglutathione lyase activity K08234 - - 0.00000000000000000000000000000000000000000004808 173.0
DPH3_k127_2125581_9 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000007939 117.0
DPH3_k127_214559_0 Belongs to the heat shock protein 70 family - - - 9.556e-270 847.0
DPH3_k127_214559_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 499.0
DPH3_k127_2162091_0 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K01905,K11175,K22224 - 2.1.2.2,6.2.1.13 0.0000000000000000000000000000000000000000000007543 176.0
DPH3_k127_2162091_1 RnfC Barrel sandwich hybrid domain K03615 - - 0.000000000000000000000000000007322 131.0
DPH3_k127_2162091_2 Class III cytochrome C family - - - 0.000000000002311 73.0
DPH3_k127_2167332_0 AMP-binding enzyme C-terminal domain K00666,K12508 - 6.2.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 389.0
DPH3_k127_2167332_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000245 194.0
DPH3_k127_2167332_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000008145 166.0
DPH3_k127_2173355_0 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 321.0
DPH3_k127_2173355_1 Fibronectin type 3 domain - - - 0.0000000000001027 81.0
DPH3_k127_2179089_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 456.0
DPH3_k127_2179089_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 414.0
DPH3_k127_2179089_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 315.0
DPH3_k127_2179089_3 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001066 278.0
DPH3_k127_2179089_4 Histidine kinase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001266 211.0
DPH3_k127_2179089_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000006769 183.0
DPH3_k127_2208792_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 7.071e-261 820.0
DPH3_k127_2208792_1 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.554e-212 685.0
DPH3_k127_2208792_10 response regulator - - - 0.0000000000000000000000002937 119.0
DPH3_k127_2208792_11 Ribosomal protein L35 K02916 - - 0.0000000000000000001179 91.0
DPH3_k127_2208792_2 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 485.0
DPH3_k127_2208792_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 448.0
DPH3_k127_2208792_4 VWA containing CoxE family protein K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 388.0
DPH3_k127_2208792_5 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 354.0
DPH3_k127_2208792_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000003444 205.0
DPH3_k127_2208792_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000001195 148.0
DPH3_k127_2208792_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000006512 132.0
DPH3_k127_2208792_9 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000123 111.0
DPH3_k127_2216689_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 388.0
DPH3_k127_2216689_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 376.0
DPH3_k127_2216689_2 Peptidase family M50 K16922 - - 0.00000000000000000000000000000000000005534 158.0
DPH3_k127_2218940_0 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 487.0
DPH3_k127_2218940_1 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 354.0
DPH3_k127_2218940_2 Belongs to the TPP enzyme family K00158,K03336 - 1.2.3.3,3.7.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 340.0
DPH3_k127_2218940_3 - - - - 0.000000000000005069 82.0
DPH3_k127_2219810_0 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000004688 263.0
DPH3_k127_2219810_1 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000005752 229.0
DPH3_k127_2219810_2 alkyl hydroperoxide reductase activity K00384,K03387 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008785,GO:0009321,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.9 0.000000000000000000000000000000000122 146.0
DPH3_k127_2219810_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000002072 77.0
DPH3_k127_2297077_0 Exports the biofilm adhesin polysaccharide poly-beta- 1,6-N-acetyl-D-glucosamine (PGA) across the outer membrane. The PGA transported seems to be partially N-deacetylated since N- deacetylation of PGA by PgaB is needed for PGA export through the PgaA porin K11935 - - 0.00000000000000000000000000000003554 145.0
DPH3_k127_2297077_1 Hypothetical glycosyl hydrolase family 13 K11931 - - 0.0000000000000004065 83.0
DPH3_k127_2337200_0 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 355.0
DPH3_k127_2337200_1 CoA binding domain K01905 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 319.0
DPH3_k127_2337200_2 Protein of unknown function (DUF1329) - - - 0.0005356 50.0
DPH3_k127_2341294_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000988 440.0
DPH3_k127_2341294_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000662 271.0
DPH3_k127_2341294_2 endonuclease III K01142,K10773 - 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000002447 223.0
DPH3_k127_2341294_3 - - - - 0.00000000000000006875 82.0
DPH3_k127_2383186_0 Belongs to the phosphoglycerate kinase family K00927 GO:0002237,GO:0003674,GO:0003824,GO:0004618,GO:0004672,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006464,GO:0006468,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009743,GO:0009746,GO:0009749,GO:0009987,GO:0010033,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0030054,GO:0031090,GO:0032787,GO:0034284,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036211,GO:0042221,GO:0042866,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048046,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0055044,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0098588,GO:0098805,GO:0140096,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 451.0
DPH3_k127_2383186_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 342.0
DPH3_k127_2383186_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 323.0
DPH3_k127_2383186_3 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000006376 130.0
DPH3_k127_2383186_4 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000009341 99.0
DPH3_k127_2383186_5 Methyltransferase domain - - - 0.00000000008004 63.0
DPH3_k127_2383493_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 404.0
DPH3_k127_2383493_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000053 278.0
DPH3_k127_2383493_2 ferredoxin oxidoreductase alpha subunit K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007684 252.0
DPH3_k127_2383493_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000003303 171.0
DPH3_k127_2389229_0 Phosphotriesterase family K07048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 496.0
DPH3_k127_2389229_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 481.0
DPH3_k127_2389229_2 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000007063 130.0
DPH3_k127_2389229_3 TIGRFAM methylmalonyl-CoA mutase N-terminal domain - - - 0.00000006804 55.0
DPH3_k127_2395493_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000001475 130.0
DPH3_k127_2395493_1 PFAM MgtE intracellular - - - 0.0004502 50.0
DPH3_k127_2408885_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 333.0
DPH3_k127_2408885_1 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000001221 129.0
DPH3_k127_2408885_2 - - - - 0.00000000000000000000000001915 115.0
DPH3_k127_2408885_3 Radical SAM - - - 0.000001828 51.0
DPH3_k127_241605_0 pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000000000000000000000000002819 181.0
DPH3_k127_241605_1 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000001354 156.0
DPH3_k127_241605_2 Nitroreductase family - - - 0.0000000000000000000006009 96.0
DPH3_k127_241605_3 gluconolactonase activity K01053 - 3.1.1.17 0.000000000003039 75.0
DPH3_k127_2420804_0 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601,K08965 - 4.1.1.39,5.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 392.0
DPH3_k127_2420804_1 Type III effector Hrp-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 327.0
DPH3_k127_2420804_2 D-lyxose isomerase K09988 - 5.3.1.15 0.00000000000000000000000000000000002687 137.0
DPH3_k127_242214_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000328 252.0
DPH3_k127_242214_1 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000001128 188.0
DPH3_k127_242214_2 - - - - 0.0000000000000000000000000002281 131.0
DPH3_k127_242214_3 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000001703 98.0
DPH3_k127_242214_4 membrane lipoprotein lipid attachment site K07337 - - 0.0000000003991 60.0
DPH3_k127_242214_5 PEGA domain - - - 0.0004784 51.0
DPH3_k127_2441883_0 PFAM Glycosyl transferase family 2 K21349 - 2.4.1.268 1.158e-206 650.0
DPH3_k127_2441883_1 acyl-CoA dehydrogenase activity K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 488.0
DPH3_k127_2441883_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 429.0
DPH3_k127_2441883_3 YdjC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 258.0
DPH3_k127_2441883_4 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003889 237.0
DPH3_k127_2441883_5 - - - - 0.000000000000000000000000000002216 128.0
DPH3_k127_2441883_6 Outer membrane lipoprotein carrier protein LolA - - - 0.0000000004153 63.0
DPH3_k127_2442507_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002588 232.0
DPH3_k127_2442507_1 PFAM glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000004386 161.0
DPH3_k127_2442507_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000482 89.0
DPH3_k127_2442507_3 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000003656 73.0
DPH3_k127_2445605_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.826e-205 646.0
DPH3_k127_2445605_1 Belongs to the universal ribosomal protein uS5 family K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003753 232.0
DPH3_k127_2445605_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000011 206.0
DPH3_k127_2445605_3 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000002156 169.0
DPH3_k127_2445605_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000005319 140.0
DPH3_k127_2445605_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000002347 92.0
DPH3_k127_2445605_6 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000006837 76.0
DPH3_k127_2445605_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000004666 56.0
DPH3_k127_2467247_0 Cytochrome c554 and c-prime - - - 3.87e-261 825.0
DPH3_k127_2467247_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 346.0
DPH3_k127_2487262_0 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 460.0
DPH3_k127_2487262_1 Heat shock protein 70 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 443.0
DPH3_k127_2487262_2 ferredoxin-NADP+ reductase activity K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001136 294.0
DPH3_k127_2487262_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000166 248.0
DPH3_k127_2487262_4 Domain of unknown function (DUF2760) - - - 0.000000000000000000000000000000000000000000008231 173.0
DPH3_k127_2523194_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
DPH3_k127_2523194_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000008852 176.0
DPH3_k127_2534142_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 372.0
DPH3_k127_2534142_1 signal peptide peptidase SppA K04773 - - 0.0000000000000000000000000000000000000000000000000000003874 199.0
DPH3_k127_2534142_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000002375 111.0
DPH3_k127_2563065_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 602.0
DPH3_k127_2563065_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 481.0
DPH3_k127_2563065_2 elongation factor G K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 463.0
DPH3_k127_2563065_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000002048 255.0
DPH3_k127_2563065_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000005319 244.0
DPH3_k127_2563065_5 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000002211 134.0
DPH3_k127_2566076_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 324.0
DPH3_k127_2566076_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 293.0
DPH3_k127_2566076_2 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 271.0
DPH3_k127_2566076_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008857 265.0
DPH3_k127_2566076_4 Glycosyl hydrolase family 76 - - - 0.0003535 52.0
DPH3_k127_2592687_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 509.0
DPH3_k127_2592687_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 362.0
DPH3_k127_2592687_2 domain-containing protein - - - 0.0000000000000001835 91.0
DPH3_k127_2626659_0 PFAM Glycosyl hydrolase family 3 C terminal domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 574.0
DPH3_k127_2626659_1 Flavin-binding monooxygenase-like - - - 0.000000000000000151 82.0
DPH3_k127_2629095_0 PFAM PhoH family protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 349.0
DPH3_k127_2629095_1 Domain of unknown function (DUF4388) - - - 0.00000000000000000311 97.0
DPH3_k127_2629095_2 peptidyl-tyrosine sulfation - - - 0.0001721 52.0
DPH3_k127_2639039_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.614e-287 895.0
DPH3_k127_2639039_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 528.0
DPH3_k127_2639039_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 299.0
DPH3_k127_2639039_3 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004563 263.0
DPH3_k127_2639039_4 PFAM transcription factor CarD K07736 - - 0.00000000000000000000000000000000000000000000000002347 184.0
DPH3_k127_2639039_5 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000007842 178.0
DPH3_k127_2639039_6 Protein conserved in bacteria - - - 0.00000000000000000000000000000005607 134.0
DPH3_k127_2645177_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009567 466.0
DPH3_k127_2645177_1 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 306.0
DPH3_k127_2645177_2 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000005894 120.0
DPH3_k127_2647684_0 Adventurous gliding motility protein R - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001961 255.0
DPH3_k127_2647684_1 COG0003 Oxyanion-translocating ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000004189 192.0
DPH3_k127_2647684_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000006209 181.0
DPH3_k127_2647684_3 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000003309 173.0
DPH3_k127_2647684_4 PFAM Maf family protein K06287 - - 0.000000000000000000000000000000000000000002864 165.0
DPH3_k127_2647684_5 PHB/PHA accumulation regulator DNA-binding domain - - - 0.000000000000000000000000000001709 128.0
DPH3_k127_2663143_0 histidine--tRNA ligase K01892 GO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 379.0
DPH3_k127_2663143_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000783 289.0
DPH3_k127_2663143_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000001159 186.0
DPH3_k127_2668212_0 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000002253 252.0
DPH3_k127_2668212_1 nuclease - - - 0.00000000000000000001077 102.0
DPH3_k127_2668212_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000006782 63.0
DPH3_k127_2672036_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 368.0
DPH3_k127_2672036_1 2-hydroxychromene-2-carboxylate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 285.0
DPH3_k127_2672036_2 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004992 286.0
DPH3_k127_2672036_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000001073 189.0
DPH3_k127_2676210_0 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000006853 139.0
DPH3_k127_2676210_1 dienelactone hydrolase - - - 0.00000000000000000000000000008536 119.0
DPH3_k127_2676210_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.00000000009795 73.0
DPH3_k127_2677721_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 334.0
DPH3_k127_2677721_1 peptidyl-prolyl cis-trans isomerase activity K03769,K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000001272 179.0
DPH3_k127_268804_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 3.847e-268 829.0
DPH3_k127_268804_1 NapD protein - - - 0.000000000000000000000008458 104.0
DPH3_k127_268804_2 Protein of unknown function (DUF2845) - - - 0.00000000003634 68.0
DPH3_k127_2698968_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 580.0
DPH3_k127_2698968_1 MGS-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 303.0
DPH3_k127_2698968_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000016 288.0
DPH3_k127_2698968_3 lyase activity - - - 0.000000000000000000000000000000000000000000000000000003884 216.0
DPH3_k127_2698968_4 PFAM Class III cytochrome C family - - - 0.0000000000000000000000000000001797 128.0
DPH3_k127_2698968_5 Predicted RNA-binding protein - - - 0.000000000000001234 78.0
DPH3_k127_2698968_6 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000002475 76.0
DPH3_k127_2703397_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 1.752e-203 671.0
DPH3_k127_2703397_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 587.0
DPH3_k127_2703397_10 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000001264 109.0
DPH3_k127_2703397_11 Belongs to the ompA family - - - 0.000000000000000000000001477 113.0
DPH3_k127_2703397_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 424.0
DPH3_k127_2703397_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 362.0
DPH3_k127_2703397_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000001367 198.0
DPH3_k127_2703397_5 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000004753 155.0
DPH3_k127_2703397_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000002433 124.0
DPH3_k127_2703397_7 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000003459 125.0
DPH3_k127_2703397_8 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000007044 123.0
DPH3_k127_2703397_9 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000002036 113.0
DPH3_k127_2708606_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 454.0
DPH3_k127_2708606_1 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 338.0
DPH3_k127_2708606_2 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 310.0
DPH3_k127_2708606_3 PFAM Vitamin B12 dependent methionine synthase, activation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000226 243.0
DPH3_k127_2708606_4 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000005548 201.0
DPH3_k127_2708606_5 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000774 183.0
DPH3_k127_2708606_6 - - - - 0.00000000000000000005764 95.0
DPH3_k127_2708606_7 recombinase activity - - - 0.0001569 48.0
DPH3_k127_2709224_0 Pfam:DUF422 - - - 0.0000007759 60.0
DPH3_k127_2709224_1 Carotenoid biosynthesis protein - - - 0.000003395 59.0
DPH3_k127_2709224_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0001545 47.0
DPH3_k127_2716452_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 294.0
DPH3_k127_2716452_1 HTH domain K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001372 288.0
DPH3_k127_2716452_2 Domain of unknown function (DUF3393) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003688 279.0
DPH3_k127_2716452_3 - - - - 0.00000000000000000000000000000000003245 143.0
DPH3_k127_2716452_4 Phage integrase family K03733 - - 0.000001796 54.0
DPH3_k127_2730512_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 507.0
DPH3_k127_2730512_1 PFAM Glycoside hydrolase 15-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 458.0
DPH3_k127_2730512_2 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 299.0
DPH3_k127_2730512_3 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.000000000000000000000000000000000003534 139.0
DPH3_k127_2737665_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 496.0
DPH3_k127_2737665_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 449.0
DPH3_k127_2737665_2 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 375.0
DPH3_k127_2737665_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000006703 138.0
DPH3_k127_2737665_4 PFAM Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000004534 124.0
DPH3_k127_2741822_0 PFAM formate C-acetyltransferase glycine radical K00656,K07540 - 2.3.1.54,4.1.99.11 0.0 1477.0
DPH3_k127_2741822_1 AMP-binding enzyme C-terminal domain K00666,K12508 - 6.2.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 338.0
DPH3_k127_2741822_4 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000002398 64.0
DPH3_k127_2766342_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 433.0
DPH3_k127_2766342_1 CoA binding domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 404.0
DPH3_k127_2766342_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000009947 129.0
DPH3_k127_2766342_11 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000329 113.0
DPH3_k127_2766342_12 signal transduction HD GYP protein - - - 0.0000000000000000003818 89.0
DPH3_k127_2766342_13 - - - - 0.00000000000000001313 89.0
DPH3_k127_2766342_2 TIGRFAM TraB family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 383.0
DPH3_k127_2766342_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 351.0
DPH3_k127_2766342_4 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 311.0
DPH3_k127_2766342_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004007 268.0
DPH3_k127_2766342_6 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000001183 237.0
DPH3_k127_2766342_7 B12 binding domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000004721 208.0
DPH3_k127_2766342_8 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000188 152.0
DPH3_k127_2766342_9 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000002517 142.0
DPH3_k127_2781884_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 394.0
DPH3_k127_2782474_0 synthase K01858 - 5.5.1.4 6.815e-195 616.0
DPH3_k127_2782474_1 PFAM Transketolase K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 425.0
DPH3_k127_2782474_10 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000000000000348 156.0
DPH3_k127_2782474_11 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0001018 47.0
DPH3_k127_2782474_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 406.0
DPH3_k127_2782474_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 394.0
DPH3_k127_2782474_4 ABC1 family K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 381.0
DPH3_k127_2782474_5 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000000000386 209.0
DPH3_k127_2782474_6 PFAM short-chain dehydrogenase reductase SDR K00059,K00068,K03366 - 1.1.1.100,1.1.1.140,1.1.1.304,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000259 206.0
DPH3_k127_2782474_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000009082 186.0
DPH3_k127_2782474_8 Dehydrogenase K00004 - 1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000006141 173.0
DPH3_k127_2782474_9 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.00000000000000000000000000000000000000001146 164.0
DPH3_k127_2828380_0 MMPL family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 302.0
DPH3_k127_2828380_1 Glycosyl transferase family 21 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 297.0
DPH3_k127_2828380_2 pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001084 231.0
DPH3_k127_2828380_3 - - - - 0.0000000000000000005656 93.0
DPH3_k127_2829248_0 Tetratricopeptide repeat - - - 0.0003883 54.0
DPH3_k127_28494_0 ABC transporter K03701 - - 9.661e-300 940.0
DPH3_k127_2854085_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 2.444e-204 656.0
DPH3_k127_2854085_1 arylsulfatase activity K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 548.0
DPH3_k127_2854085_2 Domain of unknown function (DUF3786) - - - 0.000000000000000008865 93.0
DPH3_k127_2854085_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000004409 75.0
DPH3_k127_2891260_0 BNR/Asp-box repeat - - - 0.000000000000000000000000000000008149 140.0
DPH3_k127_2891260_1 MMPL family - - - 0.000000000000000000000000000001452 140.0
DPH3_k127_289795_0 DNA-binding transcription factor activity K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 320.0
DPH3_k127_289795_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000004731 160.0
DPH3_k127_289795_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000009059 125.0
DPH3_k127_289795_3 calcium ion binding K22017 - - 0.00000000000004694 81.0
DPH3_k127_289795_4 - - - - 0.000000000009615 76.0
DPH3_k127_2899040_0 alpha-L-arabinofuranosidase K01209 - 3.2.1.55 2.314e-209 661.0
DPH3_k127_2899040_1 Belongs to the xylose isomerase family K01805 - 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 527.0
DPH3_k127_2899040_2 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 451.0
DPH3_k127_2899040_3 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 368.0
DPH3_k127_2899040_4 xylulokinase activity K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000001274 224.0
DPH3_k127_2899040_5 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000002039 169.0
DPH3_k127_2908035_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 5.47e-256 805.0
DPH3_k127_2908035_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 546.0
DPH3_k127_2908035_2 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 301.0
DPH3_k127_2908035_3 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000002169 198.0
DPH3_k127_2908035_4 - K01179,K10352 - 3.2.1.4 0.0000000001325 70.0
DPH3_k127_2909024_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 2.268e-218 695.0
DPH3_k127_2909024_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 414.0
DPH3_k127_2909024_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 379.0
DPH3_k127_2909024_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 324.0
DPH3_k127_2909024_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000001553 175.0
DPH3_k127_2909024_5 Could be involved in septation K06412 - - 0.0000000000000000000000000000000001234 134.0
DPH3_k127_2909024_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001164 132.0
DPH3_k127_2919709_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 3.813e-199 628.0
DPH3_k127_2919709_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 353.0
DPH3_k127_2919709_2 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate K00674,K05822 - 2.3.1.117,2.3.1.89 0.00000002378 64.0
DPH3_k127_2978048_0 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003371 245.0
DPH3_k127_2978048_1 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000129 238.0
DPH3_k127_2978048_2 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000006552 212.0
DPH3_k127_2978048_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000001033 98.0
DPH3_k127_2978048_4 COG1233 Phytoene dehydrogenase and related proteins K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000007332 61.0
DPH3_k127_2978048_5 Carotenoid biosynthesis protein - - - 0.000002676 58.0
DPH3_k127_2980015_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 305.0
DPH3_k127_3016560_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 9.334e-219 687.0
DPH3_k127_3016560_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 555.0
DPH3_k127_3016560_2 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000877 218.0
DPH3_k127_3016560_3 Anion-transporting ATPase K07321 - - 0.0000000000000000000000000000000000000000000000000002543 194.0
DPH3_k127_3016560_4 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000525 179.0
DPH3_k127_3016560_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000008948 177.0
DPH3_k127_3016560_6 Sigma-70, region 4 - - - 0.00000000000000000000004368 111.0
DPH3_k127_3016560_7 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 - - 0.00000000000000000001659 93.0
DPH3_k127_3016560_8 Biotin-requiring enzyme - - - 0.00000000000000000006567 101.0
DPH3_k127_3016560_9 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.0000000003446 69.0
DPH3_k127_3022561_0 denitrification pathway K02569,K15876 - - 0.000000000000000000000000000000006376 130.0
DPH3_k127_3022561_1 PFAM Radical SAM superfamily - - - 0.00000000000000000004252 104.0
DPH3_k127_3022561_2 4Fe-4S ferredoxin - - - 0.0004975 47.0
DPH3_k127_3043849_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 496.0
DPH3_k127_3043849_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 466.0
DPH3_k127_304844_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 3.075e-209 657.0
DPH3_k127_304844_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001087 272.0
DPH3_k127_3051576_0 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 346.0
DPH3_k127_3051576_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000002431 172.0
DPH3_k127_3051576_2 SMART AAA ATPase K02450 - - 0.0004352 49.0
DPH3_k127_3058799_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 384.0
DPH3_k127_3058799_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.00000000000000000000000000000005227 143.0
DPH3_k127_3058799_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000003694 126.0
DPH3_k127_30771_0 2-hydroxyglutaryl-CoA dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 420.0
DPH3_k127_3085014_0 acyl-CoA dehydrogenase activity - - - 3.136e-240 756.0
DPH3_k127_3085014_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000009682 209.0
DPH3_k127_3085803_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000005289 214.0
DPH3_k127_3085803_1 regulation of cell shape K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.00000000000391 67.0
DPH3_k127_3086329_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.474e-244 777.0
DPH3_k127_3086329_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004937 282.0
DPH3_k127_3089920_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02668,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 415.0
DPH3_k127_3089920_1 pfkB family carbohydrate kinase K00846 - 2.7.1.3 0.00000000000000000000000000000000000000000001292 170.0
DPH3_k127_3089920_2 response regulator, receiver - - - 0.0000000000000000000000000000007129 131.0
DPH3_k127_3101624_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.002e-195 623.0
DPH3_k127_3101624_1 PFAM acyl-CoA dehydrogenase domain protein K11731 - - 0.0000000000000000000000008436 106.0
DPH3_k127_3109463_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 481.0
DPH3_k127_3109463_1 Hydroxymethylglutaryl-coenzyme A reductase K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 402.0
DPH3_k127_3109463_2 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003714 281.0
DPH3_k127_3109463_3 glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000009755 265.0
DPH3_k127_3109463_4 PBS lyase HEAT-like repeat - - - 0.00000000000000000000000000000000000000000000000000734 196.0
DPH3_k127_3109463_5 Pfam:DUF422 K08977 - 4.2.1.161 0.00000000000000000000000000000000181 138.0
DPH3_k127_3109507_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 269.0
DPH3_k127_3109507_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000001423 213.0
DPH3_k127_3109507_2 - - - - 0.00009303 49.0
DPH3_k127_3120860_0 GXGXG motif - - - 6.55e-217 687.0
DPH3_k127_3120860_1 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000003779 114.0
DPH3_k127_3143241_0 Molybdopterin oxidoreductase Fe4S4 domain K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000127 284.0
DPH3_k127_3143241_1 PFAM Polysulphide reductase, NrfD - - - 0.00000004477 57.0
DPH3_k127_3147875_0 PFAM formate C-acetyltransferase glycine radical K00656,K07540 - 2.3.1.54,4.1.99.11 0.0 1429.0
DPH3_k127_3147875_1 PFAM formate C-acetyltransferase glycine radical K00656,K07540 - 2.3.1.54,4.1.99.11 0.0 1422.0
DPH3_k127_3147875_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 490.0
DPH3_k127_3165232_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 9.16e-209 660.0
DPH3_k127_3165232_1 Alpha amylase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 462.0
DPH3_k127_3172749_0 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 389.0
DPH3_k127_3185399_0 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 431.0
DPH3_k127_3185399_1 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001985 294.0
DPH3_k127_3185399_2 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004791 265.0
DPH3_k127_3185399_3 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000000000005409 232.0
DPH3_k127_3185399_4 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000003104 197.0
DPH3_k127_3185399_5 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.00000000000000000000000000000000002609 142.0
DPH3_k127_3185399_6 Tyrosine phosphatase family - - - 0.00000000000000001098 90.0
DPH3_k127_319370_0 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 289.0
DPH3_k127_319370_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008705 269.0
DPH3_k127_319370_2 ABC-type uncharacterized transport system - - - 0.00000000000000008596 91.0
DPH3_k127_319370_3 Flavodoxin domain - - - 0.00000000008043 72.0
DPH3_k127_319370_4 Methyltransferase type 11 K07755 - 2.1.1.137 0.000001723 55.0
DPH3_k127_319370_5 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00002545 50.0
DPH3_k127_3196314_0 Hydantoinase/oxoprolinase N-terminal region - - - 0.0 1045.0
DPH3_k127_3196314_1 Hydantoinase oxoprolinase N-terminal region K01469 - 3.5.2.9 4.678e-278 869.0
DPH3_k127_3196314_2 PFAM Hydantoinase B oxoprolinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 379.0
DPH3_k127_3196314_4 Acetone carboxylase gamma subunit - - - 0.00000000000000000000000000000000000000000000000002018 183.0
DPH3_k127_3206022_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 467.0
DPH3_k127_3206022_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000006899 192.0
DPH3_k127_3206022_2 Thioesterase - - - 0.0000001079 64.0
DPH3_k127_3214857_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000128 172.0
DPH3_k127_3214857_1 Histidine kinase - - - 0.00000000000000000000000006373 125.0
DPH3_k127_3231352_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000009482 229.0
DPH3_k127_3232882_0 Bacterial type II and III secretion system protein K12282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 510.0
DPH3_k127_3232882_1 general secretion pathway protein - - - 0.0000000000000000000000000000000000000000000000000303 189.0
DPH3_k127_3232882_2 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000001287 145.0
DPH3_k127_3236035_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 512.0
DPH3_k127_3236035_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 322.0
DPH3_k127_3236035_2 KR domain - - - 0.00000000000000000000000000000000000000000000000002013 190.0
DPH3_k127_3236035_3 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 - - 0.000000000000000000000000000000000006783 141.0
DPH3_k127_327375_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 481.0
DPH3_k127_327375_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 468.0
DPH3_k127_327375_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00122 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000005794 237.0
DPH3_k127_3307811_0 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 330.0
DPH3_k127_3307811_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001055 259.0
DPH3_k127_3307811_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000001553 235.0
DPH3_k127_330948_0 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000006521 238.0
DPH3_k127_330948_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000002065 155.0
DPH3_k127_330948_2 Serine aminopeptidase, S33 - - - 0.0000000008536 63.0
DPH3_k127_330948_3 PilZ domain - - - 0.000007621 56.0
DPH3_k127_3382563_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 582.0
DPH3_k127_3382563_1 acyl-coa dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 554.0
DPH3_k127_3382563_2 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 526.0
DPH3_k127_3382563_3 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 502.0
DPH3_k127_3382563_4 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 438.0
DPH3_k127_3382563_5 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 426.0
DPH3_k127_3382563_6 Methionine synthase B12-binding module cap domain protein - - - 0.00000000000000000000000000000000000000000000000000000000004983 215.0
DPH3_k127_3382563_7 formate C-acetyltransferase K20038 - 4.3.99.4 0.0000006066 51.0
DPH3_k127_3384750_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 532.0
DPH3_k127_3384750_1 Rod shape-determining protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 456.0
DPH3_k127_3384750_2 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 407.0
DPH3_k127_3384750_3 Cell cycle protein K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 352.0
DPH3_k127_3384750_4 PFAM Radical SAM K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003979 269.0
DPH3_k127_3384750_5 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000008867 208.0
DPH3_k127_3384750_6 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000001426 207.0
DPH3_k127_3384750_7 rod shape-determining protein MreD K03571 - - 0.0001481 53.0
DPH3_k127_3389163_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1048.0
DPH3_k127_3422480_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 478.0
DPH3_k127_3422480_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 314.0
DPH3_k127_3422480_2 CO dehydrogenase/acetyl-CoA synthase complex beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 287.0
DPH3_k127_3422480_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000001197 211.0
DPH3_k127_350809_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 353.0
DPH3_k127_350809_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000001532 245.0
DPH3_k127_350809_2 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000005284 121.0
DPH3_k127_3516391_0 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 392.0
DPH3_k127_3516391_1 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001765 270.0
DPH3_k127_3516391_2 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000007062 174.0
DPH3_k127_3519957_0 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 465.0
DPH3_k127_3519957_1 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000407 87.0
DPH3_k127_3519957_3 Class III cytochrome C family - - - 0.0004768 49.0
DPH3_k127_3539377_0 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 492.0
DPH3_k127_3539377_1 regulatory protein IclR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 315.0
DPH3_k127_3539377_2 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 293.0
DPH3_k127_3539377_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000002424 186.0
DPH3_k127_3539377_4 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000005701 143.0
DPH3_k127_3539468_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 7.454e-291 933.0
DPH3_k127_3539468_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 3.411e-268 842.0
DPH3_k127_3539468_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000001072 206.0
DPH3_k127_3539468_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000002684 190.0
DPH3_k127_3539468_4 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000007825 177.0
DPH3_k127_3539468_5 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000001625 145.0
DPH3_k127_3539468_6 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000002532 127.0
DPH3_k127_3539468_7 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 - 0.00000000000002204 75.0
DPH3_k127_3539468_8 all-trans-retinol 13,14-reductase activity K01854,K09845,K10027 - 1.3.99.26,1.3.99.27,1.3.99.28,1.3.99.29,1.3.99.31,5.4.99.9 0.000000001758 69.0
DPH3_k127_3544103_0 virion core protein (lumpy skin disease virus) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 434.0
DPH3_k127_3544103_1 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 396.0
DPH3_k127_3544103_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 388.0
DPH3_k127_3544103_3 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 366.0
DPH3_k127_3544103_4 membrane protein, hemolysin III homolog K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002487 280.0
DPH3_k127_3544103_5 Transcription factor zinc-finger - - - 0.00000000000000000000000000000000000000000000000000000000000000009644 234.0
DPH3_k127_3544103_6 COG1278 Cold shock proteins K03704 - - 0.0000000000000000000001569 98.0
DPH3_k127_3570718_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 389.0
DPH3_k127_3570718_1 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000001081 74.0
DPH3_k127_3620544_0 Receptor - - - 0.0000000000000002474 92.0
DPH3_k127_3623239_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.439e-309 970.0
DPH3_k127_3623239_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 386.0
DPH3_k127_3623239_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 387.0
DPH3_k127_3623239_3 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006113 269.0
DPH3_k127_3647267_0 associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 364.0
DPH3_k127_3647267_1 - - - - 0.0000000000000000000000000000000000000000000000000000000241 205.0
DPH3_k127_3647267_2 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000004053 158.0
DPH3_k127_367718_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 290.0
DPH3_k127_367718_1 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000004077 152.0
DPH3_k127_367718_2 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000005434 153.0
DPH3_k127_3678313_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 495.0
DPH3_k127_3678313_1 alcohol dehydrogenase K19714 - 1.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 432.0
DPH3_k127_3678313_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000001513 212.0
DPH3_k127_3701373_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 509.0
DPH3_k127_3701373_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000046 271.0
DPH3_k127_3701373_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001146 221.0
DPH3_k127_3701373_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000006793 127.0
DPH3_k127_3701373_4 - - - - 0.00002116 50.0
DPH3_k127_3701373_5 membrane-bound lytic murein transglycosylase K08304 - - 0.00003331 46.0
DPH3_k127_3703390_0 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 393.0
DPH3_k127_3703390_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000118 224.0
DPH3_k127_3703390_2 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000134 163.0
DPH3_k127_3703390_3 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000009336 123.0
DPH3_k127_3730098_0 Glucose inhibited division protein A K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000003873 258.0
DPH3_k127_3730098_1 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001303 263.0
DPH3_k127_3730098_2 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000007227 172.0
DPH3_k127_373236_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 522.0
DPH3_k127_373236_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000002457 156.0
DPH3_k127_373236_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001483 135.0
DPH3_k127_373236_3 Protein of unknown function (FYDLN_acid) - - - 0.00000000001052 66.0
DPH3_k127_373236_4 Putative regulatory protein - - - 0.00000007044 56.0
DPH3_k127_373236_5 Putative zinc-finger - GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009593,GO:0009628,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0042221,GO:0043167,GO:0043169,GO:0043934,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051606,GO:0051775,GO:0051776,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00002678 49.0
DPH3_k127_3757066_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 5.431e-201 636.0
DPH3_k127_3757066_1 COG1073 Hydrolases of the alpha beta superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 314.0
DPH3_k127_3757066_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000002108 239.0
DPH3_k127_3757066_3 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000667 133.0
DPH3_k127_3757066_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000114 47.0
DPH3_k127_377766_0 Esterase of the alpha-beta hydrolase superfamily K07001 GO:0003674,GO:0003824,GO:0016787 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001044 278.0
DPH3_k127_377766_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000001712 76.0
DPH3_k127_3781942_0 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 507.0
DPH3_k127_3781942_1 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000001329 149.0
DPH3_k127_3786560_0 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001856 272.0
DPH3_k127_3786560_1 COG NOG11133 non supervised orthologous group - - - 0.00000001275 62.0
DPH3_k127_3789128_0 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 399.0
DPH3_k127_3789128_1 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 294.0
DPH3_k127_3789128_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000004603 259.0
DPH3_k127_3789128_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000002253 216.0
DPH3_k127_3789128_4 protein conserved in bacteria (DUF2168) - - - 0.0000000000000000000000000000000000000000000000000000000006545 207.0
DPH3_k127_3789128_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000009559 147.0
DPH3_k127_3789128_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000004665 132.0
DPH3_k127_3789128_7 KH domain K06960 - - 0.00000000000000000000000000004441 119.0
DPH3_k127_3789128_8 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000009743 111.0
DPH3_k127_3789128_9 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000004241 94.0
DPH3_k127_3790566_0 Alpha-glucan water dikinase K08244 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009631,GO:0009941,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0031967,GO:0031975,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050521,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:1901575 2.7.9.4 1.154e-235 765.0
DPH3_k127_3790566_1 Diadenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000005363 201.0
DPH3_k127_3790566_2 Xylose isomerase domain protein TIM barrel - - - 0.00000002713 64.0
DPH3_k127_3815848_0 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 328.0
DPH3_k127_3815848_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000761 147.0
DPH3_k127_3815848_2 AMP-binding enzyme K00666 - - 0.0000003872 55.0
DPH3_k127_3821707_0 3-demethylubiquinone-9 3-O-methyltransferase activity K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 512.0
DPH3_k127_3821707_1 Outer membrane efflux protein - - - 0.00003292 49.0
DPH3_k127_382327_0 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000417 192.0
DPH3_k127_382327_1 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000004163 183.0
DPH3_k127_382327_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000004642 166.0
DPH3_k127_3841435_0 Carboxyl transferase domain - - - 1.832e-248 777.0
DPH3_k127_3841435_1 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 349.0
DPH3_k127_3841435_2 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000155 187.0
DPH3_k127_3841435_3 Protein of unknown function (DUF4125) - - - 0.000000000000000000000000000003143 124.0
DPH3_k127_3846612_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 376.0
DPH3_k127_3846612_1 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001004 281.0
DPH3_k127_3846612_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000008137 125.0
DPH3_k127_3852174_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 4.711e-206 650.0
DPH3_k127_3852174_1 ANTAR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003708 248.0
DPH3_k127_3852174_2 - - - - 0.000006589 54.0
DPH3_k127_38581_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 572.0
DPH3_k127_38581_1 ligase activity K01474,K10854 - 3.5.2.14,6.4.1.6 0.00000001613 60.0
DPH3_k127_3876507_0 MMPL family K07003 - - 0.00000000000000000000000000000000000000227 162.0
DPH3_k127_3876507_1 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000008784 125.0
DPH3_k127_3876507_2 Cold shock protein K03704 - - 0.0000000000000000000009722 98.0
DPH3_k127_3876507_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000005275 91.0
DPH3_k127_3880757_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K13775 - - 0.00000000000000000000000000000000000000000000000001253 191.0
DPH3_k127_3880757_1 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000000000000000000006507 126.0
DPH3_k127_3880757_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000004758 60.0
DPH3_k127_3893416_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 1.974e-200 634.0
DPH3_k127_3893416_1 Telomere recombination K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 584.0
DPH3_k127_3893416_2 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14128,K18007 - 1.12.1.2,1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000002069 217.0
DPH3_k127_3893416_3 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.0000000000000000000000002499 113.0
DPH3_k127_3893416_4 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.00000000000000007447 89.0
DPH3_k127_3895121_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 597.0
DPH3_k127_3895121_1 Enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 340.0
DPH3_k127_3895121_2 PFAM Stage II sporulation protein E (SpoIIE) - - - 0.000000000000000000000000000000000000000000006731 175.0
DPH3_k127_3900290_0 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 603.0
DPH3_k127_3900290_1 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 389.0
DPH3_k127_3900290_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 291.0
DPH3_k127_390993_0 NAD(P)-binding Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 476.0
DPH3_k127_390993_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 437.0
DPH3_k127_390993_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 292.0
DPH3_k127_390993_3 COG1233 Phytoene dehydrogenase and related proteins - - - 0.00000000000000000000000000000000000000000000000000000004084 217.0
DPH3_k127_390993_4 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000001673 139.0
DPH3_k127_3911192_0 mRNA catabolic process K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 396.0
DPH3_k127_3911192_1 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003102 300.0
DPH3_k127_3911192_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008778 266.0
DPH3_k127_3911192_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000007762 97.0
DPH3_k127_3911192_4 - - - - 0.00000001782 63.0
DPH3_k127_392963_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 530.0
DPH3_k127_392963_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 296.0
DPH3_k127_392963_2 reductase II K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000001714 251.0
DPH3_k127_3930716_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.067e-244 763.0
DPH3_k127_3930716_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 329.0
DPH3_k127_3930716_2 PFAM Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000002045 168.0
DPH3_k127_3930716_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000001383 141.0
DPH3_k127_3930716_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000001625 131.0
DPH3_k127_3946461_0 PFAM Cytochrome b b6 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 375.0
DPH3_k127_3946461_1 oxidoreductase activity, acting on diphenols and related substances as donors K02636 - 1.10.9.1 0.00000000000000000000000000000000000000000725 174.0
DPH3_k127_3946461_2 Ferric uptake regulator family K09825 - - 0.0000000000000000000000000000693 120.0
DPH3_k127_3946461_3 Rubrerythrin - - - 0.0000000000000000000000001212 107.0
DPH3_k127_3963936_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 387.0
DPH3_k127_3963936_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 292.0
DPH3_k127_3963936_2 Rhodanese Homology Domain - - - 0.000000000000000000000001446 110.0
DPH3_k127_3963936_3 Methylamine utilisation protein MauE - - - 0.0000000000000000000005809 101.0
DPH3_k127_3965726_0 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 447.0
DPH3_k127_3965726_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 352.0
DPH3_k127_3965726_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 310.0
DPH3_k127_3965726_3 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000003267 233.0
DPH3_k127_3965726_4 PFAM peptidase K21471 - - 0.00000000000000000000000000000000000002519 164.0
DPH3_k127_3965726_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000201 151.0
DPH3_k127_398943_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 444.0
DPH3_k127_398943_1 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000009337 190.0
DPH3_k127_4027802_0 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 511.0
DPH3_k127_4027802_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001489 164.0
DPH3_k127_4027802_2 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000008583 115.0
DPH3_k127_4060167_0 - - - - 0.00000000000000004834 87.0
DPH3_k127_4060167_1 all-trans-retinol 13,14-reductase activity K01854,K09845,K10027 - 1.3.99.26,1.3.99.27,1.3.99.28,1.3.99.29,1.3.99.31,5.4.99.9 0.00000000000001608 85.0
DPH3_k127_40681_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 361.0
DPH3_k127_40681_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000003846 153.0
DPH3_k127_40681_2 Protein of unknown function (DUF1329) - - - 0.00000000004441 74.0
DPH3_k127_4075229_0 Peptidase family C69 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 398.0
DPH3_k127_4075229_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000001379 217.0
DPH3_k127_4075229_2 Transposase IS116/IS110/IS902 family - - - 0.000000000002695 71.0
DPH3_k127_4099018_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 5.599e-263 821.0
DPH3_k127_4099018_1 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 349.0
DPH3_k127_4100678_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000005026 271.0
DPH3_k127_4100678_1 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000003042 120.0
DPH3_k127_4113334_0 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000006266 172.0
DPH3_k127_4113334_1 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000009318 155.0
DPH3_k127_4124793_0 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 4.154e-209 660.0
DPH3_k127_4124793_1 Squalene-hopene cyclase C-terminal domain K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 2.978e-203 652.0
DPH3_k127_4124793_2 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 376.0
DPH3_k127_4124793_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000001342 249.0
DPH3_k127_4124793_4 Protein of unknown function DUF116 K09729 - - 0.000000000000000002116 100.0
DPH3_k127_4124793_5 PAS domain K07636 - 2.7.13.3 0.00005705 55.0
DPH3_k127_4125139_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.041e-218 684.0
DPH3_k127_4125139_1 S4 RNA-binding domain K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000001477 232.0
DPH3_k127_4125139_2 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000001329 175.0
DPH3_k127_4125139_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000002091 73.0
DPH3_k127_412751_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
DPH3_k127_412751_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000001033 88.0
DPH3_k127_4149991_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 9.363e-247 770.0
DPH3_k127_4149991_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 331.0
DPH3_k127_4149991_2 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001632 259.0
DPH3_k127_4149991_3 proton-transporting ATP synthase activity, rotational mechanism K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000005504 154.0
DPH3_k127_4149991_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000755 134.0
DPH3_k127_4149991_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000003949 78.0
DPH3_k127_4149991_6 ATP synthase B/B' CF(0) K02109 - - 0.0003959 49.0
DPH3_k127_4154657_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.584e-223 702.0
DPH3_k127_4154657_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00265,K03616,K17723 - 1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009185 283.0
DPH3_k127_4154657_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000006042 220.0
DPH3_k127_4154657_3 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.00000000000000000002348 95.0
DPH3_k127_4169856_0 PFAM nitrite and sulphite reductase 4Fe-4S K11180 - 1.8.99.5 1.033e-227 710.0
DPH3_k127_4169856_1 PFAM methyl-viologen-reducing hydrogenase delta subunit K16886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 619.0
DPH3_k127_4169856_2 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 373.0
DPH3_k127_4169856_3 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.000000000000000000000000000000000000002409 147.0
DPH3_k127_4185508_0 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 530.0
DPH3_k127_4185508_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 408.0
DPH3_k127_4185508_2 CoA binding domain K01905 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 304.0
DPH3_k127_4185508_3 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000009642 228.0
DPH3_k127_4185508_4 Polysaccharide biosynthesis protein - - - 0.00000000468 64.0
DPH3_k127_4185508_5 protein import - - - 0.00000289 57.0
DPH3_k127_4186732_0 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000008474 198.0
DPH3_k127_4186732_1 Tetratricopeptide repeat - - - 0.0000000000000001901 86.0
DPH3_k127_4186732_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0009906 45.0
DPH3_k127_4204513_0 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 573.0
DPH3_k127_4204513_1 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 368.0
DPH3_k127_4204513_2 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009877 261.0
DPH3_k127_4204513_3 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.000000000000000000000000000000000000000000000000000000000007797 216.0
DPH3_k127_4204513_4 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000197 162.0
DPH3_k127_4204513_5 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000001809 137.0
DPH3_k127_4204513_6 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000001496 124.0
DPH3_k127_4204513_7 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000004069 118.0
DPH3_k127_4204513_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000351 111.0
DPH3_k127_4215055_0 Dehydratase family K01687 - 4.2.1.9 7.897e-230 725.0
DPH3_k127_4215055_1 Thiamine pyrophosphate enzyme, central K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 613.0
DPH3_k127_4215055_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 370.0
DPH3_k127_4215055_3 Universal bacterial protein YeaZ K14742 - - 0.0000000000000000000000000000000000000000000000003697 183.0
DPH3_k127_4215055_4 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000006245 175.0
DPH3_k127_4215055_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00002083 47.0
DPH3_k127_4240664_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001956 293.0
DPH3_k127_4240664_1 Acyl-transferase K00655,K00945 - 2.3.1.51,2.7.4.25 0.000000000000000004115 93.0
DPH3_k127_4240664_2 SnoaL-like domain - - - 0.00000000000002356 79.0
DPH3_k127_4248969_0 DSHCT - - - 5.671e-195 629.0
DPH3_k127_4248969_1 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 335.0
DPH3_k127_4248969_2 Alpha/beta hydrolase family - - - 0.0007365 43.0
DPH3_k127_4256598_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 404.0
DPH3_k127_4256598_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 312.0
DPH3_k127_4256598_2 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000001077 158.0
DPH3_k127_4273028_0 PFAM Bacterial Ig-like domain (group 2) - - - 0.0000000006383 72.0
DPH3_k127_4291467_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004141 416.0
DPH3_k127_4291467_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000049 246.0
DPH3_k127_4291467_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000002479 155.0
DPH3_k127_4291467_3 regulation of response to stimulus - - - 0.0000000002024 73.0
DPH3_k127_430105_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 471.0
DPH3_k127_430105_1 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 461.0
DPH3_k127_430105_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 362.0
DPH3_k127_430105_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000005936 259.0
DPH3_k127_430105_4 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000003652 255.0
DPH3_k127_430105_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000007422 243.0
DPH3_k127_430105_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000001983 153.0
DPH3_k127_430105_7 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000009762 140.0
DPH3_k127_430105_8 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000001601 91.0
DPH3_k127_4306085_0 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 437.0
DPH3_k127_4306085_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 323.0
DPH3_k127_4306085_10 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000008598 71.0
DPH3_k127_4306085_11 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00004383 55.0
DPH3_k127_4306085_2 ferredoxin iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 297.0
DPH3_k127_4306085_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004723 237.0
DPH3_k127_4306085_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000002857 212.0
DPH3_k127_4306085_5 FAD binding domain K21401 - 1.3.99.38 0.00000000000000000000000000000000000000001031 169.0
DPH3_k127_4306085_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000004097 156.0
DPH3_k127_4306085_7 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000004017 152.0
DPH3_k127_4306085_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000005176 141.0
DPH3_k127_4306085_9 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000002779 142.0
DPH3_k127_4311909_0 Alpha beta hydrolase K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 435.0
DPH3_k127_4311909_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000009941 244.0
DPH3_k127_4311909_2 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000001677 171.0
DPH3_k127_4311909_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000007696 112.0
DPH3_k127_4311909_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008653,GO:0009279,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0016788,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0042802,GO:0042803,GO:0043170,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044425,GO:0044462,GO:0044464,GO:0046493,GO:0046983,GO:0050528,GO:0052689,GO:0071704,GO:0071944,GO:1901135,GO:1901269,GO:1903509 - 0.0000000002792 69.0
DPH3_k127_4312935_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
DPH3_k127_4312935_1 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 347.0
DPH3_k127_4312935_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000006494 56.0
DPH3_k127_431381_0 PFAM CoA-binding domain protein K09181 - - 5.52e-202 659.0
DPH3_k127_431381_1 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000000000001784 213.0
DPH3_k127_431381_2 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000005997 111.0
DPH3_k127_4316264_0 cobalamin-transporting ATPase activity K02014 - - 4.048e-225 719.0
DPH3_k127_4316264_1 AsmA-like C-terminal region - - - 5.464e-217 718.0
DPH3_k127_4316264_2 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 2.577e-200 631.0
DPH3_k127_4316264_3 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 468.0
DPH3_k127_4316264_4 iron ion homeostasis K02015 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 399.0
DPH3_k127_4316264_5 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 393.0
DPH3_k127_4316264_6 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001252 278.0
DPH3_k127_4316264_7 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001072 279.0
DPH3_k127_4316264_8 amino acid transport K02030 - - 0.000000000000000000000000000000000000007965 155.0
DPH3_k127_4316264_9 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000109 113.0
DPH3_k127_4353199_0 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 432.0
DPH3_k127_4353199_1 4 iron, 4 sulfur cluster binding K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 337.0
DPH3_k127_4353199_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000158 247.0
DPH3_k127_4353199_3 lactate metabolic process K00113,K21834 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000001084 241.0
DPH3_k127_4353199_4 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000035 141.0
DPH3_k127_4353199_5 Class III cytochrome C family - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000002264 91.0
DPH3_k127_4375710_0 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 385.0
DPH3_k127_4375710_1 PFAM peptidase M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 321.0
DPH3_k127_4375710_2 COG0618 Exopolyphosphatase-related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002129 277.0
DPH3_k127_4375710_3 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000004164 206.0
DPH3_k127_4375710_4 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000007542 116.0
DPH3_k127_4375710_5 membrane K07003 - - 0.000000000000001683 86.0
DPH3_k127_4375710_6 Triphosphate tunel metalloenzyme 3-like - - - 0.00001395 55.0
DPH3_k127_4375969_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 366.0
DPH3_k127_4375969_1 metal-dependent hydrolase of the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000334 187.0
DPH3_k127_4375969_2 PFAM Methyltransferase type 11 K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000004668 186.0
DPH3_k127_4401546_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 447.0
DPH3_k127_4401546_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000008755 60.0
DPH3_k127_441610_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009631 485.0
DPH3_k127_441610_1 RNA recognition motif - - - 0.00000000000000003388 90.0
DPH3_k127_4424071_0 - - - - 0.0000000000000000000000000003231 131.0
DPH3_k127_4424071_1 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000002539 95.0
DPH3_k127_4435405_0 glucose sorbosone K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 408.0
DPH3_k127_4435405_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000001835 196.0
DPH3_k127_4435405_2 SnoaL-like domain - - - 0.00000000000000000006786 95.0
DPH3_k127_4435405_4 Arylesterase - - - 0.000000004619 57.0
DPH3_k127_4438470_0 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 3.872e-232 730.0
DPH3_k127_4438470_1 molybdopterin oxidoreductase Fe4S4 region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 422.0
DPH3_k127_4438470_2 Methyltransferase domain - - - 0.00003726 47.0
DPH3_k127_4438806_0 Flavin containing amine oxidoreductase K09516,K09835 - 1.3.99.23,5.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 280.0
DPH3_k127_4438806_1 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000003509 256.0
DPH3_k127_4456852_0 Bacterial DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 570.0
DPH3_k127_4456852_1 Catalyzes the synthesis of activated sulfate K00860 GO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0055114,GO:0071704,GO:1901564 2.7.1.25 0.000000000000000009264 83.0
DPH3_k127_4469386_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 413.0
DPH3_k127_4469386_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 299.0
DPH3_k127_4481537_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000007648 205.0
DPH3_k127_4481537_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000001999 165.0
DPH3_k127_4492258_0 radical SAM domain protein - - - 0.00000002065 68.0
DPH3_k127_4506447_0 Protein of unknown function (DUF1302) - - - 0.00000001579 68.0
DPH3_k127_4514669_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 3.346e-289 919.0
DPH3_k127_4514669_1 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000000000000000000000000000000000000000000000000000001216 218.0
DPH3_k127_4514669_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000002572 161.0
DPH3_k127_4530521_0 Bacterial regulatory protein, Fis family K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009522 434.0
DPH3_k127_4530521_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000005426 212.0
DPH3_k127_4530521_2 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000001267 84.0
DPH3_k127_4530521_3 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000001393 64.0
DPH3_k127_4568295_0 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 524.0
DPH3_k127_4568295_1 4Fe-4S binding domain K02572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 414.0
DPH3_k127_4568295_2 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000009252 243.0
DPH3_k127_4568295_3 Methyltransferase small domain K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000006222 186.0
DPH3_k127_4568295_4 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000001446 156.0
DPH3_k127_4568295_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000003884 143.0
DPH3_k127_4573344_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007851 281.0
DPH3_k127_4573344_1 ABC-type branched-chain amino acid transport K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000061 252.0
DPH3_k127_4573344_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000001232 91.0
DPH3_k127_4585635_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 408.0
DPH3_k127_4585635_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000133 138.0
DPH3_k127_4585635_2 Phytochrome region - - - 0.000000001513 59.0
DPH3_k127_4585892_0 Flagellar hook protein FlgE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 320.0
DPH3_k127_4585892_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000006618 145.0
DPH3_k127_4587729_0 PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009434 578.0
DPH3_k127_4644899_0 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 358.0
DPH3_k127_4644899_1 hsp70-Hsp90 organizing protein K09553 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009611,GO:0009628,GO:0009987,GO:0010033,GO:0016043,GO:0022607,GO:0031072,GO:0033554,GO:0034605,GO:0034622,GO:0035966,GO:0042221,GO:0043933,GO:0044085,GO:0050896,GO:0051131,GO:0051716,GO:0051879,GO:0065003,GO:0070417,GO:0070678,GO:0071840 - 0.0008199 48.0
DPH3_k127_4669471_0 Belongs to the AAA ATPase family K13525 - - 9.319e-245 777.0
DPH3_k127_4669471_1 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 490.0
DPH3_k127_4669471_10 Lysine methyltransferase - - - 0.00000000000000000000002715 109.0
DPH3_k127_4669471_11 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000001463 100.0
DPH3_k127_4669471_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000004447 97.0
DPH3_k127_4669471_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 445.0
DPH3_k127_4669471_3 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 430.0
DPH3_k127_4669471_4 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000002869 263.0
DPH3_k127_4669471_5 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000001316 242.0
DPH3_k127_4669471_6 Methyltransferase K15256 - - 0.0000000000000000000000000000000000000000000000000000000000005783 220.0
DPH3_k127_4669471_7 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000001809 208.0
DPH3_k127_4669471_8 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000002598 179.0
DPH3_k127_4669471_9 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000009173 167.0
DPH3_k127_4687352_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000004513 124.0
DPH3_k127_4687352_1 Protein of unknown function (DUF1329) - - - 0.000000000000000000002225 108.0
DPH3_k127_4687352_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000001107 79.0
DPH3_k127_4687352_3 PFAM IstB domain protein ATP-binding protein - - - 0.000001007 54.0
DPH3_k127_4709964_0 Phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 374.0
DPH3_k127_4709964_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000008748 112.0
DPH3_k127_4719386_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000001008 201.0
DPH3_k127_4719386_1 COG0657 Esterase lipase K01066 - - 0.00000000000000000003383 91.0
DPH3_k127_4719386_2 secreted hydrolase - - - 0.00000000000001188 85.0
DPH3_k127_4730298_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 580.0
DPH3_k127_4730298_1 PFAM H transporting two-sector ATPase D subunit K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006536 265.0
DPH3_k127_4730298_2 ATP synthase subunit C K02124 - - 0.00000000000000000000000000000000000000000000000000008313 190.0
DPH3_k127_4730298_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000005906 140.0
DPH3_k127_4730298_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000001641 111.0
DPH3_k127_4746559_0 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 374.0
DPH3_k127_4746559_2 MerR HTH family regulatory protein - - - 0.000000003272 62.0
DPH3_k127_4763114_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 557.0
DPH3_k127_4763114_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000003394 207.0
DPH3_k127_4763114_2 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000008435 87.0
DPH3_k127_4783807_0 Hydantoinase/oxoprolinase N-terminal region - - - 6.586e-195 630.0
DPH3_k127_4783807_1 acetone carboxylase, alpha subunit K10854 - 6.4.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 448.0
DPH3_k127_4783807_2 NADH flavin oxidoreductase NADH oxidase K00219,K21833 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 372.0
DPH3_k127_4783807_3 Acetone carboxylase gamma K10856 - 6.4.1.6 0.0000000000000000000000000000000000000000000000000000000004706 207.0
DPH3_k127_47875_0 Belongs to the UPF0434 family K09791 - - 0.000000000000000000001839 96.0
DPH3_k127_47875_1 O-Antigen ligase - - - 0.0000000000000000002144 103.0
DPH3_k127_47875_2 methyltransferase - - - 0.0000000000000000003612 88.0
DPH3_k127_4808439_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 522.0
DPH3_k127_4808439_1 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000004391 167.0
DPH3_k127_4808439_2 Major facilitator K08218 - - 0.000000000000000000000000000004554 125.0
DPH3_k127_4808439_3 Nudix N-terminal - - - 0.0000000000000008222 84.0
DPH3_k127_4808439_4 glycosyl transferase - - - 0.0007961 44.0
DPH3_k127_481405_0 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 435.0
DPH3_k127_481405_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 367.0
DPH3_k127_481405_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 289.0
DPH3_k127_481405_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833,K12256 - 2.6.1.113,2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000003425 229.0
DPH3_k127_481405_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000004518 139.0
DPH3_k127_481405_5 Acyltransferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000812 53.0
DPH3_k127_4816357_0 Exporters of the RND superfamily K07003 - - 7.655e-264 835.0
DPH3_k127_4825020_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 587.0
DPH3_k127_4825020_1 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 532.0
DPH3_k127_4825020_2 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 523.0
DPH3_k127_4825020_3 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 430.0
DPH3_k127_4825020_4 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001414 277.0
DPH3_k127_4825020_5 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000001375 200.0
DPH3_k127_4825020_6 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000002719 152.0
DPH3_k127_4825020_7 PhoD-like phosphatase - - - 0.00002093 56.0
DPH3_k127_4829949_0 AMP-binding enzyme C-terminal domain K00666,K12508 - 6.2.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 541.0
DPH3_k127_4829949_1 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 503.0
DPH3_k127_4879720_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 499.0
DPH3_k127_4879720_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03388 - 1.6.5.3,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000009293 141.0
DPH3_k127_4879720_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000001917 141.0
DPH3_k127_4910416_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000001539 212.0
DPH3_k127_4910416_1 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.0000000004588 70.0
DPH3_k127_4910416_2 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000001066 67.0
DPH3_k127_4911413_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000001445 245.0
DPH3_k127_4911413_1 Zn-dependent hydrolase, glyoxylase - - - 0.000000000000000000000000000000000000000000663 171.0
DPH3_k127_4911413_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000003749 127.0
DPH3_k127_4930402_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.317e-256 801.0
DPH3_k127_4930402_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 4.448e-250 781.0
DPH3_k127_4930402_10 Protein of unknown function (DUF1232) - - - 0.00000000000003398 79.0
DPH3_k127_4930402_11 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000132 70.0
DPH3_k127_4930402_2 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 317.0
DPH3_k127_4930402_3 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 306.0
DPH3_k127_4930402_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006736 259.0
DPH3_k127_4930402_5 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000008031 202.0
DPH3_k127_4930402_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01560,K07025,K20862 - 3.1.3.102,3.1.3.104,3.8.1.2 0.00000000000000000000000000000000000000000000000000005438 197.0
DPH3_k127_4930402_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000002221 181.0
DPH3_k127_4930402_8 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000008067 186.0
DPH3_k127_4930402_9 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis - - - 0.00000000000000000000000000000005551 134.0
DPH3_k127_4937501_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.82e-288 898.0
DPH3_k127_4937501_1 Fe-S cluster domain protein - - - 5.638e-263 827.0
DPH3_k127_4937501_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 562.0
DPH3_k127_4937501_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 302.0
DPH3_k127_4937501_4 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.00000000000000000000000000000000002271 147.0
DPH3_k127_4937501_5 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000008257 110.0
DPH3_k127_496746_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 537.0
DPH3_k127_496746_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 513.0
DPH3_k127_496746_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 435.0
DPH3_k127_496746_3 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000004986 228.0
DPH3_k127_496746_4 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000005356 235.0
DPH3_k127_496746_5 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000004996 160.0
DPH3_k127_496746_6 POTRA domain, FtsQ-type K03589 - - 0.00003421 49.0
DPH3_k127_4994264_0 PFAM Hydantoinase B oxoprolinase - - - 1.238e-246 767.0
DPH3_k127_4994264_1 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 324.0
DPH3_k127_4994264_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000188 157.0
DPH3_k127_4994264_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000001367 136.0
DPH3_k127_5007189_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1435.0
DPH3_k127_5007189_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 542.0
DPH3_k127_5007189_2 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 460.0
DPH3_k127_5007189_3 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000005344 197.0
DPH3_k127_5007189_4 Glycosyl transferase family 2 - - - 0.00000000000000001425 89.0
DPH3_k127_5026076_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 576.0
DPH3_k127_5026076_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 447.0
DPH3_k127_5026076_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 394.0
DPH3_k127_5026076_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 327.0
DPH3_k127_5026076_4 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001354 288.0
DPH3_k127_5026076_5 Cell division protein FtsQ K03589 - - 0.0000000000000001692 85.0
DPH3_k127_5034510_0 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 571.0
DPH3_k127_5034510_1 PFAM Cysteine-rich domain K08264 - 1.8.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 552.0
DPH3_k127_5034510_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 430.0
DPH3_k127_5034510_3 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 362.0
DPH3_k127_5034510_4 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 339.0
DPH3_k127_5034510_5 Enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 317.0
DPH3_k127_5034510_6 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 305.0
DPH3_k127_5034510_7 PFAM Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006861 272.0
DPH3_k127_5034510_8 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000001468 60.0
DPH3_k127_5049117_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.577e-195 649.0
DPH3_k127_5049117_1 ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000003958 220.0
DPH3_k127_5051054_0 PFAM type III restriction protein res subunit - - - 1.078e-279 881.0
DPH3_k127_5051054_1 High confidence in function and specificity - - - 2.917e-259 820.0
DPH3_k127_5051054_2 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 475.0
DPH3_k127_5051054_3 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.000000000000000000000000000000000000000000000000008869 189.0
DPH3_k127_5078022_0 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 608.0
DPH3_k127_5078022_1 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000001518 267.0
DPH3_k127_5078022_2 Flavin containing amine oxidoreductase - - - 0.00000005839 63.0
DPH3_k127_5091637_0 AcrB/AcrD/AcrF family K03296 - - 1.569e-211 687.0
DPH3_k127_5128841_0 NAD dependent epimerase/dehydratase family K06118 - 3.13.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 511.0
DPH3_k127_5128841_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001415 250.0
DPH3_k127_5128841_2 involved in lipopolysaccharide K03606 - - 0.0000000002365 74.0
DPH3_k127_5129890_0 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000003906 231.0
DPH3_k127_5129890_1 FAD linked oxidase domain protein K00803,K11472 - 2.5.1.26 0.00000000000000757 87.0
DPH3_k127_5129916_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 487.0
DPH3_k127_5129916_1 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000004896 141.0
DPH3_k127_5129916_2 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000004628 115.0
DPH3_k127_5130001_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.996e-214 675.0
DPH3_k127_5130001_1 epimerase dehydratase family K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 549.0
DPH3_k127_5135399_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1206.0
DPH3_k127_5135399_1 PFAM PrkA AAA domain K07180 - - 5.153e-308 955.0
DPH3_k127_5135399_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 4.904e-245 774.0
DPH3_k127_5135399_3 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000004822 208.0
DPH3_k127_5135399_4 retrograde transport, endosome to Golgi K07095 - - 0.00000000000000000000000000000000000000000003378 181.0
DPH3_k127_5135399_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000353 115.0
DPH3_k127_5178624_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 374.0
DPH3_k127_5178624_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 297.0
DPH3_k127_5178624_2 - - - - 0.000000000000000000487 96.0
DPH3_k127_5179981_0 lactate metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 360.0
DPH3_k127_5179981_1 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000008737 190.0
DPH3_k127_5180322_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 421.0
DPH3_k127_5180322_1 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 397.0
DPH3_k127_5186941_0 carboxylic ester hydrolase activity - - - 0.000000000199 74.0
DPH3_k127_5188733_0 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 0.0000000000000000000000002311 110.0
DPH3_k127_5188733_1 transferase activity, transferring acyl groups other than amino-acyl groups K02040,K20276,K21449 - - 0.0000000000001802 83.0
DPH3_k127_5194684_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 385.0
DPH3_k127_5194684_1 heat shock protein DnaJ domain protein K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 307.0
DPH3_k127_5194684_2 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000004387 229.0
DPH3_k127_5194684_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000001772 217.0
DPH3_k127_5194684_4 Heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000009834 86.0
DPH3_k127_5199008_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 4.52e-203 640.0
DPH3_k127_5199008_1 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 460.0
DPH3_k127_5199008_2 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 323.0
DPH3_k127_5199008_3 Pfam:Kce K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 309.0
DPH3_k127_5199008_4 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000002654 238.0
DPH3_k127_5199008_5 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000003832 113.0
DPH3_k127_5199008_6 Regulatory protein, FmdB family - - - 0.0000001717 58.0
DPH3_k127_5199008_7 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000003456 54.0
DPH3_k127_5210855_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 405.0
DPH3_k127_5210855_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 344.0
DPH3_k127_5210855_2 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000007523 148.0
DPH3_k127_5210855_3 Domain of unknown function (DUF4037) - - - 0.00000000000000000000000003491 108.0
DPH3_k127_5210855_4 Tetratricopeptide repeat - - - 0.0000000008487 66.0
DPH3_k127_5218601_0 PFAM 2-nitropropane dioxygenase NPD K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 325.0
DPH3_k127_5218601_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000001934 207.0
DPH3_k127_5249572_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 315.0
DPH3_k127_5249572_1 PFAM CoA binding domain K01905 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 304.0
DPH3_k127_5249572_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000002865 70.0
DPH3_k127_5257858_0 Domain of unknown function (DUF3390) K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 542.0
DPH3_k127_5257858_1 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 325.0
DPH3_k127_5257858_10 Alpha-L-fucosidase - - - 0.000000000000346 82.0
DPH3_k127_5257858_11 Domain of unknown function (DUF4336) - - - 0.0000001962 52.0
DPH3_k127_5257858_2 Choline/ethanolamine kinase K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000861 266.0
DPH3_k127_5257858_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
DPH3_k127_5257858_4 nitric oxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000003851 217.0
DPH3_k127_5257858_5 Pfam:DUF162 K00782 - - 0.000000000000000000000000000000000000000000000000000000000397 209.0
DPH3_k127_5257858_6 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.000000000000000000000000000000262 124.0
DPH3_k127_5257858_7 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000439 125.0
DPH3_k127_5257858_8 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000002916 112.0
DPH3_k127_5257858_9 - - - - 0.00000000000000000001934 95.0
DPH3_k127_5258782_0 type II secretion system protein E - - - 1.168e-231 729.0
DPH3_k127_5258782_1 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 444.0
DPH3_k127_5258782_2 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 286.0
DPH3_k127_5258782_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000002251 224.0
DPH3_k127_5258782_4 orotidine-5'-phosphate decarboxylase activity K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000001626 218.0
DPH3_k127_5258782_5 regulation of ruffle assembly - - - 0.00000000000000000000000000000000000000000000000000001293 198.0
DPH3_k127_5258782_6 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.000000000000000000000000000000000000000001952 167.0
DPH3_k127_5258782_7 Plasmid pRiA4b ORF-3-like protein - - - 0.00000000000000000000003476 114.0
DPH3_k127_5258782_8 Tetratricopeptide repeat - - - 0.00000145 60.0
DPH3_k127_5258782_9 - - - - 0.0001398 49.0
DPH3_k127_5267597_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 521.0
DPH3_k127_5267597_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 383.0
DPH3_k127_5267597_2 quinone binding K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 347.0
DPH3_k127_5267597_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000109 235.0
DPH3_k127_5267597_4 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003447 180.0
DPH3_k127_5267597_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K02573 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000005604 142.0
DPH3_k127_5267597_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000004366 122.0
DPH3_k127_5267597_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000005064 111.0
DPH3_k127_5267597_8 PKD domain - - - 0.0000000000000000000000005642 118.0
DPH3_k127_5268407_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 458.0
DPH3_k127_5268407_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 410.0
DPH3_k127_5268407_2 - - - - 0.00000007528 64.0
DPH3_k127_5268407_3 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000003198 57.0
DPH3_k127_5270262_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 465.0
DPH3_k127_5270262_1 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 384.0
DPH3_k127_5270262_2 DNA-binding transcription factor activity K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 332.0
DPH3_k127_5270262_3 PFAM Acyl-CoA dehydrogenase K09456 - - 0.00000000000000000000000005226 113.0
DPH3_k127_5270262_4 Pyridine nucleotide-disulphide oxidoreductase - GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.0002485 53.0
DPH3_k127_5271028_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 308.0
DPH3_k127_5279994_0 Thioesterase superfamily - - - 0.000000000000000000000000000000001227 139.0
DPH3_k127_5279994_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000009564 102.0
DPH3_k127_5279994_2 Thioesterase superfamily - - - 0.00000000001523 70.0
DPH3_k127_5292603_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000009852 78.0
DPH3_k127_5292603_1 Outer membrane lipoprotein-sorting protein - - - 0.000000004719 66.0
DPH3_k127_5292603_2 Putative zinc-finger - - - 0.0001669 51.0
DPH3_k127_5300018_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000001417 227.0
DPH3_k127_5300018_1 Surface antigen K07277 - - 0.00000000000000007745 93.0
DPH3_k127_5300018_2 acetoacetate decarboxylase K01574 - 4.1.1.4 0.00007105 46.0
DPH3_k127_5308830_0 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009789 331.0
DPH3_k127_5308830_1 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001267 291.0
DPH3_k127_5308830_2 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.00000000000000000000000000000000000000000000001026 180.0
DPH3_k127_5308830_3 4Fe-4S dicluster domain K08264 - 1.8.98.1 0.000000000000000008302 91.0
DPH3_k127_5379422_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 389.0
DPH3_k127_5379422_1 oxidoreductases (related to aryl-alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 320.0
DPH3_k127_5379422_2 Enoyl-(Acyl carrier protein) reductase K07535 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000667 282.0
DPH3_k127_5394928_0 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 527.0
DPH3_k127_5394928_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 417.0
DPH3_k127_5394928_2 COG2015, Alkyl sulfatase and related hydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 401.0
DPH3_k127_5394928_3 Zn-dependent hydrolase, glyoxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 397.0
DPH3_k127_5394928_4 Belongs to the thiolase family K07823 - 2.3.1.174 0.000000000000000000000000000000000000000000000000000000000000000000000175 258.0
DPH3_k127_5394928_5 Alcohol dehydrogenase GroES-like domain K00004 - 1.1.1.303,1.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000001005 249.0
DPH3_k127_5394928_6 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 0.00000000000000000000000000000000000000000000000000000001232 215.0
DPH3_k127_5394928_7 PFAM pyridoxamine 5-phosphate - - - 0.0000000000000000000000000000000000002953 144.0
DPH3_k127_5398590_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000007743 194.0
DPH3_k127_5398590_1 radical SAM domain protein K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000003087 186.0
DPH3_k127_5398590_2 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000002834 139.0
DPH3_k127_5398590_3 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0005723 46.0
DPH3_k127_5403643_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003518 249.0
DPH3_k127_5403643_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001406 214.0
DPH3_k127_5417749_0 heparanase activity K07964 - 3.2.1.166 0.000000000000000000000000000000000000000000000004021 192.0
DPH3_k127_5417749_1 - - - - 0.000000000000000000001156 106.0
DPH3_k127_5433026_0 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 352.0
DPH3_k127_5433026_1 FMN-dependent dehydrogenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000103 291.0
DPH3_k127_5435459_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 394.0
DPH3_k127_5435459_1 transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 375.0
DPH3_k127_5435459_10 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000003299 59.0
DPH3_k127_5435459_2 reverse transcriptase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 354.0
DPH3_k127_5435459_3 Domain of unknown function (DUF814) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 319.0
DPH3_k127_5435459_4 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001526 263.0
DPH3_k127_5435459_5 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000002249 256.0
DPH3_k127_5435459_6 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000008725 207.0
DPH3_k127_5435459_7 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000005246 213.0
DPH3_k127_5435459_8 reverse transcriptase - - - 0.000000000000000000000000000000000000000000000004487 188.0
DPH3_k127_5435459_9 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000001026 159.0
DPH3_k127_5458424_0 Phosphate transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 370.0
DPH3_k127_5458424_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002866 240.0
DPH3_k127_5458424_2 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000003556 146.0
DPH3_k127_5468353_0 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001251 281.0
DPH3_k127_5468353_1 DUF35 OB-fold domain, acyl-CoA-associated K07549 - - 0.0000000000001228 76.0
DPH3_k127_5488951_0 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000001433 134.0
DPH3_k127_5488951_1 MMPL family K07003 - - 0.000000000000000000009765 107.0
DPH3_k127_5488951_2 exporters of the RND superfamily K07003 - - 0.000003925 57.0
DPH3_k127_5493223_0 Transglycosylase - - - 7.578e-227 722.0
DPH3_k127_5493223_1 NlpC/P60 family K13694,K13695 - 3.4.17.13 0.0000000000000000000000005074 111.0
DPH3_k127_5493697_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 422.0
DPH3_k127_5493697_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000001904 267.0
DPH3_k127_5493911_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000005251 203.0
DPH3_k127_5493911_1 DNA polymerase III, delta subunit, C terminal K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000001417 172.0
DPH3_k127_5510812_0 PFAM acyl-CoA dehydrogenase domain protein K11731 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 557.0
DPH3_k127_5510812_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003865 286.0
DPH3_k127_5510812_2 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000002696 215.0
DPH3_k127_5510812_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000002344 160.0
DPH3_k127_5510812_4 amidohydrolase K07045 - - 0.0000000000000000000000000001616 122.0
DPH3_k127_5510812_5 PFAM beta-lactamase domain protein - - - 0.000000000000000000000005464 111.0
DPH3_k127_5512309_0 Aminotransferase class-V K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 421.0
DPH3_k127_5512309_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 380.0
DPH3_k127_5512309_2 PFAM Amino acid-binding ACT K03567 - - 0.000000009335 58.0
DPH3_k127_551289_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 370.0
DPH3_k127_551289_1 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit BcrC BadD HgdB - - - 0.00000000000000000000000000000000000000000000000000000000000000224 227.0
DPH3_k127_551289_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000005459 206.0
DPH3_k127_551289_3 CO dehydrogenase/acetyl-CoA synthase complex beta subunit - - - 0.000000000000000000000000000009669 128.0
DPH3_k127_5522288_0 Extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 506.0
DPH3_k127_5522288_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 403.0
DPH3_k127_5522288_2 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.0000002434 62.0
DPH3_k127_5530443_0 PFAM 2-nitropropane dioxygenase NPD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 538.0
DPH3_k127_5530443_1 Acyl-CoA dehydrogenase type 2 domain K00249,K11731 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 505.0
DPH3_k127_5530443_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 321.0
DPH3_k127_5530443_3 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000155 231.0
DPH3_k127_5530443_4 radical SAM domain protein - - - 0.00000000000000000000000000000000008243 144.0
DPH3_k127_5536096_0 formate C-acetyltransferase glycine radical K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1052.0
DPH3_k127_5536096_1 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 362.0
DPH3_k127_5536096_2 Bacterial regulatory proteins, tetR family - - - 0.000000000008917 74.0
DPH3_k127_5540736_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 5.19e-200 638.0
DPH3_k127_5540736_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000653 221.0
DPH3_k127_5548101_0 Penicillin amidase - - - 0.0 1024.0
DPH3_k127_5548101_1 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002898 278.0
DPH3_k127_5548101_2 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000002911 201.0
DPH3_k127_5548101_3 - - - - 0.000000000000000000000000000000000000000008979 166.0
DPH3_k127_5548101_4 - - - - 0.0000000000000000000000000000004966 129.0
DPH3_k127_5548101_5 - - - - 0.000000000000002548 89.0
DPH3_k127_5549549_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 364.0
DPH3_k127_5549549_1 Thioesterase superfamily K02614 - - 0.00000000000000000000000000007311 119.0
DPH3_k127_5575417_0 Permease family K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 428.0
DPH3_k127_5575417_1 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 345.0
DPH3_k127_5575417_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001273 248.0
DPH3_k127_5575417_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000277 101.0
DPH3_k127_5575417_4 response regulator - - - 0.000000000000000000003235 101.0
DPH3_k127_5594661_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000001303 241.0
DPH3_k127_5594661_1 Acetolactate synthase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000003661 174.0
DPH3_k127_5594661_2 - - - - 0.0000000000000000000000306 104.0
DPH3_k127_5631118_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.218e-308 964.0
DPH3_k127_5631118_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000002315 165.0
DPH3_k127_5633768_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 310.0
DPH3_k127_5633768_1 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000001036 196.0
DPH3_k127_5633768_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000003118 147.0
DPH3_k127_5686123_0 Acetyl-CoA hydrolase transferase N-terminal domain - - - 4.899e-274 859.0
DPH3_k127_5686123_1 Nitroreductase family - - - 0.0001492 49.0
DPH3_k127_5686123_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0003324 50.0
DPH3_k127_5690647_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 422.0
DPH3_k127_5690647_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000007124 182.0
DPH3_k127_5690647_2 Peptidase S24-like K03100 - 3.4.21.89 0.000000000000000000000000001502 114.0
DPH3_k127_5712097_0 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 8.26e-239 749.0
DPH3_k127_5712097_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000004162 195.0
DPH3_k127_5712097_2 Amidohydrolase family K06015 - 3.5.1.81 0.00000004378 56.0
DPH3_k127_5712970_0 Alpha amylase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009957 374.0
DPH3_k127_5712970_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 302.0
DPH3_k127_5712970_2 lipoprotein biosynthetic process K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.00000000000000000000000000000000000000000000000000000003113 207.0
DPH3_k127_5712970_3 Phosphoesterase - - - 0.0000000000000000000000000000000001431 139.0
DPH3_k127_5712970_4 Protein of unknown function (DUF2892) - - - 0.00000000000000009004 81.0
DPH3_k127_5712970_5 alpha/beta hydrolase fold - - - 0.00000000000006977 73.0
DPH3_k127_5743992_0 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 412.0
DPH3_k127_5743992_1 ATP-grasp domain - - - 0.0000000000000000000000000000000000000001373 166.0
DPH3_k127_5744711_0 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 574.0
DPH3_k127_5744711_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 536.0
DPH3_k127_5744711_10 Dinitrogenase iron-molybdenum cofactor - - - 0.0000001224 61.0
DPH3_k127_5744711_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 326.0
DPH3_k127_5744711_3 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 300.0
DPH3_k127_5744711_4 methyltransferase - - - 0.00000000000000000000000000000000000005372 152.0
DPH3_k127_5744711_5 nitrogen fixation - - - 0.00000000000000000000000000000001785 133.0
DPH3_k127_5744711_6 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000004883 119.0
DPH3_k127_5744711_7 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000002995 101.0
DPH3_k127_5744711_8 Iron-sulfur cluster assembly protein - - - 0.000000000002162 73.0
DPH3_k127_5744711_9 Dinitrogenase iron-molybdenum cofactor - - - 0.00000008388 60.0
DPH3_k127_5763750_0 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006219 392.0
DPH3_k127_5776755_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 432.0
DPH3_k127_5776755_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 317.0
DPH3_k127_5776755_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002517 260.0
DPH3_k127_5776755_3 all-trans-retinol 13,14-reductase activity - - - 0.00000000000004801 84.0
DPH3_k127_5801011_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009046 394.0
DPH3_k127_5801011_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 319.0
DPH3_k127_5801011_2 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000001696 220.0
DPH3_k127_5801011_3 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000000000000000002082 170.0
DPH3_k127_5850545_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 359.0
DPH3_k127_5850545_1 Sh3 type 3 domain protein - - - 0.0000000000000000000001376 111.0
DPH3_k127_5858693_0 Domain of unknown function (DUF1846) - - - 1.469e-255 799.0
DPH3_k127_5858693_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 428.0
DPH3_k127_5858693_10 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000001179 71.0
DPH3_k127_5858693_11 thiamine diphosphate biosynthetic process K03154 - - 0.000000000007499 69.0
DPH3_k127_5858693_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 388.0
DPH3_k127_5858693_3 PFAM tRNA synthetase, class II (D, K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 304.0
DPH3_k127_5858693_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004833 277.0
DPH3_k127_5858693_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000004375 232.0
DPH3_k127_5858693_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000004863 193.0
DPH3_k127_5858693_7 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000007406 184.0
DPH3_k127_5858693_8 Membrane K08988 - - 0.000000000000000000000000000000000000005051 153.0
DPH3_k127_5858693_9 Methylmuconolactone methyl-isomerase - - - 0.00000000000000000000000000000002781 136.0
DPH3_k127_5878901_0 - - - - 0.00000000000000000000000000000000000000000006957 171.0
DPH3_k127_5878901_1 - - - - 0.00000000000000000003402 96.0
DPH3_k127_5878901_2 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000005078 86.0
DPH3_k127_5899070_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 302.0
DPH3_k127_5899070_1 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000005542 261.0
DPH3_k127_5899070_2 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000008004 198.0
DPH3_k127_5899070_3 Starch synthase catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000001624 183.0
DPH3_k127_5899070_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000004956 97.0
DPH3_k127_5899070_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000002423 76.0
DPH3_k127_5899434_0 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 482.0
DPH3_k127_5917211_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 499.0
DPH3_k127_5917211_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 352.0
DPH3_k127_5917211_2 SMP-30/Gluconolaconase/LRE-like region K01045 - 3.1.1.2,3.1.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 302.0
DPH3_k127_5954496_0 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 331.0
DPH3_k127_5954496_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000007752 101.0
DPH3_k127_5954496_2 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000000001882 102.0
DPH3_k127_5954496_3 PFAM Mechanosensitive ion channel - - - 0.0000000001044 73.0
DPH3_k127_5960614_0 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006106 243.0
DPH3_k127_5960614_1 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000005353 130.0
DPH3_k127_5960614_2 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.00000000008004 63.0
DPH3_k127_5964610_0 Alpha beta hydrolase K22318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 441.0
DPH3_k127_5964610_1 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 351.0
DPH3_k127_5964610_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 322.0
DPH3_k127_5964610_3 CoA binding domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 323.0
DPH3_k127_5964610_4 Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment K01146 - - 0.000000000000000000000000000000000000000000000000000000000003675 219.0
DPH3_k127_5964610_5 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000001036 184.0
DPH3_k127_5964610_6 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000000000000000000000000000000005642 169.0
DPH3_k127_5964610_7 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000002873 83.0
DPH3_k127_5964610_8 AMP-binding enzyme C-terminal domain K02363,K04116 - 2.7.7.58,6.3.2.14 0.00000000001335 71.0
DPH3_k127_6037280_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 464.0
DPH3_k127_6037280_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000001439 162.0
DPH3_k127_6063504_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 2.474e-231 730.0
DPH3_k127_6063504_1 TIGRFAM formate dehydrogenase, alpha subunit K00336,K05299 - 1.17.1.10,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 636.0
DPH3_k127_6063504_2 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007198 284.0
DPH3_k127_6063504_3 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008671 248.0
DPH3_k127_6063504_4 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000003163 201.0
DPH3_k127_6081075_0 formate C-acetyltransferase glycine radical - - - 0.0 1041.0
DPH3_k127_6081075_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 7.372e-311 962.0
DPH3_k127_6081075_2 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 490.0
DPH3_k127_6081075_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 366.0
DPH3_k127_6081075_4 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 355.0
DPH3_k127_6081075_5 FCD domain K05799 - - 0.00000000000000000000000000000000001141 145.0
DPH3_k127_6094456_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 367.0
DPH3_k127_6094456_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002977 274.0
DPH3_k127_6094456_2 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.000000000000000000000000000000000000000000000000000003829 192.0
DPH3_k127_6107629_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 7.588e-208 662.0
DPH3_k127_6107629_1 lysine 2,3-aminomutase activity K01843,K19810 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 546.0
DPH3_k127_6107629_2 - - - - 0.00001554 50.0
DPH3_k127_6123645_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 317.0
DPH3_k127_6124059_0 PFAM von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 383.0
DPH3_k127_6124059_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 344.0
DPH3_k127_6124059_2 Psort location CytoplasmicMembrane, score - - - 0.000000001939 64.0
DPH3_k127_6124059_3 Oxygen tolerance - - - 0.00005496 50.0
DPH3_k127_6134972_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 508.0
DPH3_k127_6134972_1 nitrogen compound transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 394.0
DPH3_k127_6134972_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 320.0
DPH3_k127_6134972_3 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008046 256.0
DPH3_k127_6139694_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 484.0
DPH3_k127_6139694_1 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 484.0
DPH3_k127_6139694_2 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007048 272.0
DPH3_k127_6139694_3 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000001135 226.0
DPH3_k127_6139694_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000001272 129.0
DPH3_k127_6151089_0 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 295.0
DPH3_k127_6151089_1 Belongs to the IlvD Edd family K01687,K22396 - 4.2.1.82,4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002596 277.0
DPH3_k127_6151089_2 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000006589 190.0
DPH3_k127_6151089_3 Endonuclease Exonuclease Phosphatase - - - 0.000005157 58.0
DPH3_k127_6152056_0 Pilus formation protein N terminal region K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 306.0
DPH3_k127_6152056_1 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000000000008209 161.0
DPH3_k127_6152056_2 - - - - 0.0001093 54.0
DPH3_k127_6172274_0 50S ribosome-binding GTPase - - - 0.00000000000000000000000000000002349 144.0
DPH3_k127_6172274_1 Protein of unknown function, DUF481 - - - 0.000000000000000000003507 100.0
DPH3_k127_6186223_0 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 295.0
DPH3_k127_6186223_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000001112 91.0
DPH3_k127_6186223_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0002115 47.0
DPH3_k127_6188856_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 450.0
DPH3_k127_6199471_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 467.0
DPH3_k127_6199471_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 396.0
DPH3_k127_6199471_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000425 80.0
DPH3_k127_6201124_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000001668 164.0
DPH3_k127_6201124_1 Biopolymer transport protein ExbD/TolR - - - 0.00000000001037 72.0
DPH3_k127_6201124_2 Biopolymer transport protein ExbD/TolR - - - 0.00000007265 61.0
DPH3_k127_6201124_3 TIGRFAM intein N-terminal splicing region - - - 0.000001239 59.0
DPH3_k127_6201124_4 - - - - 0.00003435 52.0
DPH3_k127_6221792_0 NAD(P)H-binding K17947 - 5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 474.0
DPH3_k127_6221792_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004799 246.0
DPH3_k127_6221792_2 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.00000000000000000000000000000000000000000000003018 173.0
DPH3_k127_622363_0 - - - - 0.000009414 53.0
DPH3_k127_6234088_0 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005583 289.0
DPH3_k127_6234088_1 DJ-1/PfpI family K03152 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000537 190.0
DPH3_k127_6234088_2 Hydrolyzes mannosyl-3-phosphoglycerate (MPG) to form the osmolyte mannosylglycerate (MG) K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000007814 177.0
DPH3_k127_6237823_0 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.00000000000000000000000000000000000000000000000000000000000000001046 234.0
DPH3_k127_6237823_1 PFAM transposase, IS4 family protein K07487 - - 0.0000000000000000000000000000000000003119 150.0
DPH3_k127_6237823_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0003039 45.0
DPH3_k127_6241422_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 356.0
DPH3_k127_6241422_1 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000009063 256.0
DPH3_k127_6241422_2 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000005087 226.0
DPH3_k127_6241422_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000009516 226.0
DPH3_k127_6241422_4 ATP cone domain K07738 - - 0.0000000000000000000000000000000000000000000000000000000000001941 215.0
DPH3_k127_6241422_5 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000004685 216.0
DPH3_k127_6241422_6 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000003448 173.0
DPH3_k127_6241422_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000004215 126.0
DPH3_k127_6241422_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000021 99.0
DPH3_k127_6269233_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 644.0
DPH3_k127_6269233_1 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 306.0
DPH3_k127_6269233_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000002145 198.0
DPH3_k127_6269233_3 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.00000000001421 77.0
DPH3_k127_6281577_0 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 514.0
DPH3_k127_6281577_1 PFAM Uncharacterised protein family UPF0324 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 508.0
DPH3_k127_6281577_2 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 451.0
DPH3_k127_6281577_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 333.0
DPH3_k127_6281577_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 295.0
DPH3_k127_6281577_5 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001547 270.0
DPH3_k127_6281577_6 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001755 258.0
DPH3_k127_6281577_7 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.00000000000000000000000001165 120.0
DPH3_k127_6281577_8 regulation of response to stimulus K02014,K13730 - - 0.000000000001805 78.0
DPH3_k127_6283940_0 Insulinase (Peptidase family M16) K07263 - - 8.534e-197 647.0
DPH3_k127_6283940_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000001483 172.0
DPH3_k127_6283940_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000004397 149.0
DPH3_k127_6283940_3 Uracil-DNA glycosylase - - - 0.000000000002147 69.0
DPH3_k127_6283940_4 A G-specific adenine glycosylase K03575 - - 0.0006046 45.0
DPH3_k127_6294833_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 483.0
DPH3_k127_6294833_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 295.0
DPH3_k127_6294833_2 - - - - 0.00000000000000000000005998 102.0
DPH3_k127_6301312_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 507.0
DPH3_k127_6301312_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000006271 229.0
DPH3_k127_6301312_2 PFAM CoA binding domain K01905 - 6.2.1.13 0.00000000000000000000000000001049 121.0
DPH3_k127_6301312_3 PFAM blue (type 1) copper domain protein - - - 0.0001162 50.0
DPH3_k127_6301312_4 thiosulfate sulfurtransferase activity K01760 - 4.4.1.8 0.0002229 48.0
DPH3_k127_6319255_0 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 538.0
DPH3_k127_6319255_1 histidine kinase, HAMP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000471 284.0
DPH3_k127_6319255_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000002142 267.0
DPH3_k127_6319255_3 Prokaryotic N-terminal methylation motif K02650,K02655 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.00000000000000000001655 96.0
DPH3_k127_6346400_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000401 230.0
DPH3_k127_6346400_1 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000000000000000002383 191.0
DPH3_k127_6346400_2 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000003201 173.0
DPH3_k127_6346400_3 Putative peptidoglycan binding domain K21470 - - 0.00000000000000000000000001317 114.0
DPH3_k127_6346776_0 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit BcrC BadD HgdB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 318.0
DPH3_k127_6346776_1 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000404 283.0
DPH3_k127_635281_0 Magnesium chelatase, subunit ChlI - - - 6.758e-219 700.0
DPH3_k127_6378805_0 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 1.233e-234 738.0
DPH3_k127_6378805_1 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000004454 151.0
DPH3_k127_6385648_0 Acetyl-CoA hydrolase transferase N-terminal domain - - - 1.131e-281 878.0
DPH3_k127_6385648_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 1.176e-213 674.0
DPH3_k127_6385648_2 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 464.0
DPH3_k127_6385648_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001483 185.0
DPH3_k127_6385648_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000101 156.0
DPH3_k127_6385648_5 PFAM response regulator receiver - - - 0.0000000000000002084 85.0
DPH3_k127_6387481_0 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000008327 228.0
DPH3_k127_6402473_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 389.0
DPH3_k127_6402473_1 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.00000000000000000000000000000000000000000000000000000001008 201.0
DPH3_k127_6402473_2 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000000000000001303 173.0
DPH3_k127_6402473_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000001361 167.0
DPH3_k127_6402473_4 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000002838 167.0
DPH3_k127_6402473_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000002217 128.0
DPH3_k127_6402473_6 FeoA K04758 - - 0.0000000000000000001061 90.0
DPH3_k127_6411003_0 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 310.0
DPH3_k127_6414764_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 499.0
DPH3_k127_6414764_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 340.0
DPH3_k127_6414764_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 288.0
DPH3_k127_6414764_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002502 229.0
DPH3_k127_6421363_0 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000000000000002125 158.0
DPH3_k127_6432005_0 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000008178 119.0
DPH3_k127_6432005_1 3D domain protein K21471 - - 0.00000000000000000000000642 108.0
DPH3_k127_6432005_2 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000755 52.0
DPH3_k127_6437506_0 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006842 240.0
DPH3_k127_6438376_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 522.0
DPH3_k127_6438376_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000009317 189.0
DPH3_k127_6438376_2 Oxidoreductase FAD-binding domain - - - 0.000000000000000000002756 104.0
DPH3_k127_6459648_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.112e-270 842.0
DPH3_k127_6459648_1 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 304.0
DPH3_k127_6459648_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 - 0.000000000000000000001534 97.0
DPH3_k127_6481897_0 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 561.0
DPH3_k127_6481897_1 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 445.0
DPH3_k127_6481897_2 Abortive infection protein K07052 - - 0.00000000000000000000000001243 117.0
DPH3_k127_6481897_3 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 0.0000000000003198 82.0
DPH3_k127_6481897_4 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.0000001036 53.0
DPH3_k127_6490599_0 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 344.0
DPH3_k127_6490599_1 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002353 278.0
DPH3_k127_6490599_2 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000004407 140.0
DPH3_k127_6490599_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000131 122.0
DPH3_k127_6490599_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000973 67.0
DPH3_k127_6498784_0 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000004066 162.0
DPH3_k127_6498784_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000003646 117.0
DPH3_k127_6499101_0 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 318.0
DPH3_k127_6499101_1 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003075 271.0
DPH3_k127_6499101_2 FMN binding - - - 0.000000000000000000000000000000000000000000000000000008084 196.0
DPH3_k127_6499101_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000125 186.0
DPH3_k127_6499101_4 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000003615 160.0
DPH3_k127_654892_0 aconitate hydratase K01681 - 4.2.1.3 4.009e-307 956.0
DPH3_k127_654892_1 amino acid-binding ACT - - - 0.0000000000000000000000000001387 120.0
DPH3_k127_6560418_0 Protein involved in outer membrane biogenesis K07289,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 450.0
DPH3_k127_6560418_1 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 359.0
DPH3_k127_6560418_2 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000002701 211.0
DPH3_k127_6560418_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000003304 197.0
DPH3_k127_6560418_4 TatD related DNase K03424 - - 0.00000000000000000000000000000004215 140.0
DPH3_k127_6560418_5 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000008641 123.0
DPH3_k127_6560418_6 cellulose binding K07279 - - 0.000000001134 72.0
DPH3_k127_6560418_7 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000003131 58.0
DPH3_k127_6560418_8 AI-2E family transporter - - - 0.0001978 49.0
DPH3_k127_6572512_0 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 466.0
DPH3_k127_6572512_1 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 424.0
DPH3_k127_6572512_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 402.0
DPH3_k127_6572512_3 TIGRFAM ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 374.0
DPH3_k127_6572512_4 Nitrite and sulphite reductase 4Fe-4S K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 354.0
DPH3_k127_6572512_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 328.0
DPH3_k127_6572512_6 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04751 - - 0.000000000000000000000000000000000000000000001065 169.0
DPH3_k127_6572512_7 Tetratricopeptide repeat - - - 0.0000000000001052 78.0
DPH3_k127_6599057_0 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 1.544e-237 751.0
DPH3_k127_6599057_1 Magnesium chelatase, subunit ChlI - - - 2.305e-206 681.0
DPH3_k127_6599057_2 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000000002926 229.0
DPH3_k127_6599057_3 aminopeptidase activity K09612,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.10,3.4.11.24,3.4.11.6 0.00000000000000000000000000000000000000000000000000000000000005195 236.0
DPH3_k127_6599057_4 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.00000000000000000000000000000000000000000000000000000007664 206.0
DPH3_k127_6599057_5 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000002294 86.0
DPH3_k127_6599057_6 Transglycosylase SLT domain K08307,K12204,K16291 - - 0.00000000000002266 85.0
DPH3_k127_6603534_0 TonB dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 309.0
DPH3_k127_6603534_1 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000001842 94.0
DPH3_k127_6603534_2 conserved domain - - - 0.0000002891 61.0
DPH3_k127_6608939_0 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 391.0
DPH3_k127_6608939_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 380.0
DPH3_k127_6608939_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 324.0
DPH3_k127_6608939_3 Regulatory protein MarR - - - 0.00000000000000000000000000002448 122.0
DPH3_k127_6608939_5 ABC transporter related K01990 - - 0.0002496 43.0
DPH3_k127_6610625_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 589.0
DPH3_k127_6610625_1 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 493.0
DPH3_k127_6610625_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000288 289.0
DPH3_k127_6610625_3 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000001249 216.0
DPH3_k127_6610625_4 - - - - 0.0001854 49.0
DPH3_k127_6617977_0 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002157 283.0
DPH3_k127_6632561_0 helicase K03657 - 3.6.4.12 1.614e-202 651.0
DPH3_k127_6632561_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 595.0
DPH3_k127_6632561_2 Threonine synthase N terminus K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 445.0
DPH3_k127_6632561_3 alpha beta - - - 0.0000000000000000000000000000004617 133.0
DPH3_k127_6642776_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.696e-236 758.0
DPH3_k127_6642776_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 484.0
DPH3_k127_6642776_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 417.0
DPH3_k127_6680952_0 YdjC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002819 264.0
DPH3_k127_6680952_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000007823 108.0
DPH3_k127_6680952_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000001184 108.0
DPH3_k127_6689313_0 Pectinacetylesterase - - - 0.000000000000000000000000000000000000000000000001766 192.0
DPH3_k127_6689313_1 Subtilase family K14645 - - 0.00000000000000000000000000002084 132.0
DPH3_k127_6692563_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 531.0
DPH3_k127_6692563_1 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 480.0
DPH3_k127_6692563_2 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 454.0
DPH3_k127_6692563_3 adenosyltransferase K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000684 214.0
DPH3_k127_6692563_4 Transcriptional regulator - - - 0.0000000000000000000000000000008734 127.0
DPH3_k127_6692563_5 - K07275 - - 0.00000002798 64.0
DPH3_k127_67075_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K14086 - - 8.503e-289 896.0
DPH3_k127_67075_1 PFAM Ethanolamine ammonia lyase large subunit K03735 - 4.3.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 551.0
DPH3_k127_6730436_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000001095 216.0
DPH3_k127_6730436_1 Tellurite resistance protein TehB - - - 0.000000000000000000003302 98.0
DPH3_k127_6770611_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 504.0
DPH3_k127_6770611_1 ATP-NAD kinase - - - 0.0000000000000000000000000000000000000000000000000000002165 198.0
DPH3_k127_6770611_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000003818 186.0
DPH3_k127_6770611_3 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000008561 177.0
DPH3_k127_6793539_0 - - - - 0.000000000000000000000000000000000000000000000001868 183.0
DPH3_k127_6793539_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000001007 117.0
DPH3_k127_6796513_0 PFAM cobalamin (vitamin B12) biosynthesis CbiM K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 326.0
DPH3_k127_6796513_1 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000000000000000000000000000000000000000000000000000000000006636 226.0
DPH3_k127_6796513_2 AAA domain, putative AbiEii toxin, Type IV TA system K02006,K02008 - - 0.0000000000000000000000000000000000002288 147.0
DPH3_k127_6797303_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.695e-223 711.0
DPH3_k127_6797303_1 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 423.0
DPH3_k127_6797303_2 Bacterial sugar transferase K03606,K20997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 370.0
DPH3_k127_6797303_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000007575 188.0
DPH3_k127_6797303_4 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000001089 192.0
DPH3_k127_6797303_5 glycosyl transferase group 1 K12993 - - 0.0000000000000000000000000000000000000000000002308 172.0
DPH3_k127_6797303_6 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000001123 143.0
DPH3_k127_6797303_7 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000001313 145.0
DPH3_k127_6797303_8 Belongs to the UPF0296 family K09777 - - 0.000000000000000000000004702 106.0
DPH3_k127_6797303_9 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000002849 91.0
DPH3_k127_6799271_0 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000002193 103.0
DPH3_k127_6799271_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000001148 104.0
DPH3_k127_6805435_0 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 539.0
DPH3_k127_6805435_1 Transposase - - - 0.00000000007852 70.0
DPH3_k127_6805435_2 COG2801 Transposase and inactivated derivatives - - - 0.0000002247 53.0
DPH3_k127_680575_0 Heat shock protein 70 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 352.0
DPH3_k127_680575_1 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000000000000000004826 213.0
DPH3_k127_680575_2 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000001071 196.0
DPH3_k127_680575_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000769 162.0
DPH3_k127_680575_4 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.000000000000000000005187 100.0
DPH3_k127_680575_5 Psort location Cytoplasmic, score K00945 - 2.7.4.25 0.000000000000000000005654 104.0
DPH3_k127_6830320_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 589.0
DPH3_k127_6830320_1 - - - - 0.000005802 53.0
DPH3_k127_6847740_0 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 428.0
DPH3_k127_6847740_1 Enoyl-(Acyl carrier protein) reductase K00059,K18009,K19548 - 1.1.1.100,1.1.1.304,1.1.1.385,1.1.1.76 0.00000000000000000000000000000000000000000000000000000006112 207.0
DPH3_k127_6847740_2 cobalamin binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000004491 161.0
DPH3_k127_6847740_3 PFAM Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.000000000000000000000000000000000002984 148.0
DPH3_k127_6880677_0 Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase K00192 GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000008676 239.0
DPH3_k127_6880677_1 oxidoreductase activity K03924,K04748,K07114 - - 0.000001874 61.0
DPH3_k127_6883467_0 DNA photolyase activity K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000192 251.0
DPH3_k127_6883467_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000001077 242.0
DPH3_k127_6883467_2 Glutaredoxin - - - 0.0000000000001102 75.0
DPH3_k127_6883467_3 ParB-like nuclease domain K03497 - - 0.00000009331 63.0
DPH3_k127_6912482_0 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000001656 193.0
DPH3_k127_6912482_1 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000001186 101.0
DPH3_k127_6912482_2 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000002259 102.0
DPH3_k127_69160_0 PFAM heat shock protein DnaJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003353 239.0
DPH3_k127_6938869_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K18501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 588.0
DPH3_k127_6938869_1 cheY-homologous receiver domain - - - 0.0000000000000000000000006131 107.0
DPH3_k127_6938869_2 lyase activity - - - 0.000000004314 67.0
DPH3_k127_6954269_0 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000001808 216.0
DPH3_k127_6954269_1 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000007487 171.0
DPH3_k127_6959424_0 export protein K01991 - - 0.00000000000000000000002128 108.0
DPH3_k127_6959424_1 extracellular polysaccharide biosynthetic process K07011,K08252,K16554 - 2.7.10.1 0.0000000000003349 79.0
DPH3_k127_6978930_0 Uncharacterised protein family UPF0052 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 325.0
DPH3_k127_6978930_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005864 291.0
DPH3_k127_7030828_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 6.689e-208 668.0
DPH3_k127_7030828_1 Galactose oxidase, central domain - - - 0.000000002996 64.0
DPH3_k127_7036447_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000001836 203.0
DPH3_k127_7036447_1 - - - - 0.000000000000000000000000000000000000000008357 158.0
DPH3_k127_7036447_2 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000005603 151.0
DPH3_k127_7036447_3 Histidine kinase - - - 0.00000000003506 76.0
DPH3_k127_7042252_0 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 452.0
DPH3_k127_7042252_1 PFAM Rho termination factor K09942 - - 0.00000000000009771 82.0
DPH3_k127_7059059_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 1.072e-264 822.0
DPH3_k127_7059059_1 Amidohydrolase family K01465,K06015 - 3.5.1.81,3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005907 268.0
DPH3_k127_7066026_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 1.137e-213 673.0
DPH3_k127_7066026_1 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 452.0
DPH3_k127_7066026_2 - - - - 0.00000000000000000000000000000003342 127.0
DPH3_k127_7073653_0 PFAM Sodium sulphate symporter K14445 - - 2.268e-246 770.0
DPH3_k127_7073653_1 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000002443 190.0
DPH3_k127_7073653_2 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000001916 183.0
DPH3_k127_7073653_3 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000002742 137.0
DPH3_k127_7080615_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897,K02182,K22133 - 6.2.1.3,6.2.1.48,6.2.1.8 1.09e-218 690.0
DPH3_k127_7080615_1 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 606.0
DPH3_k127_7080615_2 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000474 190.0
DPH3_k127_7080615_3 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000008313 137.0
DPH3_k127_7080615_5 - - - - 0.0000000005322 67.0
DPH3_k127_7080615_6 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00007344 45.0
DPH3_k127_7085079_0 Radical SAM superfamily K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008257 386.0
DPH3_k127_7085079_1 Quinohemoprotein amine dehydrogenase, alpha subunit domain II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 339.0
DPH3_k127_7085079_2 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 334.0
DPH3_k127_7085079_3 Quinohemoprotein amine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007877 275.0
DPH3_k127_7085079_4 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000002038 166.0
DPH3_k127_7085079_5 Cytochrome c K00405 - - 0.0000000000000000000000000000000004986 149.0
DPH3_k127_7085079_6 peptidase U32 - - - 0.00000000005509 71.0
DPH3_k127_7105005_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.028e-229 718.0
DPH3_k127_7105005_1 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 349.0
DPH3_k127_7105005_2 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000004887 113.0
DPH3_k127_7126167_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 411.0
DPH3_k127_7126167_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 411.0
DPH3_k127_7126167_2 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 376.0
DPH3_k127_7126167_3 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 338.0
DPH3_k127_7126167_4 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000000000000000000007859 246.0
DPH3_k127_7126167_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000001147 185.0
DPH3_k127_7126167_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000007973 178.0
DPH3_k127_7126167_7 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000001939 148.0
DPH3_k127_7126167_8 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000687 128.0
DPH3_k127_712907_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 401.0
DPH3_k127_712907_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002379 240.0
DPH3_k127_712907_2 Jag_N K06346 - - 0.000000000000000000000000000000000000000004683 166.0
DPH3_k127_7166586_0 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000164 265.0
DPH3_k127_7166586_1 TatD family K03424 - - 0.000000000000000000000000000000001565 133.0
DPH3_k127_7166586_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000002262 67.0
DPH3_k127_7166903_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 422.0
DPH3_k127_7166903_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 311.0
DPH3_k127_7166903_2 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000007218 252.0
DPH3_k127_7166903_3 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000003525 216.0
DPH3_k127_7166903_4 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000001187 189.0
DPH3_k127_7179538_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 4.024e-240 764.0
DPH3_k127_7179538_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000003393 152.0
DPH3_k127_7179538_2 - - - - 0.00000000000000000000000000000000001636 145.0
DPH3_k127_7179538_3 Diphthamide synthase - - - 0.000000000000000000000206 97.0
DPH3_k127_7186194_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 441.0
DPH3_k127_7186194_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0050789,GO:0050793,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0065007,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 308.0
DPH3_k127_7207624_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 1.534e-207 655.0
DPH3_k127_7207624_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 348.0
DPH3_k127_7207624_2 PFAM UspA domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005902 277.0
DPH3_k127_7207624_3 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000007094 198.0
DPH3_k127_7207624_4 PFAM UspA domain protein - - - 0.000000000231 64.0
DPH3_k127_7209837_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 460.0
DPH3_k127_7209837_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 310.0
DPH3_k127_7209837_2 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000002445 246.0
DPH3_k127_7209837_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
DPH3_k127_72259_0 cell adhesion K02024 - - 0.000000172 63.0
DPH3_k127_72302_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000004915 184.0
DPH3_k127_72302_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000002376 188.0
DPH3_k127_72302_2 acyl-CoA dehydrogenase K06446 - - 0.00000000000000000000000000000009912 128.0
DPH3_k127_72302_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000002975 92.0
DPH3_k127_723459_0 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 458.0
DPH3_k127_723459_1 Methionine synthase B12-binding module cap domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003471 247.0
DPH3_k127_723459_2 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000001431 149.0
DPH3_k127_723459_3 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 0.0000000000000000000000000001574 122.0
DPH3_k127_723459_4 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.00000000000000000000772 98.0
DPH3_k127_723459_5 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.0000000000000000000597 93.0
DPH3_k127_7246492_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 356.0
DPH3_k127_7246492_1 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002652 241.0
DPH3_k127_7246492_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000003459 216.0
DPH3_k127_7256802_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000001375 241.0
DPH3_k127_7256802_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001958 221.0
DPH3_k127_7280554_0 Dehydratase family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000005562 257.0
DPH3_k127_7280554_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.0000000000000000000000000000000000000002461 153.0
DPH3_k127_72835_0 melibiose metabolic process K01222,K07406 - 3.2.1.22,3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 413.0
DPH3_k127_72835_1 PFAM alpha amylase, catalytic K01176,K01187 - 3.2.1.1,3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 338.0
DPH3_k127_72835_2 - - - - 0.00000000000000000001218 105.0
DPH3_k127_7284116_0 PFAM Silent information regulator protein Sir2 K12410 - - 0.000000000000000000000000000000000000000000000000000000000001899 218.0
DPH3_k127_7284116_1 extracellular polysaccharide biosynthetic process K00568,K03561,K07011,K20444 - 2.1.1.222,2.1.1.64 0.00000000000000000000000003729 120.0
DPH3_k127_7284116_2 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000002002 82.0
DPH3_k127_7284343_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1863.0
DPH3_k127_7284343_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 305.0
DPH3_k127_7284343_2 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001635 252.0
DPH3_k127_7284343_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000005683 218.0
DPH3_k127_7284343_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000001983 156.0
DPH3_k127_7284343_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000002755 155.0
DPH3_k127_7284343_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000008454 100.0
DPH3_k127_7284343_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000618 89.0
DPH3_k127_7284343_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000001598 69.0
DPH3_k127_7284513_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 419.0
DPH3_k127_7284513_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000006507 227.0
DPH3_k127_7284513_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000001724 168.0
DPH3_k127_7284513_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000003157 159.0
DPH3_k127_7284513_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000005112 152.0
DPH3_k127_7284513_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000007266 136.0
DPH3_k127_7284513_6 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000007939 115.0
DPH3_k127_7284513_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000008454 100.0
DPH3_k127_7286418_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 3.539e-314 972.0
DPH3_k127_7286418_1 helicase activity - - - 4.76e-311 975.0
DPH3_k127_7286418_2 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term K00441 - 1.12.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 402.0
DPH3_k127_7286418_3 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002896 276.0
DPH3_k127_7286418_4 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001505 229.0
DPH3_k127_7286418_5 Amidohydrolase K07045 - - 0.00001213 51.0
DPH3_k127_7286418_6 PFAM Rhodanese domain protein - - - 0.00001273 54.0
DPH3_k127_7291485_0 membrane organization - - - 0.0000000000000000000000000005844 130.0
DPH3_k127_7291485_1 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit, BcrC BadD HgdB K04113 - 1.3.7.8 0.000001674 49.0
DPH3_k127_7306189_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 543.0
DPH3_k127_7311231_0 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 319.0
DPH3_k127_7311231_1 Arginase family - - - 0.00000000000000003375 91.0
DPH3_k127_7319691_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 460.0
DPH3_k127_7319691_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 432.0
DPH3_k127_7319691_2 Prephenate dehydratase K14170 GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 366.0
DPH3_k127_7319691_3 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 301.0
DPH3_k127_7319691_4 cytidylate kinase activity K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000001557 205.0
DPH3_k127_7333052_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 446.0
DPH3_k127_7333052_1 ferredoxin oxidoreductase K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 347.0
DPH3_k127_7333052_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005826 253.0
DPH3_k127_7333052_3 Fungalysin metallopeptidase (M36) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001959 251.0
DPH3_k127_7333052_4 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000202 219.0
DPH3_k127_7333052_5 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000002943 145.0
DPH3_k127_7333052_6 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.0000000000000000000000000543 113.0
DPH3_k127_7333052_7 - - - - 0.00000002594 57.0
DPH3_k127_7333052_8 - - - - 0.000126 52.0
DPH3_k127_7364037_0 4Fe-4S ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 421.0
DPH3_k127_7364037_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001752 271.0
DPH3_k127_7364037_2 NADH ubiquinone oxidoreductase 24 kD subunit - - - 0.000000000000000006324 86.0
DPH3_k127_737831_0 nuclease K01174 - 3.1.31.1 0.000008014 57.0
DPH3_k127_739635_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1483.0
DPH3_k127_739635_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 466.0
DPH3_k127_739635_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 306.0
DPH3_k127_739635_3 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000000000006728 170.0
DPH3_k127_7405151_0 cytidyltransferase-related domain K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004591 258.0
DPH3_k127_7405151_1 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000557 237.0
DPH3_k127_7405151_2 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000007044 220.0
DPH3_k127_7405151_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000007404 218.0
DPH3_k127_7405151_4 Tetratricopeptide repeat - - - 0.000000000000002581 84.0
DPH3_k127_7424677_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 512.0
DPH3_k127_7424677_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 262.0
DPH3_k127_7442177_0 PFAM peptidase S45 penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 393.0
DPH3_k127_7442177_1 Domain of unknown function (DUF3393) - - - 0.00000000000000000000000000000002154 138.0
DPH3_k127_7456410_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000009717 77.0
DPH3_k127_7456410_1 Type II transport protein GspH K08084 - - 0.000003622 57.0
DPH3_k127_7482452_0 PFAM peptidase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 396.0
DPH3_k127_7482452_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
DPH3_k127_7482452_2 ABC transporter C-terminal domain K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000153 234.0
DPH3_k127_7482452_3 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000006385 153.0
DPH3_k127_7488209_0 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 498.0
DPH3_k127_7488209_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000001182 199.0
DPH3_k127_7488209_2 PilZ domain - - - 0.00000000000324 71.0
DPH3_k127_7500818_0 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 479.0
DPH3_k127_7500818_1 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000003497 198.0
DPH3_k127_7500818_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000003202 77.0
DPH3_k127_7500818_3 aminopeptidase N - - - 0.0000009021 60.0
DPH3_k127_7508842_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.143e-280 876.0
DPH3_k127_7508842_1 Nitrogen-fixing NifU domain protein - - - 0.000000000000000000000027 101.0
DPH3_k127_7508842_2 Ribonucleotide reductase, all-alpha domain K00525 - 1.17.4.1 0.00000000006488 68.0
DPH3_k127_7586824_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 9.617e-293 912.0
DPH3_k127_7590861_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 454.0
DPH3_k127_7590861_1 Cellulose biosynthesis protein BcsQ K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001936 254.0
DPH3_k127_7590861_2 Histidine kinase - - - 0.0000000000000000000000000000000001129 139.0
DPH3_k127_7590861_3 Outer membrane protein beta-barrel domain - - - 0.000000000001289 68.0
DPH3_k127_7613396_0 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 345.0
DPH3_k127_7613396_1 Domain of unknown function (DUF4037) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003146 239.0
DPH3_k127_7613396_2 Protein of unknown function (DUF4125) - - - 0.000000000000000002533 93.0
DPH3_k127_7626765_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.361e-247 781.0
DPH3_k127_7626765_1 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.0000000000000000000000000000000000000000000000000008211 197.0
DPH3_k127_7626765_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000001095 184.0
DPH3_k127_7626765_3 regulation of translation K03530,K05788 - - 0.000000000000000000000000598 108.0
DPH3_k127_7626765_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000007641 98.0
DPH3_k127_7626765_5 repeat-containing protein - - - 0.000000002261 70.0
DPH3_k127_7626765_6 Lysin motif - - - 0.000008841 57.0
DPH3_k127_7633291_0 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000119 291.0
DPH3_k127_7633291_1 Bacterial flagellin N-terminal helical region K02397 - - 0.000000000000000000000000000000000000007652 156.0
DPH3_k127_7633291_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000003509 81.0
DPH3_k127_7633291_3 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.0000000000000004167 84.0
DPH3_k127_7678832_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 428.0
DPH3_k127_7678832_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 293.0
DPH3_k127_7678832_2 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 295.0
DPH3_k127_7678832_3 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K00806,K15888 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002614 285.0
DPH3_k127_7678832_4 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006853 271.0
DPH3_k127_7678832_5 Cellulose biosynthesis protein BcsQ K03496 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000009987 188.0
DPH3_k127_7678832_6 NUDIX domain - - - 0.0000000000000000000000000000000000000002726 154.0
DPH3_k127_7689506_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007905 276.0
DPH3_k127_7689506_1 Belongs to the peptidase M24B family - - - 0.00000000000000000000000000002852 132.0
DPH3_k127_7689506_2 HAD-hyrolase-like K07025 - - 0.0000000639 57.0
DPH3_k127_7689506_3 Pentapeptide - - - 0.000007312 51.0
DPH3_k127_7691039_0 Peptidase M16C associated K06972 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 397.0
DPH3_k127_7691039_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000008574 209.0
DPH3_k127_7695485_0 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 427.0
DPH3_k127_7695485_1 Bacterial regulatory proteins TetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003704 268.0
DPH3_k127_7695485_2 IMP dehydrogenase / GMP reductase domain K00459,K02371 - 1.13.12.16,1.3.1.9 0.000003497 51.0
DPH3_k127_7695485_3 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.0002677 46.0
DPH3_k127_7697944_0 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 285.0
DPH3_k127_7697944_1 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000007141 248.0
DPH3_k127_7707111_0 Belongs to the thiolase family K00626 - 2.3.1.9 2.442e-205 647.0
DPH3_k127_7707111_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 6.355e-202 639.0
DPH3_k127_7707111_2 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 471.0
DPH3_k127_7707111_3 Metallophosphoesterase, calcineurin superfamily - - - 0.00000000000000000000000000000000000000000000000000001265 196.0
DPH3_k127_7707111_4 - - - - 0.0000000000000000000000008729 112.0
DPH3_k127_7707111_5 - - - - 0.0000000000000000004711 94.0
DPH3_k127_7707111_6 Bacterial regulatory proteins, tetR family - - - 0.00000000001112 74.0
DPH3_k127_7712460_0 CoA-transferase activity K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 392.0
DPH3_k127_7712460_1 CoA-transferase activity K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000001338 244.0
DPH3_k127_7712460_2 Histidine kinase - - - 0.00000000000000000002646 93.0
DPH3_k127_7717652_0 Collagenase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009087 270.0
DPH3_k127_7717652_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000001815 139.0
DPH3_k127_7719123_0 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 399.0
DPH3_k127_7734958_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 352.0
DPH3_k127_7734958_1 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004722 230.0
DPH3_k127_7734958_2 PFAM Cyclic nucleotide-binding domain - - - 0.0000000006467 66.0
DPH3_k127_7743823_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 3.925e-226 708.0
DPH3_k127_7743823_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 400.0
DPH3_k127_7743823_2 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000000002643 190.0
DPH3_k127_7746923_0 COG2199 FOG GGDEF domain K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000002941 222.0
DPH3_k127_7746923_1 Tetratricopeptide repeats - - - 0.0000005354 63.0
DPH3_k127_7801475_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.111e-235 742.0
DPH3_k127_7814667_0 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 1.853e-283 891.0
DPH3_k127_7814667_1 PFAM Type II secretion system protein E K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 506.0
DPH3_k127_7814667_2 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 401.0
DPH3_k127_7814667_3 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000003422 222.0
DPH3_k127_7814667_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0003797 52.0
DPH3_k127_7840071_0 Predicted metal-binding protein (DUF2284) - - - 0.0000000000000000000000000000000000000000000009241 171.0
DPH3_k127_7840071_1 MMPL family K07003 - - 0.00000000000000000000000000000000000008254 159.0
DPH3_k127_7840071_2 PFAM regulatory protein TetR - - - 0.0000000000000001243 89.0
DPH3_k127_7840071_3 Oxidoreductase K00313 - - 0.00004861 51.0
DPH3_k127_7841779_0 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000005016 221.0
DPH3_k127_7841779_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000001122 179.0
DPH3_k127_7841779_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000007651 177.0
DPH3_k127_7841779_3 Protein of unknown function (DUF3604) - - - 0.0000000000000000000000000001623 121.0
DPH3_k127_7849148_0 BadF BadG BcrA BcrD - - - 0.0 1049.0
DPH3_k127_7849148_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 431.0
DPH3_k127_7849148_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.00000000000000000000000000000000000000000000000000008427 197.0
DPH3_k127_7849148_11 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000003207 190.0
DPH3_k127_7849148_12 cobalamin binding - - - 0.0000000000000000000000000000000000000000002358 164.0
DPH3_k127_7849148_13 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000004078 125.0
DPH3_k127_7849148_14 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000003639 90.0
DPH3_k127_7849148_15 PFAM Outer membrane efflux protein - - - 0.0000005844 62.0
DPH3_k127_7849148_16 TIGRFAM methylmalonyl-CoA mutase N-terminal domain - - - 0.00000645 52.0
DPH3_k127_7849148_17 Methylmuconolactone methyl-isomerase - - - 0.0003276 44.0
DPH3_k127_7849148_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 397.0
DPH3_k127_7849148_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 329.0
DPH3_k127_7849148_4 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 309.0
DPH3_k127_7849148_5 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 321.0
DPH3_k127_7849148_6 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 299.0
DPH3_k127_7849148_7 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008951 303.0
DPH3_k127_7849148_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001593 276.0
DPH3_k127_7849148_9 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000001194 257.0
DPH3_k127_7849932_0 PFAM Phenazine biosynthesis PhzC PhzF protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 353.0
DPH3_k127_7849932_1 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000005788 181.0
DPH3_k127_7863936_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 391.0
DPH3_k127_786526_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1133.0
DPH3_k127_786526_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 454.0
DPH3_k127_786526_2 CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 388.0
DPH3_k127_786526_3 Putative Fe-S cluster K00197 - 2.1.1.245 0.00000000000000003556 81.0
DPH3_k127_7888928_0 Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 389.0
DPH3_k127_7888928_1 ABC transporter K06020 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 371.0
DPH3_k127_7888928_2 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 333.0
DPH3_k127_7888928_3 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000001773 228.0
DPH3_k127_7888928_4 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000006609 195.0
DPH3_k127_7888928_5 PFAM Nitroreductase - - - 0.00000000000000000000009752 108.0
DPH3_k127_7888928_6 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00009826 54.0
DPH3_k127_7899318_0 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000003428 233.0
DPH3_k127_7899318_1 PFAM metal-dependent phosphohydrolase, HD sub domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000003563 210.0
DPH3_k127_7899318_2 Lysin motif K06194 - - 0.0000000000000000000000000000000000000000002985 171.0
DPH3_k127_7899318_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000005572 109.0
DPH3_k127_7899318_4 - - - - 0.00000000000001648 81.0
DPH3_k127_7899318_5 Glutathione S-transferase, N-terminal domain - - - 0.000000000003373 72.0
DPH3_k127_7909027_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 3.761e-223 707.0
DPH3_k127_7909027_1 Sh3 type 3 domain protein - - - 0.0000000000003958 80.0
DPH3_k127_7967410_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.358e-213 680.0
DPH3_k127_7967410_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 602.0
DPH3_k127_7967410_2 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009419 282.0
DPH3_k127_7967410_3 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000003252 254.0
DPH3_k127_7967410_4 Fe-S cluster domain protein - - - 0.0000000000000000000000000000000000000000000000000000000007529 211.0
DPH3_k127_7967410_5 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000002552 199.0
DPH3_k127_7973679_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 336.0
DPH3_k127_7973679_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000001137 271.0
DPH3_k127_7987649_0 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001053 272.0
DPH3_k127_7987649_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000002215 113.0
DPH3_k127_7989319_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 4.476e-249 776.0
DPH3_k127_7989319_1 PFAM sodium hydrogen exchanger - - - 8.503e-230 721.0
DPH3_k127_7989319_10 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000009707 61.0
DPH3_k127_7989319_2 Alkyl sulfatase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 516.0
DPH3_k127_7989319_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 490.0
DPH3_k127_7989319_4 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 419.0
DPH3_k127_7989319_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 310.0
DPH3_k127_7989319_6 Acyltransferase C-terminus K13513,K13523 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000007858 195.0
DPH3_k127_7989319_7 FCD K05799 - - 0.00000000000000000000000000000000000001211 154.0
DPH3_k127_7989319_8 - - - - 0.0000000000000000000007121 100.0
DPH3_k127_8020941_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000008456 227.0
DPH3_k127_8020941_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000009237 124.0
DPH3_k127_8020941_2 diguanylate cyclase - - - 0.0000000000000000000000000003687 125.0
DPH3_k127_8021935_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002233 274.0
DPH3_k127_8021935_1 Lipoprotein - - - 0.000000000000000000000000003502 121.0
DPH3_k127_8021935_2 - - - - 0.00000000003232 72.0
DPH3_k127_8036468_0 Ammonium Transporter Family K03320 - - 1.914e-216 678.0
DPH3_k127_8036468_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 424.0
DPH3_k127_8036468_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 298.0
DPH3_k127_8036468_3 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007438 276.0
DPH3_k127_8059364_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000002234 193.0
DPH3_k127_8059364_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000002354 89.0
DPH3_k127_8086073_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000005796 267.0
DPH3_k127_8086073_1 Enoyl-(Acyl carrier protein) reductase K19811 - 1.1.1.357 0.000000000000000000000000000000000000000000000000000000000000000000000009341 251.0
DPH3_k127_8086073_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000003041 196.0
DPH3_k127_8086073_3 Flavin containing amine oxidoreductase - - - 0.00000000000000000000001445 112.0
DPH3_k127_8086073_4 helix_turn_helix, mercury resistance - - - 0.0000000001853 71.0
DPH3_k127_8086073_5 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000001933 68.0
DPH3_k127_8092524_0 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000894 192.0
DPH3_k127_8092524_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0001368 55.0
DPH3_k127_8092524_2 protein involved in outer membrane biogenesis K07289 - - 0.0001802 55.0
DPH3_k127_8107137_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182,K13776 - 6.2.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 558.0
DPH3_k127_8107137_1 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 359.0
DPH3_k127_8107137_2 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000000000002347 195.0
DPH3_k127_8127015_0 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000004969 188.0
DPH3_k127_8127015_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700,K01236 - 2.4.1.18,3.2.1.141 0.00000000000000000000000000000000000000002616 163.0
DPH3_k127_8128441_0 Transketolase, central region K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001238 261.0
DPH3_k127_8128441_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001052 242.0
DPH3_k127_8128441_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
DPH3_k127_8128441_3 Alcohol dehydrogenase GroES-like domain - - - 0.0000179 51.0
DPH3_k127_8166160_0 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 3.56e-202 632.0
DPH3_k127_8166160_1 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000001785 121.0
DPH3_k127_8166160_2 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000003537 50.0
DPH3_k127_8173956_0 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 308.0
DPH3_k127_8173956_1 Major facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000001291 194.0
DPH3_k127_8173956_2 Conserved repeat domain - - - 0.0001136 53.0
DPH3_k127_8173956_3 PFAM Cyclic nucleotide-binding domain - - - 0.0001282 51.0
DPH3_k127_8199433_0 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 547.0
DPH3_k127_8208595_0 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 382.0
DPH3_k127_8208595_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 291.0
DPH3_k127_8208595_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000009173 109.0
DPH3_k127_8210226_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 299.0
DPH3_k127_8210226_1 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000002232 170.0
DPH3_k127_8210226_2 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000005393 122.0
DPH3_k127_8210226_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.00000000000000008817 81.0
DPH3_k127_8210226_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000008811 79.0
DPH3_k127_8224392_0 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit BcrC BadD HgdB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006967 286.0
DPH3_k127_8224392_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001951 278.0
DPH3_k127_8224392_2 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002463 260.0
DPH3_k127_8224392_3 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002396 250.0
DPH3_k127_8224392_4 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000001546 196.0
DPH3_k127_8224392_5 CO dehydrogenase/acetyl-CoA synthase complex beta subunit - - - 0.00000000000000000000000000000000002431 150.0
DPH3_k127_8224392_6 Sterol carrier protein - - - 0.000000000000203 76.0
DPH3_k127_8224392_7 PFAM ATPase BadF BadG BcrA BcrD type - - - 0.0003718 44.0
DPH3_k127_8245224_0 Aminotransferase class-V K00283 - 1.4.4.2 1.632e-194 622.0
DPH3_k127_8245224_1 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 503.0
DPH3_k127_8245224_2 ATP-NAD AcoX kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000182 247.0
DPH3_k127_8249564_0 Domain of unknown function (DUF3463) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 404.0
DPH3_k127_8249564_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000167 259.0
DPH3_k127_8249564_2 Pfam:DUF422 - - - 0.000000000000000000000000000000000000000000000000000000000002791 218.0
DPH3_k127_8249564_3 long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000008486 160.0
DPH3_k127_8249564_4 COG1657 Squalene cyclase K06045 - 4.2.1.129,5.4.99.17 0.000000000000000000000000000000001763 131.0
DPH3_k127_8288257_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.808e-213 678.0
DPH3_k127_8288257_1 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 529.0
DPH3_k127_8288257_2 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 411.0
DPH3_k127_8288257_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 340.0
DPH3_k127_8288257_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000001867 148.0
DPH3_k127_8288257_5 family UPF0066 - - - 0.00000000000000000000000000000001697 136.0
DPH3_k127_8288257_6 regulatory protein, FmdB family - - - 0.0000000000008586 72.0
DPH3_k127_8288257_7 PBS lyase HEAT-like repeat - - - 0.00000000001682 74.0
DPH3_k127_8288257_8 polysaccharide export K01991,K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000001004 72.0
DPH3_k127_8288257_9 - - - - 0.0000000001664 63.0
DPH3_k127_8291588_0 dEAD DEAH box helicase K06877 - - 9.869e-274 863.0
DPH3_k127_8291588_1 Exonuclease K07502 - - 0.00000000000000000000000000000000000000000000000001189 197.0
DPH3_k127_8291588_2 PFAM Protein-tyrosine phosphatase, low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.000000000000000000000000000006176 125.0
DPH3_k127_8291588_3 PFAM Tetratricopeptide - - - 0.0000000004538 70.0
DPH3_k127_8299501_0 UTP--glucose-1-phosphate uridylyltransferase K00972,K12447 - 2.7.7.23,2.7.7.64,2.7.7.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 427.0
DPH3_k127_8299501_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 357.0
DPH3_k127_8299501_2 Major facilitator K08218 - - 0.0000000000000000000000000000000000000000000000000000000725 205.0
DPH3_k127_8299501_3 PFAM Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000000001919 113.0
DPH3_k127_8299501_4 all-trans-retinol 13,14-reductase activity K01854,K09845,K10027 - 1.3.99.26,1.3.99.27,1.3.99.28,1.3.99.29,1.3.99.31,5.4.99.9 0.0000008774 61.0
DPH3_k127_8319819_0 PAS domain - - - 0.000000000000000000000000000000000000000002605 170.0
DPH3_k127_8356579_0 Belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000665 229.0
DPH3_k127_8356579_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000001783 156.0
DPH3_k127_8356579_2 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000001676 143.0
DPH3_k127_8356579_3 NnrU protein - - - 0.0000000000000000000000000529 117.0
DPH3_k127_8356579_4 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides - - - 0.000000000000000000000002836 111.0
DPH3_k127_8374951_0 Guanosine polyphosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000002454 228.0
DPH3_k127_8374951_1 - - - - 0.00000000000000000000000002499 112.0
DPH3_k127_8374951_2 - - - - 0.00000000000000001413 91.0
DPH3_k127_8374951_3 Transposase IS200 like K07491 - - 0.0002009 46.0
DPH3_k127_8394351_0 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 371.0
DPH3_k127_8394351_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002502 274.0
DPH3_k127_84025_0 Acyl-CoA dehydrogenase, N-terminal domain K11731 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 443.0
DPH3_k127_84025_1 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 365.0
DPH3_k127_84025_2 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000002924 265.0
DPH3_k127_84025_3 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000001149 151.0
DPH3_k127_8419873_0 flagellar basal-body rod protein FlgG K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
DPH3_k127_8419873_1 PFAM flagellar basal body rod protein K02392 - - 0.0000000000000000000000000003631 123.0
DPH3_k127_8419873_2 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000002638 86.0
DPH3_k127_8419873_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000001347 53.0
DPH3_k127_8421538_0 4Fe-4S dicluster domain - - - 1.111e-216 677.0
DPH3_k127_8421538_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 561.0
DPH3_k127_8421538_10 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000005482 151.0
DPH3_k127_8421538_11 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000002065 120.0
DPH3_k127_8421538_12 Ogr/Delta-like zinc finger - - - 0.000000000000000000000000073 109.0
DPH3_k127_8421538_13 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000002412 96.0
DPH3_k127_8421538_14 4Fe-4S dicluster domain - - - 0.0000000000007082 74.0
DPH3_k127_8421538_15 Arginyl tRNA synthetase N terminal domain K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000983 62.0
DPH3_k127_8421538_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 476.0
DPH3_k127_8421538_3 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 406.0
DPH3_k127_8421538_4 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 358.0
DPH3_k127_8421538_5 Uroporphyrinogen-III synthase HemD K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 290.0
DPH3_k127_8421538_6 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002162 252.0
DPH3_k127_8421538_7 - - - - 0.00000000000000000000000000000000000000000000003296 172.0
DPH3_k127_8421538_8 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.00000000000000000000000000000000000000000000004965 176.0
DPH3_k127_8421538_9 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.0000000000000000000000000000000000000000001443 161.0
DPH3_k127_8440284_0 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 406.0
DPH3_k127_8440284_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 283.0
DPH3_k127_8440284_2 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000008239 203.0
DPH3_k127_8440284_3 Altronate hydrolase K01685 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0008789,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575 4.2.1.7 0.00000000000000000006829 94.0
DPH3_k127_8493925_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 511.0
DPH3_k127_8493925_1 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 502.0
DPH3_k127_8493925_2 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000367 164.0
DPH3_k127_8493925_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000006239 133.0
DPH3_k127_8504827_0 response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000001522 241.0
DPH3_k127_8504827_1 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000115 137.0
DPH3_k127_8504827_2 VanZ like family - - - 0.000000004038 66.0
DPH3_k127_8515588_0 PFAM Sodium sulphate symporter K14445 - - 1.692e-224 706.0
DPH3_k127_8515588_1 PFAM CBS domain - - - 0.00000000000000000000000000000000004074 142.0
DPH3_k127_8515896_0 DeoC/LacD family aldolase K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 506.0
DPH3_k127_8515896_1 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.000000000000000000000000000000000000000000000000000000000000000000001816 241.0
DPH3_k127_8515896_2 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000003789 236.0
DPH3_k127_8536460_0 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 432.0
DPH3_k127_8536460_1 4Fe-4S binding domain - - - 0.0001207 47.0
DPH3_k127_855567_0 Glutamate synthase - - - 5.58e-205 672.0
DPH3_k127_855567_1 GXGXG motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 438.0
DPH3_k127_855567_2 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 452.0
DPH3_k127_855567_3 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 0.0000000000000000000000000000000000000000005151 158.0
DPH3_k127_855567_4 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.00000000000000000004038 96.0
DPH3_k127_8563896_0 Acyl-CoA dehydrogenase type 2 domain - - - 7.012e-225 702.0
DPH3_k127_8563896_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000002966 185.0
DPH3_k127_8563896_2 - - - - 0.00000000000000000003302 98.0
DPH3_k127_8563896_3 Glycosyl transferase family 2 K09931 - - 0.00000000000004256 73.0
DPH3_k127_857099_0 AMP-binding enzyme - - - 5.507e-217 692.0
DPH3_k127_857099_1 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 429.0
DPH3_k127_857099_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000001198 173.0
DPH3_k127_858106_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.129e-244 776.0
DPH3_k127_858106_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 557.0
DPH3_k127_858106_2 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 351.0
DPH3_k127_858106_3 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000149 250.0
DPH3_k127_858106_4 4 iron, 4 sulfur cluster binding - - - 0.000000000000000001698 87.0
DPH3_k127_8588524_0 NAD synthase K06864 - - 0.0000000000000000000000000000000000000000000000000008936 188.0
DPH3_k127_8588524_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000813 172.0
DPH3_k127_8588524_2 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000005939 132.0
DPH3_k127_8631998_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.0 1723.0
DPH3_k127_8643662_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 610.0
DPH3_k127_8643662_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 398.0
DPH3_k127_8643662_2 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 337.0
DPH3_k127_8643662_3 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000007067 163.0
DPH3_k127_8643662_4 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000001712 57.0
DPH3_k127_8644955_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.285e-236 739.0
DPH3_k127_8644955_1 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 523.0
DPH3_k127_8644955_2 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 446.0
DPH3_k127_8644955_3 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06131,K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 344.0
DPH3_k127_8645268_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000001266 229.0
DPH3_k127_8645268_1 - - - - 0.00000000000000002055 86.0
DPH3_k127_8645268_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000001636 63.0
DPH3_k127_8661990_0 lysine 2,3-aminomutase activity K01843,K19810 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 391.0
DPH3_k127_8661990_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 366.0
DPH3_k127_8661990_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 319.0
DPH3_k127_8661990_3 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000005485 236.0
DPH3_k127_8661990_4 CGGC - - - 0.0000000000000000000000000000000000000000000000000000003439 195.0
DPH3_k127_8661990_5 Dodecin K09165 - - 0.000000000000000000000005181 102.0
DPH3_k127_8671035_0 Memo-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 398.0
DPH3_k127_8671035_1 short-chain dehydrogenase reductase SDR K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000003985 265.0
DPH3_k127_8671035_2 Glycosyltransferase like family 2 - - - 0.0000000000409 65.0
DPH3_k127_867466_0 ABC transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 490.0
DPH3_k127_867466_1 ABC-type multidrug transport system ATPase and permease K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 306.0
DPH3_k127_867466_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000007226 90.0
DPH3_k127_8686438_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 458.0
DPH3_k127_8686438_1 TIGRFAM alpha-L-glutamate ligase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 394.0
DPH3_k127_8686438_2 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000002333 233.0
DPH3_k127_8686438_3 Putative ATP-dependant zinc protease - - - 0.0003912 43.0
DPH3_k127_8702675_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 3.641e-311 972.0
DPH3_k127_8716570_0 COG0277 FAD FMN-containing dehydrogenases K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000001034 104.0
DPH3_k127_8716570_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000002931 100.0
DPH3_k127_8749911_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0 1414.0
DPH3_k127_8749911_1 Ketoacyl-synthetase C-terminal extension - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003316 267.0
DPH3_k127_8755333_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 1.279e-244 771.0
DPH3_k127_8755333_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000008573 188.0
DPH3_k127_8755333_2 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000003148 170.0
DPH3_k127_8769225_0 AcrB/AcrD/AcrF family - - - 0.0 1314.0
DPH3_k127_8769225_1 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 367.0
DPH3_k127_8774609_0 Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001181 261.0
DPH3_k127_8774609_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000222 137.0
DPH3_k127_8774609_2 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000003289 106.0
DPH3_k127_8774609_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000001788 82.0
DPH3_k127_8816718_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 582.0
DPH3_k127_8816718_1 DNA topoisomerase (ATP-hydrolyzing) K02470,K02622 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000002338 196.0
DPH3_k127_8846610_0 PFAM Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000003054 219.0
DPH3_k127_8846610_1 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000007466 128.0
DPH3_k127_8878868_0 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 489.0
DPH3_k127_8878868_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 303.0
DPH3_k127_8878868_2 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008546 285.0
DPH3_k127_8878868_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000003809 241.0
DPH3_k127_8878868_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000001014 132.0
DPH3_k127_8878868_5 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000004619 100.0
DPH3_k127_8878868_6 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000009052 83.0
DPH3_k127_8889059_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 503.0
DPH3_k127_8889059_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000002006 216.0
DPH3_k127_8889059_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000505 203.0
DPH3_k127_8889059_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000002601 167.0
DPH3_k127_8889059_4 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.000000000000000000000000000000000000000003505 166.0
DPH3_k127_8889059_5 X-Pro dipeptidyl-peptidase (S15 family) K06889,K07397 - - 0.0000000000000000000000000000001024 134.0
DPH3_k127_889805_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 531.0
DPH3_k127_889805_1 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 417.0
DPH3_k127_889805_2 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000003126 217.0
DPH3_k127_889805_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000001262 158.0
DPH3_k127_889805_4 NMT1-like family K02051 - - 0.000000000000000000000000000000005648 136.0
DPH3_k127_889805_5 3-beta hydroxysteroid dehydrogenase isomerase K21793 - - 0.000000000000000000000000000006323 135.0
DPH3_k127_889805_6 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.000000000003416 68.0
DPH3_k127_8903893_0 PFAM AMP-dependent synthetase and ligase - - - 6.119e-195 632.0
DPH3_k127_8903893_1 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 374.0
DPH3_k127_8903893_2 PFAM NADH flavin oxidoreductase NADH oxidase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000014 285.0
DPH3_k127_8903893_3 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000003164 223.0
DPH3_k127_8903893_4 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000001259 207.0
DPH3_k127_8903893_5 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000007641 87.0
DPH3_k127_8905501_0 acetyl coenzyme A synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 304.0
DPH3_k127_8926940_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000006846 225.0
DPH3_k127_8926940_1 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000003061 69.0
DPH3_k127_8926940_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000127 64.0
DPH3_k127_8930408_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000537 190.0
DPH3_k127_8930408_1 Aminoglycoside phosphotransferase - - - 0.000000000000000000001809 97.0
DPH3_k127_8930408_2 LTXXQ motif family protein - - - 0.00000000000000000003891 97.0
DPH3_k127_8930408_3 - - - - 0.00000000001143 71.0
DPH3_k127_8957916_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1034.0
DPH3_k127_8957916_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000008808 141.0
DPH3_k127_8967934_0 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005608 289.0
DPH3_k127_8967934_1 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000785 274.0
DPH3_k127_8986405_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 424.0
DPH3_k127_8986405_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000005646 236.0
DPH3_k127_8986405_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000008649 132.0
DPH3_k127_8986405_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000006063 81.0
DPH3_k127_9049948_0 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 319.0
DPH3_k127_9049948_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000007251 163.0
DPH3_k127_9049948_2 Cytochrome c K02305 - - 0.00000000000000000000000022 119.0
DPH3_k127_9049948_3 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.000000000000000000000009693 107.0
DPH3_k127_9049948_4 Thrombospondin type 3 repeat - - - 0.000279 54.0
DPH3_k127_9054209_0 Lysin motif - - - 0.000000000000000000000000000000000000000000002939 178.0
DPH3_k127_9054209_1 Thioredoxin-like - - - 0.000000000000000000000000000000001674 136.0
DPH3_k127_9058388_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000001741 233.0
DPH3_k127_9058388_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000002191 163.0
DPH3_k127_9058388_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000001873 130.0
DPH3_k127_9058388_3 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000001012 106.0
DPH3_k127_9087687_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 466.0
DPH3_k127_9087687_1 acyl-CoA dehydrogenase K09456,K20035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 368.0
DPH3_k127_9087687_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000005071 186.0
DPH3_k127_9087687_3 - - - - 0.0000000000000862 81.0
DPH3_k127_9087687_4 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity - - - 0.0003288 48.0
DPH3_k127_9173130_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 495.0
DPH3_k127_9173130_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000001221 168.0
DPH3_k127_9173130_2 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000007123 128.0
DPH3_k127_919171_0 RNA binding S1 domain protein K06959 - - 2.616e-252 800.0
DPH3_k127_919171_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000001547 221.0
DPH3_k127_919171_2 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000039 104.0
DPH3_k127_9195464_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 470.0
DPH3_k127_9195464_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 385.0
DPH3_k127_9195464_2 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 336.0
DPH3_k127_9195464_3 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000005439 224.0
DPH3_k127_9195464_4 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000001417 174.0
DPH3_k127_9195464_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000000000001913 100.0
DPH3_k127_919664_0 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006261 285.0
DPH3_k127_919664_1 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008223 244.0
DPH3_k127_919664_2 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000002196 248.0
DPH3_k127_919664_3 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000165 160.0
DPH3_k127_919664_4 Electron transport complex protein RnfC K03615 - - 0.00000000000000000000000000000692 122.0
DPH3_k127_919664_5 4Fe-4S ferredoxin iron-sulfur binding domain protein K03616 - - 0.000134 44.0
DPH3_k127_9203730_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0000287,GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006438,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045903,GO:0046483,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0061475,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000112 6.1.1.9 0.0 1362.0
DPH3_k127_9203730_1 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 386.0
DPH3_k127_9203730_2 - - - - 0.0000000000009113 76.0
DPH3_k127_9221003_0 Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000004413 252.0
DPH3_k127_9221003_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000002773 155.0
DPH3_k127_9221003_2 PFAM thioesterase superfamily K02614 - - 0.00000000000003497 80.0
DPH3_k127_9221003_3 ATPase associated with various cellular activities - - - 0.000000000001553 77.0
DPH3_k127_9221003_4 GXGXG motif - - - 0.00006825 53.0
DPH3_k127_9227206_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 493.0
DPH3_k127_9227206_1 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 345.0
DPH3_k127_9227206_10 Lipopolysaccharide-assembly, LptC-related - - - 0.000001551 57.0
DPH3_k127_9227206_2 PFAM ABC transporter related K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 303.0
DPH3_k127_9227206_3 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009382 278.0
DPH3_k127_9227206_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000002018 180.0
DPH3_k127_9227206_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000003856 127.0
DPH3_k127_9227206_6 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000000000004581 112.0
DPH3_k127_9227206_7 PTS system fructose IIA component K02793 - 2.7.1.191 0.000000000000000000000000008275 115.0
DPH3_k127_9227206_8 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0051179,GO:0051234,GO:0071702 2.7.3.9 0.000000000001323 72.0
DPH3_k127_9227206_9 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000002188 73.0
DPH3_k127_9238829_0 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 327.0
DPH3_k127_9238829_1 - - - - 0.000000000000000000000000003896 113.0
DPH3_k127_9238829_2 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.00000000007037 64.0
DPH3_k127_9238829_3 PFAM AsmA family K07289 - - 0.0004141 53.0
DPH3_k127_9243860_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 401.0
DPH3_k127_9243860_1 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000003363 50.0
DPH3_k127_9247507_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 413.0
DPH3_k127_9247507_1 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000001668 263.0
DPH3_k127_9247507_2 NUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000003783 190.0
DPH3_k127_9270465_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 2.7.7.42,2.7.7.89 1.012e-292 944.0
DPH3_k127_9270465_1 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 359.0
DPH3_k127_9270465_2 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04751 - - 0.00000000000000000000000000000000000000000000006996 174.0
DPH3_k127_9270465_3 Oxidoreductase family, C-terminal alpha/beta domain K00010,K16044 - 1.1.1.18,1.1.1.369,1.1.1.371 0.0000000000000000000000000000000000000006336 157.0
DPH3_k127_9319336_0 ATP synthase alpha beta family, nucleotide-binding domain K02412,K03224 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 500.0
DPH3_k127_9319336_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007052 269.0
DPH3_k127_9319336_2 PFAM Flagellar assembly protein FliH K02411 - - 0.00000000001936 72.0
DPH3_k127_9319336_3 Flagellar export protein FliJ K02413 - - 0.0003791 49.0
DPH3_k127_9323157_0 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 383.0
DPH3_k127_9323157_1 Pilus assembly protein, PilP K02665 - - 0.0000001216 63.0
DPH3_k127_9323157_2 PFAM Pilus assembly protein PilO K02664 - - 0.000001389 53.0
DPH3_k127_9323157_3 Type IV Pilus-assembly protein W K02672 - - 0.000003464 56.0
DPH3_k127_9323157_5 Prokaryotic N-terminal methylation motif K02671 - - 0.0009203 49.0
DPH3_k127_9332757_0 PFAM AAA ATPase central domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 403.0
DPH3_k127_9332757_1 VWA containing CoxE family protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000028 228.0
DPH3_k127_9332757_2 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000003386 107.0
DPH3_k127_9350039_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 312.0
DPH3_k127_9350039_1 Cellulose biosynthesis protein BcsQ K04562 - - 0.00000000000000000000000000000000000000000000000000000000000001864 224.0
DPH3_k127_9350039_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.000000000000000000000000000000000000000000000000000004742 199.0
DPH3_k127_9350039_3 flagellar biosynthesis protein FlhF K02404 - - 0.0000000000000000000000000000000000007994 152.0
DPH3_k127_9351868_0 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000003577 193.0
DPH3_k127_9351868_1 radical SAM domain protein - - - 0.000000000000000000000000001426 124.0
DPH3_k127_9355621_0 TIGRFAM cytochrome d oxidase, subunit II (cydB) K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 469.0
DPH3_k127_9355621_1 PFAM metal-dependent phosphohydrolase HD sub - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 318.0
DPH3_k127_9355621_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 314.0
DPH3_k127_9359175_0 CO dehydrogenase/acetyl-CoA synthase delta subunit K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000653 194.0
DPH3_k127_9359175_1 PIN domain - - - 0.0000000000000000000000000000000000000000006744 160.0
DPH3_k127_9359175_3 ubiE/COQ5 methyltransferase family K03183,K05929 - 2.1.1.103,2.1.1.163,2.1.1.201 0.0000000002919 64.0
DPH3_k127_9377396_0 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000001033 152.0
DPH3_k127_9377396_1 GDSL-like Lipase/Acylhydrolase - - - 0.00000009404 62.0
DPH3_k127_9377966_0 Flp pilus assembly protein ATPase CpaF K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 288.0
DPH3_k127_9377966_1 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000001525 171.0
DPH3_k127_9377966_2 flp pilus assembly protein K12510 - - 0.0000000000000000000000000000000004493 148.0
DPH3_k127_9377966_3 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000002627 108.0
DPH3_k127_9377966_4 Forkhead associated domain - - - 0.00001016 52.0
DPH3_k127_9401657_0 - - - - 0.0000000000000000000000000005626 127.0
DPH3_k127_9401657_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000000000005683 110.0
DPH3_k127_9401657_2 Amino acid permease - - - 0.0000000000000000000001115 100.0
DPH3_k127_9401657_3 - - - - 0.00001508 51.0
DPH3_k127_9418922_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 377.0
DPH3_k127_9421186_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000943 274.0
DPH3_k127_9421186_1 Elongation factor Tu domain 2 K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 251.0
DPH3_k127_9421186_2 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003991 250.0
DPH3_k127_9421186_3 Zincin-like metallopeptidase - - - 0.000000000000000000000002368 107.0
DPH3_k127_9422327_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 610.0
DPH3_k127_9422327_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 447.0
DPH3_k127_9422327_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 307.0
DPH3_k127_9422327_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000003043 189.0
DPH3_k127_9437236_0 Conserved carboxylase domain K01571,K01960 - 4.1.1.3,6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009382 412.0
DPH3_k127_9437236_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 395.0
DPH3_k127_9437236_2 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 295.0
DPH3_k127_9437236_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000008427 197.0
DPH3_k127_9437236_4 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000417 168.0
DPH3_k127_9437236_5 Catalyzes the conversion of acetoacetate to acetone and carbon dioxide K01574 - 4.1.1.4 0.0000000000000000000000000000000000002789 151.0
DPH3_k127_9437236_6 PFAM Membrane protein of K08972 - - 0.0000000000000000000000000002571 117.0
DPH3_k127_9437236_7 - - - - 0.0000000000001197 79.0
DPH3_k127_94684_0 L-glutamate biosynthetic process K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1922.0
DPH3_k127_94684_1 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 481.0
DPH3_k127_94684_2 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 372.0
DPH3_k127_94684_3 Radical SAM superfamily K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001813 277.0
DPH3_k127_94684_4 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.000000000000000000000000000000000000000000000000000002898 204.0
DPH3_k127_94684_5 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000004514 203.0
DPH3_k127_94684_6 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000001983 131.0
DPH3_k127_94684_7 Protein conserved in bacteria - - - 0.000000007627 66.0
DPH3_k127_9480028_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 328.0
DPH3_k127_9480028_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000008169 237.0
DPH3_k127_9480028_2 Histidine kinase K00936,K07315 - 2.7.13.3,3.1.3.3 0.0000000000000000000000000000000000000000006571 177.0
DPH3_k127_9480028_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000001647 105.0
DPH3_k127_9480028_4 response regulator - - - 0.000000000000000000006168 108.0
DPH3_k127_9480028_5 PFAM ABC transporter related K01996 - - 0.0000000000000004081 78.0
DPH3_k127_9491641_1 - - - - 0.0000000000000000000000000000000000000007986 154.0
DPH3_k127_9491641_2 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000001823 112.0
DPH3_k127_9491641_3 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000003503 67.0
DPH3_k127_9499252_0 Cytochrome C biogenesis protein transmembrane region K06196,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000001352 234.0
DPH3_k127_9499252_1 membrane lipoprotein lipid attachment site K07337 - - 0.000000000000000000000000000000000000000000000003348 187.0
DPH3_k127_9499252_2 conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000163 180.0
DPH3_k127_9499252_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000002791 126.0
DPH3_k127_9499252_4 Protein of unknown function (DUF1425) - - - 0.0000000000001259 77.0
DPH3_k127_9500216_0 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 425.0
DPH3_k127_9500216_1 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 298.0
DPH3_k127_9500216_2 COG0183 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000003903 174.0
DPH3_k127_9500216_3 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.000000000001928 79.0
DPH3_k127_9538586_0 Glycosyl transferase 4-like domain K13668 - 2.4.1.346 0.000000000000000000000000000000000000000002632 177.0
DPH3_k127_9538586_1 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000009016 124.0
DPH3_k127_9538684_0 4Fe-4S single cluster domain K06871 - - 0.0000000000000000000000000000000000000000000000001296 187.0
DPH3_k127_9538684_1 PFAM Prenyltransferase squalene oxidase K06045,K17811 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009267,GO:0009605,GO:0009607,GO:0009975,GO:0009987,GO:0009991,GO:0010350,GO:0016101,GO:0016102,GO:0016114,GO:0016853,GO:0016872,GO:0019637,GO:0031667,GO:0031668,GO:0031669,GO:0033385,GO:0033554,GO:0035439,GO:0035440,GO:0042594,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071496,GO:0071704,GO:0075136,GO:1901576 4.2.1.129,5.4.99.17,5.5.1.16 0.00000000000002127 86.0
DPH3_k127_9538684_2 - - - - 0.0001615 55.0
DPH3_k127_954813_0 PFAM ATPase BadF BadG BcrA BcrD type K04114 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001993 284.0
DPH3_k127_954813_1 PFAM ATPase BadF BadG BcrA BcrD type K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000002602 217.0
DPH3_k127_954813_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000003301 98.0
DPH3_k127_9575353_0 proline dipeptidase activity K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 515.0
DPH3_k127_9575353_1 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009711 266.0
DPH3_k127_9575353_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000008692 182.0
DPH3_k127_9575353_3 Sterol carrier protein - - - 0.00000000000000000000000000000000000001257 148.0
DPH3_k127_9577996_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 548.0
DPH3_k127_9624413_0 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000039 256.0
DPH3_k127_9624413_1 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.00000000000000000000000000000000000001856 151.0
DPH3_k127_9655177_0 PFAM response regulator receiver K07657,K07659,K07664,K11329 - - 0.00000000000000000000000000000000000000000000000000000000000000000012 239.0
DPH3_k127_9655177_1 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000001576 232.0
DPH3_k127_9655177_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000009366 51.0
DPH3_k127_965790_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 308.0
DPH3_k127_965790_1 Biotin-protein ligase, N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000001413 236.0
DPH3_k127_965790_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000002679 109.0
DPH3_k127_965790_3 PFAM Transcriptional regulator PadR-like family - - - 0.0000000000000000000001574 106.0
DPH3_k127_9666374_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 315.0
DPH3_k127_9671811_0 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000003746 194.0
DPH3_k127_9671811_1 nuclease (RecB family) - - - 0.000000000000000000008628 98.0
DPH3_k127_9671811_2 gas vesicle protein - - - 0.0000000000001616 72.0
DPH3_k127_9671811_3 gas vesicle protein - - - 0.000000000001839 70.0
DPH3_k127_9685662_0 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 613.0
DPH3_k127_9685662_1 TIGRFAM LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 378.0
DPH3_k127_9685662_2 - - - - 0.0000004765 59.0
DPH3_k127_9704406_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 3.273e-250 787.0
DPH3_k127_9704406_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 4.384e-210 661.0
DPH3_k127_9704406_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000001325 252.0
DPH3_k127_9704406_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000004188 179.0
DPH3_k127_9704406_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000001223 140.0
DPH3_k127_9704406_5 nucleic-acid-binding protein containing a Zn-ribbon - - - 0.0000000000001243 77.0
DPH3_k127_9712237_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000005866 265.0
DPH3_k127_9712237_1 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002571 239.0
DPH3_k127_9712237_2 - - - - 0.000000000000000996 83.0
DPH3_k127_9712237_3 Domain of unknown function (DUF1731) K07071 - - 0.000000000983 62.0
DPH3_k127_9753163_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 517.0
DPH3_k127_9753163_1 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000212 217.0
DPH3_k127_9753163_2 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000002482 184.0
DPH3_k127_9753848_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002184 280.0
DPH3_k127_9753848_1 ATPase MipZ K03496 - - 0.000000000000000000000000000000000000000000000000000000001281 213.0
DPH3_k127_9758102_1 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000001739 134.0
DPH3_k127_9758102_2 kinase activity - - - 0.0000000000000000000004199 107.0
DPH3_k127_9758102_3 ABC-type multidrug transport system ATPase and permease K06147,K11085 - - 0.0000002718 59.0
DPH3_k127_9788373_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000009583 237.0
DPH3_k127_9788373_1 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000002153 119.0
DPH3_k127_9791379_0 FAD dependent oxidoreductase K05898 - 1.3.99.4 4.774e-201 641.0
DPH3_k127_9791379_1 FAD dependent oxidoreductase K16051 - 1.3.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 582.0
DPH3_k127_9791379_2 Protein of unknown function (DUF3604) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 408.0
DPH3_k127_9791379_3 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.000000000000000000000000000000000000000000000000006516 188.0
DPH3_k127_9791379_4 Monomethylamine methyltransferase MtmB K16176 - 2.1.1.248 0.000000000000000000000000000473 129.0
DPH3_k127_9791379_5 Bacterial regulatory proteins, tetR family - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000002563 78.0
DPH3_k127_9795939_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001316 250.0
DPH3_k127_9795939_1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity K00950,K13940 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3,4.1.2.25 0.0000000000000000000000000002213 124.0
DPH3_k127_9795939_2 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.000000000000000000000000001194 115.0
DPH3_k127_9795939_3 Lipopolysaccharide assembly protein A domain - - - 0.0002551 49.0
DPH3_k127_979751_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 547.0
DPH3_k127_979751_1 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 312.0
DPH3_k127_979751_2 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000000004807 107.0
DPH3_k127_9799679_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000002667 204.0
DPH3_k127_9810230_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 392.0
DPH3_k127_9810230_1 phosphoesterase RecJ domain protein K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000001167 215.0
DPH3_k127_9810230_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000001324 160.0
DPH3_k127_9810230_3 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000004049 106.0
DPH3_k127_9810230_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000001501 93.0
DPH3_k127_9810230_5 Belongs to the Fur family K03711 - - 0.0000000000000000002434 93.0
DPH3_k127_9814690_0 Thiolase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 610.0
DPH3_k127_9814690_1 phenylacetate-CoA ligase Coenzyme F390 synthetase-like protein K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 462.0
DPH3_k127_9814690_2 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000006789 87.0
DPH3_k127_9814690_3 SnoaL-like domain - - - 0.00000000000000002503 88.0
DPH3_k127_981743_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.419e-199 629.0
DPH3_k127_981743_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 577.0
DPH3_k127_981743_2 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 472.0
DPH3_k127_981743_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 372.0
DPH3_k127_981743_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000002667 158.0
DPH3_k127_9818348_0 DNA primase activity K02314,K02316,K17680 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 481.0
DPH3_k127_9824883_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.028e-247 768.0
DPH3_k127_9824883_1 Transposase - - - 1.697e-221 702.0
DPH3_k127_9824883_2 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 531.0
DPH3_k127_9824883_3 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001414 243.0
DPH3_k127_9824883_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000003151 115.0
DPH3_k127_9824883_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000121 84.0
DPH3_k127_9827196_0 YXWGXW repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 301.0
DPH3_k127_9827196_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009939 271.0
DPH3_k127_9827196_3 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000008574 119.0
DPH3_k127_9827196_4 Metallo-beta-lactamase superfamily - - - 0.00000000000005362 72.0
DPH3_k127_9827196_5 - - - - 0.000000001229 67.0
DPH3_k127_9827196_6 amine dehydrogenase activity - - - 0.000064 54.0
DPH3_k127_9828283_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 583.0
DPH3_k127_9855863_0 AhpC/TSA family - - - 0.000000000000003484 84.0
DPH3_k127_9860535_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 450.0
DPH3_k127_9860535_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 384.0
DPH3_k127_9860535_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 370.0
DPH3_k127_9860535_3 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000738 340.0
DPH3_k127_9871203_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 305.0
DPH3_k127_9871203_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000006177 240.0
DPH3_k127_9871203_2 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000008024 105.0
DPH3_k127_9877590_0 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 534.0
DPH3_k127_9885914_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 599.0
DPH3_k127_9885914_1 Domain of unknown function (DUF4382) - - - 0.0005328 49.0
DPH3_k127_9901612_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 519.0
DPH3_k127_9901612_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000001212 166.0
DPH3_k127_9901612_2 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000009374 68.0
DPH3_k127_9919534_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 397.0
DPH3_k127_9919534_1 Molydopterin dinucleotide binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002733 261.0
DPH3_k127_9919534_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000004015 195.0
DPH3_k127_9919534_3 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000001067 145.0
DPH3_k127_9919534_4 Universal stress protein - - - 0.00000000000000000000000000001211 122.0
DPH3_k127_9919534_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000156 108.0
DPH3_k127_9919534_6 php family - - - 0.000000004568 64.0
DPH3_k127_9919534_7 Helix-turn-helix domain - - - 0.00001123 50.0
DPH3_k127_9982975_0 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000001043 228.0
DPH3_k127_998647_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 397.0
DPH3_k127_9989514_0 Cobyrinic acid ac-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 331.0
DPH3_k127_9989514_1 Cobyrinic acid ac-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000005592 228.0
DPH3_k127_9990529_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 325.0
DPH3_k127_9990529_1 4Fe-4S dicluster domain - - - 0.00000008825 55.0